View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2239_low_12 (Length: 247)
Name: NF2239_low_12
Description: NF2239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2239_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 42982110 - 42982336
Alignment:
| Q |
1 |
aaggattagcaattcaattggaattgtagctacacgctgaatgatgaaacaaatctaggtcaccacgtgattgagctttgattggtgcaaaagctaaact |
100 |
Q |
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| T |
42982110 |
aaggattggcaattcaattggaattgtagctacacgctgaatgatgaaacaaatctaggccaccacgtgattgagctttgattggtgcaaaagctaaact |
42982209 |
T |
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| Q |
101 |
cacacaaatggatcaacctaataattaacctcatgataactttaactagggattaagaattgaacgcataaaatatgcgaatgaaaacagtggcgttgct |
200 |
Q |
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| T |
42982210 |
cacacaaatggatcaacctaataattaacctcatgataactttaactagggattaagaattgaacgcataaaatatgcgaatgaaaacagtggcgttgct |
42982309 |
T |
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| Q |
201 |
cattctctcggtattttgttatcaaatc |
228 |
Q |
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||||||||||||| |||||||||||||| |
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| T |
42982310 |
cattctctcggta-tttgttatcaaatc |
42982336 |
T |
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