View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2241_high_16 (Length: 241)

Name: NF2241_high_16
Description: NF2241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2241_high_16
NF2241_high_16
[»] chr2 (31 HSPs)
chr2 (1-202)||(30929035-30929238)
chr2 (129-202)||(7537108-7537180)
chr2 (129-174)||(1238160-1238205)
chr2 (129-174)||(13922650-13922695)
chr2 (129-202)||(20565065-20565138)
chr2 (130-195)||(28202296-28202361)
chr2 (129-202)||(31815877-31815950)
chr2 (132-201)||(32986013-32986082)
chr2 (129-174)||(34364513-34364558)
chr2 (125-173)||(11265143-11265191)
chr2 (130-170)||(17842734-17842774)
chr2 (129-164)||(34469900-34469935)
chr2 (124-202)||(17142823-17142901)
chr2 (129-179)||(27244655-27244705)
chr2 (129-199)||(40896502-40896572)
chr2 (129-191)||(40967372-40967434)
chr2 (137-170)||(3904208-3904241)
chr2 (131-168)||(9718394-9718431)
chr2 (136-201)||(11790325-11790390)
chr2 (131-180)||(16204829-16204878)
chr2 (129-202)||(27412826-27412899)
chr2 (129-202)||(29896284-29896357)
chr2 (129-194)||(40546314-40546379)
chr2 (129-202)||(41939098-41939171)
chr2 (134-202)||(9547399-9547467)
chr2 (130-170)||(15407543-15407583)
chr2 (134-170)||(19159944-19159980)
chr2 (134-170)||(25395464-25395500)
chr2 (146-202)||(34367984-34368039)
chr2 (130-170)||(35727436-35727476)
chr2 (134-170)||(40895858-40895894)
[»] chr8 (25 HSPs)
chr8 (129-202)||(30071506-30071579)
chr8 (129-201)||(11708984-11709056)
chr8 (132-202)||(13284255-13284325)
chr8 (129-191)||(33445568-33445630)
chr8 (129-170)||(2181126-2181167)
chr8 (133-174)||(11104766-11104807)
chr8 (129-202)||(29376899-29376972)
chr8 (128-192)||(13272522-13272586)
chr8 (147-202)||(12938917-12938972)
chr8 (129-171)||(18148823-18148865)
chr8 (129-202)||(6314313-6314386)
chr8 (129-174)||(8837918-8837963)
chr8 (129-174)||(10732793-10732838)
chr8 (129-162)||(12251587-12251620)
chr8 (129-170)||(12886055-12886096)
chr8 (129-190)||(27191756-27191817)
chr8 (129-170)||(29716722-29716763)
chr8 (129-170)||(29924939-29924980)
chr8 (129-162)||(39443588-39443621)
chr8 (144-201)||(41430763-41430820)
chr8 (129-177)||(6471509-6471557)
chr8 (130-170)||(15079174-15079214)
chr8 (129-201)||(27718885-27718957)
chr8 (130-170)||(42367728-42367768)
chr8 (134-174)||(44037383-44037423)
[»] chr5 (33 HSPs)
chr5 (125-170)||(16067645-16067690)
chr5 (130-174)||(14869991-14870035)
chr5 (129-180)||(13796328-13796379)
chr5 (129-180)||(27721687-27721738)
chr5 (128-194)||(28887107-28887174)
chr5 (129-191)||(32793041-32793104)
chr5 (144-198)||(13409563-13409617)
chr5 (128-174)||(14124298-14124344)
chr5 (129-171)||(22585650-22585692)
chr5 (129-179)||(36623187-36623237)
chr5 (129-191)||(39610342-39610404)
chr5 (129-171)||(40730216-40730258)
chr5 (129-175)||(42663221-42663267)
chr5 (129-178)||(5485184-5485233)
chr5 (129-202)||(6489005-6489078)
chr5 (129-170)||(8545011-8545052)
chr5 (129-162)||(9699926-9699959)
chr5 (129-202)||(13864342-13864415)
chr5 (129-202)||(15889409-15889482)
chr5 (129-202)||(16701571-16701644)
chr5 (129-170)||(18589889-18589930)
chr5 (129-170)||(23118073-23118114)
chr5 (129-170)||(26034630-26034671)
chr5 (129-174)||(30488923-30488968)
chr5 (129-170)||(33654746-33654787)
chr5 (129-198)||(43359067-43359136)
chr5 (136-180)||(3416573-3416617)
chr5 (129-201)||(5107236-5107308)
chr5 (155-199)||(7149876-7149920)
chr5 (129-165)||(7336342-7336378)
chr5 (128-192)||(7713529-7713593)
chr5 (130-186)||(18278265-18278321)
chr5 (129-181)||(40445981-40446033)
[»] chr4 (29 HSPs)
chr4 (129-193)||(13121542-13121606)
chr4 (130-202)||(38374956-38375028)
chr4 (128-202)||(20960681-20960755)
chr4 (129-198)||(40070962-40071031)
chr4 (132-191)||(20403169-20403228)
chr4 (130-180)||(18635529-18635579)
chr4 (131-177)||(29737673-29737719)
chr4 (129-170)||(24837495-24837536)
chr4 (129-202)||(43034332-43034405)
chr4 (130-170)||(13984664-13984704)
chr4 (129-201)||(22164260-22164332)
chr4 (134-202)||(37930837-37930905)
chr4 (119-202)||(21317328-21317411)
chr4 (129-171)||(874457-874499)
chr4 (132-170)||(9196214-9196252)
chr4 (129-170)||(6459946-6459987)
chr4 (129-174)||(11949681-11949726)
chr4 (137-174)||(18541507-18541544)
chr4 (133-202)||(21318243-21318312)
chr4 (129-170)||(23171009-23171050)
chr4 (129-202)||(24079830-24079902)
chr4 (129-162)||(26871716-26871749)
chr4 (129-170)||(32923252-32923293)
chr4 (129-170)||(45970729-45970770)
chr4 (129-170)||(51436628-51436669)
chr4 (129-201)||(9913897-9913969)
chr4 (130-194)||(17216127-17216191)
chr4 (129-201)||(22630351-22630423)
chr4 (130-174)||(41346755-41346799)
[»] chr7 (30 HSPs)
chr7 (129-195)||(24614693-24614759)
chr7 (129-191)||(5458072-5458134)
chr7 (128-170)||(21751648-21751690)
chr7 (129-170)||(1285091-1285132)
chr7 (129-170)||(2622323-2622364)
chr7 (133-202)||(3584206-3584275)
chr7 (153-202)||(47663373-47663422)
chr7 (146-202)||(12167422-12167478)
chr7 (132-191)||(21928119-21928178)
chr7 (131-170)||(43539126-43539165)
chr7 (129-171)||(964762-964804)
chr7 (132-170)||(15015242-15015280)
chr7 (131-173)||(31037662-31037704)
chr7 (132-202)||(36341055-36341125)
chr7 (153-202)||(3671846-3671895)
chr7 (129-202)||(21554924-21554997)
chr7 (129-170)||(28200407-28200448)
chr7 (129-202)||(30857246-30857319)
chr7 (129-202)||(35142139-35142212)
chr7 (129-162)||(38435956-38435989)
chr7 (129-170)||(42829256-42829297)
chr7 (129-162)||(42995274-42995307)
chr7 (130-174)||(7262691-7262735)
chr7 (129-193)||(19036101-19036164)
chr7 (129-193)||(20718472-20718535)
chr7 (129-169)||(23863723-23863763)
chr7 (130-170)||(28323561-28323601)
chr7 (129-177)||(39926553-39926601)
chr7 (129-169)||(41624693-41624733)
chr7 (129-181)||(48980485-48980537)
[»] chr1 (49 HSPs)
chr1 (131-193)||(46334775-46334837)
chr1 (129-190)||(41032929-41032990)
chr1 (129-180)||(26086927-26086978)
chr1 (131-202)||(28832161-28832232)
chr1 (129-180)||(44220985-44221036)
chr1 (129-199)||(7550894-7550964)
chr1 (131-193)||(10841900-10841962)
chr1 (132-202)||(13234079-13234149)
chr1 (128-170)||(29701342-29701384)
chr1 (153-202)||(3157707-3157756)
chr1 (129-170)||(3573346-3573387)
chr1 (137-202)||(22388165-22388230)
chr1 (129-174)||(27853353-27853398)
chr1 (129-202)||(30521865-30521938)
chr1 (129-202)||(48530791-48530863)
chr1 (129-201)||(3431328-3431400)
chr1 (130-170)||(10292935-10292975)
chr1 (129-201)||(16475904-16475976)
chr1 (129-180)||(16033462-16033513)
chr1 (131-202)||(30799254-30799325)
chr1 (128-179)||(32497494-32497545)
chr1 (131-170)||(33229704-33229743)
chr1 (128-170)||(2889948-2889990)
chr1 (131-181)||(4770639-4770689)
chr1 (131-201)||(12522110-12522180)
chr1 (128-170)||(16967216-16967258)
chr1 (129-174)||(18091201-18091247)
chr1 (129-171)||(37493363-37493405)
chr1 (134-180)||(39949815-39949861)
chr1 (129-174)||(2884466-2884511)
chr1 (131-180)||(12213993-12214042)
chr1 (128-181)||(14880825-14880878)
chr1 (129-202)||(17139507-17139580)
chr1 (129-170)||(30678835-30678876)
chr1 (129-174)||(31385153-31385198)
chr1 (129-202)||(33020033-33020106)
chr1 (125-170)||(35442849-35442894)
chr1 (129-174)||(41998349-41998394)
chr1 (129-202)||(42045362-42045435)
chr1 (129-202)||(44243871-44243944)
chr1 (129-170)||(49222814-49222855)
chr1 (133-202)||(50372351-50372420)
chr1 (129-201)||(5279361-5279433)
chr1 (130-170)||(5291110-5291150)
chr1 (122-170)||(10356205-10356253)
chr1 (129-165)||(28568862-28568898)
chr1 (129-177)||(30279635-30279683)
chr1 (130-202)||(32950751-32950823)
chr1 (137-181)||(41019708-41019752)
[»] chr6 (19 HSPs)
chr6 (129-198)||(13496114-13496183)
chr6 (127-178)||(404159-404210)
chr6 (129-174)||(2445297-2445342)
chr6 (129-165)||(18313931-18313967)
chr6 (129-169)||(19277572-19277612)
chr6 (129-193)||(29069481-29069545)
chr6 (129-180)||(12412275-12412326)
chr6 (128-179)||(12412769-12412820)
chr6 (136-202)||(10278458-10278524)
chr6 (129-174)||(14350947-14350992)
chr6 (129-174)||(14552335-14552380)
chr6 (129-170)||(16125048-16125089)
chr6 (129-166)||(20480657-20480694)
chr6 (134-202)||(27080794-27080863)
chr6 (129-198)||(28758794-28758863)
chr6 (129-170)||(28951397-28951438)
chr6 (130-202)||(3808108-3808180)
chr6 (130-170)||(12904339-12904379)
chr6 (129-201)||(32524411-32524483)
[»] chr3 (34 HSPs)
chr3 (129-174)||(48517669-48517714)
chr3 (131-179)||(38573586-38573634)
chr3 (128-196)||(43334508-43334576)
chr3 (129-180)||(1757681-1757732)
chr3 (129-191)||(21594702-21594763)
chr3 (131-181)||(24088312-24088362)
chr3 (132-174)||(39100434-39100476)
chr3 (132-170)||(52543714-52543752)
chr3 (129-170)||(23332648-23332689)
chr3 (129-174)||(32753826-32753871)
chr3 (129-174)||(41168156-41168201)
chr3 (128-180)||(8942014-8942066)
chr3 (129-180)||(3176985-3177036)
chr3 (129-180)||(11574251-11574302)
chr3 (131-170)||(54020671-54020710)
chr3 (128-170)||(5941316-5941358)
chr3 (130-180)||(12976614-12976664)
chr3 (132-170)||(20222970-20223008)
chr3 (131-165)||(36918899-36918933)
chr3 (137-171)||(54044015-54044049)
chr3 (129-170)||(7464513-7464554)
chr3 (130-171)||(7651185-7651226)
chr3 (125-170)||(10922330-10922375)
chr3 (129-170)||(18737106-18737147)
chr3 (129-202)||(26859106-26859179)
chr3 (129-202)||(32928578-32928650)
chr3 (129-174)||(47377367-47377412)
chr3 (129-202)||(48924309-48924382)
chr3 (129-202)||(51250223-51250296)
chr3 (129-170)||(52453279-52453320)
chr3 (125-169)||(9778827-9778871)
chr3 (130-170)||(22462311-22462351)
chr3 (130-170)||(22486682-22486722)
chr3 (142-174)||(38221739-38221771)
[»] scaffold0445 (1 HSPs)
scaffold0445 (130-170)||(4469-4509)
[»] scaffold0334 (1 HSPs)
scaffold0334 (155-202)||(5206-5253)
[»] scaffold0016 (1 HSPs)
scaffold0016 (129-180)||(99035-99086)
[»] scaffold0122 (1 HSPs)
scaffold0122 (124-202)||(14176-14254)
[»] scaffold0095 (1 HSPs)
scaffold0095 (129-162)||(155-188)
[»] scaffold0050 (1 HSPs)
scaffold0050 (129-202)||(53370-53443)
[»] scaffold0008 (1 HSPs)
scaffold0008 (129-178)||(119567-119616)
[»] scaffold0160 (1 HSPs)
scaffold0160 (129-193)||(22909-22973)


Alignment Details
Target: chr2 (Bit Score: 118; Significance: 2e-60; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 30929238 - 30929035
Alignment:
Q  1 ttatcgattatttttagcaatatccaattgtttcagattttgtgaaacagaaaagaaattgttaaacaaaacaaattgcaa--nnnnnnnnnactataac 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||    
T  30929238 ttatcgattatttttagcaatatccaattgtttcagattttgtgaaacagaaaagaaattgttaaacaaaacaaattgcaatttttttttgtactataac 30929139  T
Q  99 cgttttgttcaaaaagtttattatcggttttcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaacca 198  Q
    |||||||||||||||||||||||||||| ||||| || |||||| |||||||| | ||||||||||||||||| ||  ||| |||||||||||| | |||    
T  30929138 cgttttgttcaaaaagtttattatcggtcttcgtaagtttaactcagttgatatggacaatgcataatatatataagatctaaaattcaaaccctagcca 30929039  T
Q  199 ccac 202  Q
    ||||    
T  30929038 ccac 30929035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 7537108 - 7537180
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||| |||||| ||||||||||||||||||||||||||| ||| ||| | | ||| |||||||||||||||    
T  7537108 tcgtgagattaactcagttgataggaacaatgcataatatatgcaaggtccggagttc-aaccccaaccaccac 7537180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 1238160 - 1238205
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    |||||||||||||| | |||||||| ||||||||||||||||||||    
T  1238160 tcgtgagcttaactcaattgatagggacaatgcataatatatacaa 1238205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 13922695 - 13922650
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    |||||||||||||| ||||| |||| ||||||||||||||||||||    
T  13922695 tcgtgagcttaactcagttggtagggacaatgcataatatatacaa 13922650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 20565138 - 20565065
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||||| || ||||| |||| |||||||||||||||| ||| ||| |   |||||||||||||||||||    
T  20565138 tcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccccaaccaccac 20565065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 28202296 - 28202361
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaa 195  Q
    |||||||||| || |||||||||| ||||||||||||||||  || ||| ||| ||||||||||||    
T  28202296 cgtgagcttagctcagttgatagggacaatgcataatatatgtaaggtccgaagttcaaaccccaa 28202361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 31815950 - 31815877
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||||||||||||| ||||| |||| |||||||||||||||| ||| ||| |   |||||||||| ||||||||    
T  31815950 tcgtgagcttaactcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccccgaccaccac 31815877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 32986013 - 32986082
Alignment:
Q  132 tgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccacca 201  Q
    |||| |||||| |||||||| ||| |||| |||||||||||||  || | ||||||||||||||||||||    
T  32986013 tgagtttaactcagttgatatgaaaaatgaataatatatacaagatccggaattcaaaccccaaccacca 32986082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 34364558 - 34364513
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    ||||||| |||||||||||| |||||| ||||||||||||||||||    
T  34364558 tcgtgagtttaacttagttggtaggaataatgcataatatatacaa 34364513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 11265191 - 11265143
Alignment:
Q  125 gttttcgtgagcttaacttagttgataggaacaatgcataatatataca 173  Q
    ||||| || |||||||||||||||||||| || ||||||||||||||||    
T  11265191 gtttttgtaagcttaacttagttgatagggacgatgcataatatataca 11265143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 17842774 - 17842734
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  17842774 cgtgaacttaacttagttgataagaacaatgcataatatat 17842734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 164
Target Start/End: Complemental strand, 34469935 - 34469900
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcata 164  Q
    ||||||||||||||||||||||| ||||||||||||    
T  34469935 tcgtgagcttaacttagttgataagaacaatgcata 34469900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 202
Target Start/End: Original strand, 17142823 - 17142901
Alignment:
Q  124 ggttttcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||| ||||||||||| || ||||| |||  |||||| ||||||||| ||| ||||| | |||||||||| ||||||||    
T  17142823 ggttctcgtgagcttagctcagttggtagtgacaatgtataatatatgcaaagtctggagttcaaaccccgaccaccac 17142901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 27244655 - 27244705
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtct 179  Q
    ||||||||||| || |||||||||| |||||||||||||||| ||| ||||    
T  27244655 tcgtgagcttagctcagttgatagggacaatgcataatatatgcaaggtct 27244705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 199
Target Start/End: Complemental strand, 40896572 - 40896502
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccac 199  Q
    ||||||||||| || ||||| ||   |||||||||||||||||||| ||||||| ||| |||||| |||||    
T  40896572 tcgtgagcttagctcagttggtatagacaatgcataatatatacaaagtctgaagttcgaaccccgaccac 40896502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 40967434 - 40967372
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaacc 191  Q
    |||||||||||||| |||||||| | |||||||||||||||| ||| || |||  ||||||||    
T  40967434 tcgtgagcttaactcagttgataaggacaatgcataatatatgcaaggtttgaggttcaaacc 40967372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 170
Target Start/End: Original strand, 3904208 - 3904241
Alignment:
Q  137 ttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||||||||| ||||||||||||||||    
T  3904208 ttaacttagttgatagggacaatgcataatatat 3904241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 9718394 - 9718431
Alignment:
Q  131 gtgagcttaacttagttgataggaacaatgcataatat 168  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  9718394 gtgagcttaactcagttgataagaacaatgcataatat 9718431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 11790390 - 11790325
Alignment:
Q  136 cttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccacca 201  Q
    ||||||| ||||| ||||||||||| ||||||||||||| || |||  |||||| ||| |||||||    
T  11790390 cttaactcagttgctaggaacaatggataatatatacaaggtatgaggttcaaatcccgaccacca 11790325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 16204878 - 16204829
Alignment:
Q  131 gtgagcttaacttagttgataggaacaatgcataatatatacaatgtctg 180  Q
    |||||||||||| |||||||| | |||||||||||||||| ||| |||||    
T  16204878 gtgagcttaactcagttgataaggacaatgcataatatatgcaaggtctg 16204829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 27412899 - 27412826
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||||||||||||| ||||| |||  ||||||||||||||||  || |||||   |||||||||| ||||||||    
T  27412899 tcgtgagcttaactcagttggtagagacaatgcataatatatgtaaggtctgttgttcaaaccccgaccaccac 27412826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 29896357 - 29896284
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||| |||| | ||||||||| ||||||||||||||||| ||| || ||   |||||||||| ||||||||    
T  29896357 tcgtgagtttaattcagttgatagaaacaatgcataatatatgcaaggtttggggttcaaaccccgaccaccac 29896284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 40546314 - 40546379
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaacccca 194  Q
    ||||||||||| || |||| ||| |||||||||||||||||| ||||||  ||  |||||||||||    
T  40546314 tcgtgagcttagctcagttaataagaacaatgcataatatatgcaatgttcgatgttcaaacccca 40546379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 41939171 - 41939098
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||||| |||||||| |||| | ||||||||||||||  || || ||| |||||||| || ||||||||    
T  41939171 tcgtgagcttagcttagttggtagggataatgcataatatatgtaaggtttgagattcaaactccgaccaccac 41939098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 9547467 - 9547399
Alignment:
Q  134 agcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||| |||||||| | |||||||||||||||| ||| || ||   |||||||||| ||||||||    
T  9547467 agcttaactcagttgatatggacaatgcataatatatgcaaggtttggggttcaaaccccgaccaccac 9547399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 15407583 - 15407543
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||| ||||| || |||||||||||||||||||||    
T  15407583 cgtgagcttagcttagctggtaggaacaatgcataatatat 15407543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 19159944 - 19159980
Alignment:
Q  134 agcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  19159944 agcttaactcagttgatatgaacaatgcataatatat 19159980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 25395500 - 25395464
Alignment:
Q  134 agcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  25395500 agcttaactcagttggtaggaacaatgcataatatat 25395464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 34367984 - 34368039
Alignment:
Q  146 ttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||||| ||||||||||||||||||||||  |||| | |||||||||| ||||||||    
T  34367984 ttgatatgaacaatgcataatatatacaagatctg-agttcaaaccccgaccaccac 34368039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 35727436 - 35727476
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||||| ||||| || ||||||||||||||||||    
T  35727436 cgtgagcttaactcagttggtaagaacaatgcataatatat 35727476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 40895858 - 40895894
Alignment:
Q  134 agcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  40895858 agcttaacttagttggtagaaacaatgcataatatat 40895894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 30071579 - 30071506
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||||| |||||||||||||||| |||||||||||||||||||||| || |||  ||| |||||| ||||||||    
T  30071579 tcgtgaacttaacttagttgataagaacaatgcataatatatacaaggtttgaggttctaaccccgaccaccac 30071506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 11708984 - 11709056
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccacca 201  Q
    ||||||||||| || ||||| |||| |||||||||||||||| ||| ||| ||| |||||||||| |||||||    
T  11708984 tcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccgaagttcaaaccccgaccacca 11709056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 13284325 - 13284255
Alignment:
Q  132 tgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||| |||||| |||||||| |||||||| |||||||||| || || |||  |||||||||||||||||||    
T  13284325 tgagtttaactcagttgatatgaacaatgtataatatatataaggtttgaggttcaaaccccaaccaccac 13284255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 33445568 - 33445630
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaacc 191  Q
    ||||||||||| || ||||| ||||||||||||||||||||||||| || ||| |||| ||||    
T  33445568 tcgtgagcttagctcagttggtaggaacaatgcataatatatacaaggtttgagattcgaacc 33445630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 2181126 - 2181167
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||||| ||| |||||||||||||||||||||    
T  2181126 tcgtgagcttaacttaattggtaggaacaatgcataatatat 2181167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 11104766 - 11104807
Alignment:
Q  133 gagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    |||||||||| ||||| |||||||||||||||||||||||||    
T  11104766 gagcttaactcagttggtaggaacaatgcataatatatacaa 11104807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 29376899 - 29376972
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||||||||||||| ||||| || | ||||||| |||||||| ||| ||||| | |||||||||| ||||||||    
T  29376899 tcgtgagcttaactcagttggtatggacaatgcgtaatatatgcaaggtctggagttcaaaccccgaccaccac 29376972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 13272586 - 13272522
Alignment:
Q  128 ttcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccc 192  Q
    ||||||| ||||||| |||||||| | ||||||||||||||||  ||||||||| ||| ||||||    
T  13272586 ttcgtgaacttaactcagttgatatggacaatgcataatatatgtaatgtctgagatttaaaccc 13272522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 12938972 - 12938917
Alignment:
Q  147 tgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||| |||||||||||||||||||| ||  |||||| ||||||| ||||||||    
T  12938972 tgatagggacaatgcataatatatacaaggttcgaaatttaaaccccgaccaccac 12938917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 18148865 - 18148823
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatata 171  Q
    |||||||||||||| |||| ||| |||||||||||||||||||    
T  18148865 tcgtgagcttaactcagttaatatgaacaatgcataatatata 18148823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 6314386 - 6314313
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||||| || |||||||| | ||||||||||| |||| ||| ||| ||||||| ||||||  |||||||    
T  6314386 tcgtgagcttagctcagttgataaggacaatgcataaaatatgcaaggtccgaaattcgaaccccggccaccac 6314313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 8837918 - 8837963
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    |||||| |||||||  ||||||||| ||||||||||||||||||||    
T  8837918 tcgtgaacttaactcggttgatagggacaatgcataatatatacaa 8837963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 10732838 - 10732793
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    |||||||||||||| | ||| || ||||||||||||||||||||||    
T  10732838 tcgtgagcttaactcaattggtatgaacaatgcataatatatacaa 10732793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 12251620 - 12251587
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgca 162  Q
    |||||||||||||| |||||||||||||||||||    
T  12251620 tcgtgagcttaactcagttgataggaacaatgca 12251587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 12886055 - 12886096
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||| ||||  |||||||||||||||||||||    
T  12886055 tcgtgagcttaactcagttactaggaacaatgcataatatat 12886096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 27191756 - 27191817
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaac 190  Q
    ||||||||||| || ||||| || ||||||| |||||||||| ||| ||||||| |||||||    
T  27191756 tcgtgagcttagctcagttggtaagaacaattcataatatatgcaaggtctgaagttcaaac 27191817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 29716763 - 29716722
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||| ||||| |||||||||| ||||||||||    
T  29716763 tcgtgagcttaactcagttggtaggaacaattcataatatat 29716722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 29924980 - 29924939
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||| ||||||||||||| || ||||||||||||||||||    
T  29924980 tcgtgaacttaacttagttgttaagaacaatgcataatatat 29924939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 39443588 - 39443621
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgca 162  Q
    |||||||||||||| |||||||||||||||||||    
T  39443588 tcgtgagcttaactcagttgataggaacaatgca 39443621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 41430820 - 41430763
Alignment:
Q  144 agttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccacca 201  Q
    |||||||| |||||||| |||||||||||||| |||||  ||| |||||||| |||||    
T  41430820 agttgataagaacaatgtataatatatacaatatctgaggttcgaaccccaaacacca 41430763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 6471509 - 6471557
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgt 177  Q
    ||||||| |||||| ||  ||||||||||||||||||||||| ||||||    
T  6471509 tcgtgagtttaactcagccgataggaacaatgcataatatatgcaatgt 6471557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 15079214 - 15079174
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||||| ||||| |||| ||||||||||||||||    
T  15079214 cgtgagcttaactcagttggtagggacaatgcataatatat 15079174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 27718957 - 27718885
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccacca 201  Q
    ||||||||||| || |||||||| | |||||||||||||||| ||| ||| | | ||||||| || |||||||    
T  27718957 tcgtgagcttagctcagttgatatggacaatgcataatatatgcaaggtccggagttcaaactccgaccacca 27718885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 42367728 - 42367768
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||| || |||||||| ||||||||||||||||||    
T  42367728 cgtgagcttagctcagttgataagaacaatgcataatatat 42367768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 44037423 - 44037383
Alignment:
Q  134 agcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    ||||||||| ||||| || ||||||||||||||||||||||    
T  44037423 agcttaactcagttggtatgaacaatgcataatatatacaa 44037383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 16067645 - 16067690
Alignment:
Q  125 gttttcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  16067645 gttttcgtgagcttatcttagttgataggaacaatgcataatatat 16067690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 14869991 - 14870035
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||||    
T  14869991 cgtgagcttaactcagttgctagggacaatgcataatatatacaa 14870035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 13796328 - 13796379
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctg 180  Q
    |||||||||||||| ||| |||| |||||||||||||||||| ||| |||||    
T  13796328 tcgtgagcttaactcagtcgatatgaacaatgcataatatatgcaaggtctg 13796379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 27721738 - 27721687
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctg 180  Q
    ||||||||||| || ||||| ||||||||||||||||||||| ||| |||||    
T  27721738 tcgtgagcttagctcagttggtaggaacaatgcataatatatgcaaagtctg 27721687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 194
Target Start/End: Original strand, 28887107 - 28887174
Alignment:
Q  128 ttcgtgagcttaacttagttgataggaacaatgc-ataatatatacaatgtctgaaattcaaacccca 194  Q
    |||||||| |||||| |||||||||||||||||| | ||||||| ||||||| | ||||| |||||||    
T  28887107 ttcgtgagtttaactcagttgataggaacaatgcaaaaatatatgcaatgtccggaattcgaacccca 28887174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 32793104 - 32793041
Alignment:
Q  129 tcgtgagcttaacttagttgataggaac-aatgcataatatatacaatgtctgaaattcaaacc 191  Q
    ||||||||||||||||||||||| |||| ||||||||||||||  || ||||| | ||||||||    
T  32793104 tcgtgagcttaacttagttgataagaacaaatgcataatatatctaaggtctggagttcaaacc 32793041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 13409563 - 13409617
Alignment:
Q  144 agttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaacca 198  Q
    |||||||| |||||||||||||||||||||| ||| | | |||||||||| ||||    
T  13409563 agttgataagaacaatgcataatatatacaaggtccggagttcaaaccccgacca 13409617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 14124298 - 14124344
Alignment:
Q  128 ttcgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    ||||||| ||||||||||||| || | ||||||||||||||||||||    
T  14124298 ttcgtgaacttaacttagttggtaaggacaatgcataatatatacaa 14124344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 22585650 - 22585692
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatata 171  Q
    ||||| |||||||| |||||||| |||||||||||||||||||    
T  22585650 tcgtgggcttaactcagttgatatgaacaatgcataatatata 22585692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 36623237 - 36623187
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtct 179  Q
    |||||||||||||| |||||||| ||| |||||||||||||| ||| ||||    
T  36623237 tcgtgagcttaactcagttgataagaataatgcataatatatgcaaggtct 36623187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 39610404 - 39610342
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaacc 191  Q
    ||||||||||| || |||||||| | |||||||||||||||| |||||| || | ||||||||    
T  39610404 tcgtgagcttagctcagttgatatggacaatgcataatatatgcaatgtttggagttcaaacc 39610342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 40730258 - 40730216
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatata 171  Q
    ||||||||||| || |||||||| |||||||||||||||||||    
T  40730258 tcgtgagcttagctaagttgatatgaacaatgcataatatata 40730216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 42663267 - 42663221
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaat 175  Q
    ||||||| |||||| ||||| |||||||||| |||||||||||||||    
T  42663267 tcgtgagtttaactcagttgttaggaacaatacataatatatacaat 42663221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 178
Target Start/End: Original strand, 5485184 - 5485233
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtc 178  Q
    ||||||||||| || ||||| |||| |||||||||||||||| |||||||    
T  5485184 tcgtgagcttagctcagttggtagggacaatgcataatatatgcaatgtc 5485233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 6489005 - 6489078
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||||| || ||||| |||| |||||||||||||||| ||| |||||   ||||||||||  |||||||    
T  6489005 tcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaaccccggccaccac 6489078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 8545052 - 8545011
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||| |||||||| | ||||||||||||||||    
T  8545052 tcgtgagcttaactcagttgataaggacaatgcataatatat 8545011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 9699926 - 9699959
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgca 162  Q
    |||||||||||||| |||||||||||||||||||    
T  9699926 tcgtgagcttaactcagttgataggaacaatgca 9699959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 13864342 - 13864415
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||||||||||||| ||||| || ||||||| |||||||||| ||| ||| |   |||||||||| ||||||||    
T  13864342 tcgtgagcttaactcagttggtatgaacaatacataatatatgcaaggtccggggttcaaaccccgaccaccac 13864415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 15889409 - 15889482
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||||| || ||||| |||| |||||||||||||||| ||| ||||    |||||||||| ||||||||    
T  15889409 tcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctagggttcaaaccccgaccaccac 15889482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 16701644 - 16701571
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||||| || ||||| |||| |||||| ||||||||| ||| ||| |  ||||||||||| ||||||||    
T  16701644 tcgtgagcttagctcagttggtagggacaatgaataatatatgcaaggtccgggattcaaaccccgaccaccac 16701571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 18589930 - 18589889
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||| ||||| || ||||||||||||||||||    
T  18589930 tcgtgagcttaactcagttggtatgaacaatgcataatatat 18589889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 23118114 - 23118073
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||| |||||||| | ||||||||||||||||    
T  23118114 tcgtgagcttaactcagttgataaggacaatgcataatatat 23118073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 26034671 - 26034630
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||| ||||| || ||||||||||||||||||    
T  26034671 tcgtgagcttaactcagttggtatgaacaatgcataatatat 26034630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 30488923 - 30488968
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    |||||||||||  | |||||||| ||||||||||||||||||||||    
T  30488923 tcgtgagcttagttcagttgatatgaacaatgcataatatatacaa 30488968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 33654746 - 33654787
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||| ||||| |||| ||||||||||||||||    
T  33654746 tcgtgagcttaactcagttggtagggacaatgcataatatat 33654787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 43359136 - 43359067
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaacca 198  Q
    |||||| ||||  ||||||| ||| ||||||| |||||||||||||  || ||||||||||| |||||||    
T  43359136 tcgtgaacttagtttagttggtagaaacaatgtataatatatacaagatccgaaattcaaactccaacca 43359067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 3416617 - 3416573
Alignment:
Q  136 cttaacttagttgataggaacaatgcataatatatacaatgtctg 180  Q
    ||||||| ||||||||| ||||||| ||||||||||||| |||||    
T  3416617 cttaactcagttgatagaaacaatgtataatatatacaaggtctg 3416573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 5107308 - 5107236
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccacca 201  Q
    |||||||||||||| ||||| || ||| |||||||||||||| ||| ||| ||  ||| |||||| |||||||    
T  5107308 tcgtgagcttaactcagttggtatgaataatgcataatatatgcaaggtccgaggttcgaaccccgaccacca 5107236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 7149876 - 7149920
Alignment:
Q  155 acaatgcataatatatacaatgtctgaaattcaaaccccaaccac 199  Q
    |||||||||||||||||||||| ||||  |||||||||| |||||    
T  7149876 acaatgcataatatatacaatgcctgaggttcaaacccccaccac 7149920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Complemental strand, 7336378 - 7336342
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataa 165  Q
    ||||||||||| || ||||||||||||||||||||||    
T  7336378 tcgtgagcttagctcagttgataggaacaatgcataa 7336342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 7713529 - 7713593
Alignment:
Q  128 ttcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccc 192  Q
    |||||||| |||||| |||||||| ||| |||||||||||||| ||| || || | |||||||||    
T  7713529 ttcgtgagtttaactcagttgatatgaataatgcataatatatgcaaggtttggagttcaaaccc 7713593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 18278321 - 18278265
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattc 186  Q
    |||||| |||||| ||||| || |||||||||||||||||| ||| ||| |||||||    
T  18278321 cgtgagtttaactcagttggtaagaacaatgcataatatatgcaaggtccgaaattc 18278265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 40445981 - 40446033
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctga 181  Q
    ||||||| |||||| |||||||| | |||||||||||||||| ||| ||||||    
T  40445981 tcgtgagtttaactcagttgataaggacaatgcataatatatgcaaggtctga 40446033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 13121542 - 13121606
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaacccc 193  Q
    ||||||||||| |||||||| |||| |||||||||||||||| ||| ||||||| ||||||||||    
T  13121542 tcgtgagcttagcttagttggtagggacaatgcataatatatgcaaggtctgaagttcaaacccc 13121606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 38374956 - 38375028
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||||||||||||| |||| |||||||||||||||| ||| ||||| | ||||||||||  |||||||    
T  38374956 cgtgagcttaacttagttggtagggacaatgcataatatatgcaaggtctggagttcaaaccccggccaccac 38375028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 20960755 - 20960681
Alignment:
Q  128 ttcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||||||||||| ||| |||| || | ||||||||||| |||  |||||||||||||||||| |||||||    
T  20960755 ttcgtgagcttaacttaattggtagggacgacgcataatatatgcaagatctgaaattcaaaccccagccaccac 20960681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 40071031 - 40070962
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaacca 198  Q
    |||||||||||||| ||||| || |||||||||||||||||| ||| ||| ||| |||||||||| ||||    
T  40071031 tcgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtccgaagttcaaaccccgacca 40070962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 20403228 - 20403169
Alignment:
Q  132 tgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaacc 191  Q
    |||||||| || ||||||||||||||||||||||||||| ||| ||||||| ||| ||||    
T  20403228 tgagcttagctcagttgataggaacaatgcataatatatgcaaggtctgaagttcgaacc 20403169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 18635529 - 18635579
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctg 180  Q
    ||||||||||||| |||||||| | |||||||||||||||||||| |||||    
T  18635529 cgtgagcttaactcagttgataaggacaatgcataatatatacaaggtctg 18635579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 29737673 - 29737719
Alignment:
Q  131 gtgagcttaacttagttgataggaacaatgcataatatatacaatgt 177  Q
    |||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  29737673 gtgagcttaatttagttgctaggaacaatgcataatatatgcaatgt 29737719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 24837536 - 24837495
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||||||||||||||| ||||||| ||||||||||    
T  24837536 tcgtgagcttaacttagttgatatgaacaatacataatatat 24837495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 43034405 - 43034332
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||||||||||||| ||||| || | |||||||||||||||| ||| ||||||  ||||||||||  |||||||    
T  43034405 tcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtctgaggttcaaaccccggccaccac 43034332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 13984704 - 13984664
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  13984704 cgtgagcttaactcagttggtaggaacaatgcataatatat 13984664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 22164332 - 22164260
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccacca 201  Q
    ||||||| ||| |||||||| |||||||||||||||||||||  || |||||   |||||||||| |||||||    
T  22164332 tcgtgagtttagcttagttggtaggaacaatgcataatatatgtaaggtctggggttcaaaccccgaccacca 22164260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 37930905 - 37930837
Alignment:
Q  134 agcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||| | ||| |||| |||||||||||||||| ||| ||||||  |||||||||| ||||||||    
T  37930905 agcttaactcaattggtaggtacaatgcataatatatgcaaggtctgaggttcaaaccccgaccaccac 37930837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 202
Target Start/End: Complemental strand, 21317411 - 21317328
Alignment:
Q  119 ttatcggttttcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||| ||||||||||||||| || ||||| |||  |||||||||||||||| ||| ||| |   |||||||| ||||||||||    
T  21317411 ttatccgttttcgtgagcttagctcagttggtagagacaatgcataatatatgcaaggtcaggggttcaaacctcaaccaccac 21317328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 874457 - 874499
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatata 171  Q
    |||||| |||||||||||||||| | |||||||||||||||||    
T  874457 tcgtgaacttaacttagttgatatggacaatgcataatatata 874499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 170
Target Start/End: Original strand, 9196214 - 9196252
Alignment:
Q  132 tgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  9196214 tgagcttaacttagttgatatggacaatgcataatatat 9196252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 6459987 - 6459946
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||| |||||||| | ||||||||||||||||    
T  6459987 tcgtgagcttaactcagttgatatggacaatgcataatatat 6459946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 11949726 - 11949681
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    ||||||||||| || |||||||| ||||||| ||||||||||||||    
T  11949726 tcgtgagcttagctcagttgataagaacaatacataatatatacaa 11949681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 18541507 - 18541544
Alignment:
Q  137 ttaacttagttgataggaacaatgcataatatatacaa 174  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  18541507 ttaatttagttgatagaaacaatgcataatatatacaa 18541544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 21318312 - 21318243
Alignment:
Q  133 gagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||||||||| ||||| |||| |||||||||||||||| ||| ||||    |||||||||| ||||||||    
T  21318312 gagcttaactcagttggtagggacaatgcataatatatgcaaggtctagggttcaaaccccgaccaccac 21318243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 23171009 - 23171050
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||| ||||| ||||||||||| |||||||||    
T  23171009 tcgtgagcttaactcagttgttaggaacaatgtataatatat 23171050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 24079902 - 24079830
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||||| |||||||| ||||| |||||||||| |||| ||| ||| | | |||||||||| ||||||||    
T  24079902 tcgtgagcttagcttagttggtagga-caatgcataaaatatgcaaggtccggagttcaaaccccgaccaccac 24079830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 26871749 - 26871716
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgca 162  Q
    |||||||||||||| |||||||||||||||||||    
T  26871749 tcgtgagcttaactcagttgataggaacaatgca 26871716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 32923293 - 32923252
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||| ||||| || ||||||||||||||||||    
T  32923293 tcgtgagcttaactcagttggtatgaacaatgcataatatat 32923252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 45970770 - 45970729
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||| ||||| ||| |||||||||||||||||    
T  45970770 tcgtgagcttaactcagttggtagaaacaatgcataatatat 45970729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 51436669 - 51436628
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||| ||||||| |||||||| ||||||||||||||||||    
T  51436669 tcgtgaacttaactcagttgatacgaacaatgcataatatat 51436628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 9913897 - 9913969
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccacca 201  Q
    ||||||||||| || ||||| || ||||||||||||| ||||||||  |  | ||||||||||||| ||||||    
T  9913897 tcgtgagcttagctcagttggtatgaacaatgcataaaatatacaagattcggaattcaaaccccagccacca 9913969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 17216191 - 17216127
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaacccca 194  Q
    |||||||| | || |||||||| ||| |||||||||||||| ||| ||||||| ||| |||||||    
T  17216191 cgtgagctaagctcagttgataagaataatgcataatatatgcaaggtctgaagttcgaacccca 17216127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 22630423 - 22630351
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccacca 201  Q
    ||||||| ||| || ||||| |||  |||||||||||||||| ||| ||||||  |||||||||| |||||||    
T  22630423 tcgtgagattatctcagttggtagtgacaatgcataatatatgcaaggtctgaggttcaaaccccgaccacca 22630351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 41346755 - 41346799
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    ||||| ||||||| | ||||||| |||||||||||||||||||||    
T  41346755 cgtgaacttaactcaattgatagaaacaatgcataatatatacaa 41346799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 24614693 - 24614759
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaa 195  Q
    ||||||| |||||| |||||||||||| ||||||||||||||| |||||||| | |||||| |||||    
T  24614693 tcgtgagtttaactcagttgataggaataatgcataatatatataatgtctggagttcaaatcccaa 24614759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 5458134 - 5458072
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaacc 191  Q
    ||||||||||| || |||||||| |||||||||||||||||| ||| |||||  |||||||||    
T  5458134 tcgtgagcttagctcagttgataagaacaatgcataatatatgcaaggtctgggattcaaacc 5458072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 170
Target Start/End: Complemental strand, 21751690 - 21751648
Alignment:
Q  128 ttcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  21751690 ttcgtgagcttaacttagttggtaggaaaaatgcataatatat 21751648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 1285132 - 1285091
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||| |||||| |||||||||||||||||||||||||||    
T  1285132 tcgtgagtttaactcagttgataggaacaatgcataatatat 1285091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 2622323 - 2622364
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||| ||||||||||||||||||| ||||||||||    
T  2622323 tcgtgagcttagcttagttgataggaacaatacataatatat 2622364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 3584206 - 3584275
Alignment:
Q  133 gagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||||||||||||||| || | |||||||||||||||| ||| ||  || ||||||||||| ||||||||    
T  3584206 gagcttaacttagttggtaaggacaatgcataatatatgcaaggtacgagattcaaaccccgaccaccac 3584275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 47663422 - 47663373
Alignment:
Q  153 gaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||||||| ||||||||||||| ||||||| |||||||||| ||||||||    
T  47663422 gaacaatgtataatatatacaaggtctgaagttcaaaccccgaccaccac 47663373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 12167422 - 12167478
Alignment:
Q  146 ttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||||| |||||||||||||||||| ||| ||| |  ||||||||||||||||||||    
T  12167422 ttgatatgaacaatgcataatatattcaaggtccgggattcaaaccccaaccaccac 12167478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 21928178 - 21928119
Alignment:
Q  132 tgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaacc 191  Q
    ||||||||||||||||| || | |||||||||||| ||| ||| |||||| |||||||||    
T  21928178 tgagcttaacttagttggtatggacaatgcataatttatgcaaggtctgagattcaaacc 21928119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 170
Target Start/End: Complemental strand, 43539165 - 43539126
Alignment:
Q  131 gtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||| || |||||||||||||||||||||||||||    
T  43539165 gtgagcttagctcagttgataggaacaatgcataatatat 43539126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 964804 - 964762
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatata 171  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||    
T  964804 tcgtgagcttaactcagtcgatagaaacaatgcataatatata 964762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 170
Target Start/End: Original strand, 15015242 - 15015280
Alignment:
Q  132 tgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  15015242 tgagcttaactcagttgataagaacaatgcataatatat 15015280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 31037704 - 31037662
Alignment:
Q  131 gtgagcttaacttagttgataggaacaatgcataatatataca 173  Q
    ||||| |||||| ||||| ||||||||||||||||||||||||    
T  31037704 gtgagtttaactcagttggtaggaacaatgcataatatataca 31037662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 36341125 - 36341055
Alignment:
Q  132 tgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||||| ||||| || ||||||||||||| |||||||| ||| | | |||||||| | ||||||||    
T  36341125 tgagcttaactcagttggtatgaacaatgcataaaatatacaaggtccggagttcaaacctcgaccaccac 36341055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 3671846 - 3671895
Alignment:
Q  153 gaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||||||||||||||||| ||| ||||| | |||||||||| ||||||||    
T  3671846 gaacaatgcataatatatgcaaggtctggagttcaaaccccgaccaccac 3671895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 21554997 - 21554924
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||||||||||||||||||| |||| | ||||| |||||||| ||| |||    ||||||||||| ||||||||    
T  21554997 tcgtgagcttaacttagttggtagggataatgcttaatatatgcaaggtccaggattcaaaccccgaccaccac 21554924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 28200448 - 28200407
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||| ||||| |||||||||| ||||||||||    
T  28200448 tcgtgagcttaactcagttggtaggaacaatacataatatat 28200407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 30857246 - 30857319
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||| ||| |||||||| || | |||||||||||||||| ||| || |  | |||||||||||||||||||    
T  30857246 tcgtgagtttagcttagttggtatggacaatgcataatatatgcaaggttttgagttcaaaccccaaccaccac 30857319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 35142212 - 35142139
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||||| || |||||||| | |||||||||||||||| ||| || |||  ||| |||||| ||||||||    
T  35142212 tcgtgagcttagctcagttgatatggacaatgcataatatatgcaaagtttgaggttcgaaccccgaccaccac 35142139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 38435989 - 38435956
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgca 162  Q
    |||||||||||||| |||||||||||||||||||    
T  38435989 tcgtgagcttaactcagttgataggaacaatgca 38435956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 42829297 - 42829256
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||| ||| |||||||||| ||||||||||||||||    
T  42829297 tcgtgagcttgactcagttgatagggacaatgcataatatat 42829256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 42995274 - 42995307
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgca 162  Q
    |||||||||||||| |||||||||||||||||||    
T  42995274 tcgtgagcttaactcagttgataggaacaatgca 42995307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 7262735 - 7262691
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    |||||||||| || | |||||| ||||||||||||||||||||||    
T  7262735 cgtgagcttacctcaattgataagaacaatgcataatatatacaa 7262691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 19036164 - 19036101
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaacccc 193  Q
    ||||||||||| |||||||| ||||| |||||||||| |||| ||| ||||| | ||||||||||    
T  19036164 tcgtgagcttagcttagttggtagga-caatgcataaaatatgcaaggtctggagttcaaacccc 19036101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 20718472 - 20718535
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaacccc 193  Q
    ||||||||||| |||||||| ||||| |||||||||| |||| ||| ||||| | ||||||||||    
T  20718472 tcgtgagcttagcttagttggtagga-caatgcataaaatatgcaaggtctggagttcaaacccc 20718535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 23863763 - 23863723
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatata 169  Q
    |||||||||||||||||||| || | |||||||||||||||    
T  23863763 tcgtgagcttaacttagttggtaaggacaatgcataatata 23863723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 28323561 - 28323601
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||| | |||||||| ||||||||||||||||||    
T  28323561 cgtgagcttaattcagttgataagaacaatgcataatatat 28323601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 39926601 - 39926553
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgt 177  Q
    ||||||||||| || |||||||| | |||||||||||||||| ||||||    
T  39926601 tcgtgagcttagctcagttgataaggacaatgcataatatatgcaatgt 39926553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 41624693 - 41624733
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatata 169  Q
    ||||||||||| ||| || ||||||||||||||||||||||    
T  41624693 tcgtgagcttagcttggtggataggaacaatgcataatata 41624733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 48980485 - 48980537
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctga 181  Q
    ||||||||||| || ||||| || | ||||||||||||||||||||| |||||    
T  48980485 tcgtgagcttagctcagttggtatggacaatgcataatatatacaatatctga 48980537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 46334775 - 46334837
Alignment:
Q  131 gtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaacccc 193  Q
    |||| ||||||| |||||||| ||||||||||||| |||||||| |||||| |||||||||||    
T  46334775 gtgaacttaactcagttgataagaacaatgcataaaatatacaaggtctgagattcaaacccc 46334837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 41032929 - 41032990
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaac 190  Q
    |||||||||||||| |||||||| ||||||||||||| |||||||| ||| |||||| ||||    
T  41032929 tcgtgagcttaactcagttgatatgaacaatgcataaaatatacaaggtccgaaattgaaac 41032990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 26086927 - 26086978
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctg 180  Q
    |||||||||||||| ||||| || || |||||||||||||||||||||||||    
T  26086927 tcgtgagcttaactcagttggtatgatcaatgcataatatatacaatgtctg 26086978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 28832232 - 28832161
Alignment:
Q  131 gtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||||||||||| ||||| || |||||||||||||||||| ||| ||||||  |||||| ||| ||||||||    
T  28832232 gtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtctgaggttcaaatcccgaccaccac 28832161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 44220985 - 44221036
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctg 180  Q
    ||||||||||||||||||||||||  |||||||| ||||||||||| |||||    
T  44220985 tcgtgagcttaacttagttgatagagacaatgcacaatatatacaaggtctg 44221036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 199
Target Start/End: Original strand, 7550894 - 7550964
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccac 199  Q
    |||||||||||||| |||||||| ||||||||||||| |||||||| ||| |  |||| |||||| |||||    
T  7550894 tcgtgagcttaactcagttgatatgaacaatgcataaaatatacaaggtccgggattcgaaccccgaccac 7550964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 10841900 - 10841962
Alignment:
Q  131 gtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaacccc 193  Q
    |||||||||||| |||||||| | ||||||||||||||||| || || ||| |||||||||||    
T  10841900 gtgagcttaactcagttgatatggacaatgcataatatatataaggtttgagattcaaacccc 10841962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 13234079 - 13234149
Alignment:
Q  132 tgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||||||| || ||||| ||||||||| ||||||||||| ||| |||||| | ||||||||| ||||||||    
T  13234079 tgagcttagctcagttggtaggaacaacgcataatatatgcaaggtctgagaatcaaaccccgaccaccac 13234149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 170
Target Start/End: Complemental strand, 29701384 - 29701342
Alignment:
Q  128 ttcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||||||||||||| | ||||||||||||||||    
T  29701384 ttcgtgagcttaacttagttgatatggacaatgcataatatat 29701342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 3157756 - 3157707
Alignment:
Q  153 gaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||||||||||||||||||||| || |||  |||||||||||||||||||    
T  3157756 gaacaatgcataatatatacaaggtttgaggttcaaaccccaaccaccac 3157707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 3573387 - 3573346
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||| ||||| |||||||||||||||||||||    
T  3573387 tcgtgagcttaactcagttggtaggaacaatgcataatatat 3573346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 22388230 - 22388165
Alignment:
Q  137 ttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||||||||||| ||||||||||||||||  || ||  || |||||||| |||||||||||    
T  22388230 ttaacttagttgatagggacaatgcataatatatgtaacgttcgagattcaaactccaaccaccac 22388165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 27853353 - 27853398
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    |||||||||||||| ||||| || ||||||||||||||||||||||    
T  27853353 tcgtgagcttaactcagttggtatgaacaatgcataatatatacaa 27853398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 30521865 - 30521938
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||||||||||||| |||||| |||| ||||||||||||||| ||| ||| |  |||||||  |||||||||||    
T  30521865 tcgtgagcttaactcagttgaaaggagcaatgcataatatatgcaaggtccgggattcaaattccaaccaccac 30521938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 48530863 - 48530791
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||| |||||| |||||| ||||||||||||||| |||| ||| ||||| | ||||||||||| |||||||    
T  48530863 tcgtgagtttaactcagttgaaaggaacaatgcataa-atatgcaaagtctggagttcaaaccccagccaccac 48530791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 3431328 - 3431400
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccacca 201  Q
    ||||||| |||||| ||||| |||||| |||||||||||||| ||||||  ||  |||||||||| |||||||    
T  3431328 tcgtgagtttaactcagttggtaggaagaatgcataatatatgcaatgtacgaggttcaaaccccgaccacca 3431400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 10292935 - 10292975
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||||| |||||||||| ||||||||||||||||    
T  10292935 cgtgagcttaactcagttgatagggacaatgcataatatat 10292975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 16475976 - 16475904
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccacca 201  Q
    ||||||| |||||||||||| |||||||||| ||||||||||  || |||  |  ||||||||||||||||||    
T  16475976 tcgtgagtttaacttagttggtaggaacaatacataatatatgtaaggtccaaggttcaaaccccaaccacca 16475904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 16033513 - 16033462
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctg 180  Q
    |||||||||| ||| |||||||||| |||||||||||||||| ||| |||||    
T  16033513 tcgtgagcttgactcagttgatagggacaatgcataatatatgcaaggtctg 16033462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 30799325 - 30799254
Alignment:
Q  131 gtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||| || | |||||| |||||||||||  ||||| ||| ||| || ||||||||||||||||||||    
T  30799325 gtgagcttagctaaattgatatgaacaatgcattgtatatgcaaggtccgagattcaaaccccaaccaccac 30799254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 32497545 - 32497494
Alignment:
Q  128 ttcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtct 179  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||| ||| ||||    
T  32497545 ttcgttagcttaactcagttggtaggaacaatgcataatatatgcaaggtct 32497494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 170
Target Start/End: Complemental strand, 33229743 - 33229704
Alignment:
Q  131 gtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  33229743 gtgagcttaactcagttggtaggaacaatgcataatatat 33229704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 170
Target Start/End: Complemental strand, 2889990 - 2889948
Alignment:
Q  128 ttcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||||||| ||||| |||| ||||||||||||||||    
T  2889990 ttcgtgagcttaactcagttggtagggacaatgcataatatat 2889948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 4770689 - 4770639
Alignment:
Q  131 gtgagcttaacttagttgataggaacaatgcataatatatacaatgtctga 181  Q
    |||||||||||| |||||||| ||||||||||| ||||||| || ||||||    
T  4770689 gtgagcttaactcagttgatatgaacaatgcatgatatatataaggtctga 4770639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 12522180 - 12522110
Alignment:
Q  131 gtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccacca 201  Q
    ||||||||| || | ||| || |||||| ||||||||||||||| ||||||  |||||||||| |||||||    
T  12522180 gtgagcttagctcaattggtatgaacaacgcataatatatacaaggtctgaggttcaaaccccgaccacca 12522110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 170
Target Start/End: Complemental strand, 16967258 - 16967216
Alignment:
Q  128 ttcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||| ||||||||||| | ||||||||||||||||    
T  16967258 ttcgtgagcttagcttagttgatatggacaatgcataatatat 16967216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 18091201 - 18091247
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcat-aatatatacaa 174  Q
    |||||||||||||| |||||||||| ||||||||| |||||||||||    
T  18091201 tcgtgagcttaactcagttgatagggacaatgcataaatatatacaa 18091247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 37493363 - 37493405
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatata 171  Q
    |||||||||||||||||||| | ||||||||||||||| ||||    
T  37493363 tcgtgagcttaacttagttggttggaacaatgcataatgtata 37493405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 39949815 - 39949861
Alignment:
Q  134 agcttaacttagttgataggaacaatgcataatatatacaatgtctg 180  Q
    ||||||||| ||||| || |||||||||||||||||||||| |||||    
T  39949815 agcttaactcagttggtaagaacaatgcataatatatacaaggtctg 39949861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 2884511 - 2884466
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    |||||| ||||||| |||||||| | ||||||||||||||||||||    
T  2884511 tcgtgaccttaactcagttgatatggacaatgcataatatatacaa 2884466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 12213993 - 12214042
Alignment:
Q  131 gtgagcttaacttagttgataggaacaatgcataatatatacaatgtctg 180  Q
    ||||||||| || |||||||||||||||| |||||||||| ||| |||||    
T  12213993 gtgagcttagctcagttgataggaacaatacataatatatgcaaggtctg 12214042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 14880825 - 14880878
Alignment:
Q  128 ttcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctga 181  Q
    |||||||||||| |||||||  |||| |||||||||||||||| ||| ||||||    
T  14880825 ttcgtgagcttagcttagttagtagggacaatgcataatatatgcaaggtctga 14880878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 17139580 - 17139507
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||||| || ||||| |||| |||||||||||||||| ||| ||| |   |||||||||| ||||||||    
T  17139580 tcgtgagcttagctcagttggtagggacaatgcataatatattcaaggtccggggttcaaaccccgaccaccac 17139507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 30678876 - 30678835
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||| ||||| |||| ||||||||||||||||    
T  30678876 tcgtgagcttaactcagttggtagggacaatgcataatatat 30678835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 31385153 - 31385198
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    |||||||||||||| ||||| |||||||  ||||||||||||||||    
T  31385153 tcgtgagcttaactcagttggtaggaacgctgcataatatatacaa 31385198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 33020106 - 33020033
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||||| || |  || |||| |||||||||||||||| ||| ||||||  ||||||||||| |||||||    
T  33020106 tcgtgagcttagctcaactggtagggacaatgcataatatatgcaaggtctgaggttcaaaccccagccaccac 33020033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 35442849 - 35442894
Alignment:
Q  125 gttttcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||||| |||| ||||| || ||||||||||||||||||    
T  35442849 gttttcgtgagctaaactcagttggtatgaacaatgcataatatat 35442894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 41998349 - 41998394
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    ||||||| |||||| |||||||||| ||||| ||||||||||||||    
T  41998349 tcgtgagattaactcagttgatagggacaattcataatatatacaa 41998394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 42045435 - 42045362
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||||| || ||||| || | |||||||||||||||| ||| ||||| | ||||||||||  |||||||    
T  42045435 tcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctggagttcaaaccccggccaccac 42045362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 44243871 - 44243944
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||| ||| || ||||| |||||||||||||||||||||  || |||   | |||||||||||||||||||    
T  44243871 tcgtgagtttagctcagttggtaggaacaatgcataatatatgtaaggtccagagttcaaaccccaaccaccac 44243944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 49222814 - 49222855
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||| | ||||||||||||||||| |||||||    
T  49222814 tcgtgagcttaactcaattgataggaacaatgcacaatatat 49222855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 50372420 - 50372351
Alignment:
Q  133 gagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||| || ||||||||  ||||||||||||||||||  | ||||||  |||||||| ||||||||||    
T  50372420 gagcttagctcagttgatataaacaatgcataatatatatcaggtctgaggttcaaacctcaaccaccac 50372351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 5279433 - 5279361
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccacca 201  Q
    ||||||| |||||| ||| | || | |||||||||||||||| ||||||||| | |||||||| | |||||||    
T  5279433 tcgtgagtttaactcagtcggtatggacaatgcataatatatgcaatgtctggagttcaaacctcgaccacca 5279361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 5291150 - 5291110
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||| |||| ||||| |||||||||||||||||||||    
T  5291150 cgtgagctcaactcagttggtaggaacaatgcataatatat 5291110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 10356253 - 10356205
Alignment:
Q  122 tcggttttcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||| |||||||||||||| ||||| || | ||||||||||||||||    
T  10356253 tcggttatcgtgagcttaactcagttggtatggacaatgcataatatat 10356205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Complemental strand, 28568898 - 28568862
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataa 165  Q
    |||||||||||||| || |||||||||||||||||||    
T  28568898 tcgtgagcttaactcagctgataggaacaatgcataa 28568862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 30279683 - 30279635
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgt 177  Q
    ||||||||||| || |||||||||| ||||| |||||||||| ||||||    
T  30279683 tcgtgagcttagctcagttgataggtacaatacataatatatgcaatgt 30279635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 32950823 - 32950751
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||||||| ||||| ||  ||||||||||||||||| ||| ||| | | |||||||| | ||||||||    
T  32950823 cgtgagcttaactcagttggtataaacaatgcataatatatgcaaggtccggagttcaaacctcgaccaccac 32950751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 41019752 - 41019708
Alignment:
Q  137 ttaacttagttgataggaacaatgcataatatatacaatgtctga 181  Q
    |||||||||||  ||||||||||||||||||||| ||| ||||||    
T  41019752 ttaacttagtttgtaggaacaatgcataatatatgcaaagtctga 41019708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 13496114 - 13496183
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaacca 198  Q
    |||||||||||||| |||||||| |||||||||||||||||| ||| ||| | | |||||||||| ||||    
T  13496114 tcgtgagcttaactcagttgatatgaacaatgcataatatatgcaaggtccggagttcaaaccccgacca 13496183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 404159 - 404210
Alignment:
Q  127 tttcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtc 178  Q
    |||||||||||||||||||||| || | |||||||||||||||| |||||||    
T  404159 tttcgtgagcttaacttagttggtaaggacaatgcataatatatgcaatgtc 404210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 2445297 - 2445342
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    |||| ||||||||| |||||||| ||||||||||||||||||||||    
T  2445297 tcgtaagcttaactcagttgatatgaacaatgcataatatatacaa 2445342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 18313931 - 18313967
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataa 165  Q
    |||||||||||||| ||||||||||||||||||||||    
T  18313931 tcgtgagcttaactcagttgataggaacaatgcataa 18313967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 19277572 - 19277612
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatata 169  Q
    |||||| ||||||| ||||||||||||||||||||||||||    
T  19277572 tcgtgaacttaactcagttgataggaacaatgcataatata 19277612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 29069481 - 29069545
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaacccc 193  Q
    ||||||||||| || |||||||||| ||||||||||||||||  || ||||||  ||||||||||    
T  29069481 tcgtgagcttagctcagttgatagggacaatgcataatatatgaaaagtctgaggttcaaacccc 29069545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 12412275 - 12412326
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctg 180  Q
    |||||||||||||||||||| |||  |||||||||||||||| ||| |||||    
T  12412275 tcgtgagcttaacttagttggtagagacaatgcataatatatgcaaggtctg 12412326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 12412769 - 12412820
Alignment:
Q  128 ttcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtct 179  Q
    |||||||||||||||||||| ||| | |||| |||||| |||||||||||||    
T  12412769 ttcgtgagcttaacttagttcatatggacaacgcataaaatatacaatgtct 12412820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 10278458 - 10278524
Alignment:
Q  136 cttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||| | |||||| | |||||||||||||||| |||  |||||| ||| |||||||||||||||    
T  10278458 cttaactcaattgatatggacaatgcataatatatgcaagatctgaagttcgaaccccaaccaccac 10278524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 14350947 - 14350992
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    ||||||| |||||| |||||||| ||||||||||||| ||||||||    
T  14350947 tcgtgagtttaactcagttgatatgaacaatgcataaaatatacaa 14350992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 14552335 - 14552380
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    |||||||||||||| |||||||||  | ||||||||||||||||||    
T  14552335 tcgtgagcttaactcagttgatagagataatgcataatatatacaa 14552380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 16125089 - 16125048
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||| ||||||| || ||||||||||||||||||    
T  16125089 tcgtgagcttaaattagttggtatgaacaatgcataatatat 16125048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 166
Target Start/End: Complemental strand, 20480694 - 20480657
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataat 166  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  20480694 tcgtgagcttaactcagttggtaggaacaatgcataat 20480657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 27080863 - 27080794
Alignment:
Q  134 agcttaacttagttga-taggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||| |||| | |||| |||||||||||||||| |||  |||| |||||||||||| ||||||||    
T  27080863 agcttaactcagtttagtagggacaatgcataatatatgcaagctctggaattcaaaccccgaccaccac 27080794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 28758863 - 28758794
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaacca 198  Q
    |||||||||||||| | || ||||| |||| ||||||||||| ||||||||    |||||||||||||||    
T  28758863 tcgtgagcttaactcaattaatagggacaaagcataatatatgcaatgtctagggttcaaaccccaacca 28758794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 28951397 - 28951438
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||| ||||| || ||||||||||||||||||    
T  28951397 tcgtgagcttaactcagttggtatgaacaatgcataatatat 28951438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 3808180 - 3808108
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||| ||||||| ||||  || | |||||||||||||||| ||| ||| || |||||||||||| |||||||    
T  3808180 cgtgaacttaactcagttagtaaggacaatgcataatatatgcaaggtccgagattcaaaccccagccaccac 3808108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 12904379 - 12904339
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||| || |||||||| ||||||||||||||||||    
T  12904379 cgtgagcttacctcagttgatatgaacaatgcataatatat 12904339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 32524483 - 32524411
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccacca 201  Q
    |||||||||||||| | ||| |||| |||||||||||||||| ||| |||     ||||||||||||||||||    
T  32524483 tcgtgagcttaactcaattggtagggacaatgcataatatatgcaaagtccagggttcaaaccccaaccacca 32524411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 48517669 - 48517714
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||    
T  48517669 tcgtgagtttaactcagttgataggaacaatgcataatatatacaa 48517714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 38573634 - 38573586
Alignment:
Q  131 gtgagcttaacttagttgataggaacaatgcataatatatacaatgtct 179  Q
    |||||||||||| |||||||| |||||||||||||||||||||| ||||    
T  38573634 gtgagcttaactcagttgataagaacaatgcataatatatacaaggtct 38573586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 43334576 - 43334508
Alignment:
Q  128 ttcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaac 196  Q
    ||||||||||||||| || || || | || ||||||||||||||||| |||||| ||||||||||||||    
T  43334576 ttcgtgagcttaactcagctggtaaggaccatgcataatatatacaaggtctgagattcaaaccccaac 43334508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 1757732 - 1757681
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctg 180  Q
    |||||||||||||| ||||| ||||||||||||||||||||| ||| |||||    
T  1757732 tcgtgagcttaactcagttggtaggaacaatgcataatatatgcaacgtctg 1757681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 21594702 - 21594763
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaacc 191  Q
    |||||||||||||||||||| |||| |||||||||| ||||| ||| ||||||| ||||||||    
T  21594702 tcgtgagcttaacttagttgctagg-acaatgcatactatatgcaaggtctgaagttcaaacc 21594763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 24088362 - 24088312
Alignment:
Q  131 gtgagcttaacttagttgataggaacaatgcataatatatacaatgtctga 181  Q
    ||||||||| |||| |||||||||| ||||||||||||||| |||||||||    
T  24088362 gtgagcttagcttaattgataggaataatgcataatatatataatgtctga 24088312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 39100476 - 39100434
Alignment:
Q  132 tgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    ||||||||||| |||||||| ||||||||||||||||||||||    
T  39100476 tgagcttaactcagttgataagaacaatgcataatatatacaa 39100434  T

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Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 170
Target Start/End: Complemental strand, 52543752 - 52543714
Alignment:
Q  132 tgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  52543752 tgagcttaacttagttggtaggaacaatgcataatatat 52543714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 23332648 - 23332689
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  23332648 tcgtgaacttaacttagttgatatgaacaatgcataatatat 23332689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 32753826 - 32753871
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||    
T  32753826 tcgtgagcttgactcagttgatagggacaatgcataatatatacaa 32753871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 41168201 - 41168156
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    |||| |||||||||  ||||||||||||||||||||||||||||||    
T  41168201 tcgtaagcttaactcggttgataggaacaatgcataatatatacaa 41168156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 8942014 - 8942066
Alignment:
Q  128 ttcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctg 180  Q
    ||||||||||||||| ||||| || |||||||||||||||||| ||| |||||    
T  8942014 ttcgtgagcttaactcagttggtatgaacaatgcataatatatgcaaagtctg 8942066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 3177036 - 3176985
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctg 180  Q
    |||| ||||||||| ||||| ||||||||||||||||||||| ||| |||||    
T  3177036 tcgtaagcttaactcagttggtaggaacaatgcataatatatgcaaggtctg 3176985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 11574251 - 11574302
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctg 180  Q
    |||||||||||||| |||||||| | | |||||||||||||||||| |||||    
T  11574251 tcgtgagcttaactcagttgataaggataatgcataatatatacaaggtctg 11574302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 170
Target Start/End: Complemental strand, 54020710 - 54020671
Alignment:
Q  131 gtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||| |||||||| |||||||||||||||||||||    
T  54020710 gtgagcttagcttagttggtaggaacaatgcataatatat 54020671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 170
Target Start/End: Complemental strand, 5941358 - 5941316
Alignment:
Q  128 ttcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||||||| ||||| || ||||||||||||||||||    
T  5941358 ttcgtgagcttaactcagttggtatgaacaatgcataatatat 5941316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 12976664 - 12976614
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctg 180  Q
    |||||| |||||| |||||||||| |||||||||||||||| ||| |||||    
T  12976664 cgtgagtttaactcagttgatagggacaatgcataatatatgcaaggtctg 12976614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 170
Target Start/End: Complemental strand, 20223008 - 20222970
Alignment:
Q  132 tgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  20223008 tgagcttaacttagttggtaagaacaatgcataatatat 20222970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 165
Target Start/End: Complemental strand, 36918933 - 36918899
Alignment:
Q  131 gtgagcttaacttagttgataggaacaatgcataa 165  Q
    |||||||||||| ||||||||||||||||||||||    
T  36918933 gtgagcttaactcagttgataggaacaatgcataa 36918899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 171
Target Start/End: Complemental strand, 54044049 - 54044015
Alignment:
Q  137 ttaacttagttgataggaacaatgcataatatata 171  Q
    |||||||||||| ||||||||||||||||||||||    
T  54044049 ttaacttagttggtaggaacaatgcataatatata 54044015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 7464554 - 7464513
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||| ||||| |||| ||||||||||||||||    
T  7464554 tcgtgagcttaactcagttggtagggacaatgcataatatat 7464513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 7651185 - 7651226
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatata 171  Q
    ||||||||||||| |||||||||| |||||||||| ||||||    
T  7651185 cgtgagcttaactcagttgatagggacaatgcatagtatata 7651226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 10922375 - 10922330
Alignment:
Q  125 gttttcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||| ||||||||||||| ||||| |||| ||||||||||||||||    
T  10922375 gtttgcgtgagcttaactcagttggtagggacaatgcataatatat 10922330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 18737106 - 18737147
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    |||||||||||||||||||||||  || ||||||||||||||    
T  18737106 tcgtgagcttaacttagttgatataaagaatgcataatatat 18737147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 26859179 - 26859106
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||||||||| |||  |||| ||||  ||||||||||| || ||||||| ||||||| ||| |||||||    
T  26859179 tcgtgagcttaactttgttcgtagggacaacacataatatatataaggtctgaagttcaaacaccagccaccac 26859106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 32928650 - 32928578
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||||||| |||| ||| ||| |||||||||||||||||| ||  |||| | |||||||||| ||||||||    
T  32928650 tcgtgagcttagcttaattggtag-aacaatgcataatatatataagatctggagttcaaaccccgaccaccac 32928578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 47377412 - 47377367
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaa 174  Q
    |||||||||||||| ||||| || | ||||||||||||||||||||    
T  47377412 tcgtgagcttaactcagttggtaaggacaatgcataatatatacaa 47377367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 48924382 - 48924309
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    ||||||| ||| |||||||| |||| |||||| |||||||||||||  | ||| ||||||||||  ||||||||    
T  48924382 tcgtgagtttagcttagttggtagggacaatgtataatatatacaaactgtgagattcaaaccctgaccaccac 48924309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 51250296 - 51250223
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||||||||||||| ||||| || | |||||| ||||||||| ||| | ||||| |||||||||| | ||||||    
T  51250296 tcgtgagcttaactcagttggtaaggacaatgtataatatatgcaaggcctgaagttcaaaccccgatcaccac 51250223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 52453320 - 52453279
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||| ||||||| ||||| ||||||||||||||||    
T  52453320 tcgtgagcttagcttagttaatagggacaatgcataatatat 52453279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 9778871 - 9778827
Alignment:
Q  125 gttttcgtgagcttaacttagttgataggaacaatgcataatata 169  Q
    |||||||||||||||||| |||||||  | |||||||||||||||    
T  9778871 gttttcgtgagcttaactcagttgattaggacaatgcataatata 9778827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 22462311 - 22462351
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||||| |||||||| | ||||||||||||||||    
T  22462311 cgtgagcttaactcagttgataaggacaatgcataatatat 22462351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 22486682 - 22486722
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||||| ||||| || ||||||||||||||||||    
T  22486682 cgtgagcttaactcagttggtaagaacaatgcataatatat 22486722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 38221739 - 38221771
Alignment:
Q  142 ttagttgataggaacaatgcataatatatacaa 174  Q
    |||||||||| ||||||||||||||||||||||    
T  38221739 ttagttgataagaacaatgcataatatatacaa 38221771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 4469 - 4509
Alignment:
Q  130 cgtgagcttaacttagttgataggaacaatgcataatatat 170  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  4469 cgtgagcttaactaagttgataggaataatgcataatatat 4509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 5206 - 5253
Alignment:
Q  155 acaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||||||||||||||| ||| ||||||  |||||||||||||||||||    
T  5206 acaatgcataatatatgcaaggtctgaggttcaaaccccaaccaccac 5253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 99035 - 99086
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctg 180  Q
    |||||||||| ||| |||||||||| |||||||||||||||| ||| |||||    
T  99035 tcgtgagcttgactcagttgatagggacaatgcataatatatgcaaggtctg 99086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 202
Target Start/End: Complemental strand, 14254 - 14176
Alignment:
Q  124 ggttttcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||| ||||||| |||||| ||||| || |||||||||||||||||| ||| || ||   |||||||||| ||||||||    
T  14254 ggttctcgtgagtttaactcagttggtatgaacaatgcataatatatgcaaggtatgtggttcaaaccccgaccaccac 14176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 155 - 188
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgca 162  Q
    |||||||||||||| |||||||||||||||||||    
T  155 tcgtgagcttaactcagttgataggaacaatgca 188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 53443 - 53370
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaaccccaaccaccac 202  Q
    |||||||||||||| |||||  ||| ||||||||||| |||| ||| |||||   |||||||||| ||||||||    
T  53443 tcgtgagcttaactcagttggaagggacaatgcataaaatatgcaaggtctggggttcaaaccccgaccaccac 53370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 178
Target Start/End: Original strand, 119567 - 119616
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtc 178  Q
    |||||||||||||| |||||||||| |||||| ||||||| | |||||||    
T  119567 tcgtgagcttaactcagttgatagggacaatgtataatatttgcaatgtc 119616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 22909 - 22973
Alignment:
Q  129 tcgtgagcttaacttagttgataggaacaatgcataatatatacaatgtctgaaattcaaacccc 193  Q
    |||||||||||  |||||||||| ||||||||||||| |||| ||| ||| ||  ||||||||||    
T  22909 tcgtgagcttagtttagttgatatgaacaatgcataaaatatgcaaggtccgaggttcaaacccc 22973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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