View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2232_low_9 (Length: 409)
Name: NF2232_low_9
Description: NF2232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2232_low_9 |
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Alignment Details
Target: chr6 (Bit Score: 374; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 1 - 390
Target Start/End: Complemental strand, 16203344 - 16202955
Alignment:
| Q |
1 |
aaacactagtgaagaccaatatttgtcaccatattctagtgcaactgaggctaatcctcaacaccaatctgctacaaacttgccacatcattcaggtgca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16203344 |
aaacactagtgaagaccaatatttgtcaccatattctagtgctactgaggctaatcctcaacaccaatctgctacaaacttgccacatcattcaggtgca |
16203245 |
T |
|
| Q |
101 |
atgcaaactccgtacccgtcttctggaagccatgatcagtttagggcagggttaccaactgaacaccattctgctacaagtcatggtcaatatatgcaac |
200 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16203244 |
atgcaaactccgtacccatcttctggaagccatgatcagtttagggcagggttaccaactgaacaccattctgctacaagtcatggtcaatatatgcaac |
16203145 |
T |
|
| Q |
201 |
cacaacactctagtgcaatgaaaactcaatacccttcagctggaagccatgaacagtacaacaaaaacacaacacttggagaacaacctcatctacacta |
300 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
16203144 |
cacaacactctagtgcaatgaaaactcaaaacccttcagctggaagccatgaacagtacaacaaaaacacaacacttggagaacaaccgcatctacacta |
16203045 |
T |
|
| Q |
301 |
tgaatcaatggagaactcatcaaaccaaggcaacaacacttacacagacaaaatctactctgcaacttctgcaattgccgacacagctgc |
390 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16203044 |
tgaatcaatggagaactcatcaaaccaaggcaacaacacttacacagacaaaatctactctgcaacttctgcaattgccgacacagctgc |
16202955 |
T |
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