View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2232_low_20 (Length: 291)
Name: NF2232_low_20
Description: NF2232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2232_low_20 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 37028537 - 37028262
Alignment:
| Q |
1 |
tgagtggaaaatgacacagattatggataaccaatcaaatgaaagttaagcattgaaccatatataattttataccaagggtattaggtgcagttggtgc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37028537 |
tgagtggaaaatgacacagattatggataaccaatcaaataaaagttaagcattgaaccatatataattttataccaagggtattaggtgcagttggtgc |
37028438 |
T |
|
| Q |
101 |
caaatgcctccatcgtaatgtcctttccatgaagtcaagcttatcttttgcctctgaatacttctcaagatcatctacgttctgaccagatgtcccaaga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
37028437 |
caaatgcctccatcgtaatgtcctttccatgaagtcaagcttatcttttgcctctgaatacttctcaagatcatctacattctgaccagatgtcccaaga |
37028338 |
T |
|
| Q |
201 |
aacctggaagtaagcaatatggatcatatataacatacgaaaatacagtacattcagaagcaatgacagtaatatt |
276 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
37028337 |
aacctggaagtaagcaatatggatcatatataacatacgaaaatacagtgcattcagaagcaatgacagtaatatt |
37028262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University