View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2230_low_11 (Length: 256)

Name: NF2230_low_11
Description: NF2230
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2230_low_11
NF2230_low_11
[»] scaffold0222 (2 HSPs)
scaffold0222 (51-241)||(21048-21238)
scaffold0222 (51-237)||(371-557)
[»] chr2 (15 HSPs)
chr2 (51-232)||(23274429-23274610)
chr2 (81-237)||(19716438-19716594)
chr2 (81-237)||(19721001-19721157)
chr2 (100-238)||(23097438-23097576)
chr2 (147-246)||(28350807-28350906)
chr2 (72-219)||(20848446-20848592)
chr2 (147-237)||(21901469-21901559)
chr2 (81-232)||(12577219-12577370)
chr2 (146-208)||(22462931-22462993)
chr2 (87-208)||(24657108-24657229)
chr2 (81-208)||(24704932-24705059)
chr2 (146-208)||(11351161-11351223)
chr2 (143-237)||(24817261-24817355)
chr2 (146-207)||(23205245-23205306)
chr2 (146-207)||(23676849-23676910)
[»] scaffold0317 (1 HSPs)
scaffold0317 (51-237)||(2865-3051)
[»] chr7 (23 HSPs)
chr7 (51-237)||(13676646-13676832)
chr7 (100-238)||(11385296-11385434)
chr7 (81-232)||(14283247-14283398)
chr7 (51-232)||(15099476-15099657)
chr7 (66-246)||(19150221-19150401)
chr7 (66-246)||(20749620-20749800)
chr7 (100-232)||(13965541-13965673)
chr7 (72-232)||(26091671-26091831)
chr7 (72-232)||(40924690-40924850)
chr7 (51-237)||(12459823-12460009)
chr7 (72-232)||(26115463-26115623)
chr7 (87-238)||(12712530-12712681)
chr7 (72-226)||(49155517-49155671)
chr7 (66-237)||(16947340-16947511)
chr7 (81-238)||(14261113-14261270)
chr7 (72-246)||(13024560-13024734)
chr7 (81-224)||(21755637-21755780)
chr7 (145-237)||(12203668-12203760)
chr7 (81-232)||(14144886-14145037)
chr7 (87-237)||(12798372-12798519)
chr7 (81-232)||(18050826-18050977)
chr7 (143-244)||(15627810-15627911)
chr7 (138-208)||(11984273-11984343)
[»] scaffold0010 (4 HSPs)
scaffold0010 (51-246)||(39208-39403)
scaffold0010 (66-207)||(180753-180894)
scaffold0010 (146-208)||(14753-14815)
scaffold0010 (146-200)||(5244-5298)
[»] scaffold0034 (3 HSPs)
scaffold0034 (51-241)||(1832-2022)
scaffold0034 (66-232)||(11795-11961)
scaffold0034 (129-237)||(70684-70792)
[»] chr3 (36 HSPs)
chr3 (51-241)||(12357632-12357822)
chr3 (81-241)||(14290637-14290797)
chr3 (51-231)||(18131462-18131642)
chr3 (100-237)||(31941786-31941923)
chr3 (100-237)||(31692294-31692431)
chr3 (72-232)||(28757174-28757334)
chr3 (72-232)||(47126799-47126959)
chr3 (54-232)||(17494484-17494661)
chr3 (100-232)||(17189257-17189389)
chr3 (81-241)||(35983045-35983205)
chr3 (100-237)||(24190187-24190324)
chr3 (72-232)||(10408823-10408983)
chr3 (81-232)||(16384486-16384637)
chr3 (105-232)||(16831642-16831769)
chr3 (66-237)||(16825388-16825559)
chr3 (82-232)||(12181209-12181359)
chr3 (51-164)||(11949107-11949220)
chr3 (72-246)||(16326807-16326983)
chr3 (147-246)||(15008684-15008783)
chr3 (147-232)||(2037026-2037111)
chr3 (147-232)||(2040767-2040852)
chr3 (147-232)||(14039676-14039761)
chr3 (81-237)||(11958290-11958446)
chr3 (129-232)||(13317683-13317786)
chr3 (145-232)||(15230531-15230618)
chr3 (145-232)||(15236399-15236486)
chr3 (81-232)||(8744504-8744655)
chr3 (81-232)||(13944888-13945039)
chr3 (81-238)||(12857604-12857761)
chr3 (146-232)||(12843228-12843314)
chr3 (126-189)||(10417202-10417265)
chr3 (82-208)||(12501788-12501914)
chr3 (146-208)||(16804096-16804158)
chr3 (146-208)||(23079166-23079228)
chr3 (138-208)||(23414939-23415009)
chr3 (153-237)||(19727686-19727770)
[»] chr1 (18 HSPs)
chr1 (51-246)||(20832844-20833039)
chr1 (51-246)||(19857525-19857720)
chr1 (81-238)||(21742504-21742661)
chr1 (81-237)||(21738989-21739145)
chr1 (100-232)||(20297683-20297815)
chr1 (81-237)||(21961308-21961464)
chr1 (72-232)||(38909784-38909944)
chr1 (72-232)||(48426145-48426305)
chr1 (66-237)||(24096568-24096739)
chr1 (72-232)||(37680321-37680481)
chr1 (72-237)||(52989013-52989178)
chr1 (72-246)||(31536941-31537115)
chr1 (100-232)||(20074667-20074799)
chr1 (81-232)||(22015703-22015854)
chr1 (147-246)||(18273114-18273213)
chr1 (66-237)||(20853713-20853884)
chr1 (143-200)||(16379406-16379463)
chr1 (146-208)||(21228538-21228600)
[»] chr6 (22 HSPs)
chr6 (51-241)||(24515436-24515626)
chr6 (51-237)||(14376942-14377128)
chr6 (48-246)||(18797756-18797954)
chr6 (54-244)||(19456095-19456285)
chr6 (54-244)||(19466240-19466430)
chr6 (100-238)||(21567016-21567154)
chr6 (81-232)||(19438101-19438252)
chr6 (72-232)||(24367490-24367650)
chr6 (51-237)||(10465874-10466060)
chr6 (147-237)||(8720731-8720821)
chr6 (147-237)||(16813805-16813895)
chr6 (87-204)||(34642645-34642762)
chr6 (147-246)||(19486311-19486410)
chr6 (150-239)||(21474768-21474857)
chr6 (159-241)||(25771021-25771103)
chr6 (146-246)||(30678041-30678141)
chr6 (160-246)||(25958770-25958856)
chr6 (126-184)||(15462480-15462538)
chr6 (146-232)||(23081587-23081673)
chr6 (90-203)||(27559029-27559142)
chr6 (66-237)||(20010527-20010699)
chr6 (146-208)||(21764976-21765038)
[»] scaffold0367 (1 HSPs)
scaffold0367 (51-246)||(8896-9091)
[»] scaffold0004 (3 HSPs)
scaffold0004 (75-246)||(319501-319672)
scaffold0004 (51-246)||(325941-326135)
scaffold0004 (147-237)||(200361-200451)
[»] chr8 (15 HSPs)
chr8 (51-246)||(22027595-22027790)
chr8 (105-232)||(16268553-16268680)
chr8 (72-232)||(28984203-28984363)
chr8 (81-232)||(22054164-22054315)
chr8 (66-237)||(31413856-31414027)
chr8 (147-246)||(6606784-6606883)
chr8 (148-237)||(20391454-20391543)
chr8 (87-232)||(19985487-19985632)
chr8 (100-241)||(21928748-21928889)
chr8 (81-229)||(22374170-22374318)
chr8 (51-237)||(29300750-29300936)
chr8 (146-209)||(21671881-21671944)
chr8 (146-208)||(22043193-22043255)
chr8 (146-208)||(30310497-30310559)
chr8 (146-178)||(22421276-22421308)
[»] scaffold0664 (1 HSPs)
scaffold0664 (81-246)||(7302-7467)
[»] chr4 (21 HSPs)
chr4 (81-237)||(16150871-16151027)
chr4 (81-237)||(16155017-16155173)
chr4 (72-232)||(7357493-7357653)
chr4 (51-232)||(18259646-18259827)
chr4 (72-232)||(3261680-3261840)
chr4 (81-231)||(44658753-44658903)
chr4 (81-237)||(20893266-20893422)
chr4 (54-232)||(15266984-15267162)
chr4 (72-232)||(29450423-29450583)
chr4 (100-237)||(11204113-11204250)
chr4 (82-238)||(15073595-15073751)
chr4 (82-237)||(14993248-14993403)
chr4 (147-246)||(8708978-8709077)
chr4 (81-232)||(51603678-51603829)
chr4 (81-232)||(53750356-53750507)
chr4 (51-237)||(27903590-27903776)
chr4 (105-248)||(13879368-13879511)
chr4 (146-246)||(14697401-14697501)
chr4 (146-209)||(8336-8399)
chr4 (151-209)||(15685-15743)
chr4 (146-208)||(18224123-18224185)
[»] scaffold0167 (1 HSPs)
scaffold0167 (51-237)||(5287-5473)
[»] scaffold0706 (1 HSPs)
scaffold0706 (51-246)||(5084-5279)
[»] scaffold0011 (2 HSPs)
scaffold0011 (51-238)||(153726-153913)
scaffold0011 (146-200)||(23454-23508)
[»] scaffold0348 (2 HSPs)
scaffold0348 (81-246)||(4724-4889)
scaffold0348 (88-244)||(17361-17517)
[»] scaffold0243 (1 HSPs)
scaffold0243 (51-246)||(9647-9842)
[»] scaffold0020 (2 HSPs)
scaffold0020 (81-232)||(98472-98623)
scaffold0020 (81-238)||(176251-176408)
[»] scaffold0017 (2 HSPs)
scaffold0017 (81-232)||(4342-4493)
scaffold0017 (90-208)||(16979-17097)
[»] scaffold1032 (1 HSPs)
scaffold1032 (54-232)||(704-882)
[»] scaffold0156 (1 HSPs)
scaffold0156 (51-237)||(37173-37359)
[»] scaffold0235 (2 HSPs)
scaffold0235 (51-246)||(8337-8532)
scaffold0235 (51-246)||(18551-18746)
[»] scaffold0106 (1 HSPs)
scaffold0106 (51-246)||(34571-34766)
[»] scaffold1299 (1 HSPs)
scaffold1299 (100-238)||(1731-1869)
[»] scaffold0476 (1 HSPs)
scaffold0476 (100-246)||(420-566)
[»] scaffold0420 (1 HSPs)
scaffold0420 (66-239)||(8863-9036)
[»] scaffold0074 (1 HSPs)
scaffold0074 (51-232)||(15306-15487)
[»] scaffold0058 (1 HSPs)
scaffold0058 (51-244)||(22356-22549)
[»] scaffold1426 (1 HSPs)
scaffold1426 (72-232)||(1496-1656)
[»] scaffold0335 (1 HSPs)
scaffold0335 (81-237)||(4188-4344)
[»] chr5 (24 HSPs)
chr5 (51-231)||(23563237-23563417)
chr5 (100-232)||(20345450-20345582)
chr5 (100-232)||(25851240-25851372)
chr5 (66-237)||(23077968-23078139)
chr5 (72-237)||(22505819-22505984)
chr5 (100-232)||(14884059-14884191)
chr5 (147-246)||(23669847-23669946)
chr5 (147-232)||(16258104-16258189)
chr5 (147-232)||(22591823-22591908)
chr5 (147-232)||(22595378-22595463)
chr5 (146-237)||(21870341-21870432)
chr5 (146-237)||(21874621-21874712)
chr5 (81-232)||(17266402-17266553)
chr5 (149-246)||(21983231-21983328)
chr5 (149-237)||(21561088-21561176)
chr5 (150-246)||(43122685-43122781)
chr5 (66-237)||(22465084-22465255)
chr5 (66-189)||(28892053-28892176)
chr5 (146-208)||(18782346-18782408)
chr5 (146-232)||(26735796-26735882)
chr5 (126-207)||(20824647-20824728)
chr5 (143-244)||(21631455-21631556)
chr5 (146-246)||(23474426-23474526)
chr5 (105-189)||(20779086-20779170)
[»] scaffold0035 (1 HSPs)
scaffold0035 (54-232)||(6042-6220)
[»] scaffold0029 (2 HSPs)
scaffold0029 (52-238)||(115797-115983)
scaffold0029 (126-207)||(93808-93889)
[»] scaffold0266 (1 HSPs)
scaffold0266 (81-238)||(16901-17058)
[»] scaffold0114 (1 HSPs)
scaffold0114 (81-246)||(40322-40487)
[»] scaffold0056 (1 HSPs)
scaffold0056 (51-232)||(772-953)
[»] scaffold2062 (1 HSPs)
scaffold2062 (54-238)||(755-939)
[»] scaffold1433 (1 HSPs)
scaffold1433 (81-241)||(1191-1351)
[»] scaffold1056 (1 HSPs)
scaffold1056 (81-241)||(1984-2144)
[»] scaffold0404 (1 HSPs)
scaffold0404 (81-241)||(8008-8168)
[»] scaffold0203 (1 HSPs)
scaffold0203 (51-211)||(764-924)
[»] scaffold0076 (1 HSPs)
scaffold0076 (81-237)||(53307-53463)
[»] scaffold0041 (1 HSPs)
scaffold0041 (72-232)||(41990-42150)
[»] scaffold0023 (2 HSPs)
scaffold0023 (81-237)||(164285-164441)
scaffold0023 (146-232)||(43342-43428)
[»] scaffold0072 (1 HSPs)
scaffold0072 (51-246)||(54281-54476)
[»] scaffold0146 (1 HSPs)
scaffold0146 (51-232)||(173-354)
[»] scaffold0067 (4 HSPs)
scaffold0067 (81-238)||(64485-64642)
scaffold0067 (66-232)||(29873-30039)
scaffold0067 (81-238)||(49063-49220)
scaffold0067 (81-238)||(58097-58254)
[»] scaffold0001 (1 HSPs)
scaffold0001 (100-237)||(514237-514374)
[»] scaffold0523 (2 HSPs)
scaffold0523 (81-237)||(5704-5860)
scaffold0523 (90-232)||(11632-11774)
[»] scaffold0046 (1 HSPs)
scaffold0046 (81-241)||(70372-70532)
[»] scaffold1530 (1 HSPs)
scaffold1530 (114-237)||(801-924)
[»] scaffold2165 (1 HSPs)
scaffold2165 (72-237)||(687-852)
[»] scaffold0276 (1 HSPs)
scaffold0276 (72-232)||(23812-23972)
[»] scaffold0118 (1 HSPs)
scaffold0118 (72-232)||(716-876)
[»] scaffold0104 (1 HSPs)
scaffold0104 (81-241)||(43299-43459)
[»] scaffold0054 (1 HSPs)
scaffold0054 (82-246)||(63394-63558)
[»] scaffold0026 (1 HSPs)
scaffold0026 (82-241)||(51916-52075)
[»] scaffold0009 (2 HSPs)
scaffold0009 (66-237)||(251868-252039)
scaffold0009 (146-208)||(229765-229827)
[»] scaffold0005 (1 HSPs)
scaffold0005 (87-238)||(263496-263647)
[»] scaffold1517 (1 HSPs)
scaffold1517 (51-237)||(1371-1557)
[»] scaffold0765 (1 HSPs)
scaffold0765 (81-246)||(6132-6297)
[»] scaffold0108 (1 HSPs)
scaffold0108 (51-232)||(50339-50520)
[»] scaffold0751 (1 HSPs)
scaffold0751 (81-237)||(5445-5600)
[»] scaffold0151 (1 HSPs)
scaffold0151 (88-232)||(431-575)
[»] scaffold0053 (2 HSPs)
scaffold0053 (81-237)||(62656-62812)
scaffold0053 (100-208)||(65211-65319)
[»] scaffold0239 (1 HSPs)
scaffold0239 (81-232)||(9676-9827)
[»] scaffold0003 (2 HSPs)
scaffold0003 (87-238)||(203651-203802)
scaffold0003 (146-206)||(424637-424697)
[»] scaffold1845 (1 HSPs)
scaffold1845 (123-237)||(1188-1302)
[»] scaffold0310 (1 HSPs)
scaffold0310 (51-237)||(11211-11397)
[»] scaffold0261 (2 HSPs)
scaffold0261 (51-188)||(12345-12482)
scaffold0261 (51-188)||(20525-20662)
[»] scaffold0102 (2 HSPs)
scaffold0102 (100-237)||(42981-43118)
scaffold0102 (146-208)||(50258-50320)
[»] scaffold0190 (1 HSPs)
scaffold0190 (90-237)||(30210-30357)
[»] scaffold0434 (1 HSPs)
scaffold0434 (146-238)||(5785-5877)
[»] scaffold0708 (1 HSPs)
scaffold0708 (72-246)||(5020-5194)
[»] scaffold0068 (1 HSPs)
scaffold0068 (100-237)||(66992-67129)
[»] scaffold0405 (1 HSPs)
scaffold0405 (81-239)||(5866-6024)
[»] scaffold0031 (1 HSPs)
scaffold0031 (129-238)||(115936-116045)
[»] scaffold0443 (1 HSPs)
scaffold0443 (72-196)||(12052-12176)
[»] scaffold0180 (1 HSPs)
scaffold0180 (122-237)||(30897-31012)
[»] scaffold0490 (1 HSPs)
scaffold0490 (167-237)||(3215-3285)
[»] scaffold0188 (1 HSPs)
scaffold0188 (159-237)||(33256-33334)
[»] scaffold0100 (1 HSPs)
scaffold0100 (146-246)||(16484-16584)
[»] scaffold0161 (1 HSPs)
scaffold0161 (145-232)||(36156-36243)
[»] scaffold0609 (2 HSPs)
scaffold0609 (147-237)||(1269-1359)
scaffold0609 (168-237)||(7908-7977)
[»] scaffold0130 (1 HSPs)
scaffold0130 (150-237)||(3776-3863)
[»] scaffold0088 (1 HSPs)
scaffold0088 (108-208)||(30225-30325)
[»] scaffold0040 (2 HSPs)
scaffold0040 (146-232)||(18174-18260)
scaffold0040 (146-209)||(110819-110882)
[»] scaffold0008 (2 HSPs)
scaffold0008 (146-232)||(139499-139585)
scaffold0008 (146-217)||(179-250)
[»] scaffold1914 (1 HSPs)
scaffold1914 (105-206)||(1145-1246)
[»] scaffold0192 (1 HSPs)
scaffold0192 (145-238)||(29855-29948)
[»] scaffold0509 (1 HSPs)
scaffold0509 (151-203)||(12162-12214)
[»] scaffold0270 (2 HSPs)
scaffold0270 (146-246)||(7202-7302)
scaffold0270 (146-246)||(14332-14432)
[»] scaffold0529 (1 HSPs)
scaffold0529 (143-246)||(5414-5517)
[»] scaffold0042 (1 HSPs)
scaffold0042 (143-246)||(26678-26781)
[»] scaffold2059 (1 HSPs)
scaffold2059 (146-232)||(658-744)
[»] scaffold0518 (1 HSPs)
scaffold0518 (192-246)||(2206-2260)
[»] scaffold0044 (1 HSPs)
scaffold0044 (146-208)||(17489-17551)
[»] scaffold0019 (1 HSPs)
scaffold0019 (146-208)||(171447-171509)
[»] scaffold0006 (1 HSPs)
scaffold0006 (152-209)||(104561-104618)
[»] scaffold1220 (1 HSPs)
scaffold1220 (82-178)||(1-97)
[»] scaffold0865 (1 HSPs)
scaffold0865 (150-238)||(1155-1243)
[»] scaffold0133 (1 HSPs)
scaffold0133 (150-238)||(28168-28256)
[»] scaffold0605 (1 HSPs)
scaffold0605 (126-237)||(1589-1700)
[»] scaffold0309 (1 HSPs)
scaffold0309 (81-136)||(12991-13046)
[»] scaffold0075 (2 HSPs)
scaffold0075 (146-209)||(48059-48122)
scaffold0075 (151-209)||(55383-55441)
[»] scaffold0293 (1 HSPs)
scaffold0293 (146-200)||(15739-15793)
[»] scaffold0289 (1 HSPs)
scaffold0289 (146-208)||(117-179)
[»] scaffold0165 (1 HSPs)
scaffold0165 (195-241)||(12322-12368)
[»] scaffold0018 (1 HSPs)
scaffold0018 (143-237)||(9235-9329)
[»] scaffold0012 (1 HSPs)
scaffold0012 (146-200)||(216341-216395)
[»] scaffold0413 (1 HSPs)
scaffold0413 (146-178)||(3871-3903)
[»] scaffold0357 (1 HSPs)
scaffold0357 (146-178)||(17920-17952)
[»] scaffold0331 (1 HSPs)
scaffold0331 (143-199)||(14901-14957)
[»] scaffold0282 (1 HSPs)
scaffold0282 (146-198)||(13397-13449)
[»] scaffold0181 (1 HSPs)
scaffold0181 (90-178)||(28871-28959)
[»] scaffold0148 (1 HSPs)
scaffold0148 (142-246)||(2324-2428)
[»] scaffold0077 (1 HSPs)
scaffold0077 (146-246)||(57489-57589)


Alignment Details
Target: scaffold0222 (Bit Score: 139; Significance: 8e-73; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 21048 - 21238
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  |||| ||||||||||||||| |||||| ||||| |||||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  21048 tcattgcagttatagcaaattatgtctccccgcttacaatcaactaatgtgtgtcccttctgtccacacctgaagcacttcttctcacctttagtacaaa 21147  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcct 241  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  21148 cattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcagaagcatctctcctcttgggcctcctctcatcattcagcct 21238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 237
Target Start/End: Complemental strand, 557 - 371
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| |  || || ||||| ||||||||||   ||||||| ||||| |||||||| || || ||||||||||| || |||||||    
T  557 tcattgcagttatagcaaacaacatcaccacgcttgcaatcagctaggctgtgtcctttctgaccacacctgaaacacttcttctcatccttggtacaaa 458  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||| ||| ||||||||||||   ||||| ||||| ||||  ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  457 catcactcttgtggcctttcctgccacatttgtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattca 371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 3e-72; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 51 - 232
Target Start/End: Original strand, 23274429 - 23274610
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  23274429 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagcacttcttctcatctttagtacaaa 23274528  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||| ||||||||||||||||||||||||| ||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  23274529 cattactcttgtggcctttctcaccacacttgttgcaaacaatttcagtaggagcatctctcctcttgggcctcctctcatc 23274610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 19716594 - 19716438
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| ||||||||||   ||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  19716594 cgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacact 19716495  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||| ||||  ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  19716494 tgtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattca 19716438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 19721157 - 19721001
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| ||||||||||   ||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  19721157 cgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacact 19721058  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||| ||||  ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  19721057 tgtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattca 19721001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 100 - 238
Target Start/End: Complemental strand, 23097576 - 23097438
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    ||||||| ||||| |||||| | ||||| ||||||| |||||| ||||||||||||||||||||||||||||| ||||||||  ||||||  ||||||||    
T  23097576 tgtgtcctttctgaccacacttgaagcacttcttctgatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcagc 23097477  T
Q  200 aggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  23097476 aggagcatctctcctcttgggcctcctctcatcattcag 23097438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 28350807 - 28350906
Alignment:
Q  147 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||||||||||| ||||  |||||||    
T  28350807 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgct 28350906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 72 - 219
Target Start/End: Original strand, 20848446 - 20848592
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  20848446 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 20848545  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgg 219  Q
    ||||||||||||||| || ||||||| |||||||||||||||||||||    
T  20848546 caccacacttgtagc-aacaatctcaacaggagcatctctcctcttgg 20848592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 21901469 - 21901559
Alignment:
Q  147 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||||||| |||| ||||||| ||||| || ||||||||||| ||||    
T  21901469 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattca 21901559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 232
Target Start/End: Original strand, 12577219 - 12577370
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| ||||| ||||  ||||| |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| |||||||    
T  12577219 cgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacact 12577318  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |  |||| |  ||||||||||||||||| ||| |  | ||||||||||||||    
T  12577319 taaagcacactatctcagcaggagcatccctcttactcggcctcctctcatc 12577370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 22462993 - 22462931
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 208  Q
    |||||||||||| |||||||||||||||||||| ||| | |||| |||||| |||||||||||    
T  22462993 acaaacattactcttgtggcctttctcaccacagttgaaacaaacaatctccgcaggagcatc 22462931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 208
Target Start/End: Complemental strand, 24657229 - 24657108
Alignment:
Q  87 caatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagc 186  Q
    |||||||||||| |||| |||||||  |||||||  || || |||||| | || | || ||||||| |||| |||||||||||||||||||| ||| | |    
T  24657229 caatcagctaatgtgtgacccttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcaccacaattgaaac 24657130  T
Q  187 aaagaatctcagcaggagcatc 208  Q
    ||  ||||||||||||| ||||    
T  24657129 aagtaatctcagcaggaacatc 24657108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 208
Target Start/End: Complemental strand, 24705059 - 24704932
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||||||  |||| |||||||  ||||||   || ||||||||  | || | || ||||||||| || |||||||||||||||||||| |    
T  24705059 cgcttgcaatcagctaaagtgtgacccttcttgccacactggaaacatttctttacctcctcaggacaaacattgctcttgtggcctttctcaccacaat 24704960  T
Q  181 tgtagcaaagaatctcagcaggagcatc 208  Q
    || | || | ||||||||||||| ||||    
T  24704959 tgaaacagataatctcagcaggaacatc 24704932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 11351223 - 11351161
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 208  Q
    ||||||||| || |||||||||||||||||||| ||| | || | |||||| |||||||||||    
T  11351223 acaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatc 11351161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 24817355 - 24817261
Alignment:
Q  143 agtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||||| ||||||| |||||||| |||||||||||  | ||||||| |||||||| || || |||| || |  | |||||||||||||| ||||    
T  24817355 agtacaagcattactcttgtggcccttctcaccacaagtatagcaaacaatctcagtagtagtatctttctttctaggcctcctctcatcattca 24817261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 23205245 - 23205306
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcat 207  Q
    |||||||||||| |||||||||||||| ||||| ||| | |||| |||||| | ||||||||    
T  23205245 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgaaggagcat 23205306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 23676849 - 23676910
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcat 207  Q
    |||||||||||| |||||||||||||| ||||| ||| | |||| |||||| | ||||||||    
T  23676849 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgaaggagcat 23676910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 51 - 237
Target Start/End: Original strand, 2865 - 3051
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| | |||||||||||||||  |||||    
T  2865 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagaacttcttctcatctttatcacaaa 2964  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||||| ||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  2965 cattactcttgtggcctttcttaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattca 3051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 5e-68; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 51 - 237
Target Start/End: Original strand, 13676646 - 13676832
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| | |||||||||||||||  |||||    
T  13676646 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagtacttcttctcatctttatcacaaa 13676745  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||||| ||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  13676746 cattactcttgtggcctttcttaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattca 13676832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 100 - 238
Target Start/End: Complemental strand, 11385434 - 11385296
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    ||||||| ||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||  ||||||||    
T  11385434 tgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttatagcaaactatctcagc 11385335  T
Q  200 aggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  11385334 aggagcatctctcctcttgggccttctctcatcattcag 11385296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 232
Target Start/End: Complemental strand, 14283398 - 14283247
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||||||| |||| |||||||| |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||    
T  14283398 cgcttgcaatcagctaatgtgtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacact 14283299  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||| |||| || |||||||||||||||||||||   |||||||||||||||    
T  14283298 tgtaacaaacaacctcagcaggagcatctctcctaacgggcctcctctcatc 14283247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 51 - 232
Target Start/End: Complemental strand, 15099657 - 15099476
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| ||||| || ||||| |||||| |||   ||||||||||||| |||||||| ||||| |||||||||||| ||  |||||    
T  15099657 tcattgcagttataacaaacgatgtccccacgcttacaatcatctagagtgtgtcccttctgaccacacctgaagcacttcttctcatctctatcacaaa 15099558  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    | ||||| |||||||||||||||||||||||| ||||||  || |||| |||||||||||||||||||||||||||| ||||    
T  15099557 cgttactcttgtggcctttctcaccacacttgaagcaaactatgtcagtaggagcatctctcctcttgggcctcctcccatc 15099476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 66 - 246
Target Start/End: Original strand, 19150221 - 19150401
Alignment:
Q  66 caaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 165  Q
    ||||| || ||||| ||||| |||||||| ||| ||||||| ||||| |||||||||||||| ||||||| ||||  |  ||| |||||||| |||||||    
T  19150221 caaacaatatctccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctgatctcgatcacacacattactgttgtggc 19150320  T
Q  166 ctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||||||||||||| |||||| ||| |||| |||||||||||||||||| |||||||||||||| |||| ||| ||||    
T  19150321 ctttctcaccacacttgaagcaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgct 19150401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 66 - 246
Target Start/End: Original strand, 20749620 - 20749800
Alignment:
Q  66 caaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 165  Q
    ||||| || ||||| ||||| |||||||| ||| ||||||| ||||| |||||||||||||| ||||||| ||||  |  ||| |||||||| |||||||    
T  20749620 caaacaatatctccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctgatctcgatcacacacattactgttgtggc 20749719  T
Q  166 ctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||||||||||||| |||||| ||| |||| |||||||||||||||||| |||||||||||||| |||| ||| ||||    
T  20749720 ctttctcaccacacttgaagcaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgct 20749800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 232
Target Start/End: Complemental strand, 13965673 - 13965541
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    |||| |||||||| |||||||| ||||||||  | |||||||||  |||||||||||| |||||| |||||||||||||||||||||||  |||||||||    
T  13965673 tgtgacccttctgaccacacctgaagcattttctatcatctttaccacaaacattactcttgtggtctttctcaccacacttgtagcaatcaatctcagc 13965574  T
Q  200 aggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||||||||||||||||||||||| |||||    
T  13965573 aggagcatctctcctcttgggcctcctatcatc 13965541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 26091831 - 26091671
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  26091831 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 26091732  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||    
T  26091731 caccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatc 26091671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 40924850 - 40924690
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  40924850 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 40924751  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||    
T  40924750 caccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatc 40924690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 51 - 237
Target Start/End: Original strand, 12459823 - 12460009
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  || || ||||| || ||||| || |||||||   ||||||||||||| ||||||||||| |||||| |||||||| ||  ||||     
T  12459823 tcattgcagttatagcagacaatgtccccacgcttacattcagctagggtgtgtcccttctgaccacacctaaaacatttcctctcatctctaccacaag 12459922  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||| || ||||||||||| |||||||||||||| || | ||||||||||||| |||||||||||||||||||||| ||||| ||||    
T  12459923 cattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggaacatctctcctcttgggcctcctatcatcattca 12460009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 26115623 - 26115463
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  26115623 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 26115524  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||||||| |||||    
T  26115523 caccacacttgtaacaaacaatctcagccggagcatctctcctcttgggcctcctatcatc 26115463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 12712681 - 12712530
Alignment:
Q  87 caatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagc 186  Q
    ||||||||||| | ||| ||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||  |||    
T  12712681 caatcagctaacacgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttaaagc 12712582  T
Q  187 aaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    |||  |||||| ||||||  ||||| | |||||| || |||||||| |||||    
T  12712581 aaactatctcaacaggagtgtctcttcccttgggtcttctctcatcattcag 12712530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 49155517 - 49155671
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  | || |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  49155517 atgtccccacgcttgcattcagctaaactatgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 49155616  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcct 226  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  49155617 caccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 49155671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 66 - 237
Target Start/End: Complemental strand, 16947511 - 16947340
Alignment:
Q  66 caaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 165  Q
    ||||| |||||||| ||||| || ||||||| | ||||||| ||||| ||||||||||  || ||| |||||||| ||  |||| ||||||| |||||||    
T  16947511 caaacaatgtctccacgcttacattcagctagtgtgtgtcctttctgaccacacctaacacacttcctctcatctctaccacaagcattactcttgtggc 16947412  T
Q  166 ctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||| |||||||||||||| |||| ||| ||| | ||||||||||||||||||||||| |||||||| ||||    
T  16947411 ctttttcaccacacttgtaacaaacaatttcaactggagcatctctcctcttgggccttctctcatcattca 16947340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 238
Target Start/End: Complemental strand, 14261270 - 14261113
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||| ||| ||||||| ||||| | |||||||||| | ||||||||||||  |  ||  |||||||| ||||||||||||||||||||||    
T  14261270 cgcttgcaatcagccaatgtgtgtcctttctgactacacctaaagtacttcttctcatctcgatgacgcacattactcttgtggcctttctcaccacact 14261171  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    || |||||| |||||||| |||||||| ||||| ||| |||||||||||||| |||||    
T  14261170 tgaagcaaataatctcagtaggagcatatctccccttaggcctcctctcatcattcag 14261113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 72 - 246
Target Start/End: Original strand, 13024560 - 13024734
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    |||||||| ||||| || |||||||   ||||||| ||||  |||||||| || |||||| |||||| | ||  | || |||| |||||||||||||| |    
T  13024560 atgtctccacgcttacattcagctagggtgtgtcctttctaaccacacctgaaacatttcctctcatatctaccataagcattgcttttgtggccttttt 13024659  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||||||||| |||| ||| |||||||||||||||||||||||||||||||| ||||| |||| ||| ||||    
T  13024660 caccacacttgtaacaaacaatttcagcaggagcatctctcctcttgggcctcctatcatcattcatcctctgct 13024734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 224
Target Start/End: Original strand, 21755637 - 21755780
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| || ||||||||  |||| |||||||| |||||||| || || ||| |||||||||||  ||||||||| || ||||||||||| ||||||||||    
T  21755637 cgcttacattcagctaaagtgtgacccttctgaccacacctgaaacacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacact 21755736  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctc 224  Q
    |||| |||| ||||||||  ||||||||||||||||| ||||||    
T  21755737 tgtaacaaacaatctcagagggagcatctctcctcttaggcctc 21755780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 145 - 237
Target Start/End: Complemental strand, 12203760 - 12203668
Alignment:
Q  145 tacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||||||||||| |||||||| |||||||||||||||||||||| |||| |||||||| ||||||||||||| || ||||||||||| ||||    
T  12203760 tacaaacattactcttgtggcccttctcaccacacttgtagcaaacaatcacagcaggaacatctctcctcttaggtctcctctcatcattca 12203668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 232
Target Start/End: Original strand, 14144886 - 14145037
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| ||||||||||| | ||| ||||| || |||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| ||| |||    
T  14144886 cgcttgcaatcagctaacacgtgacccttttgaccacacctgaagcacttcttctcctccttggtacaaacgttactcttgtggcctttctcgccatact 14144985  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |  | ||||  ||||||||||||||||||||||| |  ||||||||||||||    
T  14144986 taaaacaaactatctcagcaggagcatctctcctatatggcctcctctcatc 14145037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 12798519 - 12798372
Alignment:
Q  87 caatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagc 186  Q
    |||||||||||  ||||||| ||||| |||||||| ||||| ||||||||||||     |||||||||||| |||||||||||    ||||||||| | |    
T  12798519 caatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctcggtcacaaacattactcttgtggcctttt---ccacacttgaaac 12798423  T
Q  187 aaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||| ||| |||| | ||||||||||||||||| ||||||||||||| ||||    
T  12798422 aaacaatatcagtatgagcatctctcctcttgagcctcctctcatcattca 12798372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 232
Target Start/End: Complemental strand, 18050977 - 18050826
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| ||||| ||||  ||||| |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| |||||||    
T  18050977 cgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacact 18050878  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |  |||| |  ||||||||||||||||| ||| |  | ||||||||||||||    
T  18050877 taaagcacactatctcagcaggagcatccctcttactcggcctcctctcatc 18050826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 244
Target Start/End: Original strand, 15627810 - 15627911
Alignment:
Q  143 agtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctt 242  Q
    ||||||| | ||||| |||||||||||||||||||| |||||||||| ||  |||||||||| |||| || |  | |||||| ||||||| |||| ||||    
T  15627810 agtacaagcgttactcttgtggcctttctcaccacagttgtagcaaacaacttcagcaggagtatctttctttctaggcctcttctcatcattcaccctt 15627909  T
Q  243 tg 244  Q
    ||    
T  15627910 tg 15627911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 11984273 - 11984343
Alignment:
Q  138 tctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 208  Q
    |||| |||||||||||| || |||||||||||||||||||| ||| | |||  ||||||||| ||||||||    
T  11984273 tcttcagtacaaacattgctcttgtggcctttctcaccacaattgaaacaagtaatctcagctggagcatc 11984343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 124; Significance: 7e-64; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 51 - 246
Target Start/End: Complemental strand, 39403 - 39208
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| |  ||||||||||| |||| ||||||| ||||||| ||||| |||||||| ||||| |||||||||||||||  |||||    
T  39403 tcattgcagttatagcaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaa 39304  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  39303 cattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctctgct 39208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 207
Target Start/End: Complemental strand, 180894 - 180753
Alignment:
Q  66 caaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 165  Q
    ||||| || ||||| ||||| |||||||| || |  || |||||||| || || || || |||||||||||||||| ||| ||| ||||||| |||||||    
T  180894 caaacaatatctccacgcttgcaatcagccaacacatgacccttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggc 180795  T
Q  166 ctttctcaccacacttgtagcaaagaatctcagcaggagcat 207  Q
    | ||| ||||||| ||||| |||| || |||| |||||||||    
T  180794 ccttcacaccacatttgtaacaaacaacctcaacaggagcat 180753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 14753 - 14815
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 208  Q
    |||||||||||| |||||||| ||||| ||||||||| | |||| |||||| |||||||||||    
T  14753 acaaacattactcttgtggccattctcgccacacttgaaacaaacaatctccgcaggagcatc 14815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 5244 - 5298
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagca 200  Q
    |||| ||||||| || |||||||||||||||||  ||||||||| ||||||||||    
T  5244 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagca 5298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 123; Significance: 3e-63; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 2022 - 1832
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| | |||||||||||| |||||||||||| ||||||| ||||| |||||||| ||||| |||||||||||||||  |||||    
T  2022 tcattgcagttatagcaaacaacgtctccccgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaa 1923  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcct 241  Q
    ||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| ||||||||    
T  1922 cattactcttgtggcctttctcaccacacttgtagcaaacaatttcagcaggagcatctatcctcttgggcctcctctcatcattcagcct 1832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 66 - 232
Target Start/End: Complemental strand, 11961 - 11795
Alignment:
Q  66 caaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 165  Q
    ||||| ||||| || ||||| ||||||||||   ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  11961 caaacaatgtcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggc 11862  T
Q  166 ctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||| ||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||||||    
T  11861 ctttctcgccacacttgtaacaaacgatctcagtaggagcatctctcctcttgggcctcctctcatc 11795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 237
Target Start/End: Original strand, 70684 - 70792
Alignment:
Q  129 ttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctct 228  Q
    |||||||||||||| || || |||||||  |||||||||||| ||||||||||||| |||| ||  ||| ||||||||||||||| | | |||| |||||    
T  70684 ttcttctcatctttggtgcagacattacccttgtggcctttcgcaccacacttgtaacaaacaacatcaacaggagcatctctccccctaggccgcctct 70783  T
Q  229 catctttca 237  Q
    |||| ||||    
T  70784 catcattca 70792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 12357822 - 12357632
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| | |||||||||||| |||||||||||| ||||||| ||||| |||||||| ||||| |||||||||||||||  ||| |    
T  12357822 tcattgcagttatagcaaacaacgtctccccgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaga 12357723  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcct 241  Q
    ||||||| ||||||||||| || |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  12357722 cattactcttgtggcctttttcgccacacttgtagcaaacaatctcagcaggagtatctctcctcttgggcctcctctcatcattcagcct 12357632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 81 - 241
Target Start/End: Complemental strand, 14290797 - 14290637
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||||||  ||||||| |||||||||||||||||||| ||||||||||||  |  ||| |||||||| ||||||||||||||||||||||    
T  14290797 cgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcatctcaatcacacacattactcttgtggcctttctcaccacact 14290698  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcct 241  Q
    || |||||| |||||||| |||||||||||||||||| |||||||||||||| ||||||||    
T  14290697 tgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcct 14290637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 51 - 231
Target Start/End: Complemental strand, 18131642 - 18131462
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  || ||||  || || ||||| |||| |||||||  |||||| ||||| |||||||| ||||| |||||||||||||||  |||||    
T  18131642 tcattgcagttatagcacactacatccccacgcttacaattagctaatgcgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaa 18131543  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcat 231  Q
    ||||||| |||||||||||||| |||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||    
T  18131542 cattactcttgtggcctttctcgccacacttgtagcaatcaatctcaacaggagcatctctcctcttgggcctcctctcat 18131462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 31941786 - 31941923
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    ||||||||||||| |||||||| || || |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||  ||||||||    
T  31941786 tgtgtcccttctgaccacacctgaaacacttcttctcatctttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagc 31941885  T
Q  200 aggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||||||| |||||| ||||||||||||||||| ||||    
T  31941886 aggagcatttctcctattgggcctcctctcatcattca 31941923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 100 - 237
Target Start/End: Complemental strand, 31692431 - 31692294
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    ||||||||||||  |||||||| || || |||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||  ||||||||    
T  31692431 tgtgtcccttctaaccacacctgaaacacttcttctcatctttggtacaaacattactcttgtggcctttctcaccacacttgtaacaaacgatctcagc 31692332  T
Q  200 aggagcatctctcctcttgggcctcctctcatctttca 237  Q
    || ||||| |||||| ||||||||||||||||| ||||    
T  31692331 agaagcatttctcctattgggcctcctctcatcattca 31692294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 28757174 - 28757334
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  28757174 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 28757273  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||    
T  28757274 caccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatc 28757334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 47126799 - 47126959
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  47126799 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 47126898  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||    
T  47126899 caccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatc 47126959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 232
Target Start/End: Original strand, 17494484 - 17494661
Alignment:
Q  54 ttgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 153  Q
    ||||||||||  ||||| |||||||| | ||| || ||||||| | ||||||| ||||| |||||||| | ||| |||||||||||| ||  ||||||||    
T  17494484 ttgcagttatagcaaacaatgtctccacacttacagtcagctagtgtgtgtcctttctgaccacacctga-gcacttcttctcatctctatcacaaacat 17494582  T
Q  154 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||| ||||||||||| |||||||| ||| |||||| |||||||| | |||||||||||||||||||||||||||||||    
T  17494583 tactcttgtggcctttttcaccacatttgaagcaaacaatctcagtatgagcatctctcctcttgggcctcctctcatc 17494661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 100 - 232
Target Start/End: Original strand, 17189257 - 17189389
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    ||||||| ||||| |||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||||| ||||||||  | |||| ||| ||| |    
T  17189257 tgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacgttacttttgtggcctttctcgccacacttaaaacaaacaatatcaac 17189356  T
Q  200 aggagcatctctcctcttgggcctcctctcatc 232  Q
    |||||||||||||||||||| ||||||||||||    
T  17189357 aggagcatctctcctcttggacctcctctcatc 17189389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 81 - 241
Target Start/End: Original strand, 35983045 - 35983205
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||| ||| ||||||| ||||||||||| || || || ||||||||||||     ||| |||||||| ||||||||||||||||||||||    
T  35983045 cgcttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatctcggtcacacacattactcttgtggcctttctcaccacact 35983144  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcct 241  Q
    || |||||| |||| ||| |||||||||||||||||| |||||||||||||| ||||||||    
T  35983145 tgaagcaaataatcacagtaggagcatctctcctcttaggcctcctctcatcattcagcct 35983205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 24190187 - 24190324
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    ||||||| ||||| |||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||||| ||||||||  | |||| ||| ||| |    
T  24190187 tgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacgttacttttgtggcctttctcgccacacttaaaacaaacaatatcaac 24190286  T
Q  200 aggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||||||||||||||||||  |||||||||||| ||||    
T  24190287 aggagcatctctcctcttgtacctcctctcatcattca 24190324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 10408823 - 10408983
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  10408823 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 10408922  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||| ||||| |||| ||||||||| |||||||||||||||||||||||||| |||||    
T  10408923 caccacatttgtaacaaacaatctcagctggagcatctctcctcttgggcctcctatcatc 10408983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 81 - 232
Target Start/End: Complemental strand, 16384637 - 16384486
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||| || ||||| |||||||| |||||||| ||||| ||||||||||| || |||||||| ||||| |||||| ||||||| |||||||    
T  16384637 cgcttgcaatcagccaacatgtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggactttctcgccacact 16384538  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |  | ||||  ||||||||||||||||||||||| || ||||||||||||||    
T  16384537 taaaacaaactatctcagcaggagcatctctcctattcggcctcctctcatc 16384486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 105 - 232
Target Start/End: Complemental strand, 16831769 - 16831642
Alignment:
Q  105 cccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggag 204  Q
    |||||||| |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||||||  | ||||  |||||||||||||    
T  16831769 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 16831670  T
Q  205 catctctcctcttgggcctcctctcatc 232  Q
    |||||||||| || ||||||||||||||    
T  16831669 catctctcctattcggcctcctctcatc 16831642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 237
Target Start/End: Complemental strand, 16825559 - 16825388
Alignment:
Q  66 caaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 165  Q
    ||||| ||||| || ||||| |||||||||||  ||||||| || |  |||||||| ||||| |||||||||||      |||||||||||| |||||||    
T  16825559 caaacaatgtccccacgcttacaatcagctaaagtgtgtccttttttaccacacctgaagcacttcttctcatcacggtcacaaacattactcttgtggc 16825460  T
Q  166 ctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||| |||||||||||| | |||| ||| |||| ||||||||||||| ||||||||||||||||||||||||    
T  16825459 ctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcatcttgggcctcctctcatctttca 16825388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 12181209 - 12181359
Alignment:
Q  82 gcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacactt 181  Q
    |||| |||||||||| | ||||||| ||| | ||||| || ||||| |||||||||||| ||  ||| || ||||| ||||||||||| |||||||||||    
T  12181209 gcttacaatcagctagtgtgtgtcctttccgaccacaactgaagcacttcttctcatctctatcacagactttactcttgtggcctttttcaccacactt 12181308  T
Q  182 gtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    | |||||| ||| |||| |||||||||||||||||||| ||||||||||||    
T  12181309 gaagcaaaaaatgtcagtaggagcatctctcctcttggtcctcctctcatc 12181359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 51 - 164
Target Start/End: Complemental strand, 11949220 - 11949107
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| |  ||||||||||| |||||||||||||||||||| ||||| ||||| || ||||| ||||||||||||||||||||||    
T  11949220 tcattgcagttatagcaaacaacatctccccgcttacaatcagctaatatgtgtcctttctgaccacatctgaagcacttcttctcatctttagtacaaa 11949121  T
Q  151 cattacttttgtgg 164  Q
    ||||||| ||||||    
T  11949120 cattactcttgtgg 11949107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 72 - 246
Target Start/End: Complemental strand, 16326983 - 16326807
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  ||||||||||||| |||||||| || |||||| |||||||| ||  ||||||||| || ||||||||||| |    
T  16326983 atgtccccacgcttacattcagctaaattgtgtcccttctgaccacacctgaaacatttcctctcatctctaccacaaacattgctcttgtggccttttt 16326884  T
Q  172 caccacacttgtagcaaagaa-tctcagcaggagca-tctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    |||||||||| || |||| || |||||||||||||| |||||||||||||| ||||| ||||| |||| | ||||||    
T  16326883 caccacacttataacaaacaagtctcagcaggagcagtctctcctcttgggtctcctatcatcattcaccttttgct 16326807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 147 - 246
Target Start/End: Complemental strand, 15008783 - 15008684
Alignment:
Q  147 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||||||||||| ||||  |||||||    
T  15008783 caaacattactcttgtggcctctctcaccacacttgtagcaaacaatctcagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgct 15008684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 2037111 - 2037026
Alignment:
Q  147 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  2037111 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatc 2037026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 2040852 - 2040767
Alignment:
Q  147 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  2040852 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatc 2040767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 14039676 - 14039761
Alignment:
Q  147 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  14039676 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatc 14039761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 11958446 - 11958290
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| || ||||||| | | ||||| ||||| |||||||| || || ||| |||||||| ||  |||| |||| |||||||||||||| ||||||||||    
T  11958446 cgcttacattcagctagtgtatgtcctttctgaccacacctgaaacacttcctctcatctctaccacaagcattgcttttgtggcctttttcaccacact 11958347  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    | || |||| ||| |||||||||||||||||||||||  ||||||| ||||| ||||    
T  11958346 tataacaaacaatttcagcaggagcatctctcctcttaagcctcctatcatcattca 11958290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 13317786 - 13317683
Alignment:
Q  129 ttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctct 228  Q
    |||||||||||||| || |||||||||||||||||||||||  ||||||||||||| |||| ||  ||| ||||||||||||||| | | ||||||||||    
T  13317786 ttcttctcatctttggtgcaaacattacttttgtggccttttgcaccacacttgtaacaaacaacatcaacaggagcatctctccccctaggcctcctct 13317687  T
Q  229 catc 232  Q
    ||||    
T  13317686 catc 13317683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 145 - 232
Target Start/End: Original strand, 15230531 - 15230618
Alignment:
Q  145 tacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||||||||| |||||||| || ||||||||||||||||||| ||||||||||||| ||||| | ||||| ||||||||||||||    
T  15230531 tacaaacattactcttgtggcccttttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatc 15230618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 145 - 232
Target Start/End: Original strand, 15236399 - 15236486
Alignment:
Q  145 tacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||||||||| |||||||| || ||||||||||||||||||| ||||||||||||| ||||| | ||||| ||||||||||||||    
T  15236399 tacaaacattactcttgtggcccttttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatc 15236486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 232
Target Start/End: Complemental strand, 8744655 - 8744504
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| ||||| ||||  ||||| |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| |||||||    
T  8744655 cgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacact 8744556  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |  |||| |  ||||||||||||||||| ||| |  | ||||||||||||||    
T  8744555 taaagcacactatctcagcaggagcatccctcttactcggcctcctctcatc 8744504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 232
Target Start/End: Original strand, 13944888 - 13945039
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| ||||| ||||  ||||| |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| |||||||    
T  13944888 cgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacact 13944987  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |  |||| |  ||||||||||||||||| ||| |  | ||||||||||||||    
T  13944988 taaagcacactatctcagcaggagcatccctcttactcggcctcctctcatc 13945039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 238
Target Start/End: Complemental strand, 12857761 - 12857604
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagt-acaaacattacttttgtggcctttctcaccacac 179  Q
    ||||| || ||||||| ||||||||| |||| |||||| |  || || |||||||||||   ||| ||| ||||||||  ||||||| || |||||||||    
T  12857761 cgcttgcactcagctattatgtgtcctttctttccacatcggaaacacttcttctcatcac-agtcacatacattactcatgtggcccttttcaccacac 12857663  T
Q  180 ttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    ||| | || | |||||||| ||||||||||||||| || |||||||||||||| |||||    
T  12857662 ttgaaacagacaatctcagtaggagcatctctccttttaggcctcctctcatcattcag 12857604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 232
Target Start/End: Complemental strand, 12843314 - 12843228
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||| ||||||| ||||||||||||||||||||  | ||||| | ||||||| ||||||||||| || || | |||| |||||||||    
T  12843314 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttcttcctaggccgcctctcatc 12843228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 10417265 - 10417202
Alignment:
Q  126 catttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaa 189  Q
    |||||||||||||||| ||| ||| ||||||| |||||||| ||| ||||||| ||||| ||||    
T  10417265 catttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatttgtaacaaa 10417202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 208
Target Start/End: Original strand, 12501788 - 12501914
Alignment:
Q  82 gcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacactt 181  Q
    |||| |||||||||||| |||| |||||||  |||||||  || ||||||||  | || | || ||||||||| || |||||||||||||| ||||| ||    
T  12501788 gcttgcaatcagctaatgtgtgacccttcttgccacaccggaaacatttctttacctcctcaggacaaacattgctcttgtggcctttctcgccacaatt 12501887  T
Q  182 gtagcaaagaatctcagcaggagcatc 208  Q
    | | ||   ||||||||||||| ||||    
T  12501888 gaaacaggtaatctcagcaggaacatc 12501914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 16804158 - 16804096
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 208  Q
    ||||||||| || |||||||||||||||||||| ||| | |||  ||||||||| ||||||||    
T  16804158 acaaacattgctcttgtggcctttctcaccacaattgaaacaagtaatctcagctggagcatc 16804096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 23079228 - 23079166
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 208  Q
    ||||||||| || |||||||||||||||||||| ||  | |||| |||| |||||||||||||    
T  23079228 acaaacattgctcttgtggcctttctcaccacaattaaaacaaacaatcacagcaggagcatc 23079166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 208
Target Start/End: Complemental strand, 23415009 - 23414939
Alignment:
Q  138 tctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 208  Q
    ||||||| |||||||||||| |||||||||||||| ||| | ||| | || | |||||| |||||||||||    
T  23415009 tctttaggacaaacattactcttgtggcctttctcgccatagttgaaacagacaatctccgcaggagcatc 23414939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 19727686 - 19727770
Alignment:
Q  153 ttacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||| || |||||||||||||||||  | ||||||| ||||||||||  | ||||| || | || |||||||||||||| ||||    
T  19727686 ttactcttatggcctttctcaccacaagtatagcaaacaatctcagcaacaacatctttctttttaggcctcctctcatcattca 19727770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 2e-54; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 51 - 246
Target Start/End: Complemental strand, 20833039 - 20832844
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| |  ||||||| ||| |||||||||| | ||||||| ||||| |||||||| || || ||||||||||||||||||||||    
T  20833039 tcattgcagttataacaaacaacatctcccctcttgcaatcagctagtgtgtgtcctttctgaccacacctgaaacaattcttctcatctttagtacaaa 20832940  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||| |||||||||||||| |||||||||||||||| ||| ||| |||||||||||||||||||||| ||||||||||| |||||||| ||||    
T  20832939 cattactcttgtggcctttctcgccacacttgtagcaaacaatatcaacaggagcatctctcctcttgggtctcctctcatcattcagcctctgct 20832844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 51 - 246
Target Start/End: Original strand, 19857525 - 19857720
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||| ||||||  ||||| |||||||||||||| |||||||||| | ||||||| ||||| |||||||| |||||||||||||||||| ||  ||| |    
T  19857525 tcattgtagttataacaaacaatgtctccccgcttacaatcagctagtgtgtgtcctttctgaccacacctgaagcatttcttctcatctctatcacaga 19857624  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||| ||||||||||| |||||||||||| |||||| |||||| | || ||||||||||||||| |||||||||||||| |||| ||| ||||    
T  19857625 cattactcttgtggcctttttcaccacacttgaagcaaacaatctcggtagaagcatctctcctcttaggcctcctctcatcattcaacctctgct 19857720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 81 - 238
Target Start/End: Complemental strand, 21742661 - 21742504
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||| ||| ||||||| ||||| |||||||||||||| ||||||||||||     ||| |||||||| ||||||||||||||||||||||    
T  21742661 cgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatctcggtcacatacattactcttgtggcctttctcaccacact 21742562  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    || |||||| |||||||| |||||||||||||||||| |||||||||||||| |||||    
T  21742561 tgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcag 21742504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 21739145 - 21738989
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||| ||||  ||||||| ||||| |||||||||||||| ||||||||||||  |  |||||||||||| ||||||||||||||||||||||    
T  21739145 cgcttacaatcaactaaggtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacaaacattactcttgtggcctttctcaccacact 21739046  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    || |||||| |||||||| ||||||| |||||||||| |||||||||||||| ||||    
T  21739045 tgaagcaaataatctcagtaggagcacctctcctcttaggcctcctctcatcattca 21738989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 232
Target Start/End: Original strand, 20297683 - 20297815
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    |||| |||||||  |||||||| ||||| ||| |||||||||||  |||||||||||| ||||||| |||||||||||||||||| |||| |||||||||    
T  20297683 tgtgacccttctaaccacacctgaagcacttcctctcatctttaccacaaacattactcttgtggcatttctcaccacacttgtaacaaacaatctcagc 20297782  T
Q  200 aggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||||||||||||||||||||||| |||||    
T  20297783 aggagcatctctcctcttgggcctcctgtcatc 20297815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 81 - 237
Target Start/End: Original strand, 21961308 - 21961464
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| || ||||||||  ||||||||||||| |||||||| ||||| ||| |||||||||||  ||||||||| || ||||||||||| ||||||||||    
T  21961308 cgcttacattcagctaaactgtgtcccttctgaccacacctgaagcacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacact 21961407  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||| |||| |||||||| ||||||||||||||||||||| ||||| ||||| ||||    
T  21961408 tgtaacaaacaatctcagaaggagcatctctcctcttgggtctcctatcatcattca 21961464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 38909944 - 38909784
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  38909944 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 38909845  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||    
T  38909844 caccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatc 38909784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 48426145 - 48426305
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  48426145 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 48426244  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||    
T  48426245 caccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatc 48426305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 66 - 237
Target Start/End: Complemental strand, 24096739 - 24096568
Alignment:
Q  66 caaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 165  Q
    ||||| ||||| || ||||| || ||||||| | ||||||| ||||| ||||||||||| || ||| |||||||| ||  |||| ||||||| |||||||    
T  24096739 caaacaatgtccccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacacttcctctcatctctaccacaagcattactcttgtggc 24096640  T
Q  166 ctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||| |||||||||||| | |||| ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  24096639 ctttttcaccacacttgaaacaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattca 24096568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 37680321 - 37680481
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  37680321 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 37680420  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||||||||||||||||| ||||||| |||||| ||||||||||||||||||||| |||||    
T  37680421 caccacacttgtagcaaacaatctcaacaggagtatctctcctcttgggcctcctatcatc 37680481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 72 - 237
Target Start/End: Original strand, 52989013 - 52989178
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| || || ||| |||||||||||  ||||||||| || ||||||||||| |    
T  52989013 atgtccccacgcttacattcagctaaattgtgacccttctgaccacacctgaaacacttcctctcatctttaccacaaacattgctcttgtggccttttt 52989112  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||||||||||| |||| |||||||| |||||||||||||||||| |||||||| ||||| ||||    
T  52989113 caccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattca 52989178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 246
Target Start/End: Complemental strand, 31537115 - 31536941
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||||||  | |||||| ||  ||||||||| || |||||||||||||    
T  31537115 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcattttctatcatctctaccacaaacattgctcttgtggcctttct 31537016  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    |||||||||| || |||| |||||||| ||||||||||||||||||||| ||||| ||||| |||| ||| ||||    
T  31537015 caccacacttataacaaacaatctcagaaggagcatctctcctcttgggtctcctatcatcattcatcctctgct 31536941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 232
Target Start/End: Complemental strand, 20074799 - 20074667
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    |||| |||||||| |||||||| ||||| ||| ||||||||||| |||||||||| || |||||||||||||||||||||||||| || | ||||||||     
T  20074799 tgtgacccttctgaccacacctgaagcacttcctctcatctttactacaaacattgctcttgtggcctttctcaccacacttgtaacacacaatctcagt 20074700  T
Q  200 aggagcatctctcctcttgggcctcctctcatc 232  Q
     |||||||||||||||||  ||||||| |||||    
T  20074699 gggagcatctctcctcttaagcctcctgtcatc 20074667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 232
Target Start/End: Complemental strand, 22015854 - 22015703
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||||||  ||||||| ||||| |||||||| ||||| |||||||||||| ||  ||||||||||||||| |||||||| || |||||||    
T  22015854 cgcttgcaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaaacattacttttttggcctttttctccacact 22015755  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    || | |||| ||| |  | ||||||||||||| |||| ||||||||||||||    
T  22015754 tgaatcaaacaatatttgtaggagcatctctcttctttggcctcctctcatc 22015703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 18273114 - 18273213
Alignment:
Q  147 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||||||| |||||||| ||||||||||||||||| |||| |||||||| |||| ||||||| ||||| || ||||||||||| ||||  |||||||    
T  18273114 caaacattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgct 18273213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 237
Target Start/End: Complemental strand, 20853884 - 20853713
Alignment:
Q  66 caaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 165  Q
    ||||| || ||||| ||||| || ||||| || || || |||||||| || || || || ||||||||||||||||  || ||| ||||||| |||||||    
T  20853884 caaacgatatctccacgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggc 20853785  T
Q  166 ctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    | ||| ||||||| ||||| |||| ||  ||| ||||||||| ||||| ||| |||  ||||||||| ||||    
T  20853784 ccttcacaccacatttgtaacaaacaacatcaacaggagcatttctccccttaggctgcctctcatcattca 20853713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 16379406 - 16379463
Alignment:
Q  143 agtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagca 200  Q
    ||||||||||||||||||||||||||||||||||||    ||||||| ||||||||||    
T  16379406 agtacaaacattacttttgtggcctttctcaccacaagcatagcaaacaatctcagca 16379463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 21228600 - 21228538
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 208  Q
    |||||||||||| |||||||||||||| ||||| ||| | |||| |||||| |||||||||||    
T  21228600 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatc 21228538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 24515626 - 24515436
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| |  ||||||| |||||||||||||| | ||||||  ||||| |||||||| || || ||||||||||||||||||||||    
T  24515626 tcattgcagttataacaaacaacatctcccctcttccaatcagctagtgtgtgtcttttctgaccacacctgaaacacttcttctcatctttagtacaaa 24515527  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcct 241  Q
    ||||||| ||||||||||||||||||||||| || |||| ||| ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  24515526 cattactcttgtggcctttctcaccacacttataacaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattcagcct 24515436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 51 - 237
Target Start/End: Complemental strand, 14377128 - 14376942
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| |  || || ||||| |||| ||||||  ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||    
T  14377128 tcattgcagttataacaaacaacatcaccacgcttacaattagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaa 14377029  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||||| ||||||||||||||||| ||||||||||||| ||  ||| |||||||||||||||| ||||| ||||||||||| ||||    
T  14377028 cattactcttgtggcctttctcaccgcacttgtagcaaacaacatcaacaggagcatctctcctattgggtctcctctcatcattca 14376942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 48 - 246
Target Start/End: Original strand, 18797756 - 18797954
Alignment:
Q  48 tcatcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtac 147  Q
    ||||||||||||||||  ||||| | ||| || ||||| ||||||||||   ||||||||||||| |||||||| || ||||||| |||||||||||| |    
T  18797756 tcatcattgcagttatagcaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacatttctgctcatctttagtgc 18797855  T
Q  148 aaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    |||||||||| |||||||||||||| |||||||| || |||| ||| ||  |||||||||| ||||||||||||||||||||||| ||||  |||||||    
T  18797856 aaacattactcttgtggcctttctcgccacacttataacaaacaatatccacaggagcatccctcctcttgggcctcctctcatcattcaatctttgct 18797954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 54 - 244
Target Start/End: Original strand, 19456095 - 19456285
Alignment:
Q  54 ttgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 153  Q
    ||||||||||  ||||| |||||||| ||||| |||||| ||| | ||||||| ||||| |  ||||| ||||| |||||||||||| ||  ||| ||||    
T  19456095 ttgcagttatagcaaacaatgtctccacgcttacaatcatctagtgtgtgtcctttctgacaccacctgaagcacttcttctcatctctatcacagacat 19456194  T
Q  154 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttg 244  Q
    |||| ||||||||||| |||||||||||| |||||| |||||||| ||||| ||||||||||||||||||||||||||| |||||||||||    
T  19456195 tactcttgtggcctttttcaccacacttgaagcaaacaatctcagtaggagtatctctcctcttgggcctcctctcatcattcagcctttg 19456285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 54 - 244
Target Start/End: Original strand, 19466240 - 19466430
Alignment:
Q  54 ttgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 153  Q
    ||||||||||  ||||| |||||||| ||||| |||||| ||| | ||||||| ||||| |  ||||| ||||| |||||||||||| ||  ||| ||||    
T  19466240 ttgcagttatagcaaacaatgtctccacgcttacaatcatctagtgtgtgtcctttctgacaccacctgaagcacttcttctcatctctatcacagacat 19466339  T
Q  154 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttg 244  Q
    |||| ||||||||||| |||||||||||| |||||| |||||||| ||||| ||||||||||||||||||||||||||| |||||||||||    
T  19466340 tactcttgtggcctttttcaccacacttgaagcaaacaatctcagtaggagtatctctcctcttgggcctcctctcatcattcagcctttg 19466430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 100 - 238
Target Start/End: Complemental strand, 21567154 - 21567016
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    ||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||  || |||||    
T  21567154 tgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagc 21567055  T
Q  200 aggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  21567054 aggagcatctctcctcttgggccttctctcatcattcag 21567016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 232
Target Start/End: Original strand, 19438101 - 19438252
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| ||||||||||   ||||||| ||||| |||||||| || || || ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  19438101 cgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttattctcatctttagtacaaacattactcaagtggcctttctcaccacact 19438200  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||| | ||  |||||||||||||||||||||||||||||||||||||||||    
T  19438201 tgtaacgaacgatctcagcaggagcatctctcctcttgggcctcctctcatc 19438252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 24367490 - 24367650
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| |||||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  24367490 atgtccccccgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 24367589  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||||||||||| |||||    
T  24367590 caccacacttgtagcaaacaatctcaacatgagcatctctcctcttgggcctcctatcatc 24367650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 51 - 237
Target Start/End: Complemental strand, 10466060 - 10465874
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  || || ||||| || ||||| || |||||||   ||||||||||||| ||||||||||| |||||| |||||||| ||  ||||     
T  10466060 tcattgcagttatagcagacaatgtccccacgcttacattcagctagggtgtgtcccttctgaccacacctaaaacatttcctctcatctctaccacaag 10465961  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||| || ||||||||||| |||||||||||||| || | ||||||||||||| |||||||||||||||||||||| ||||| ||||    
T  10465960 cattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggaacatctctcctcttgggcctcctatcatcattca 10465874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 8720821 - 8720731
Alignment:
Q  147 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||| |||||||||||||| ||||    
T  8720821 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcatcaggatcatctctcctcttaggcctcctctcatcattca 8720731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 16813805 - 16813895
Alignment:
Q  147 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||||||||||| ||||    
T  16813805 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcattca 16813895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 34642762 - 34642645
Alignment:
Q  87 caatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagc 186  Q
    ||||||||||| | ||| ||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||  |||    
T  34642762 caatcagctaacacgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcccttctcgccacacttaaagc 34642663  T
Q  187 aaagaatctcagcaggag 204  Q
    |||  ||||| |||||||    
T  34642662 aaactatctccgcaggag 34642645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 246
Target Start/End: Complemental strand, 19486410 - 19486311
Alignment:
Q  147 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||||||| |||| ||||||| ||||| || ||||||||||| ||||  |||||||    
T  19486410 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgct 19486311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 21474768 - 21474857
Alignment:
Q  150 acattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagc 239  Q
    |||||||| ||||||||||| |||||||||||| | |||| |||||||| |||||||||||||||| | |||||||||||||| ||||||    
T  21474768 acattactcttgtggcctttttcaccacacttgaaacaaacaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagc 21474857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 25771021 - 25771103
Alignment:
Q  159 ttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcct 241  Q
    ||||||||||| |||||||||||| | || | |||||||| |||||||||||||||||| |||||||||||||| ||||||||    
T  25771021 ttgtggcctttttcaccacacttgaaacagacaatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcct 25771103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 146 - 246
Target Start/End: Complemental strand, 30678141 - 30678041
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgc 245  Q
    |||||||||||| |||||||  |||||||||||||||||||||| || ||||||||||| |||| || |  | |||||||||||||| |||| |||||||    
T  30678141 acaaacattactcttgtggctcttctcaccacacttgtagcaaacaacctcagcaggagtatctttctttctaggcctcctctcatcattcaccctttgc 30678042  T
Q  246 t 246  Q
    |    
T  30678041 t 30678041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 25958856 - 25958770
Alignment:
Q  160 tgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    |||||||||||| ||||||| ||||||||| |||||||| |||||||||||| ||||| || ||||||||||| | ||| |||||||    
T  25958856 tgtggcctttcttaccacacctgtagcaaacaatctcagtaggagcatctctactcttaggtctcctctcatcatccagtctttgct 25958770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 15462480 - 15462538
Alignment:
Q  126 catttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgta 184  Q
    ||||||||||||||| | || || |||||||| |||||||||||| |||||||||||||    
T  15462480 catttcttctcatctctggtgcagacattactcttgtggcctttcgcaccacacttgta 15462538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 23081587 - 23081673
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||| ||||||| ||||||||||||||||||||  | || |||| ||||||| ||||||||||| || || | |||| |||||||||    
T  23081587 acaagcattactcttgtggcctttctcaccacaagtataacaaacaatctcaacaggagcatctttcttcctaggccgcctctcatc 23081673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 203
Target Start/End: Complemental strand, 27559142 - 27559029
Alignment:
Q  90 tcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaa 189  Q
    ||||||||| |||| |||||||  |||||||  || || |||||| | || | || ||||||| |||| |||||||||||||||||||| ||| | |||     
T  27559142 tcagctaatgtgtgacccttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcaccacaattgaaacaag 27559043  T
Q  190 gaatctcagcagga 203  Q
     |||||||||||||    
T  27559042 taatctcagcagga 27559029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 237
Target Start/End: Complemental strand, 20010699 - 20010527
Alignment:
Q  66 caaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 165  Q
    ||||| || ||||| ||||| || ||||| || || || |||||||| || || || || ||||||||||||||||  || ||| ||||||| |||||||    
T  20010699 caaacgatatctccacgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggc 20010600  T
Q  166 ctttctcaccacacttgtagcaa-agaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    | ||| ||||||| ||||| ||| | ||  ||| ||||||||| ||||| ||| |||  ||||||||| ||||    
T  20010599 ccttcacaccacatttgtaacaatacaacatcaacaggagcatttctccccttaggctgcctctcatcattca 20010527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 21764976 - 21765038
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 208  Q
    ||||||||| || |||||||||||||||||||| ||| | || | |||||| |||||||||||    
T  21764976 acaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatc 21765038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 51 - 246
Target Start/End: Complemental strand, 9091 - 8896
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| |  ||||||||||| |||| ||||||| ||||||| ||||| |||||||| ||||| ||||||||||| |||  ||| |    
T  9091 tcattgcagttatagcaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatccttatcacaga 8992  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||| ||||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| |||||||| ||||    
T  8991 cattactcttgtggcttttctcaccacacttgtagcaaacaatcttagcagaagcatctctcctcttgggcctcctctcatcattcagcctctgct 8896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 104; Significance: 6e-52; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 75 - 246
Target Start/End: Original strand, 319501 - 319672
Alignment:
Q  75 tctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcac 174  Q
    ||||||||||| |||| ||||||| ||||||| ||||| |||||||| ||||| |||||||||||||||  ||| |||||||| |||||||||||||| |    
T  319501 tctccccgcttacaattagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacagacattactcttgtggcctttctcgc 319600  T
Q  175 cacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||| |||||||| ||||    
T  319601 cacacttgtagcaaacaatcccagcaggagcatctctcctattgggcctcctctcatcattcagcctctgct 319672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 51 - 246
Target Start/End: Original strand, 325941 - 326135
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| |  ||||||||||| |||| ||||||| ||||||| ||||| |||||| | ||||| |||||||||||||||  ||| |    
T  325941 tcattgcagttataacaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacttgaagcacttcttctcatctttatcacaga 326040  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||| |||||| ||||||| |||||||||||||||| |||||||||||||||||||||||| || |||||||||||||| |||||||| ||||    
T  326041 cattactcttgtggtctttctcgccacacttgtagcaaacaatctcagcaggagcatctctcctatt-ggcctcctctcatcattcagcctctgct 326135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 200451 - 200361
Alignment:
Q  147 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||||||  |||| | ||||| ||||| || ||||||||||| ||||    
T  200451 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcattaggaacttctcttctcttaggtctcctctcatcattca 200361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 6e-52; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 51 - 246
Target Start/End: Complemental strand, 22027790 - 22027595
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||| ||||||  ||||| | |||||||| ||| |||||||||||| |||| |||||||| |||||||| ||||| |||||||||||||| |||||||    
T  22027790 tcattgtagttatagcaaacaacgtctcccctcttacaatcagctaatgtgtgacccttctgaccacacctgaagcacttcttctcatctttggtacaaa 22027691  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||| ||||||||||| || ||||||||||| ||||  ||||||||||||||||||||||| ||||||||||||||||| ||||  |||||||    
T  22027690 cattactcttgtggcctttatcgccacacttgtaacaaactatctcagcaggagcatctctcctattgggcctcctctcatcattcaatctttgct 22027595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 105 - 232
Target Start/End: Complemental strand, 16268680 - 16268553
Alignment:
Q  105 cccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggag 204  Q
    |||||||| |||||||| ||||| ||| |||||||||||  |||||||||||| |||||||||||||||||||||||||| |||| |||||||| |||||    
T  16268680 cccttctgaccacacctgaagcacttcctctcatctttaccacaaacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggag 16268581  T
Q  205 catctctcctcttgggcctcctctcatc 232  Q
    |||||||| |||| |||||||| |||||    
T  16268580 catctctcttcttaggcctcctgtcatc 16268553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 28984203 - 28984363
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  28984203 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 28984302  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||||||||| |||| ||||||| | |||||||||||||||||||||||||| |||||    
T  28984303 caccacacttgtaacaaacaatctcaactggagcatctctcctcttgggcctcctatcatc 28984363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 232
Target Start/End: Original strand, 22054164 - 22054315
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| ||||| ||||| | ||| |||||||| ||||| || ||||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||    
T  22054164 cgcttgcaatccgctaaaaggtgacccttctgaccacatctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacact 22054263  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |  | ||||  |||||||||| |||||||||||| || ||||||||||||||    
T  22054264 taaaacaaactatctcagcagaagcatctctcctattcggcctcctctcatc 22054315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 237
Target Start/End: Complemental strand, 31414027 - 31413856
Alignment:
Q  66 caaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 165  Q
    ||||| ||||| || ||||| || ||||||| | ||||||| ||||| ||||||||||| || ||| |||||||| ||  |||| |||| || || ||||    
T  31414027 caaacaatgtccccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacacttcctctcatctctaccacaagcattgctcttatggc 31413928  T
Q  166 ctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||| |||||||||||| | |||| ||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  31413927 ctttttcaccacacttgaaacaaacaatttcaacaggagcatctctcctcttgggcctcctctcatcattca 31413856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 246
Target Start/End: Complemental strand, 6606883 - 6606784
Alignment:
Q  147 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||||||| |||| ||||||| ||||| || ||||||||||| ||||  |||||||    
T  6606883 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgct 6606784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 20391454 - 20391543
Alignment:
Q  148 aaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||||||||| |||||||| |||||||||||||||||||||| |||||||| |||| ||||||| ||||| || ||||||||||| ||||    
T  20391454 aaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagaaggaacatctctactcttaggtctcctctcatcattca 20391543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 232
Target Start/End: Original strand, 19985487 - 19985632
Alignment:
Q  87 caatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagc 186  Q
    |||||||||||| ||||||  ||||||||||| || ||  | |||||||||||      ||| |||||||| ||||||| ||| || ||||||||| | |    
T  19985487 caatcagctaatgtgtgtcatttctgtccacatctgaaatacttcttctcatcacggtcacatacattactcttgtggcttttttcgccacacttgaaac 19985586  T
Q  187 aaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||| |||||||| |||||||||||||||||| ||||||||||||||    
T  19985587 aaacaatctcagtaggagcatctctcctcttaggcctcctctcatc 19985632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 241
Target Start/End: Original strand, 21928748 - 21928889
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    ||||||| ||||||||||| || || || ||||||||||||     ||  |||||||| | |||||| || || ||||||||| | |||||||||||||     
T  21928748 tgtgtcctttctgtccacatctgaaacacttcttctcatctcggtcacttacattactctcgtggcccttttcgccacacttgaaacaaagaatctcagt 21928847  T
Q  200 aggagcatctctcctcttgggcctcctctcatctttcagcct 241  Q
    |||||||||||||||| | |||||||||||||| ||||||||    
T  21928848 aggagcatctctcctcctaggcctcctctcatcattcagcct 21928889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 22374170 - 22374318
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||||||| ||||||| |||| |||||||||||| || ||||| |||||      ||| |||||||| |||||| |||| ||||||||||    
T  22374170 cgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttttcatcacggtcacatacattactcttgtggtctttttcaccacact 22374269  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctc 229  Q
    || | || | |||||||| ||||| |||||||||| | |||||||||||    
T  22374270 tgaaacagacaatctcagtaggagaatctctcctcctaggcctcctctc 22374318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 237
Target Start/End: Complemental strand, 29300936 - 29300750
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||   | || ||||| || ||||| || ||||||| | |||||||  |||| ||||||||||| || ||| | |||||| ||  ||||     
T  29300936 tcattgcagttatagtagacaatgtccccacgcttacattcagctagtgtgtgtcctctctgaccacacctaaaacacttcctttcatctctaccacaag 29300837  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||| || ||||||||| | |||||||||||  | |||| ||| ||||| ||| |||||| ||||||||||||||| ||||| ||||    
T  29300836 cattgctcttgtggcctctttcaccacacttaaaacaaacaatttcagcgggaacatctcccctcttgggcctcctatcatcattca 29300750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 21671881 - 21671944
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatct 209  Q
    |||| ||||||| ||||||||||||||||||||  | ||||| | ||||||| |||||||||||    
T  21671881 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatct 21671944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 22043193 - 22043255
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 208  Q
    |||||||||||| |||||||||||||||||||| ||| | |||  ||||||||  ||||||||    
T  22043193 acaaacattactcttgtggcctttctcaccacaattgaaacaagtaatctcagttggagcatc 22043255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 30310559 - 30310497
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 208  Q
    |||||||||||| |||||||||||||| ||||| ||| | |||| ||| || |||||||||||    
T  30310559 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatatccgcaggagcatc 30310497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 22421308 - 22421276
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccaca 178  Q
    |||| ||||||||||||||||||||||||||||    
T  22421308 acaagcattacttttgtggcctttctcaccaca 22421276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 81 - 246
Target Start/End: Original strand, 7302 - 7467
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| ||||||||||   ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  7302 cgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacact 7401  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    |||| |||| |||||||||||||||||||||||| ||||||||||||||||| |||| ||| ||||    
T  7402 tgtaacaaacaatctcagcaggagcatctctcctattgggcctcctctcatcattcaacctctgct 7467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 4e-50; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 81 - 237
Target Start/End: Original strand, 16150871 - 16151027
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||||| | ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  16150871 cgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacact 16150970  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    | ||||||| ||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  16150971 tatagcaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattca 16151027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 81 - 237
Target Start/End: Original strand, 16155017 - 16155173
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||||| | ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  16155017 cgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacact 16155116  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    | ||||||| ||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  16155117 tatagcaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattca 16155173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 7357493 - 7357653
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    |||||||| ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| |||||||||||  | ||||||| || |||||||||||||    
T  7357493 atgtctccacgcttgcattcagctaaattgtgacccttctgaccacacctgaagcacttcctctcatctttaccataaacattgctcttgtggcctttct 7357592  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||||| |||||| |||| |||||||||||||||||||||||||||||||||||| |||||    
T  7357593 caccactcttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcctatcatc 7357653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 51 - 232
Target Start/End: Original strand, 18259646 - 18259827
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| ||||| || ||||| ||||||||||   ||||||| ||||| |||||||| ||||| |||||||||||| ||  |||||    
T  18259646 tcattgcagttatagcaaacaatgtccccacgcttacaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaaa 18259745  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||| ||||||||||| |||||||||||  |||||| ||| | || |||||||||| ||||||||||||||||||||||    
T  18259746 cattactcttgtggcctttttcaccacacttaaagcaaacaatattagtaggagcatctgtcctcttgggcctcctctcatc 18259827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 3261840 - 3261680
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  3261840 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 3261741  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||    
T  3261740 caccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatc 3261680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 81 - 231
Target Start/End: Complemental strand, 44658903 - 44658753
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| ||||||||||||||||||||||    
T  44658903 cgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacact 44658804  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcat 231  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||| ||||    
T  44658803 tgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcat 44658753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 81 - 237
Target Start/End: Original strand, 20893266 - 20893422
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| || ||||||||  ||||||||||||| |||||||| ||||| ||| |||||||| ||  ||||||||| || |||| |||||| ||||||||||    
T  20893266 cgcttgcattcagctaaattgtgtcccttctgaccacacctgaagcacttcctctcatctctaccacaaacattgctcttgttgcctttttcaccacact 20893365  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||| |||| |||||||| |||||||||||||||||| |||||||| ||||| ||||    
T  20893366 tgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattca 20893422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 232
Target Start/End: Original strand, 15266984 - 15267162
Alignment:
Q  54 ttgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 153  Q
    ||||||||||  ||||| ||||||||  |||| ||||||||||   ||||||| ||||| |||||||| ||||| |||||||||||| |   ||||||||    
T  15266984 ttgcagttatagcaaacaatgtctccatgcttacaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctctgtcacaaacat 15267083  T
Q  154 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||| || ||||| |||||| |||||||| |||||| ||| |  | |||||||||||||||||||||||||||||||||    
T  15267084 tactcttatggcccttctcatcacacttgaagcaaacaatattcgtaggagcatctctcctcttgggcctcctctcatc 15267162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 29450583 - 29450423
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| || || ||| | ||||||     |||||||||||| |||||||||||||    
T  29450583 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaaacacttcctatcatctcctccacaaacattactcttgtggcctttct 29450484  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||| |||||||| |||||    
T  29450483 caccacacttgtagcaaacaatctcaacaggagcatctctcctcttaggcctcctatcatc 29450423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 100 - 237
Target Start/End: Complemental strand, 11204250 - 11204113
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    |||| |||||||| |||||||| ||||||||  | |||||| ||  ||||||||| || ||||||||||||||||||||||| || |||| ||||||||     
T  11204250 tgtgacccttctgaccacacctgaagcattttctatcatctctaccacaaacattgctcttgtggcctttctcaccacacttataacaaacaatctcaga 11204151  T
Q  200 aggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||||||||||||||||||| ||||| ||||| ||||    
T  11204150 aggagcatctctcctcttgggtctcctatcatcattca 11204113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 82 - 238
Target Start/End: Original strand, 15073595 - 15073751
Alignment:
Q  82 gcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacactt 181  Q
    |||| |||||||||||| ||||||| |||| |||||||||||| || |||||||||||      ||| |||||||| ||||||||||| |||||||||||    
T  15073595 gcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggcctttttcaccacactt 15073694  T
Q  182 gtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    | | || | |||||||| |||||||||||||||| | |||||||||||||| |||||    
T  15073695 gaaacagacaatctcagtaggagcatctctcctcctaggcctcctctcatcattcag 15073751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 82 - 237
Target Start/End: Complemental strand, 14993403 - 14993248
Alignment:
Q  82 gcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacactt 181  Q
    |||| |||||||||||  ||||||| ||||| |||||||| ||||| |||||||  ||      |||||||||||| ||||||||||| |||||||||||    
T  14993403 gcttgcaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttcttctcacggtcacaaacattactcttgtggcctttttcaccacactt 14993304  T
Q  182 gtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    | | |||| ||| |||| ||||||||||||||||||||||||||||||||| ||||    
T  14993303 gaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattca 14993248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 8708978 - 8709077
Alignment:
Q  147 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||| | ||||| || ||||||||||| ||||  |||||||    
T  8708978 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaacatctattctcttaggtctcctctcatcattcaatctttgct 8709077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 232
Target Start/End: Complemental strand, 51603829 - 51603678
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| ||||| ||||  ||||| |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| |||||||    
T  51603829 cgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacact 51603730  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |  |||| |  ||||||||||||||||| ||| |  | ||||||||||||||    
T  51603729 taaagcacactatctcagcaggagcatccctcttactcggcctcctctcatc 51603678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 232
Target Start/End: Complemental strand, 53750507 - 53750356
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| ||||| ||||  ||||| |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| |||||||    
T  53750507 cgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacact 53750408  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |  |||| |  ||||||||||||||||| ||| |  | ||||||||||||||    
T  53750407 taaagcacactatctcagcaggagcatccctcttactcggcctcctctcatc 53750356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 237
Target Start/End: Original strand, 27903590 - 27903776
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    ||||| |||||||  ||||| || ||||| ||||| || ||||| || |  || || ||||| ||||| || || || |||||||||||||| || || |    
T  27903590 tcattacagttataacaaacaatatctccacgcttgcattcagccaacacatgacctttctgaccacatctgaaacacttcttctcatctttggtgcaga 27903689  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||||| |||||||||||| ||||||||||||| |||| ||  ||| ||||||||||||||| | | |||| ||||||||| ||||    
T  27903690 cattactcttgtggcctttcgcaccacacttgtaacaaacaacatcaacaggagcatctctccccctaggccgcctctcatcattca 27903776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 248
Target Start/End: Original strand, 13879368 - 13879511
Alignment:
Q  105 cccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggag 204  Q
    ||||||| |||||| |  ||||| |||||||| || | | | || |||||||| |||||||| ||||||||||||||||| |||| |||||||| || |     
T  13879368 cccttctttccacatcggaagcacttcttctcctcatcattgcatacattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtagaaa 13879467  T
Q  205 catctctcctcttgggcctcctctcatctttcagcctttgctac 248  Q
    ||||||| ||||| || ||||||||||| ||||  |||||||||    
T  13879468 catctcttctcttaggtctcctctcatcattcaatctttgctac 13879511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 246
Target Start/End: Original strand, 14697401 - 14697501
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgc 245  Q
    |||| ||||||| || |||||||||||||||||  | ||||||| ||||||||||| ||||||| || |  | |||||||||||||| ||||  ||||||    
T  14697401 acaagcattactcttatggcctttctcaccacaagtatagcaaacaatctcagcagtagcatctttctttctaggcctcctctcatcattcaatctttgc 14697500  T
Q  246 t 246  Q
    |    
T  14697501 t 14697501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 8336 - 8399
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatct 209  Q
    |||| ||||||| ||||||||||||||||||||  | ||||| | ||||||| |||||||||||    
T  8336 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatct 8399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 15743 - 15685
Alignment:
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatct 209  Q
    ||||||| ||||||||||||||||||||  | ||||| | ||||||| |||||||||||    
T  15743 cattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatct 15685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 18224185 - 18224123
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 208  Q
    |||||||||||  |||||||||||||| ||||| ||| | |||| |||||| |||||||||||    
T  18224185 acaaacattacacttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatc 18224123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 51 - 237
Target Start/End: Original strand, 5287 - 5473
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| | |||||||||||| |||| ||||||| ||||||| ||||  |||||||| ||||| |||||||||||||||  ||| |    
T  5287 tcattgcagttataacaaacaacgtctccccgcttacaattagctaatgtgtgtcctttctaaccacacctgaagcacttcttctcatctttatcacaga 5386  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||||||  ||||||||||||| || ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||    
T  5387 cattactcctgtggcctttctcgccgcacttgtagcaaacaatctcagcaggagcatctctcctcgtgggcctcctctcatcattca 5473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 51 - 246
Target Start/End: Complemental strand, 5279 - 5084
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| |  |||| |||||| |||||||||||  ||||||||||||| |||||||| ||||| ||||||||||| |||  ||| |    
T  5279 tcattgcagttatagcaaacaacatctctccgcttacaatcagctaaagtgtgtcccttctgaccacacctgaagcacttcttctcatccttatcacaga 5180  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||| ||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| | |||| ||||||||  |||||||||||||    
T  5179 cattactcttgtggcctttttcgccacacttgtagcaaacaatctcagcaggagcatctctcctcctaggccacctctcattattcagcctttgct 5084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 51 - 238
Target Start/End: Original strand, 153726 - 153913
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| |||||||| ||||| |||||||||||| ||||||| ||||| |||||||| ||||| |||||||||||| ||  ||| |    
T  153726 tcattgcagttatagcaaacaatgtctccacgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaga 153825  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    ||||||| || |||| ||| |||||||||||| |||||| ||||||||  |||||||||||||||||||||||||||||||| |||||    
T  153826 cattactcttatggcttttttcaccacacttgaagcaaacaatctcagtgggagcatctctcctcttgggcctcctctcatcattcag 153913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 23508 - 23454
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagca 200  Q
    |||| ||||||| || |||||||||||||||||  ||||||||| ||||||||||    
T  23508 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagca 23454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 81 - 246
Target Start/End: Complemental strand, 4889 - 4724
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| ||||||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||  |||||||    
T  4889 cgcttgcaatcagctaacatgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaacattactcttgtggcctttctggccacact 4790  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    | || || |  ||||||||||||||||||||||| || |||||||||||||| ||||| |||||||    
T  4789 tataacagactatctcagcaggagcatctctcctatttggcctcctctcatcattcagtctttgct 4724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 88 - 244
Target Start/End: Complemental strand, 17517 - 17361
Alignment:
Q  88 aatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagca 187  Q
    |||| |||||| |||| ||||| ||  ||||||||||||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||| || ||    
T  17517 aatccgctaatgtgtgacccttttgatcacacctaaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttataaca 17418  T
Q  188 aagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttg 244  Q
    ||  ||||||||||||||||||||||| || |||||||||||||| ||||| |||||    
T  17417 aactatctcagcaggagcatctctcctattcggcctcctctcatcattcagtctttg 17361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 51 - 246
Target Start/End: Complemental strand, 9842 - 9647
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| |  ||||||||||| |||||| |||   ||||||| ||||| |||||||| ||||| ||||||||||| |||  ||| |    
T  9842 tcattgcagttatagcaaacaacatctccccgcttacaatcaactagggtgtgtcctttctgaccacacctgaagcacttcttctcatccttatcacaga 9743  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| || |||||||||||||| |||| ||||||||    
T  9742 cattactcttgtggcccttctcaccacacttgtagcaaacaatatcagcaggagcatctctcctgtttggcctcctctcatcattcatcctttgct 9647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 92; Significance: 9e-45; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 81 - 232
Target Start/End: Complemental strand, 98623 - 98472
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| ||||||||||   ||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  98623 cgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacact 98524  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||| ||||  |||||||||||||||||||||| ||||||||||||||||||    
T  98523 tgtaacaaacgatctcagcaggagcatctctccacttgggcctcctctcatc 98472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 81 - 238
Target Start/End: Original strand, 176251 - 176408
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||||||| ||||||| |||| |||||||||||| || |||||||||||      ||| |||||||| ||||||||||| ||||||||||    
T  176251 cgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggcctttttcaccacact 176350  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    || | || | |||||| | |||||||||||||||| | |||||||||||||| |||||    
T  176351 tgaaacagacaatctctgtaggagcatctctcctcctaggcctcctctcatcattcag 176408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 92; Significance: 9e-45; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 81 - 232
Target Start/End: Complemental strand, 4493 - 4342
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||||||| ||||||| ||||| |||||||| |||||||||||||||||| ||  |||||||||||| || ||||||||||| |||||||    
T  4493 cgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcatttcttctcatctctatcacaaacattactcttttggcctttctcgccacact 4394  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    || |||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  4393 tgaagcaaacaatatcagtaggagcatctctcctcttgggcctcctctcatc 4342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 208
Target Start/End: Complemental strand, 17097 - 16979
Alignment:
Q  90 tcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaa 189  Q
    ||||||||| |||| |||||||  |||||||  || ||||||||| | || |  | ||||||| | || |||||||||||||||||||| ||| | |||     
T  17097 tcagctaatgtgtgacccttcttgccacaccagaaacatttcttcacctcctctggacaaacagtgctcttgtggcctttctcaccacaattgaaacaag 16998  T
Q  190 gaatctcagcaggagcatc 208  Q
     ||||||||||||| ||||    
T  16997 taatctcagcaggaacatc 16979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 54 - 232
Target Start/End: Complemental strand, 882 - 704
Alignment:
Q  54 ttgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 153  Q
    ||||||||||  ||||| ||||| || ||||| |||||||||| | ||||||||||||| |||||||| ||||| |||||||||||| ||  ||||||||    
T  882 ttgcagttataacaaacaatgtccccacgcttacaatcagctagtgtgtgtcccttctgaccacacctgaagcacttcttctcatctctatcacaaacat 783  T
Q  154 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||| ||||||||||| |||||||||||| |||||  ||| || | |||||||||||||||||||||||||||||||||    
T  782 tactcttgtggcctttttcaccacacttgaagcaatcaatgtccgtaggagcatctctcctcttgggcctcctctcatc 704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 51 - 237
Target Start/End: Original strand, 37173 - 37359
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| || || || | ||| |||||||||| | ||||||||||||| |||||||| ||||| |||||||||||||||  |||||    
T  37173 tcattgcagttatagcaaacaatatccccacacttacaatcagctagtgtgtgtcccttctgaccacacctgaagcacttcttctcatctttatcacaaa 37272  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||||| |||||||||||||| ||||||||| |||||| ||| |||| |||||  |||||||||||||||||||||||||| ||||    
T  37273 cattactcttgtggcctttctcgccacacttgaagcaaaaaatatcagtaggagtgtctctcctcttgggcctcctctcatcattca 37359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 51 - 246
Target Start/End: Complemental strand, 8532 - 8337
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| | ||| || ||||| ||||||||||   ||||||||||||| |||||||| || || ||||||||||| ||||||||||    
T  8532 tcattgcagttataacaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatccttagtacaaa 8433  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||| |||||||| ||||| |||||||| || |||| ||| ||| || ||||||||||||||||||| ||||||||||| |||||||| ||||    
T  8432 cattactcttgtggccattctcgccacacttataacaaacaatatcaacatgagcatctctcctcttgggtctcctctcatcattcagcctctgct 8337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 51 - 246
Target Start/End: Complemental strand, 18746 - 18551
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| | ||| || ||||| ||||||||||   ||||||||||||| |||||||| || || ||||||||||| ||||||||||    
T  18746 tcattgcagttataacaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatccttagtacaaa 18647  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||| |||||||| ||||| |||||||| || |||| ||| ||| || ||||||||||||||||||| ||||||||||| |||||||| ||||    
T  18646 cattactcttgtggccattctcgccacacttataacaaacaatatcaacatgagcatctctcctcttgggtctcctctcatcattcagcctctgct 18551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 51 - 246
Target Start/End: Original strand, 34571 - 34766
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| | ||| || ||||| |||||| ||||| ||||||| ||||  |||||||| ||||| |||||||||||| ||  ||| |    
T  34571 tcattgcagttataacaaacaacgtccccacgcttacaatcaactaatgtgtgtcctttctaaccacacctgaagcacttcttctcatctctatcacaga 34670  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||| |||||||||||||||||||||||| | |||| ||| |||| ||||||||||||||||||||||||||||||||| || | ||||||||    
T  34671 cattactcttgtggcctttctcaccacacttgaaacaaacaatgtcagtaggagcatctctcctcttgggcctcctctcatcatttaacctttgct 34766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 100 - 238
Target Start/End: Complemental strand, 1869 - 1731
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    ||||||| ||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||  || |||||    
T  1869 tgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttatagcaaattatttcagc 1770  T
Q  200 aggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    || ||||||||||||||||||||| |||||||| |||||    
T  1769 agtagcatctctcctcttgggccttctctcatcattcag 1731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 100 - 246
Target Start/End: Complemental strand, 566 - 420
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    ||||||| ||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||  ||||||  |||||||     
T  566 tgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcagt 467  T
Q  200 aggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||||||||||||||||| || |||||||| ||||||| |||||    
T  466 aggagcatctctcctcttgggtcttctctcatcattcagccgttgct 420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 66 - 239
Target Start/End: Original strand, 8863 - 9036
Alignment:
Q  66 caaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 165  Q
    ||||| ||||| || ||||| ||||||||||   ||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||||||    
T  8863 caaacaatgtcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggc 8962  T
Q  166 ctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagc 239  Q
    | ||||| |||||||| || |||| ||||||| |||||||||||||||||||||| || |||||||| ||||||    
T  8963 cattctcgccacacttataacaaacaatctcatcaggagcatctctcctcttgggtcttctctcatcattcagc 9036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 51 - 232
Target Start/End: Original strand, 15306 - 15487
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| |  || || ||||| ||||||||||   ||||||  ||||| |||||||| ||||| |||||||| || ||||||||||    
T  15306 tcattgcagttataacaaacaacatcaccacgcttgcaatcagctagagtgtgtcatttctgaccacacctgaagcacttcttctcgtccttagtacaaa 15405  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||| |||||||||||||| |||||||| ||||| | |||||||||||||||||||||||| |||||||||||||||||    
T  15406 cattactcttgtggcctttctcgccacacttatagcagaaaatctcagcaggagcatctctcctattgggcctcctctcatc 15487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 51 - 244
Target Start/End: Original strand, 22356 - 22549
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| |  || || ||||| |||||| |||   ||||||| ||||| |||||| | ||||||||||||||||| |||||| |||    
T  22356 tcattgcagttatagcaaacaacatcaccacgcttgcaatcaactagggtgtgtcctttctgaccacacttgaagcatttcttctcatccttagtaaaaa 22455  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttg 244  Q
    ||||||| |||||||||||||| ||||||||||| ||||  |||||| |||||||||||||||| ||||||||||||||||| ||||| |||||    
T  22456 cattactcttgtggcctttctcgccacacttgtaacaaacgatctcaacaggagcatctctcctattgggcctcctctcatcattcagtctttg 22549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 1656 - 1496
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  ||||||||||||| |||||||| ||||| ||| |||||||||||  |||||||||||| ||||| |||||||    
T  1656 atgtccccacgcttgcattcagctaaactgtgtcccttctgaccacacctgaagcacttcctctcatctttaccacaaacattactcttgtgtcctttct 1557  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||||||||| |||| |||||||| |||||||||||||||||| |||||||| |||||    
T  1556 caccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatc 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 4344 - 4188
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||| ||| ||||||| ||||| |||||||||||||| ||||||||||||  |  ||| ||||||||||||| | |||||||||||||||    
T  4344 cgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacacacattacttttgtagtctttctcaccacact 4245  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    || |||||| |||||||| |||||||||||||||||| |||||||||||||| ||||    
T  4244 tgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattca 4188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 51 - 231
Target Start/End: Complemental strand, 23563417 - 23563237
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  |||||  ||||||| | ||| || ||||||| | ||||||| ||||| |||||||| ||||| |||||||||||| ||  ||| |    
T  23563417 tcattgcagttataacaaacattgtctccacccttacagtcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaga 23563318  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcat 231  Q
    ||||||| ||||||||||| |||||||||||| |||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  23563317 cattactcttgtggcctttttcaccacacttgaagcaaacaatgtcagtaggagcatctctcctcttgggcctcctctcat 23563237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 232
Target Start/End: Original strand, 20345450 - 20345582
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    |||| |||||||| |||||||| ||||| ||| | |||||||||  |||||||||||| |||||| ||||||||||||||||||| |||| |||||||||    
T  20345450 tgtgacccttctgaccacacctgaagcacttcctatcatctttaccacaaacattactcttgtgggctttctcaccacacttgtaacaaacaatctcagc 20345549  T
Q  200 aggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||||||||||||||||||||||| |||||    
T  20345550 aggagcatctctcctcttgggcctcctatcatc 20345582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 100 - 232
Target Start/End: Original strand, 25851240 - 25851372
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    |||| |||||||| |||||||| ||||| ||| | |||||||||  |||||||||||| ||||||||||||||||||||||||||||||| ||||||| |    
T  25851240 tgtgacccttctgaccacacctgaagcacttcctatcatctttaccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaac 25851339  T
Q  200 aggagcatctctcctcttgggcctcctctcatc 232  Q
    | ||||||||||||||||||||||||| |||||    
T  25851340 aagagcatctctcctcttgggcctcctatcatc 25851372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 66 - 237
Target Start/End: Complemental strand, 23078139 - 23077968
Alignment:
Q  66 caaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 165  Q
    ||||| |||||||| ||||| || |||||||   ||||||| ||||| |||||||| || |||||| |||||||| ||  |||| |||| ||||||||||    
T  23078139 caaacaatgtctccacgcttacattcagctagggtgtgtcctttctgaccacacctgaaacatttcctctcatctctaccacaagcattgcttttgtggc 23078040  T
Q  166 ctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||| |||||||||||| | || | |||||||||||||||||||||||||||||||||||| ||||| ||||    
T  23078039 ctttttcaccacacttgaaacatacaatctcagcaggagcatctctcctcttgggcctcctatcatcattca 23077968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 72 - 237
Target Start/End: Original strand, 22505819 - 22505984
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  | |||||| |||| |||||||| ||||| ||| |||| ||||||  ||||||||| || |||||||||||||    
T  22505819 atgtccccacgcttacattcagctaagctatgtcccatctgaccacacctgaagcacttcctctcgtctttaccacaaacattgctcttgtggcctttct 22505918  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||||||||||| |||| |||||||| |||||||||||||||||| |||||||| ||||| ||||    
T  22505919 caccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattca 22505984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 232
Target Start/End: Complemental strand, 14884191 - 14884059
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    |||| |||||||| |||||||| ||||| ||| | |||||| |   ||| |||||||| |||||||||||||||||||||||||| |||| |||||||||    
T  14884191 tgtgacccttctgaccacacctgaagcacttcctatcatctctcccacagacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagc 14884092  T
Q  200 aggagcatctctcctcttgggcctcctctcatc 232  Q
     |||||||||||||||||||||||||| |||||    
T  14884091 tggagcatctctcctcttgggcctcctatcatc 14884059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 23669847 - 23669946
Alignment:
Q  147 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||||||| |||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||| || ||||||||||| ||||  |||||||    
T  23669847 caaacattactcttgtggcctttctcaccacactggtaggaaacaatctcagcaggagcatctctcctcttaggtctcctctcatcattcaatctttgct 23669946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 16258189 - 16258104
Alignment:
Q  147 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  16258189 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatc 16258104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 22591908 - 22591823
Alignment:
Q  147 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  22591908 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatc 22591823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 22595463 - 22595378
Alignment:
Q  147 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  22595463 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatc 22595378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 21870432 - 21870341
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||||||||||| |||||| ||||||||||||||||| ||||||  ||||||| |||||||||||||||||| ||||||||| |||| ||||    
T  21870432 acaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcattca 21870341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 21874712 - 21874621
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||||||||||| |||||| ||||||||||||||||| ||||||  ||||||| |||||||||||||||||| ||||||||| |||| ||||    
T  21874712 acaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcattca 21874621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 232
Target Start/End: Complemental strand, 17266553 - 17266402
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| ||||| ||||  ||||| ||||||||||||||||| ||||| ||||||||||| |  |||||||| ||||| ||||| |||||||| |||||||    
T  17266553 cgcttgcaatcggctagcatgtgacccttctgtccacacctgaagcacttcttctcatcctcggtacaaacgttactcttgtgacctttctcgccacact 17266454  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |  | || |  ||||||||||||||||| ||| |  | ||||||||||||||    
T  17266453 taaaacacactatctcagcaggagcatccctcttactcggcctcctctcatc 17266402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 21983328 - 21983231
Alignment:
Q  149 aacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||||| |||||||| |||||||||||| | ||||||| ||||||||||||| ||||||| ||||| || ||||||||||| ||||  |||||||    
T  21983328 aacattactcttgtggcccttctcaccacacctatagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaatctttgct 21983231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 21561176 - 21561088
Alignment:
Q  149 aacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||||||| |||||||| |||| |||||||||| |||||| ||||||||||||| ||||||| ||||| || ||||||||||| ||||    
T  21561176 aacattactcttgtggcccttcttaccacacttgaagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattca 21561088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 43122685 - 43122781
Alignment:
Q  150 acattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    |||||||| ||||||||  |||| |||||||||||||||| |||||| ||| || ||||||||||||| || ||||||||||| ||||  |||||||    
T  43122685 acattactcttgtggcccctctcgccacacttgtagcaaacaatctctgcatgaacatctctcctcttaggtctcctctcatcattcaatctttgct 43122781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 237
Target Start/End: Original strand, 22465084 - 22465255
Alignment:
Q  66 caaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 165  Q
    ||||| || ||||| ||||| || ||||| || || || |||||||| || || || || ||||||||||||||||   | ||| ||||||| |||||||    
T  22465084 caaacgatatctccacgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttggatgcaagcattactcttgtggc 22465183  T
Q  166 ctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    | ||| ||||||| ||||| |||| ||  ||| ||||||||| ||||| ||| |||  ||||||||| ||||    
T  22465184 ccttcacaccacatttgtaacaaataacatcaacaggagcatttctccccttaggctgcctctcatcattca 22465255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 28892176 - 28892053
Alignment:
Q  66 caaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 165  Q
    ||||| |||||||||||||| || ||||| || |  || || ||||| || || || || |||||||||||||||| ||| ||| ||||||| |||||||    
T  28892176 caaacgatgtctccccgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggc 28892077  T
Q  166 ctttctcaccacacttgtagcaaa 189  Q
    | ||| ||||||| ||||| ||||    
T  28892076 ccttcacaccacatttgtaacaaa 28892053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 18782346 - 18782408
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 208  Q
    |||||||||||| |||||||||||||| ||||| ||| | |||| |||||| |||||||||||    
T  18782346 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatc 18782408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 232
Target Start/End: Complemental strand, 26735882 - 26735796
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||| ||||||| || ||||||||||||| |||  ||||||||| ||||||| ||||||||||| || |  | ||||||||||||||    
T  26735882 acaagcattactcttatggcctttctcacaacaagtgtagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatc 26735796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 20824647 - 20824728
Alignment:
Q  126 catttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcat 207  Q
    |||||||||||||||| ||| ||| ||||||| |||||||| ||| ||||||| ||||| |||| ||  ||| |||||||||    
T  20824647 catttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatttgtaacaaacaacatcaacaggagcat 20824728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 244
Target Start/End: Complemental strand, 21631556 - 21631455
Alignment:
Q  143 agtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctt 242  Q
    ||||||| |||||||  |||||||||||||||||||  ||||||||| || |||||||| || |||| || |  | ||||||||| |||| |||| ||||    
T  21631556 agtacaagcattactcgtgtggcctttctcaccacaagtgtagcaaacaacctcagcagtagtatctttctttctaggcctcctcacatcattcaccctt 21631457  T
Q  243 tg 244  Q
    ||    
T  21631456 tg 21631455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 246
Target Start/End: Original strand, 23474426 - 23474526
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgc 245  Q
    |||| ||||||| || |||||||||||||||||  ||||||||| ||||||||||  | | ||| || |  |||||||||||||||| ||||  ||||||    
T  23474426 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagcaacaacttctttctttctgggcctcctctcatcattcaatctttgc 23474525  T
Q  246 t 246  Q
    |    
T  23474526 t 23474526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 20779086 - 20779170
Alignment:
Q  105 cccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaa 189  Q
    |||||||| || || || || ||||||||||||||||  || ||| ||||||| |||||||| ||| ||||||| ||||| ||||    
T  20779086 cccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcccttcacaccacatttgtaacaaa 20779170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 54 - 232
Target Start/End: Original strand, 6042 - 6220
Alignment:
Q  54 ttgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 153  Q
    ||||||||||  ||||| ||||| || ||||| |||||||||| | ||||||| ||||| ||||| || ||||| |||||||||||| ||  ||| ||||    
T  6042 ttgcagttataacaaacaatgtccccacgcttgcaatcagctagtgtgtgtcctttctgaccacatctgaagcacttcttctcatctctatcacagacat 6141  T
Q  154 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||| ||||||||||| |||||||||||| |||||| ||| |||| | |||||||||||||||||||||||||||||||    
T  6142 tactcttgtggcctttttcaccacacttgaagcaaacaatgtcagtaagagcatctctcctcttgggcctcctctcatc 6220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 52 - 238
Target Start/End: Original strand, 115797 - 115983
Alignment:
Q  52 cattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 151  Q
    ||||||| ||||  || ||||| || || ||||| ||||||||||| | ||| ||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  115797 cattgcaattatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaac 115896  T
Q  152 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    ||||||||||||||||||||| ||||||||  ||||||  || ||||||||||  ||||| | ||||||||| |||||||| |||||    
T  115897 attacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctcttcccttgggccttctctcatcattcag 115983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 93889 - 93808
Alignment:
Q  126 catttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcat 207  Q
    |||||||||||||||| ||| ||| ||||||| |||||||| ||| ||||||| ||||| |||| || |||| |||||||||    
T  93889 catttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatttgtaacaaacaacctcaacaggagcat 93808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 81 - 238
Target Start/End: Original strand, 16901 - 17058
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||| ||| ||||||| ||||| |||||||||||||| ||||||||||||  |  ||| |||||||| |||||||||||||| |||||||    
T  16901 cgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacacacattactcttgtggcctttctctccacact 17000  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    || | |||| |||||||| |||||||||||||||||| |||||||||||||| |||||    
T  17001 tgaaacaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcag 17058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 81 - 246
Target Start/End: Original strand, 40322 - 40487
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| ||||| ||||| ||||| |||||||  |||||||| ||||| ||||| |||||||| |||||||||||||| |||||||||||||| |||||||    
T  40322 cgcttgcaatccgctaacatgtgacccttctaaccacacctgaagcacttcttatcatctttggtacaaacattactcttgtggcctttctcgccacact 40421  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    | || || |  ||||||||||||||||||||||| || |||||||||||||| ||||| |||||||    
T  40422 tataacagactatctcagcaggagcatctctcctattcggcctcctctcatcattcagtctttgct 40487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 51 - 232
Target Start/End: Complemental strand, 953 - 772
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||   |||| ||||| || ||||| ||||||||||   ||| ||| ||||| |||||||| ||||| |||||||||||| ||  |||||    
T  953 tcattgcagttataataaacaatgtccccacgcttacaatcagctagagtgtatcctttctgaccacacctgaagcacttcttctcatctctatcacaaa 854  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    | ||||| ||||||||||| |||||||||||| |||||| |||||| | |||||||||||||||||||||||||||||||||    
T  853 cgttactcttgtggcctttttcaccacacttgaagcaaacaatctcggtaggagcatctctcctcttgggcctcctctcatc 772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 54 - 238
Target Start/End: Complemental strand, 939 - 755
Alignment:
Q  54 ttgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 153  Q
    ||||||||||  ||||| ||||| || ||||| |||||||||| | ||||||| ||||| |||||| | ||||| |||||||||||| ||  ||| ||||    
T  939 ttgcagttatagcaaacaatgtcaccacgcttacaatcagctagtgtgtgtcctttctgaccacacatgaagcacttcttctcatctctatcacagacat 840  T
Q  154 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    |||| ||||||||||| |||||||||||| |||||| ||| ||   ||||||||||||||||||||||||||||||||| |||||    
T  839 tactcttgtggcctttttcaccacacttgaagcaaacaatatccataggagcatctctcctcttgggcctcctctcatcattcag 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 81 - 241
Target Start/End: Complemental strand, 1351 - 1191
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| || ||||||||  ||||||| ||||| |||||||| ||||| |||||||||||| ||  |||| ||||||| ||||||||||| ||||||||||    
T  1351 cgcttacattcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaagcattactcttgtggcctttttcaccacact 1252  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcct 241  Q
    || | ||||  ||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  1251 tgaaacaaattatctcagtaggagcatctctcctcttgggcctcctctcatcattcagcct 1191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 81 - 241
Target Start/End: Original strand, 1984 - 2144
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||||||  | ||||| |||||||||||||||||||| ||||||||||||     ||| |||||||| ||||||||||||||||||||||    
T  1984 cgcttacaatcagctaaagtatgtcctttctgtccacacctaaagcacttcttctcatctcggtcacacacattactcttgtggcctttctcaccacact 2083  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcct 241  Q
    || |||||| ||| |||| ||||||||||| |||||| |||||||||||||| ||||||||    
T  2084 tgaagcaaataatttcagtaggagcatctcacctcttaggcctcctctcatcattcagcct 2144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 81 - 241
Target Start/End: Original strand, 8008 - 8168
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| || ||||||||  ||||||| ||||| |||||||| ||||| |||||||||||| ||  |||| ||||||| ||||||||||| ||||||||||    
T  8008 cgcttacattcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaagcattactcttgtggcctttttcaccacact 8107  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcct 241  Q
    || | ||||  ||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  8108 tgaaacaaattatctcagtaggagcatctctcctcttgggcctcctctcatcattcagcct 8168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 51 - 211
Target Start/End: Complemental strand, 924 - 764
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| || || || ||||| ||||||||||   ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||    
T  924 tcattgcagttataacaaacaatatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaa 825  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctct 211  Q
    ||||||| || ||||||||||  ||||||||||| |||| |||||||||||||||||||||    
T  824 cattactcttatggcctttcttgccacacttgtaacaaacaatctcagcaggagcatctct 764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 53463 - 53307
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||| |||  |||||||| || || |||||||| || |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  53463 cgcttgcaatcaactaggatgtgtcctttttgaccacacctgaatcatttcttctcatccttagtacaaacattactcttgtggcctttctcgccacact 53364  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||| ||||  ||| ||||| ||||||||||||| ||||||||||||||||| ||||    
T  53363 tgtaacaaacgatcccagcaagagcatctctcctattgggcctcctctcatcattca 53307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 41990 - 42150
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  41990 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 42089  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||    
T  42090 caccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatc 42150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 164441 - 164285
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||| ||||  ||||||| ||||| |||||||| || || ||||||||||| |||| |||||||||||| |||||||||||||| |||||||    
T  164441 cgcttgcaatcaactaaagtgtgtcctttctgaccacacctgaaacacttcttctcatccttagaacaaacattactcttgtggcctttctcgccacact 164342  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||| ||||  |||||||||||||| |||||||| ||||||||||||||||| ||||    
T  164341 tgtaacaaacgatctcagcaggagcgtctctcctattgggcctcctctcatcattca 164285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 232
Target Start/End: Complemental strand, 43428 - 43342
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||| ||||||| ||||||||||||||||||||  | ||||| | ||| |||||| || ||||| || ||||||||| ||| |||||    
T  43428 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatttcagcaagaccatctttcttcttgggccgcctatcatc 43342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 51 - 246
Target Start/End: Original strand, 54281 - 54476
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| |  || || ||||| |||| |||||   ||||||||||||| |||||||| || || ||||||||||||||||||||||    
T  54281 tcattgcagttataacaaacaacatcaccacgcttgcaataagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatctttagtacaaa 54380  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||| |||||||||||||| ||||||||||| ||||  ||||||||| |||||| ||  || ||||||||||||||||| |||| ||| ||||    
T  54381 cattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaagagcatttcatctattgggcctcctctcatcattcaacctctgct 54476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 51 - 232
Target Start/End: Complemental strand, 354 - 173
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| ||||| || ||||| |||||||||| | ||||||  ||||| |||||| | ||||| |||||||||||| ||  ||| |    
T  354 tcattgcagttataacaaacaatgtccccacgcttacaatcagctagtgtgtgtcttttctgaccacacatgaagcacttcttctcatctctatcacaga 255  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||| |||||||||||||| ||||||||| |||||| ||| |||| |||||| ||||| ||||||||||||||||||||    
T  254 cattactcttgtggcctttctcgccacacttgaagcaaacaatatcagtaggagcctctctgctcttgggcctcctctcatc 173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 78; Significance: 2e-36; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 81 - 238
Target Start/End: Complemental strand, 64642 - 64485
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||| ||||| | ||||||| ||||| |||||||| || |||||||||||||| || |||||||||||||| |||||||||||||| |||||||    
T  64642 cgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggcctttctcgccacact 64543  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    |||| ||||  ||||||||||||||||| ||||| || |||||||| ||||| |||||    
T  64542 tgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcag 64485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 232
Target Start/End: Original strand, 29873 - 30039
Alignment:
Q  66 caaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 165  Q
    ||||| ||||| || | ||| ||||||||||   |||||||||| || |||||||| ||||| |||||||||||| ||  |||||| ||||| |||||||    
T  29873 caaacgatgtccccacacttacaatcagctagagtgtgtcccttttgaccacacctgaagcacttcttctcatctctatcacaaacgttactcttgtggc 29972  T
Q  166 ctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||||||||||||| ||||||  || |||| |||| ||||||||||||||||||||||||||||    
T  29973 ctttctcaccacacttgaagcaaactatgtcagtaggaacatctctcctcttgggcctcctctcatc 30039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 81 - 238
Target Start/End: Complemental strand, 49220 - 49063
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||| ||||| | ||||||| ||||| |||||||| || |||||||||||||| || |||||||||||||| |||||||| ||||| |||||||    
T  49220 cgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggcccttctcgccacact 49121  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    |||| ||||  ||||||||||||||||| ||||| || |||||||| ||||| |||||    
T  49120 tgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcag 49063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 81 - 238
Target Start/End: Complemental strand, 58254 - 58097
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||| ||||| | ||||||| ||||| |||||||| || |||||||||||||| || |||||||||||||| |||||||| ||||| |||||||    
T  58254 cgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggcccttctcgccacact 58155  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    |||| ||||  ||||||||||||||||| ||||| || |||||||| ||||| |||||    
T  58154 tgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcag 58097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 100 - 237
Target Start/End: Complemental strand, 514374 - 514237
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    ||||||||||||| |||||||| ||||| ||| |||| ||||||  ||||||||| || |||||||||||||||||||||||||| |||| ||||||||     
T  514374 tgtgtcccttctgaccacacctgaagcacttcctctcgtctttaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcaga 514275  T
Q  200 aggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||||||||||||||||| |||||||| ||||| ||||    
T  514274 aggagcatctctcctcttaggcctcctatcatcattca 514237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 81 - 237
Target Start/End: Original strand, 5704 - 5860
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||||||  ||||||| ||||| |||||||||||||| ||||||||||||  |  ||| || ||||| ||||||||||||||||||||||    
T  5704 cgcttacaatcagctaaagtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacacacgttactcttgtggcctttctcaccacact 5803  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    || ||||||  ||||||| ||||||||||||||||||  ||||||||||||| ||||    
T  5804 tgaagcaaattatctcagtaggagcatctctcctcttaagcctcctctcatcattca 5860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 232
Target Start/End: Complemental strand, 11774 - 11632
Alignment:
Q  90 tcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaa 189  Q
    ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||| |||||||| ||||||||||||| |||||||||||| || |    
T  11774 tcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacatacattactcttgtggcctttcttaccacacttgtatcata 11675  T
Q  190 gaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
     ||||||| | || |||||||||||||||||| |||| |||||    
T  11674 caatctcatctggtgcatctctcctcttgggcttcctatcatc 11632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 81 - 241
Target Start/End: Original strand, 70372 - 70532
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||| ||| ||||||| ||||||||||| || || || ||||||||||||     ||| |||||||| ||||||||||||||||||||||    
T  70372 cgcttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatctcggtcacacacattactcttgtggcctttctcaccacact 70471  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcct 241  Q
    |  |||||| |||||||| |||||||||||||||||| |||||||||||||| ||||||||    
T  70472 taaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcct 70532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 801 - 924
Alignment:
Q  114 ccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcc 213  Q
    |||||||| ||| | |||||||||||||||  ||| |||||||| |||||||||||||  |||||||||||||||| |||||||||||||||||||||||    
T  801 ccacacctgaagtacttcttctcatctttatcacagacattactcttgtggcctttctagccacacttgtagcaaacaatctcagcaggagcatctctcc 900  T
Q  214 tcttgggcctcctctcatctttca 237  Q
    |||| |||||||||||||| ||||    
T  901 tcttaggcctcctctcatcattca 924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 72 - 237
Target Start/End: Complemental strand, 852 - 687
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  |||||||||| || |||||||| ||||| ||| |||| ||||||  ||||||||| || |||||||||||||    
T  852 atgtccccacgcttacattcagctaaactgtgtcccttttgaccacacctgaagcacttcctctcgtctttaccacaaacattgctcttgtggcctttct 753  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||| ||||||| |||| |||||||| |||||||||||||||||| |||||||| ||||| ||||    
T  752 caccaaacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattca 687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 23972 - 23812
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||| |||||||| |||||||||||||    
T  23972 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacatacattactcttgtggcctttct 23873  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||||||||| |||| ||||||| |||||||||||||||||||||||||||| |||||    
T  23872 caccacacttgtatcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatc 23812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 716 - 876
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  |||| |||||||| || ||||| ||||| ||| |||||||||||  ||||||||| || ||||||||||| |    
T  716 atgtccccacgcttacattcagctaaattgtgacccttctgaccgcacctgaagcacttcctctcatctttaccacaaacattgctcttgtggccttttt 815  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||||||||| |||| |||||||| |||||||||||||||||| |||||||| |||||    
T  816 caccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatc 876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 81 - 241
Target Start/End: Complemental strand, 43459 - 43299
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||||||  ||||||| |||||||||||||||||||| ||||||||||||  |  ||| |||||||| |||||||| || |||| |||||    
T  43459 cgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcatctcgatcacacacattactcttgtggcccttttcacgacact 43360  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcct 241  Q
    || | || | |||||||  |||||||||||||||||| |||||||||||||| ||||||||    
T  43359 tgaaacagacaatctcattaggagcatctctcctcttaggcctcctctcatcattcagcct 43299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 82 - 246
Target Start/End: Complemental strand, 63558 - 63394
Alignment:
Q  82 gcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacactt 181  Q
    |||| |||||||||||  ||||||| ||||| |||||||| || || ||||||||||||     |||||||||||| ||||||||||| |||||||||||    
T  63558 gcttacaatcagctaaagtgtgtcctttctgaccacacctgaaacacttcttctcatctcggtcacaaacattactcttgtggcctttatcaccacactt 63459  T
Q  182 gtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    | | |||| ||| |||| ||||||||||||||||||||||||||||||||| ||||  |||||||    
T  63458 gaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcaatctttgct 63394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 82 - 241
Target Start/End: Original strand, 51916 - 52075
Alignment:
Q  82 gcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacactt 181  Q
    |||| |||| ||||||  ||||||| ||||  |||||||||||||| ||||||||||||  |  ||| |||||||| |||||||||||||||||||||||    
T  51916 gcttgcaataagctaaagtgtgtcctttcttaccacacctaaagcacttcttctcatctcgatcacatacattactcttgtggcctttctcaccacactt 52015  T
Q  182 gtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcct 241  Q
    | | || | |||||||| |||||||||||||||| | |||||||||||||| ||||||||    
T  52016 gaaacagataatctcagtaggagcatctctcctcctaggcctcctctcatcattcagcct 52075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 66 - 237
Target Start/End: Original strand, 251868 - 252039
Alignment:
Q  66 caaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 165  Q
    ||||| |||||||| ||||| || ||||||| | ||||||| ||||| ||||||||||| |||||| |||||||| ||  |||| |||  ||||||||||    
T  251868 caaacaatgtctccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacatttcctctcatctctaccacaagcatagcttttgtggc 251967  T
Q  166 ctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||| |||||||||||| | || | ||||||| || ||||||||||||||||||||||||| ||||| ||||    
T  251968 ctttttcaccacacttgaaacacacaatctcaacaagagcatctctcctcttgggcctcctatcatcattca 252039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 229827 - 229765
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 208  Q
    ||||||||| || |||||||||||||||||||| ||| | |||| |||||| |||||||||||    
T  229827 acaaacattgctcttgtggcctttctcaccacaattgaaacaaacaatctccgcaggagcatc 229765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 263496 - 263647
Alignment:
Q  87 caatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagc 186  Q
    ||||| ||||| | ||| |||||||| |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||||||  | |    
T  263496 caatccgctaaaaggtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaac 263595  T
Q  187 aaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    |||  |||||||||||||||||||||||   ||||||||||||||| |||||    
T  263596 aaactatctcagcaggagcatctctcctaacgggcctcctctcatcattcag 263647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 237
Target Start/End: Complemental strand, 1557 - 1371
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    ||||||||||| |  ||||| ||||| || | ||| || |||||||   ||||||||||||  ||||||||||| |||||| || ||||| ||  ||||     
T  1557 tcattgcagttgtagcaaacaatgtccccacacttacattcagctagggtgtgtcccttctaaccacacctaaaacatttcctcacatctctaccacaag 1458  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||| || ||||||||||| |||||||||||||| || | |||||||||||||||||||||||||||||||||||| ||||| ||||    
T  1457 cattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggagcatctctcctcttgggcctcctatcatcattca 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 246
Target Start/End: Complemental strand, 6297 - 6132
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| ||||||||||  | ||| |||||||| |||||||| ||||| ||||||||||| || |||||||| ||||| |||||||||||||| |||||||    
T  6297 cgcttacaatcagctagcacgtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacact 6198  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    |  | ||||  |||||  |||||||||||||||| || |||||||||||||| ||||| |||||||    
T  6197 taaaacaaactatctcgacaggagcatctctcctattcggcctcctctcatcattcagtctttgct 6132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 232
Target Start/End: Original strand, 50339 - 50520
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    ||||||||||| |  ||||| || || || ||||| |||||||||||  ||||||| ||||| |||||||| || || ||||||||||||     |||||    
T  50339 tcattgcagttgtagcaaacaatatccccacgcttacaatcagctaaggtgtgtcctttctgaccacacctgaaacacttcttctcatctcggtcacaaa 50438  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    ||||||| |||||| |||| |||||||||||| | |||| ||| |||| |||||||||||||||||||||||||||||||||    
T  50439 cattactcttgtggtctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatc 50520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 81 - 237
Target Start/End: Original strand, 5445 - 5600
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||||||  ||||||| ||||| |||||||| ||||| ||||||||||||     |||||||||||| ||||||||||| ||||||||||    
T  5445 cgcttacaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctcggtcacaaacattactcttgtggcctttttcaccacact 5544  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    || | |||| ||| |||| |||||||||||||||||| |||||||||||||| ||||    
T  5545 tgaaacaaacaatatcagtaggagcatctctcctctt-ggcctcctctcatcattca 5600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 88 - 232
Target Start/End: Complemental strand, 575 - 431
Alignment:
Q  88 aatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagca 187  Q
    |||| |||||| ||||||| ||||| |||||||| ||||| |||||||||||| ||  ||||||| ||||||||||||||||||| ||||||||| | ||    
T  575 aatctgctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctgtatcacaaacactacttttgtggcctttctcgccacacttgaaaca 476  T
Q  188 aagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    || ||| ||   |||||||||||||||||||||||| ||||||||    
T  475 aacaatatctataggagcatctctcctcttgggccttctctcatc 431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 62812 - 62656
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||||||  ||||| | ||||| |||||||||||||| ||||||||||| |    ||| |||||||| ||||||||||||||||||||||    
T  62812 cgcttacaatcagctaaagtgtgtactttctgaccacacctaaagcacttcttctcatcatggtcacatacattactcttgtggcctttctcaccacact 62713  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    || |  ||| ||| |||| |||||||||||||||||| |||||||||||||| ||||    
T  62712 tgaattaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattca 62656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 208
Target Start/End: Complemental strand, 65319 - 65211
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    ||||||| ||||| |||||||| ||||| || ||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||| || ||||||    
T  65319 tgtgtcctttctgaccacacctgaagcactttttctcatctttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaacaacctcagc 65220  T
Q  200 aggagcatc 208  Q
    |||||||||    
T  65219 aggagcatc 65211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 232
Target Start/End: Complemental strand, 9827 - 9676
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| ||||| ||||| | ||| |||||||  |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||    
T  9827 cgcttgcaatccgctaaaaggtgacccttctaaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacact 9728  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |  | ||||  |||||||||||||||||||||||   |||||||||||||||    
T  9727 taaaacaaactatctcagcaggagcatctctcctaacgggcctcctctcatc 9676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 238
Target Start/End: Original strand, 203651 - 203802
Alignment:
Q  87 caatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagc 186  Q
    ||||| ||||| | ||| |||||||| |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||||||  | |    
T  203651 caatccgctaaaaggtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaac 203750  T
Q  187 aaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    |||  |||||| ||||||||||||||||   ||||||||||||||| |||||    
T  203751 aaactatctcaccaggagcatctctcctaacgggcctcctctcatcattcag 203802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 424637 - 424697
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagca 206  Q
    ||||||||| ||||||||||||||| ||||||| ||| |||| | |||||||| |||||||    
T  424637 acaaacattgcttttgtggcctttcacaccacagttgaagcacacaatctcagtaggagca 424697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 1302 - 1188
Alignment:
Q  123 aagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcc 222  Q
    ||||| ||| |||||||| ||  ||||||||| || |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |    
T  1302 aagcacttcctctcatctctaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggtc 1203  T
Q  223 tcctctcatctttca 237  Q
    |||| ||||| ||||    
T  1202 tcctatcatcattca 1188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 51 - 237
Target Start/End: Original strand, 11211 - 11397
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    ||||||||||| |  || || ||||| || ||||| || ||||||| |  |||||||||||| |||||||| ||||| ||| |||||||| ||  ||||     
T  11211 tcattgcagttgtagcagacaatgtccccacgcttacattcagctagtgcgtgtcccttctgaccacacctgaagcacttcctctcatctctaccacaag 11310  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||| || ||||||||||| |||||||||||||| |||| |||||||| |||||||||||||||||| || ||||| ||||| ||||    
T  11311 cattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggactcctatcatcattca 11397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 51 - 188
Target Start/End: Complemental strand, 12482 - 12345
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| ||||| || ||||| |||||| ||||| ||||||| |||||  ||||||||||||| |||||||||||||||  | |||    
T  12482 tcattgcagttataacaaacaatgtccccacgcttacaatcatctaatgtgtgtcctttctgagcacacctaaagcacttcttctcatctttacgaaaaa 12383  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaa 188  Q
    ||||||| |||||||||||||| ||||||||| |||||    
T  12382 cattactcttgtggcctttctcgccacacttgaagcaa 12345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 51 - 188
Target Start/End: Complemental strand, 20662 - 20525
Alignment:
Q  51 tcattgcagttatctcaaactatgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 150  Q
    |||||||||||||  ||||| ||||| || ||||| |||||| ||||| ||||||| |||||  ||||||||||||| |||||||||||||||  | |||    
T  20662 tcattgcagttataacaaacaatgtccccacgcttacaatcatctaatgtgtgtcctttctgagcacacctaaagcacttcttctcatctttacgaaaaa 20563  T
Q  151 cattacttttgtggcctttctcaccacacttgtagcaa 188  Q
    ||||||| |||||||||||||| ||||||||| |||||    
T  20562 cattactcttgtggcctttctcgccacacttgaagcaa 20525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 42981 - 43118
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    ||||||| ||||| | |||||||||||| ||||||||||||     |||||||||||| |||||||||||||||| ||||||| | ||||  |||||||     
T  42981 tgtgtcctttctgactacacctaaagcacttcttctcatctcggtcacaaacattactcttgtggcctttctcacaacacttgaaacaaattatctcagt 43080  T
Q  200 aggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  43081 aggagcatctctcctcttaggcctcctctcatcattca 43118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 50320 - 50258
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 208  Q
    |||| |||| ||||||||||||||||||||||| ||  |||| | ||||||||||||| ||||    
T  50320 acaagcattgcttttgtggcctttctcaccacaattaaagcagacaatctcagcaggaacatc 50258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 90 - 237
Target Start/End: Complemental strand, 30357 - 30210
Alignment:
Q  90 tcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaa 189  Q
    ||||||| | ||||||| ||||  ||||||||||| |||||| ||| |||| ||  |||| |||| || ||||||||||| ||||||||||| || ||||    
T  30357 tcagctagtttgtgtcctttcttaccacacctaaaacatttcctcttatctctaccacaagcattgctcttgtggcctttttcaccacacttataacaaa 30258  T
Q  190 gaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
     ||||||||||||||||||| |||||||||||||||| ||||| ||||    
T  30257 caatctcagcaggagcatctttcctcttgggcctcctgtcatcattca 30210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 5877 - 5785
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    |||||||||||| ||||||||||| ||||||||||||||  ||| ||| |||| ||||||||||||||||||||||||||||||||| |||||    
T  5877 acaaacattactcttgtggcctttttcaccacacttgtaataaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcag 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 246
Target Start/End: Complemental strand, 5194 - 5020
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    |||||||| ||||| || |||||||   ||||||| ||||| |||||||| || |||||| |||||| | ||  |||| ||||  ||||||||||||| |    
T  5194 atgtctccacgcttacattcagctagggtgtgtcctttctgaccacacctgaaacatttcctctcatttctaccacaagcattgtttttgtggccttttt 5095  T
Q  172 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    || ||| ||| || |||| ||| |||||||||||||||||||||||||||||||| ||||| |||| ||| ||||    
T  5094 catcactcttttaacaaacaatttcagcaggagcatctctcctcttgggcctcctatcatcattcatcctctgct 5020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 237
Target Start/End: Complemental strand, 67129 - 66992
Alignment:
Q  100 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    |||||||||| || |||||||| || |||||| |||||| | ||  ||||||||| || ||||||||||| ||||||||||| || |||| |||||| |     
T  67129 tgtgtcccttttgaccacacctgaaacatttcctctcatgtctaccacaaacattgctcttgtggcctttttcaccacacttataacaaacaatctcgga 67030  T
Q  200 aggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||||||||||||||||||| ||||| ||||| ||||    
T  67029 aggagcatctctcctcttgggtctcctatcatcattca 66992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 5866 - 6024
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 180  Q
    ||||| |||||||||||| ||||||| ||||||||||| || || || ||||||| ||||  |  ||| |||||||| ||||||||||||||||||||||    
T  5866 cgcttgcaatcagctaatgtgtgtcctttctgtccacatctgaaacacttcttcttatctcaatcacacacattactcttgtggcctttctcaccacact 5965  T
Q  181 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagc 239  Q
    || |  | | | |||||  ||| |||||||||||| | |||||||||||||| ||||||    
T  5966 tgaaatagacagtctcattaggggcatctctcctcctaggcctcctctcatcattcagc 6024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 115936 - 116045
Alignment:
Q  129 ttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctct 228  Q
    |||||||||||| ||  |||||||||||| ||||||||||| ||||||||| || | |||| ||| |||| ||||||||| |||||||| ||||||||||    
T  115936 ttcttctcatctctatcacaaacattactcttgtggcctttttcaccacacatgaaacaaacaatatcagtaggagcatccctcctcttaggcctcctct 116035  T
Q  229 catctttcag 238  Q
    |||| |||||    
T  116036 catcattcag 116045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 196
Target Start/End: Original strand, 12052 - 12176
Alignment:
Q  72 atgtctccccgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 171  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  12052 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 12151  T
Q  172 caccacacttgtagcaaagaatctc 196  Q
    |||||||||||||||||| ||||||    
T  12152 caccacacttgtagcaaacaatctc 12176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 237
Target Start/End: Complemental strand, 31012 - 30897
Alignment:
Q  122 aaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggc 221  Q
    |||||| |||||||||||   | | ||| ||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||||| ||||| |      
T  31012 aaagcacttcttctcatcaccattgcaagcattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaacatctcttctcttagtt 30913  T
Q  222 ctcctctcatctttca 237  Q
    ||||||||||| ||||    
T  30912 ctcctctcatcattca 30897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 3215 - 3285
Alignment:
Q  167 tttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||||| ||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  3215 tttctccccacacttgaagcaaataatctcagtaggagcatctctcctcttgggcctcctctcatcattca 3285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 237
Target Start/End: Complemental strand, 33334 - 33256
Alignment:
Q  159 ttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||||||||| |||||||||||| | |||| ||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  33334 ttgtggcctttttcaccacacttgaaacaaacaatttcaacaggagcatctctcctcttgggcctcctctcatcattca 33256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 146 - 246
Target Start/End: Complemental strand, 16584 - 16484
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgc 245  Q
    |||| ||||||| |||||||| |||||||||||||||||||||| || ||||||||||| |||| || |  | |||||||||||||| |||| |||||||    
T  16584 acaagcattactcttgtggcccttctcaccacacttgtagcaaacaacctcagcaggagtatctttctttctaggcctcctctcatcattcaccctttgc 16485  T
Q  246 t 246  Q
    |    
T  16484 t 16484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 232
Target Start/End: Original strand, 36156 - 36243
Alignment:
Q  145 tacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||| |||||||| ||||||||||||||||||||| ||||||||| ||||| || ||| |||||||| ||||| || |||||||||||    
T  36156 tacagacattactcttgtggcctttctcaccacacctgtagcaaacaatcttagtaggggcatctcttctcttaggtctcctctcatc 36243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 1269 - 1359
Alignment:
Q  147 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||||||||| |||||||| ||||||||||||||||| |||| |||||||| |||| |||| || ||||| || ||||||||||| ||||    
T  1269 caaacattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattca 1359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 7908 - 7977
Alignment:
Q  168 ttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||||||||||||||| |||| |||||||| |||| |||| || ||||| || ||||||||||| ||||    
T  7908 ttctcaccacacttgtaacaaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattca 7977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 237
Target Start/End: Complemental strand, 3863 - 3776
Alignment:
Q  150 acattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    |||||||| ||||||||  |||| |||||||||||||||| ||||||| ||| | ||||||||||||| || ||||||||||| ||||    
T  3863 acattactcttgtggcccctctcgccacacttgtagcaaacaatctcaacagaaacatctctcctcttaggtctcctctcatcattca 3776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 208
Target Start/End: Original strand, 30225 - 30325
Alignment:
Q  108 ttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcat 207  Q
    ||||| |||||||| || || ||| |||||||| ||  |||||| || ||||||||||||||||||||||||||||| |||| ||||| || | ||||||    
T  30225 ttctgaccacacctgaatcacttcctctcatctctaccacaaacgttgcttttgtggcctttctcaccacacttgtaacaaacaatcttagaaagagcat 30324  T
Q  208 c 208  Q
    |    
T  30325 c 30325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 18174 - 18260
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||| ||||||| || |||||||||||||||||  ||||||||| ||||||||||| ||||||| || |  | ||||||||||||||    
T  18174 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagcagtagcatctttctttcttggcctcctctcatc 18260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 110882 - 110819
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatct 209  Q
    |||| ||||||| ||||||||||||||||||||  | ||||| | ||||||| |||||||||||    
T  110882 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatct 110819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 232
Target Start/End: Complemental strand, 139585 - 139499
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||||||||||| |||||||||||||||||||| ||| |||||  ||||||||| |||| ||| ||| |||| |||| ||| |||||    
T  139585 acaaacattactcttgtggcctttctcaccacaattgaagcaagtaatctcagctggagtatccctcttcttaggccgcctatcatc 139499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 179 - 250
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctctt 217  Q
    |||||||||||| |||||||||||||||||||| ||| |||||  ||||||| | |||||||| ||| ||||    
T  179 acaaacattactcttgtggcctttctcaccacaattgaagcaagtaatctcaactggagcatccctcttctt 250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1914 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 206
Target Start/End: Complemental strand, 1246 - 1145
Alignment:
Q  105 cccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggag 204  Q
    |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| ||||||||  |||| |  |||||||||| ||    
T  1246 cccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcatactatctcagcagaag 1147  T
Q  205 ca 206  Q
    ||    
T  1146 ca 1145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 238
Target Start/End: Original strand, 29855 - 29948
Alignment:
Q  145 tacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    ||||||||||||| |||||||| || |||||||||||| |  | |  ||||||  |||||||||||||||| | |||||||||||||| |||||    
T  29855 tacaaacattactcttgtggcccttttcaccacacttgaaatagactatctcaataggagcatctctcctcctaggcctcctctcatcattcag 29948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 12162 - 12214
Alignment:
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcagga 203  Q
    ||||||| |||||||| |||||||||||||||||||||| |||||||| ||||    
T  12162 cattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtagga 12214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 246
Target Start/End: Original strand, 7202 - 7302
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgc 245  Q
    |||| ||||||| || |||||||||||||||||  | ||||||| ||||||| ||||||||||| || |  | |||||||||||||| ||||  ||||||    
T  7202 acaagcattactcttatggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgc 7301  T
Q  246 t 246  Q
    |    
T  7302 t 7302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 246
Target Start/End: Original strand, 14332 - 14432
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgc 245  Q
    |||| ||||||| || |||||||||||||||||  | ||||||| ||||||| ||||||||||| || |  | |||||||||||||| ||||  ||||||    
T  14332 acaagcattactcttatggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgc 14431  T
Q  246 t 246  Q
    |    
T  14432 t 14432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 5414 - 5517
Alignment:
Q  143 agtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctt 242  Q
    ||||||| ||||||| |||||||||||| |||||||   |||||||| || |||||||| || |||| || |  | |||||||||||||| |||| ||||    
T  5414 agtacaagcattactcttgtggcctttcacaccacaagggtagcaaacaacctcagcagtagtatctttctttctaggcctcctctcatcattcaccctt 5513  T
Q  243 tgct 246  Q
    ||||    
T  5514 tgct 5517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 26678 - 26781
Alignment:
Q  143 agtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctt 242  Q
    ||||||| ||||||| ||||||||||||||||||||  | ||||||| || |||||||| || |||| || |  | |||||||||||||| ||||  |||    
T  26678 agtacaagcattactcttgtggcctttctcaccacaagtatagcaaacaacctcagcagtagtatctttctttctaggcctcctctcatcattcactctt 26777  T
Q  243 tgct 246  Q
    ||||    
T  26778 tgct 26781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2059 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 232
Target Start/End: Complemental strand, 744 - 658
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 232  Q
    |||||||||||| |||||| ||||||||||||| ||| | |||  ||||||||| |||||||| ||| |||| |||| ||| |||||    
T  744 acaaacattactcttgtggtctttctcaccacaattgaaacaagtaatctcagctggagcatccctcttcttaggccgcctatcatc 658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 2206 - 2260
Alignment:
Q  192 atctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgct 246  Q
    ||||||||||||||||||||||| ||  ||||||||||||| |||| ||||||||    
T  2206 atctcagcaggagcatctctcctattccgcctcctctcatcattcaacctttgct 2260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 17489 - 17551
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 208  Q
    |||||||||||| |||||||||||||||||||| ||| | || | |||||| |||||||||||    
T  17489 acaaacattactcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatc 17551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 171447 - 171509
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 208  Q
    |||||||||||| |||||||||||||||||||| ||||| |||  ||||||| | ||||||||    
T  171447 acaaacattactcttgtggcctttctcaccacaattgtaacaagtaatctcaactggagcatc 171509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 104561 - 104618
Alignment:
Q  152 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatct 209  Q
    |||||| ||||||||||||||||||||  | ||||||| ||||||| |||||||||||    
T  104561 attactcttgtggcctttctcaccacaagtatagcaaacaatctcaacaggagcatct 104618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 178
Target Start/End: Original strand, 1 - 97
Alignment:
Q  82 gcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccaca 178  Q
    |||| |||||||||||  | || |||||||  |||||||  || ||||||||| | || || | ||||||||| |||||||||||||||||||||||    
T  1 gcttgcaatcagctaaagtatgacccttcttgccacaccggaaacatttcttcacctcctttggacaaacattgcttttgtggcctttctcaccaca 97  T

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Target: scaffold0865 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 1243 - 1155
Alignment:
Q  150 acattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    |||||||  ||||||||||| |||||||| ||  | || | ||||| || |||||||||||||||| | |||||||||||||| |||||    
T  1243 acattacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctcctctcatcattcag 1155  T

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Target: scaffold0133 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 28256 - 28168
Alignment:
Q  150 acattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcag 238  Q
    |||||||  ||||||||||| |||||||| ||  | || | ||||| || |||||||||||||||| | |||||||||||||| |||||    
T  28256 acattacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctcctctcatcattcag 28168  T

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Target: scaffold0605 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 1589 - 1700
Alignment:
Q  126 catttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcc 225  Q
    ||||||||||||||||  || ||| ||||||| |||||||| ||  ||||||| ||||| |||| ||  ||| ||||||||| ||||| ||| |||  ||    
T  1589 catttcttctcatcttgggtgcaagcattactcttgtggcccttaacaccacatttgtaacaaacaacatcaacaggagcatttctccccttaggctgcc 1688  T
Q  226 tctcatctttca 237  Q
    ||||||| ||||    
T  1689 tctcatcattca 1700  T

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Target: scaffold0309 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 12991 - 13046
Alignment:
Q  81 cgcttccaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctc 136  Q
    ||||| |||||||||||  ||||||| ||||| |||||||||||||| ||||||||    
T  12991 cgcttacaatcagctaaagtgtgtcctttctgaccacacctaaagcacttcttctc 13046  T

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Target: scaffold0075 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 48059 - 48122
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatct 209  Q
    |||| ||||||| ||||||||||||||||||||  | ||||| | ||||||| |||||||||||    
T  48059 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatct 48122  T

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Target: scaffold0075; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 55441 - 55383
Alignment:
Q  151 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatct 209  Q
    ||||||| ||||||||||||||||||||  | ||||| | ||||||| |||||||||||    
T  55441 cattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatct 55383  T

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Target: scaffold0293 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 15739 - 15793
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagca 200  Q
    |||| ||||||| || |||||||||||||||||  ||||||||| ||||||||||    
T  15739 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagca 15793  T

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Target: scaffold0289 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 117 - 179
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 208  Q
    ||||||||| || |||||||||||||||||||| ||| | || | |||||| |||||||||||    
T  117 acaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctctgcaggagcatc 179  T

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Target: scaffold0165 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 12322 - 12368
Alignment:
Q  195 tcagcaggagcatctctcctcttgggcctcctctcatctttcagcct 241  Q
    |||| |||||||||||||||||  |||||||||||||| ||||||||    
T  12322 tcagtaggagcatctctcctctaaggcctcctctcatcattcagcct 12368  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 9329 - 9235
Alignment:
Q  143 agtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttca 237  Q
    ||||||| ||||||| |||||||| |||||||||||  | ||||||| |||||||| || || |||| || |  | |||||||||||||| ||||    
T  9329 agtacaagcattactcttgtggcccttctcaccacaagtatagcaaacaatctcagtagtagtatctttctttctaggcctcctctcatcattca 9235  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 216395 - 216341
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagca 200  Q
    |||| ||||||| || |||||||||||||||||  ||||||||| ||||||||||    
T  216395 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagca 216341  T

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Target: scaffold0413 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Original strand, 3871 - 3903
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccaca 178  Q
    |||| ||||||||||||||||||||||||||||    
T  3871 acaagcattacttttgtggcctttctcaccaca 3903  T

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Target: scaffold0357 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 17952 - 17920
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccaca 178  Q
    |||||||||||| ||||||||||||||||||||    
T  17952 acaaacattactcttgtggcctttctcaccaca 17920  T

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Target: scaffold0331 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 14957 - 14901
Alignment:
Q  143 agtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 199  Q
    ||||||| ||||||| || |||||||||||||||||  | |||||||||| ||||||    
T  14957 agtacaagcattactcttatggcctttctcaccacaagtatagcaaagaacctcagc 14901  T

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Target: scaffold0282 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 13449 - 13397
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcag 198  Q
    |||| ||||||| || |||||||||||||||||  ||||||||| ||||||||    
T  13449 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcag 13397  T

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Target: scaffold0181 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 28959 - 28871
Alignment:
Q  90 tcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccaca 178  Q
    ||||||||| |||| |||||||  |||||||  || ||||||||  | || |||| ||||||||| || |||||||||||||| |||||    
T  28959 tcagctaatgtgtgacccttcttgccacaccggaaacatttctttacctccttaggacaaacattgctcttgtggcctttctcgccaca 28871  T

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Target: scaffold0148 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 246
Target Start/End: Original strand, 2324 - 2428
Alignment:
Q  142 tagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcct 241  Q
    |||||||| | ||||| ||||| |||||||| |||||   | | |||||||||||||||||   |||| || ||||||| ||||||||||| |||| |||    
T  2324 tagtacaagcgttactcttgtgacctttctctccacataggaaacaaagaatctcagcaggtatatctttcttcttgggtctcctctcatcattcaccct 2423  T
Q  242 ttgct 246  Q
     ||||    
T  2424 ctgct 2428  T

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Target: scaffold0077 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 246
Target Start/End: Complemental strand, 57589 - 57489
Alignment:
Q  146 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatctttcagcctttgc 245  Q
    |||| ||||||| || ||||||||||| |||||  | ||| ||| ||||||| ||||||||||| || |  | |||||||||||||| ||||  ||||||    
T  57589 acaagcattactcttatggcctttctcgccacaagtatagtaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgc 57490  T
Q  246 t 246  Q
    |    
T  57489 t 57489  T

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