View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2232_low_33 (Length: 222)
Name: NF2232_low_33
Description: NF2232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2232_low_33 |
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Alignment Details
Target: chr2 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 13 - 203
Target Start/End: Complemental strand, 39273114 - 39272910
Alignment:
| Q |
13 |
agaagaagaattctagaaattaccatgtgaagctaccaattgagtggttccggcaaaagaatgcaataatgttgtgaatgtgattgctacaacaaacaag |
112 |
Q |
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| T |
39273114 |
agaagaagaattctagaaattaccatgtgaagctaccaattgagtggttccggcaaaagaatgcaataatgttgtgaatgtgattgctacaacaaacaag |
39273015 |
T |
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| Q |
113 |
agattaactaatatgagaa-aaaatagtaaacaagtgaaaaatgaagaagaaatta-------------gatgaggaaaacaattgaacgagaagaaatc |
198 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
39273014 |
agattaactaatatgagaaaaaaatagtaaacaagtgaaaaatgaagaagaaattatgcattgcatattgatgaggaaaacaattgaacgagaagaaatc |
39272915 |
T |
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| Q |
199 |
gaagt |
203 |
Q |
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||||| |
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| T |
39272914 |
gaagt |
39272910 |
T |
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