View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2233_high_4 (Length: 222)
Name: NF2233_high_4
Description: NF2233
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2233_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 20222337 - 20222145
Alignment:
| Q |
13 |
ataattcttatataaaaaactattattatgtggtcaaactccactccaatttgctctaatggtactctattatatggtagaacaaagtacaacccaatgc |
112 |
Q |
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| T |
20222337 |
ataattcttatataaaaaactattattatgtggtcaaactccacttcaatttgctctaatggtactctattatatggtagaacaaagtacaacccaatgc |
20222238 |
T |
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| Q |
113 |
tatgaatctttataaaaagtaaaacaatgtcggagttacaataaacatgtgtttagaagttgagcaaattgtggtcaaaacacatgacatatc |
205 |
Q |
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| T |
20222237 |
tatgaatctttacaaaaagtaaaacaatgtcggagttacaataaacatgtgtttagaagttgagcaaattgtggcgaaaacacatgacatatc |
20222145 |
T |
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