View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2237_low_13 (Length: 208)
Name: NF2237_low_13
Description: NF2237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2237_low_13 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 36622737 - 36622559
Alignment:
| Q |
15 |
agaagaataatattacaaatcaccaagagaaacaagtaaagagtgtcatgcactggaccactagattgtagatcctctggtacatacataatatacattt |
114 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
36622737 |
agaagaataatattacaattcaccaagagaaacaagtaaagagtgtcatgcactggaccactagattgtagatcctctgatacatacataatatacattt |
36622638 |
T |
|
| Q |
115 |
gaaggaccacataactaatatatccattccactgtttgagctgaaaattgcacatcgataatgttcattatttttaatt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36622637 |
gaaggaccacataactaatatatccattccactgtttgagctgaaaattgcacatcgataatgttcattatttttaatt |
36622559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University