View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2235_high_16 (Length: 238)
Name: NF2235_high_16
Description: NF2235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2235_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 37336435 - 37336214
Alignment:
| Q |
1 |
aattaaaatatatccatgcctataaaagtttggagataaataagtatcataatttaaatataaatgatgtttcacaaaataacccatccctcctctttgt |
100 |
Q |
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| T |
37336435 |
aattaaaatatatccatgcctataaaagtttggagataaataagtatcataatttaaatataaatgatatttcacaaaataacccatccctcctctttgt |
37336336 |
T |
|
| Q |
101 |
ggagctctgtttgtatatatgcaaatcggattaagttaatttcaacaaattctctataatagtttatgtaaaaaatagtttgaccatattatctctttga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
37336335 |
ggagctctgtttgtatatatgcaaatcggattaagttaatttcaacaaattctctatgatagtttatgtaaaaaatagtttgaccatattatctctttga |
37336236 |
T |
|
| Q |
201 |
atatagaaataaccgagcacgg |
222 |
Q |
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|||||||||||||||| ||||| |
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| T |
37336235 |
atatagaaataaccgaacacgg |
37336214 |
T |
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