View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2242R-Insertion-15 (Length: 287)

Name: NF2242R-Insertion-15
Description: NF2242R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2242R-Insertion-15
NF2242R-Insertion-15
[»] chr4 (56 HSPs)
chr4 (56-264)||(30064241-30064451)
chr4 (135-224)||(53831155-53831244)
chr4 (57-224)||(30064005-30064170)
chr4 (56-229)||(47742229-47742403)
chr4 (62-216)||(33641862-33642014)
chr4 (57-224)||(5547616-5547783)
chr4 (152-225)||(5547992-5548065)
chr4 (8-58)||(30220234-30220284)
chr4 (57-231)||(47742492-47742662)
chr4 (57-229)||(13388159-13388329)
chr4 (8-54)||(30280806-30280852)
chr4 (8-54)||(30304404-30304450)
chr4 (56-184)||(33642110-33642238)
chr4 (135-227)||(37831592-37831684)
chr4 (135-207)||(53831283-53831354)
chr4 (136-223)||(25423781-25423867)
chr4 (8-54)||(30271337-30271383)
chr4 (136-227)||(35901775-35901866)
chr4 (136-214)||(8143046-8143124)
chr4 (136-229)||(31761825-31761918)
chr4 (147-214)||(1186671-1186738)
chr4 (146-225)||(18961846-18961925)
chr4 (147-214)||(29776853-29776920)
chr4 (135-214)||(44271900-44271979)
chr4 (57-107)||(831176-831226)
chr4 (136-214)||(6033835-6033913)
chr4 (64-106)||(30626703-30626745)
chr4 (135-229)||(35830267-35830361)
chr4 (152-214)||(38828521-38828583)
chr4 (178-228)||(52865379-52865429)
chr4 (155-216)||(3369858-3369919)
chr4 (178-227)||(13825881-13825929)
chr4 (180-229)||(53578922-53578971)
chr4 (140-224)||(1420538-1420621)
chr4 (140-224)||(2181352-2181435)
chr4 (136-228)||(22589414-22589506)
chr4 (64-124)||(30626926-30626986)
chr4 (165-229)||(41148163-41148227)
chr4 (152-231)||(13306891-13306970)
chr4 (135-214)||(29860665-29860744)
chr4 (165-224)||(41148552-41148611)
chr4 (177-228)||(51362535-51362586)
chr4 (152-214)||(9592369-9592431)
chr4 (64-106)||(12689989-12690031)
chr4 (140-226)||(14449274-14449360)
chr4 (136-214)||(36945526-36945604)
chr4 (179-229)||(41467126-41467176)
chr4 (152-214)||(53060423-53060485)
chr4 (177-214)||(6033907-6033944)
chr4 (179-216)||(16322988-16323025)
chr4 (63-124)||(33508989-33509050)
chr4 (64-105)||(49000712-49000753)
chr4 (140-192)||(14060930-14060982)
chr4 (136-208)||(14816830-14816902)
chr4 (178-214)||(33166289-33166325)
chr4 (148-224)||(35615317-35615393)
[»] chr5 (37 HSPs)
chr5 (56-229)||(6464219-6464391)
chr5 (89-229)||(20126594-20126736)
chr5 (57-229)||(36361031-36361201)
chr5 (135-231)||(20126434-20126530)
chr5 (57-229)||(7611315-7611483)
chr5 (56-106)||(7899604-7899654)
chr5 (57-206)||(7611095-7611242)
chr5 (135-215)||(36361383-36361463)
chr5 (136-225)||(28769716-28769804)
chr5 (136-214)||(26366048-26366125)
chr5 (165-231)||(42585982-42586048)
chr5 (57-183)||(6463983-6464108)
chr5 (64-105)||(34969050-34969091)
chr5 (136-216)||(34969120-34969200)
chr5 (152-228)||(38163654-38163730)
chr5 (64-227)||(13428031-13428191)
chr5 (147-222)||(26702647-26702722)
chr5 (147-222)||(26972380-26972455)
chr5 (136-214)||(38162606-38162684)
chr5 (135-183)||(7899420-7899468)
chr5 (56-227)||(42169084-42169255)
chr5 (165-224)||(42586339-42586398)
chr5 (135-226)||(43355719-43355810)
chr5 (136-214)||(4146120-4146198)
chr5 (179-228)||(3999085-3999134)
chr5 (152-233)||(24405484-24405565)
chr5 (147-224)||(25693904-25693981)
chr5 (147-224)||(37897951-37898028)
chr5 (179-228)||(43098027-43098076)
chr5 (177-229)||(2974898-2974950)
chr5 (152-224)||(3333940-3334012)
chr5 (152-228)||(10169014-10169090)
chr5 (152-224)||(17235139-17235211)
chr5 (161-229)||(20364680-20364748)
chr5 (64-124)||(33087678-33087738)
chr5 (147-207)||(38974911-38974971)
chr5 (135-195)||(41138387-41138447)
[»] chr8 (45 HSPs)
chr8 (57-214)||(45163606-45163761)
chr8 (56-209)||(1003690-1003841)
chr8 (57-216)||(17512108-17512266)
chr8 (56-216)||(14170433-14170592)
chr8 (57-216)||(35795477-35795634)
chr8 (137-228)||(27225780-27225870)
chr8 (136-224)||(12278838-12278926)
chr8 (58-216)||(23475635-23475792)
chr8 (136-229)||(45522414-45522507)
chr8 (135-227)||(1003458-1003550)
chr8 (137-216)||(35795228-35795307)
chr8 (136-214)||(5916879-5916957)
chr8 (152-214)||(23936292-23936354)
chr8 (142-228)||(29340767-29340853)
chr8 (147-229)||(41602845-41602927)
chr8 (177-230)||(756121-756174)
chr8 (64-229)||(29196515-29196678)
chr8 (136-200)||(8409788-8409852)
chr8 (135-227)||(14170659-14170751)
chr8 (165-224)||(755906-755965)
chr8 (178-229)||(2802646-2802697)
chr8 (147-226)||(25896991-25897070)
chr8 (161-227)||(34539184-34539249)
chr8 (65-107)||(34539287-34539329)
chr8 (56-106)||(45163499-45163549)
chr8 (136-214)||(45308467-45308545)
chr8 (179-228)||(6041463-6041512)
chr8 (179-228)||(6045100-6045149)
chr8 (179-224)||(9499223-9499268)
chr8 (177-230)||(42217812-42217865)
chr8 (152-224)||(18092914-18092985)
chr8 (68-124)||(29219178-29219234)
chr8 (147-214)||(8347564-8347631)
chr8 (64-102)||(8409734-8409772)
chr8 (57-107)||(17512357-17512407)
chr8 (64-106)||(26889544-26889585)
chr8 (152-214)||(31947867-31947929)
chr8 (170-228)||(37263357-37263415)
chr8 (136-214)||(44807297-44807375)
chr8 (65-106)||(5899434-5899475)
chr8 (177-214)||(18650944-18650981)
chr8 (137-214)||(32498391-32498467)
chr8 (152-200)||(12280340-12280388)
chr8 (152-192)||(18621756-18621796)
chr8 (135-199)||(42075198-42075262)
[»] chr2 (47 HSPs)
chr2 (56-224)||(17850377-17850545)
chr2 (56-236)||(14815938-14816120)
chr2 (56-230)||(8740151-8740322)
chr2 (57-224)||(14815701-14815866)
chr2 (56-226)||(8740333-8740500)
chr2 (152-233)||(12802443-12802524)
chr2 (136-229)||(35500314-35500407)
chr2 (73-229)||(4423680-4423835)
chr2 (57-216)||(9780832-9780988)
chr2 (147-226)||(29370717-29370796)
chr2 (152-214)||(11363895-11363957)
chr2 (155-229)||(23993901-23993975)
chr2 (136-214)||(28719330-28719408)
chr2 (147-229)||(44078523-44078605)
chr2 (152-214)||(52278-52340)
chr2 (57-200)||(4423448-4423589)
chr2 (179-229)||(12948887-12948937)
chr2 (136-214)||(14983923-14984001)
chr2 (152-229)||(23686799-23686876)
chr2 (57-105)||(3198575-3198623)
chr2 (147-214)||(23048303-23048370)
chr2 (178-224)||(20662518-20662564)
chr2 (152-229)||(28733222-28733299)
chr2 (147-228)||(37431772-37431852)
chr2 (161-229)||(21631816-21631884)
chr2 (136-228)||(31227111-31227203)
chr2 (136-224)||(35500043-35500131)
chr2 (136-214)||(15023223-15023301)
chr2 (136-214)||(16238125-16238203)
chr2 (152-214)||(19889456-19889518)
chr2 (152-214)||(21633306-21633368)
chr2 (64-106)||(29370911-29370953)
chr2 (136-214)||(32661657-32661735)
chr2 (136-214)||(36286376-36286454)
chr2 (152-214)||(43891657-43891719)
chr2 (140-229)||(44297561-44297648)
chr2 (153-214)||(2755189-2755250)
chr2 (179-224)||(4856712-4856757)
chr2 (137-214)||(11188319-11188396)
chr2 (179-224)||(15023104-15023149)
chr2 (153-230)||(39672661-39672737)
chr2 (177-225)||(2609080-2609128)
chr2 (58-106)||(3198680-3198728)
chr2 (177-229)||(14489474-14489526)
chr2 (177-221)||(20650376-20650420)
chr2 (177-233)||(36177354-36177410)
chr2 (152-228)||(43890099-43890175)
[»] chr3 (48 HSPs)
chr3 (56-216)||(53254974-53255132)
chr3 (135-230)||(53255246-53255341)
chr3 (135-224)||(32831163-32831252)
chr3 (57-216)||(37755084-37755240)
chr3 (61-224)||(51453545-51453706)
chr3 (136-229)||(49001648-49001741)
chr3 (136-229)||(55228029-55228122)
chr3 (153-224)||(32831468-32831539)
chr3 (136-214)||(51224939-51225017)
chr3 (56-102)||(51453767-51453813)
chr3 (136-214)||(54476056-54476134)
chr3 (152-214)||(54477308-54477370)
chr3 (136-229)||(3354908-3355001)
chr3 (152-227)||(51226489-51226564)
chr3 (64-106)||(1807326-1807368)
chr3 (136-214)||(17256581-17256659)
chr3 (136-214)||(17258153-17258231)
chr3 (56-189)||(37754871-37755000)
chr3 (147-230)||(5049580-5049664)
chr3 (179-231)||(6128517-6128569)
chr3 (136-228)||(10732370-10732462)
chr3 (180-232)||(14349375-14349427)
chr3 (153-224)||(1807413-1807483)
chr3 (140-229)||(4474297-4474383)
chr3 (140-227)||(44586013-44586100)
chr3 (152-214)||(2181328-2181390)
chr3 (155-221)||(3354755-3354821)
chr3 (152-214)||(32772019-32772081)
chr3 (152-214)||(33447210-33447272)
chr3 (142-232)||(33944838-33944928)
chr3 (136-214)||(35495171-35495248)
chr3 (152-214)||(40988611-40988673)
chr3 (64-106)||(45333737-45333779)
chr3 (178-224)||(48348258-48348304)
chr3 (152-214)||(49002740-49002802)
chr3 (152-214)||(50380168-50380230)
chr3 (179-232)||(3193047-3193100)
chr3 (170-231)||(7218412-7218473)
chr3 (179-232)||(16883800-16883853)
chr3 (147-224)||(17773173-17773250)
chr3 (147-224)||(19074474-19074551)
chr3 (147-224)||(20432193-20432270)
chr3 (153-214)||(32770664-32770725)
chr3 (152-213)||(36315803-36315864)
chr3 (61-102)||(46335858-46335899)
chr3 (179-224)||(50420887-50420932)
chr3 (140-229)||(51315711-51315800)
chr3 (136-228)||(47284514-47284606)
[»] chr1 (59 HSPs)
chr1 (61-224)||(7196679-7196841)
chr1 (57-216)||(6129255-6129416)
chr1 (135-231)||(7196933-7197029)
chr1 (135-216)||(40876967-40877048)
chr1 (148-224)||(37008220-37008296)
chr1 (136-214)||(40345553-40345631)
chr1 (57-200)||(45719366-45719507)
chr1 (136-214)||(50503714-50503792)
chr1 (135-208)||(6129588-6129661)
chr1 (56-229)||(29816317-29816487)
chr1 (135-216)||(46895762-46895843)
chr1 (135-232)||(51549362-51549459)
chr1 (64-124)||(1406413-1406473)
chr1 (137-224)||(46895440-46895527)
chr1 (136-234)||(6912402-6912501)
chr1 (137-216)||(45719673-45719751)
chr1 (136-214)||(35580891-35580969)
chr1 (51-231)||(367057-367237)
chr1 (135-200)||(15788437-15788502)
chr1 (135-216)||(40876711-40876792)
chr1 (140-224)||(39642203-39642287)
chr1 (147-230)||(3814757-3814839)
chr1 (165-224)||(12075265-12075324)
chr1 (165-231)||(3815048-3815114)
chr1 (152-214)||(4474768-4474830)
chr1 (152-214)||(21258932-21258994)
chr1 (135-229)||(41915744-41915838)
chr1 (135-225)||(43117257-43117347)
chr1 (152-214)||(50504789-50504851)
chr1 (135-228)||(6606921-6607014)
chr1 (153-214)||(7058363-7058424)
chr1 (155-216)||(10231118-10231179)
chr1 (61-106)||(37008437-37008482)
chr1 (136-229)||(46038898-46038991)
chr1 (140-224)||(3377504-3377588)
chr1 (179-223)||(23953116-23953160)
chr1 (140-228)||(50401599-50401686)
chr1 (165-224)||(12074959-12075018)
chr1 (177-224)||(18632603-18632650)
chr1 (136-199)||(49695378-49695441)
chr1 (153-216)||(50877796-50877859)
chr1 (152-214)||(4476180-4476242)
chr1 (179-229)||(10532213-10532263)
chr1 (135-229)||(13344397-13344491)
chr1 (152-214)||(26811466-26811528)
chr1 (136-226)||(37696250-37696340)
chr1 (155-229)||(39384569-39384643)
chr1 (137-231)||(44743694-44743787)
chr1 (64-106)||(51690354-51690396)
chr1 (136-224)||(366889-366977)
chr1 (179-232)||(1484689-1484742)
chr1 (140-229)||(25085397-25085485)
chr1 (64-105)||(39384358-39384399)
chr1 (65-106)||(39384482-39384523)
chr1 (179-207)||(3612124-3612152)
chr1 (136-224)||(10532480-10532568)
chr1 (140-224)||(46573054-46573138)
chr1 (179-227)||(46880738-46880786)
chr1 (140-216)||(48441076-48441152)
[»] chr7 (54 HSPs)
chr7 (57-216)||(7873777-7873934)
chr7 (57-227)||(10691535-10691703)
chr7 (57-224)||(43077947-43078114)
chr7 (51-228)||(9477132-9477308)
chr7 (61-214)||(10691311-10691463)
chr7 (63-229)||(7873507-7873672)
chr7 (152-225)||(34116105-34116177)
chr7 (135-229)||(29933495-29933589)
chr7 (56-224)||(29933193-29933358)
chr7 (135-228)||(6385771-6385863)
chr7 (61-231)||(9142960-9143129)
chr7 (136-229)||(26787889-26787982)
chr7 (136-216)||(24679067-24679147)
chr7 (71-230)||(30283403-30283560)
chr7 (61-224)||(43091668-43091830)
chr7 (137-224)||(43092004-43092091)
chr7 (58-207)||(43077724-43077874)
chr7 (135-229)||(46199051-46199145)
chr7 (136-229)||(26974228-26974321)
chr7 (165-231)||(282853-282919)
chr7 (152-234)||(18186432-18186514)
chr7 (136-214)||(42436842-42436920)
chr7 (161-227)||(44565263-44565329)
chr7 (165-229)||(327430-327494)
chr7 (136-224)||(9477413-9477501)
chr7 (140-224)||(48059173-48059257)
chr7 (136-214)||(8409294-8409372)
chr7 (178-224)||(9500167-9500213)
chr7 (140-229)||(6792023-6792112)
chr7 (155-228)||(24432637-24432709)
chr7 (155-224)||(27756268-27756337)
chr7 (155-224)||(35793378-35793447)
chr7 (177-229)||(21939338-21939390)
chr7 (140-224)||(28350119-28350203)
chr7 (136-228)||(42437999-42438091)
chr7 (135-227)||(46265865-46265956)
chr7 (56-107)||(6385695-6385746)
chr7 (64-107)||(9143213-9143256)
chr7 (136-214)||(11742723-11742801)
chr7 (136-214)||(20588377-20588455)
chr7 (137-207)||(30505105-30505175)
chr7 (179-224)||(20185181-20185226)
chr7 (140-224)||(20505238-20505320)
chr7 (156-229)||(24432334-24432407)
chr7 (61-106)||(29933422-29933467)
chr7 (152-229)||(36801839-36801916)
chr7 (57-106)||(43091925-43091974)
chr7 (179-232)||(47909590-47909643)
chr7 (147-223)||(21505851-21505927)
chr7 (136-224)||(28960651-28960737)
chr7 (64-124)||(35828451-35828511)
chr7 (136-192)||(40790893-40790949)
chr7 (153-209)||(44135548-44135604)
chr7 (152-224)||(46266492-46266564)
[»] chr6 (24 HSPs)
chr6 (64-224)||(12798730-12798886)
chr6 (61-195)||(10582048-10582180)
chr6 (136-229)||(12799015-12799108)
chr6 (64-224)||(2538986-2539144)
chr6 (152-228)||(12203891-12203967)
chr6 (147-214)||(11623172-11623239)
chr6 (136-214)||(2017185-2017263)
chr6 (170-216)||(5003100-5003146)
chr6 (152-214)||(28574545-28574607)
chr6 (140-229)||(10727188-10727277)
chr6 (179-224)||(30369787-30369832)
chr6 (140-224)||(33401282-33401364)
chr6 (135-214)||(4793798-4793877)
chr6 (152-214)||(2173858-2173920)
chr6 (152-214)||(4037051-4037113)
chr6 (136-214)||(23350142-23350220)
chr6 (136-229)||(29873044-29873134)
chr6 (136-214)||(32591609-32591687)
chr6 (155-224)||(2164699-2164768)
chr6 (155-224)||(2176332-2176401)
chr6 (177-226)||(7504886-7504935)
chr6 (136-225)||(31001262-31001350)
chr6 (180-224)||(9070136-9070180)
chr6 (136-224)||(28960231-28960318)
[»] scaffold0468 (1 HSPs)
scaffold0468 (135-224)||(10354-10443)
[»] scaffold0854 (1 HSPs)
scaffold0854 (152-214)||(3366-3428)
[»] scaffold0019 (1 HSPs)
scaffold0019 (136-214)||(122552-122630)
[»] scaffold0172 (1 HSPs)
scaffold0172 (56-105)||(9782-9831)
[»] scaffold0182 (2 HSPs)
scaffold0182 (135-207)||(21185-21257)
scaffold0182 (57-124)||(21408-21473)
[»] scaffold0006 (1 HSPs)
scaffold0006 (136-224)||(162266-162354)
[»] scaffold0286 (2 HSPs)
scaffold0286 (152-214)||(20121-20183)
scaffold0286 (155-224)||(17641-17710)
[»] scaffold0025 (1 HSPs)
scaffold0025 (56-106)||(151510-151560)
[»] scaffold0016 (1 HSPs)
scaffold0016 (152-214)||(201232-201294)
[»] scaffold0725 (1 HSPs)
scaffold0725 (180-229)||(6698-6747)
[»] scaffold0028 (1 HSPs)
scaffold0028 (147-224)||(32243-32320)
[»] scaffold0005 (1 HSPs)
scaffold0005 (136-208)||(22809-22881)


Alignment Details
Target: chr4 (Bit Score: 128; Significance: 3e-66; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 56 - 264
Target Start/End: Original strand, 30064241 - 30064451
Alignment:
Q  56 aaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnn--tcaatacttagagggcagt 153  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||  ||||||||||||||| |          |||||||||||| | | ||    
T  30064241 aaaataaatacacacgtggcgtccacgtcaactttgacttggtcaaaattgacctgaggggccaaaactgcaaaaaaaaagtcaatacttagatgacggt 30064340  T
Q  154 tttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctattattatctactatgccaaaatat 253  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  30064341 tttgtagtttatttagttagggagccaaaatcgcaacttcttaaaacttagggagccaaaactactattaagcctattattatctactatgccaaaatat 30064440  T
Q  254 gctcatctcta 264  Q
     ||||||||||    
T  30064441 actcatctcta 30064451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 53831244 - 53831155
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||||||  |||||||||||||||||||||||||||   ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  53831244 tcaatacttaggaggcagttttgtagtttatttagttaggggaccaaaatcgcaacttcttaaaacatagggggccaaaactgctattaa 53831155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 57 - 224
Target Start/End: Complemental strand, 30064170 - 30064005
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagtttt 156  Q
    ||||||||||||||||| |||||||||  || ||||||||||||||||||    ||||| |||||||| |        ||||||||||  |||| |||||    
T  30064170 aaataaatacacacgtgacgtccatgtgtgcattgacttggtcaaaattggccagaggg-ccaaaactgcaaaaaag-tcaatacttaaggggcggtttt 30064073  T
Q  157 gtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||| |||||||||   ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  30064072 gtagtttacttagttaggggaccaaaatcgcaacttcttaaaacatagggggccaaaacttctattaa 30064005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 56 - 229
Target Start/End: Complemental strand, 47742403 - 47742229
Alignment:
Q  56 aaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnn-tcaatacttagagggcagtt 154  Q
    |||||||||||||| |||||||||| |||||||||||||||||| |||||    ||||||||||||||| |         ||||||||||  || |  ||    
T  47742403 aaaataaatacacaagtggcgtccaagtcagctttgacttggtcgaaatttgtctgaggggccaaaactgcaaaaaaaagtcaatacttaagggacgatt 47742304  T
Q  155 ttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||||||||||||||||||  ||||||||||||||||| | |||| |||| || ||||||| ||||||||||||    
T  47742303 ttgtagtttatttagttagggggccaaaatcgcaacttcctgaaacataggtggacaaaactgctattaaaccta 47742229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 216
Target Start/End: Complemental strand, 33642014 - 33641862
Alignment:
Q  62 aatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttttgtagt 161  Q
    ||||||||||||||||||||||  || ||||||| ||||||||||   || |||||||||||| |        ||||||| || ||||||||||||||||    
T  33642014 aatacacacgtggcgtccatgtgtgcattgactttgtcaaaattggtctg-ggggccaaaactgcaaaaaag-tcaatacgtaaagggcagttttgtagt 33641917  T
Q  162 ttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    |||||||||||||| | ||||||||||| |||||||||| || ||||||||||||    
T  33641916 ttatttagttaggaggtcaaaatcgcaatttcttaaaacataaggggccaaaact 33641862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 57 - 224
Target Start/End: Complemental strand, 5547783 - 5547616
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagtttt 156  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||| |||| ||||||| |        | ||||||| || ||| | |||    
T  5547783 aaataaatacacacgtggcgtccatatcagctttgacttagtcaaaattgatatggggggtcaaaactgccaaaaaatt-aatacttggaaggcggcttt 5547685  T
Q  157 gtagttta-tttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||| ||||||||||| ||||||||| ||||||||| |||   || ||||||||||| |||||||    
T  5547684 gtagtttattttagttaggaggccaaaatctcaacttcttgaaatacagagggccaaaactgctattaa 5547616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 5547992 - 5548065
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaa 225  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  5547992 gttttgtagtttatttaattaggaggccaaaatcgcaacttcttaaaacataggaggccaaaactgctattaaa 5548065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 30220284 - 30220234
Alignment:
Q  8 agtttgaatatcaaagttcctttagcattgcttgttggatatttaatcaaa 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30220284 agtttgaatatcaaagttcctttagcattgcttgttggatatttaatcaaa 30220234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 231
Target Start/End: Original strand, 47742492 - 47742662
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagtttt 156  Q
    |||||||||||||||| |||||||  |  || ||||||||||||||||||    | |||||||||||  |        ||||||||| | |||| |||||    
T  47742492 aaataaatacacacgtagcgtccacatgtgcattgacttggtcaaaattg----gcggggccaaaaccgcaaaaaaagtcaatacttggggggcggtttt 47742587  T
Q  157 gtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctatt 231  Q
    ||| ||||||||||||||  || ||||||| ||||||||||||| ||||||| ||||||| ||||||||| ||||    
T  47742588 gtaatttatttagttagggggctaaaatcgtaacttcttaaaacatagggggtcaaaactgctattaaacttatt 47742662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 13388329 - 13388159
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagtttt 156  Q
    ||||||||||| | ||||| || | |||||||||||||||||||||||||  ||| ||| | |||||| |        |||||| |||| |||| |||||    
T  13388329 aaataaatacatatgtggcatctacgtcagctttgacttggtcaaaattggcatgggggactaaaactgcaaaaaaa-tcaatatttagggggcggtttt 13388231  T
Q  157 gtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||||||||||||||||  ||||||||| | ||||||| |||| ||||||||||||||| | ||||| ||||    
T  13388230 gtagtttatttagttagg-ggccaaaatctctacttcttgaaacatagggggccaaaactgcaattaagccta 13388159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 30280852 - 30280806
Alignment:
Q  8 agtttgaatatcaaagttcctttagcattgcttgttggatatttaat 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  30280852 agtttgaatatcaaagttcctttagcattgcttgttggatatttaat 30280806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 30304404 - 30304450
Alignment:
Q  8 agtttgaatatcaaagttcctttagcattgcttgttggatatttaat 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  30304404 agtttgaatatcaaagttcctttagcattgcttgttggatatttaat 30304450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 184
Target Start/End: Original strand, 33642110 - 33642238
Alignment:
Q  56 aaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagaggg-cagtt 154  Q
    |||||||||||| | |||||||| | |||||||||||||||||||||||||  ||| |||| ||||||| |        ||||||||||| ||| |||||    
T  33642110 aaaataaatacatatgtggcgtctacgtcagctttgacttggtcaaaattggcatggggggtcaaaactgc-aaaaaagtcaatacttagggggacagtt 33642208  T
Q  155 ttgtagtttatttagttaggaagccaaaat 184  Q
    ||||||||||||||||||||  ||||||||    
T  33642209 ttgtagtttatttagttagggggccaaaat 33642238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 37831684 - 37831592
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacc 227  Q
    |||| |||||| |||| ||||||||  || |||  |||||  ||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  37831684 tcaaaacttagggggcggttttgtaagtttttttcttagggggccaaaatcgcaacttcttaaaacttagggggctaaaactgctattaaacc 37831592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 207
Target Start/End: Original strand, 53831283 - 53831354
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggg 207  Q
    |||||||||||||| | ||||||||||||||||| |||||| | |||||||||||||||||||||| ||||||    
T  53831283 tcaatacttagagg-cggttttgtagtttatttaattaggaggtcaaaatcgcaacttcttaaaacatagggg 53831354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 223
Target Start/End: Complemental strand, 25423867 - 25423781
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactatta 223  Q
    |||||||||| || | |||||||| ||||||| ||||||| || |||||||||||||| | |||| ||||||||||||||||||||||    
T  25423867 caatacttaggggacggttttgtattttattttgttaggaggcaaaaatcgcaacttc-tgaaacatagggggccaaaactactatta 25423781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 30271337 - 30271383
Alignment:
Q  8 agtttgaatatcaaagttcctttagcattgcttgttggatatttaat 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  30271337 agtttgaatatcaaagttcctttagcatttcttgttggatatttaat 30271383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 35901775 - 35901866
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacc 227  Q
    |||||| |||||||| |||||||| |||| ||||||||| ||||||||||||||||| |  |||| |||||| |||||| | | ||||||||    
T  35901775 caatacatagagggctgttttgtattttaattagttagggagccaaaatcgcaacttttagaaacataggggaccaaaagtgcaattaaacc 35901866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 8143124 - 8143046
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| |||||||||   ||||||||||||||||||||||| |||| ||||||||    
T  8143124 caatacatagggggctgttttgtattttaattagttaggggtccaaaatcgcaacttcttaaaacataggaggccaaaa 8143046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 229
Target Start/End: Original strand, 31761825 - 31761918
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||| ||| |||| ||||| || |||| |||||||||  |||||||||| |||||||| |||  ||||||||||||| ||| ||||||||||    
T  31761825 caatacatagggggctgttttctattttaattagttagggggccaaaatcgtaacttcttgaaatatagggggccaaaagtacaattaaaccta 31761918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 1186738 - 1186671
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||| |||||||| |||| |||||||||  |||||||||||||||| | |||| ||||||||||||||    
T  1186738 gggctgttttgtattttaattagttagggggccaaaatcgcaacttttaaaaagttagggggccaaaa 1186671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 225
Target Start/End: Complemental strand, 18961925 - 18961846
Alignment:
Q  146 agggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaa 225  Q
    ||||| |||||||| |||| |||||||||  |||||||||||||||| | ||||  ||||||||||||| ||| ||||||    
T  18961925 agggctgttttgtaatttaattagttaggtggccaaaatcgcaacttttgaaaagatagggggccaaaagtacaattaaa 18961846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 29776853 - 29776920
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||| |||||||| |||| ||||||||| | |||||||| || ||||||||||| |||||||||||||    
T  29776853 gggctgttttgtattttaattagttagggatccaaaatcacagcttcttaaaacatagggggccaaaa 29776920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 44271900 - 44271979
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    ||||||| ||| |||| |||||||| |||| ||||||||| | ||||||| ||||||||||||||| || | ||||||||    
T  44271900 tcaatacatagggggctgttttgtattttaattagttagggatccaaaattgcaacttcttaaaacatatgaggccaaaa 44271979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 831226 - 831176
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattga 107  Q
    ||||||||||||| ||||||||||  |||||||| ||||||||||||||||    
T  831226 aaataaatacacatgtggcgtccacatcagctttaacttggtcaaaattga 831176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 6033835 - 6033913
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| ||||||||   ||||||||||||||||||| |||| || ||||||||||    
T  6033835 caatacatagggggctgttttgtattttaattagttagagggccaaaatcgcaacttcttgaaacatatggggccaaaa 6033913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 30626745 - 30626703
Alignment:
Q  64 tacacacgtggcgtccatgtcagctttgacttggtcaaaattg 106  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  30626745 tacacacgtggcgtccatgtcagcgttgaattggtcaaaattg 30626703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 229
Target Start/End: Original strand, 35830267 - 35830361
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||||||||| |||  ||||||||||||||||| |||||   | |||||| ||||||||| |||  |||| |||||||||| ||||||| ||||    
T  35830267 tcaatacttagggggtggttttgtagtttatttatttaggggacaaaaatcacaacttcttgaaatataggaggccaaaactgctattaagccta 35830361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 38828583 - 38828521
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| ||||||| ||  ||||||||||||||||||||||| ||| |||||||||    
T  38828583 gttttgtattttaattagttatgagtccaaaatcgcaacttcttaaaacatagagggccaaaa 38828521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 52865429 - 52865379
Alignment:
Q  178 ccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    |||||||||||||||||||||||||| |||||  ||||| |||||||||||    
T  52865429 ccaaaatcgcaacttcttaaaacttatggggctgaaactgctattaaacct 52865379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 3369919 - 3369858
Alignment:
Q  155 ttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    ||||| ||||||| ||||||  ||||||||||||||||||| | ||||||||||| ||||||    
T  3369919 ttgtattttattttgttagggggccaaaatcgcaacttcttgatacttagggggcaaaaact 3369858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 13825929 - 13825881
Alignment:
Q  178 ccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacc 227  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  13825929 ccaaaatcgcaacttcttaaaactta-ggggctaaaactgctattaaacc 13825881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 53578922 - 53578971
Alignment:
Q  180 aaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||||||||||||||||||| ||||||||||||||  ||||||| ||||    
T  53578922 aaaatcgcaacttcttaaaacatagggggccaaaacggctattaagccta 53578971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 1420621 - 1420538
Alignment:
Q  140 acttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||| |||| |||||||||||| |||  |||||| ||||||||||||||||   |||| ||||||||| |||||| |||||||    
T  1420621 acttagggggcggttttgtagtttttttt-ttaggaggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaa 1420538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 2181352 - 2181435
Alignment:
Q  140 acttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||||||||||||||||||  |||  | |||| ||||||||||||||||| ||||| |||||| || |||| | |||||||    
T  2181352 acttagagggcagttttgtagttcttttcttaagga-gccaaaatcgcaacttcataaaagttagggagcaaaaagtgctattaa 2181435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 22589414 - 22589506
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    |||||| ||| |||| |||||||| |||| ||||||||| ||| ||||||||||||| |  |||  ||||||||||||| | | |||||||||    
T  22589414 caatacatagggggctgttttgtattttaattagttagggagcaaaaatcgcaacttttagaaagatagggggccaaaagtgcaattaaacct 22589506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 30626926 - 30626986
Alignment:
Q  64 tacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaact 124  Q
    ||||||| ||||||||| |||||| |||| ||||||||||||  |||| ||||||||||||    
T  30626926 tacacacatggcgtccacgtcagcgttgaattggtcaaaattagaatggggggccaaaact 30626986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 41148227 - 41148163
Alignment:
Q  165 tttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||||||||  || ||||||| |||||||| |||| ||||||||||||||| ||||||| ||||    
T  41148227 tttagttagggggctaaaatcggaacttcttgaaacatagggggccaaaactgctattaagccta 41148163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 13306891 - 13306970
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctatt 231  Q
    ||||| || |||| |||||||||| | |||||||||||||| | ||||  ||||||||||||| | | ||||||||||||    
T  13306891 gttttatattttaattagttaggaggtcaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaaacctatt 13306970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 214
Target Start/End: Complemental strand, 29860744 - 29860665
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    ||||||| |||||||| |||||||| |||| |||||||||   | ||||||||||||| | ||||  |||||||||||||    
T  29860744 tcaatacatagagggctgttttgtattttaattagttaggggactaaaatcgcaacttttgaaaagatagggggccaaaa 29860665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 41148552 - 41148611
Alignment:
Q  165 tttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||||||   |||||||| |||||||||||||  ||||||||||||||| |||||||    
T  41148552 tttagttaggggaccaaaatcacaacttcttaaaatatagggggccaaaactgctattaa 41148611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 51362586 - 51362535
Alignment:
Q  177 gccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    ||||||||||||||||   |||| ||||||||| ||||||||||||||||||    
T  51362586 gccaaaatcgcaactttagaaaagttagggggctaaaactactattaaacct 51362535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 9592369 - 9592431
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| |||||||| | |||||||||||||||| | ||||  |||||||||||||    
T  9592369 gttttgtattttaattagttagaaggccaaaatcgcaacttttgaaaagatagggggccaaaa 9592431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 12689989 - 12690031
Alignment:
Q  64 tacacacgtggcgtccatgtcagctttgacttggtcaaaattg 106  Q
    |||||| |||||||||| |||||| ||||||||||||||||||    
T  12689989 tacacatgtggcgtccacgtcagcattgacttggtcaaaattg 12690031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 14449360 - 14449274
Alignment:
Q  140 acttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaac 226  Q
    ||||| ||| |||||||||||||  |||  |||||  ||||||||| ||||||| | ||| ||||||||| |||||| |||||||||    
T  14449360 acttaaaggacagttttgtagttgtttttcttagggggccaaaatctcaacttcgtgaaagttagggggcgaaaactgctattaaac 14449274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 36945604 - 36945526
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| |||||||||  || ||||||||||||| | ||||  |||||||||||||    
T  36945604 caatacatagggggctgttttgtattttaattagttagggggcaaaaatcgcaacttttgaaaagatagggggccaaaa 36945526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 41467176 - 41467126
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||||| ||||| ||||||||||||| || |||||| ||||||||||||    
T  41467176 caaaatcgtaactttttaaaacttagggtgctaaaactgctattaaaccta 41467126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 53060485 - 53060423
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| ||| |||||  |||||||||||| ||||||||||| || ||||||||||    
T  53060485 gttttgtattttaattaattagggggccaaaatcgcaccttcttaaaacataaggggccaaaa 53060423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 6033907 - 6033944
Alignment:
Q  177 gccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||||||||||||||||||  |||||||||||||    
T  6033907 gccaaaatcgcaacttcttaaaatatagggggccaaaa 6033944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 16323025 - 16322988
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  16323025 caaaatcgcaacttcttaatacttaaggggccaaaact 16322988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 33509050 - 33508989
Alignment:
Q  63 atacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaact 124  Q
    |||||||||||||||||| ||  || ||||||||||||||||| |  || ||||||||||||    
T  33509050 atacacacgtggcgtccacgtgtgcattgacttggtcaaaatttatctggggggccaaaact 33508989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 49000753 - 49000712
Alignment:
Q  64 tacacacgtggcgtccatgtcagctttgacttggtcaaaatt 105  Q
    |||||| |||||||| |||||||| |||||||||||||||||    
T  49000753 tacacatgtggcgtctatgtcagcattgacttggtcaaaatt 49000712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 14060930 - 14060982
Alignment:
Q  140 acttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaactt 192  Q
    |||||| || |||||||||||||| |||  ||||| |||||||||||||||||    
T  14060930 acttaggggacagttttgtagttttttttcttagggagccaaaatcgcaactt 14060982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 14816830 - 14816902
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttaggggg 208  Q
    |||||| ||| |||| |||||||| |||| |||||||||   |||||||||||||||||  |||| |||||||    
T  14816830 caatacatagggggctgttttgtattttaattagttaggggtccaaaatcgcaacttctagaaacataggggg 14816902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 33166325 - 33166289
Alignment:
Q  178 ccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  33166325 ccaaaatcgcaacttcttaaaacatagagggccaaaa 33166289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 35615393 - 35615317
Alignment:
Q  148 ggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||||||||||| ||   |||||  ||||||||||||||||   |||| ||||||||| |||||| |||||||    
T  35615393 ggcagttttgtagttttttcctttagggggccaaaatcgcaactttagaaaagttagggggctaaaactgctattaa 35615317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 2e-45; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 56 - 229
Target Start/End: Original strand, 6464219 - 6464391
Alignment:
Q  56 aaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttt 155  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||   ||||||||||||||| |        ||||||||||| |||| ||||    
T  6464219 aaaataaatacacacgtggcgtccacgtcagctttgacttggtcaaaattggcctgaggggccaaaactgcaaaaaag-tcaatacttagggggcggttt 6464317  T
Q  156 tgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||||||||||||||||  ||||||||||||||||||| |||| ||||||||||||||| ||||||| ||||    
T  6464318 tgtagtttatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagccta 6464391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 229
Target Start/End: Original strand, 20126594 - 20126736
Alignment:
Q  89 ttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgca 188  Q
    ||||||||||||||||||   ||||||||||||||| |        ||||||||||| |||| |||||||||||||||||||||||  | ||||||||||    
T  20126594 ttgacttggtcaaaattggtctgaggggccaaaactgcaaaaaaaatcaatacttagggggcggttttgtagtttatttagttagggggtcaaaatcgca 20126693  T
Q  189 acttcttaaaactta--gggggccaaaactactattaaaccta 229  Q
    |||||||||||| ||  ||||||||||||| ||||||| ||||    
T  20126694 acttcttaaaacatagggggggccaaaactcctattaagccta 20126736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 36361201 - 36361031
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagtttt 156  Q
    ||||||||||| | |||||||||| |||||||||||||||||||||||||  ||| |||||||||||| |        ||||||||||| |||| |||||    
T  36361201 aaataaatacatatgtggcgtccacgtcagctttgacttggtcaaaattggcatg-ggggccaaaactgcaaaaaag-tcaatacttagggggcggtttt 36361104  T
Q  157 gtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||| ||||||||||||||    ||||||||||||||||| |||| |||||| |||||||| | ||||| ||||    
T  36361103 gtactttatttagttaggggatcaaaatcgcaacttcttgaaacataggggaccaaaactgcaattaagccta 36361031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 20126530 - 20126434
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctatt 231  Q
    ||||||||||| |||| |||||||||||||||||||||||  | ||||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||    
T  20126530 tcaatacttagggggcggttttgtagtttatttagttagggggtcaaaatcacaacttcttgaaacatagggggccaaaactcctattaagcctatt 20126434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 7611315 - 7611483
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagtttt 156  Q
    |||||||||||||||||||||||||||  || ||||||| ||||||||||   ||   |||||||||| |        ||||||||||| | ||||| ||    
T  7611315 aaataaatacacacgtggcgtccatgtgtgcattgactttgtcaaaattggtctg---ggccaaaactgcaaaaaag-tcaatacttagggagcagtgtt 7611410  T
Q  157 gtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
     ||||||||||||||| |  |||||||| ||||||| ||||||| ||||||| ||||||||| ||||||||||    
T  7611411 atagtttatttagttaaggggccaaaattgcaactttttaaaacatagggggtcaaaactacaattaaaccta 7611483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 7899604 - 7899654
Alignment:
Q  56 aaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattg 106  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7899604 aaaataaatacacacgtggcgtccaagtcagctttgacttggtcaaaattg 7899654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 7611242 - 7611095
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagtttt 156  Q
    |||||| |||| | ||||||||||  |||||||||||| |||| ||||||| ||| |||||||||||| |        ||||||||||| |||| |||||    
T  7611242 aaataagtacatatgtggcgtccacatcagctttgactcggtcgaaattgacatggggggccaaaacttcaaaagaa-tcaatacttag-gggcggtttt 7611145  T
Q  157 gtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttaggg 206  Q
    ||||||||||||  || |  |||||||||||||||||||||||| |||||    
T  7611144 gtagtttatttaactaaggggccaaaatcgcaacttcttaaaacataggg 7611095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 36361383 - 36361463
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaac 215  Q
    ||||||||||   ||| ||||||||||||||||||||| |  |||||||||||||||||||||||  ||||||||||||||    
T  36361383 tcaatacttaagaggcggttttgtagtttatttagttaaggggccaaaatcgcaacttcttaaaatatagggggccaaaac 36361463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 28769804 - 28769716
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaa 225  Q
    ||||||||||||||| |||||||| ||||||| |||||| |||||||||||||| || ||||||  || | |||||||||| ||||||||    
T  28769804 caatacttagagggcggttttgtattttattttgttagggagccaaaatcgcaattttttaaaatata-gtggccaaaactgctattaaa 28769716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 26366048 - 26366125
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| |||||||| |||||||| |||| |||||||||  ||||||||| ||||||||| |||| |||||||||||||    
T  26366048 caatacatagagggctgttttgtattttaattagttaggg-gccaaaatcacaacttcttgaaacatagggggccaaaa 26366125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 42586048 - 42585982
Alignment:
Q  165 tttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctatt 231  Q
    ||||||||||  | ||||||||||||||||| |||| ||||||||||||||| ||||||| ||||||    
T  42586048 tttagttagggggtcaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagcctatt 42585982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 6464108 - 6463983
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagtttt 156  Q
    |||||||||||||| ||||||||||||  || ||||||||||||||||||    | |||| ||||||| |        ||||||||||| |||| |||||    
T  6464108 aaataaatacacacatggcgtccatgtgtgcattgacttggtcaaaattggccaggggggacaaaactgc-aaaaaagtcaatacttagggggcggtttt 6464010  T
Q  157 gtagtttatttagttaggaagccaaaa 183  Q
    ||||||||||||||||||  |||||||    
T  6464009 gtagtttatttagttagggggccaaaa 6463983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 34969050 - 34969091
Alignment:
Q  64 tacacacgtggcgtccatgtcagctttgacttggtcaaaatt 105  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  34969050 tacacacgtggcgtccacgtcagctttgacttggtcaaaatt 34969091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 34969120 - 34969200
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    |||||||||| |||| |||||||| | ||||| |||| |   ||||||||||||||||||||||| ||| |||||||||||    
T  34969120 caatacttagggggcggttttgtattatattttgttatgggtccaaaatcgcaacttcttaaaacatagagggccaaaact 34969200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 38163654 - 38163730
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    |||||||| |||| |||||||||  |||||||||||||||||||||||  |||| |||||||| | | |||||||||    
T  38163654 gttttgtattttaattagttagggggccaaaatcgcaacttcttaaaatataggaggccaaaagtgcaattaaacct 38163730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 227
Target Start/End: Original strand, 13428031 - 13428191
Alignment:
Q  64 tacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttttgtagttt 163  Q
    |||| ||||||||| ||||||||||||||||||||||||||||   || | ||||||||||||         |||||||||  ||   |||||||| |||    
T  13428031 tacatacgtggcgttcatgtcagctttgacttggtcaaaattggtttg-gaggccaaaactacaaaagggg-caatacttaagggatggttttgtatttt 13428128  T
Q  164 atttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacc 227  Q
    | || ||||||  | |||||| ||||||||||||||  ||||||||||||||| ||||||||||    
T  13428129 actttgttagg-ggtcaaaattgcaacttcttaaaatatagggggccaaaactgctattaaacc 13428191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 26702647 - 26702722
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactatt 222  Q
    ||||||||||||||||| |||  ||| | |||||||||||||||||| ||||| ||||||| | |||| |||||||    
T  26702647 gggcagttttgtagttttttttcttaaggagccaaaatcgcaacttcgtaaaagttaggggacaaaaattactatt 26702722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 26972380 - 26972455
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactatt 222  Q
    ||||||||||||||||| |||  ||| | |||||||||||||||||| ||||| ||||||| | |||| |||||||    
T  26972380 gggcagttttgtagttttttttcttaaggagccaaaatcgcaacttcgtaaaagttaggggacaaaaattactatt 26972455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 38162684 - 38162606
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| |||||||||   |||||||| ||||||||| |||| |||||||||||||    
T  38162684 caatacatagggggctgttttgtattttaattagttaggggtccaaaatcacaacttcttgaaacatagggggccaaaa 38162606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 7899468 - 7899420
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaa 183  Q
    |||||||||||||||| ||||||||||||| |||||||||  |||||||    
T  7899468 tcaatacttagagggcggttttgtagtttacttagttagggggccaaaa 7899420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 227
Target Start/End: Complemental strand, 42169255 - 42169084
Alignment:
Q  56 aaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttt 155  Q
    |||| |||||||||||||  |||||||||| || |||||||||||| ||||   || |||||||||||| |         |||||||||| ||||| |||    
T  42169255 aaaaaaaatacacacgtgatgtccatgtcaactctgacttggtcaacattggtttggggggccaaaactgcaaaagggg-caatacttagggggcaattt 42169157  T
Q  156 tgtagttta-tttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacc 227  Q
    | || |||| ||| | ||||    |||||| |||||||  ||| |||||||||||||||||||||||||||||    
T  42169156 tatattttatttttgctaggggttcaaaattgcaactttctaatacttagggggccaaaactactattaaacc 42169084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 42586339 - 42586398
Alignment:
Q  165 tttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||||||  ||||||||||||||||||  |||| | ||||||||||||| |||||||    
T  42586339 tttagttagggggccaaaatcgcaacttctgtaaacatggggggccaaaactgctattaa 42586398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 43355810 - 43355719
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaac 226  Q
    ||||||||||| |||  ||||||||||||||||| ||||     ||||||||||||||||| |||  |||| || ||||||| |||||||||    
T  43355810 tcaatacttagggggtggttttgtagtttatttatttagaggatcaaaatcgcaacttcttgaaatataggaggtcaaaactgctattaaac 43355719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 4146198 - 4146120
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| |||||||||   ||||||||||||||| | ||||  |||||||||||||    
T  4146198 caatacatagggggctgttttgtattttaattagttaggggtccaaaatcgcaacttttgaaaagatagggggccaaaa 4146120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 3999134 - 3999085
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    ||||||||||||||| | ||| ||||||||| |||||| |||||||||||    
T  3999134 caaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaaacct 3999085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 24405565 - 24405484
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctattat 233  Q
    |||||||||||| |||  | ||| || ||||||||||||||   |||| ||||||| | |||||| ||||||||||||||||    
T  24405565 gttttgtagttttttttctcagggagtcaaaatcgcaactttgaaaaagttaggggactaaaactgctattaaacctattat 24405484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 25693981 - 25693904
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||| |||||||| |||| ||||||||   |||||||||||||||| | ||||  ||||||||||||| ||| |||||    
T  25693981 gggctgttttgtattttaattagttagagggccaaaatcgcaacttttgaaaagatagggggccaaaagtacaattaa 25693904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 37897951 - 37898028
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||| |||||||||||| |||  |||||  ||||||||||||||||   |||| ||||||||| |||||| |||||||    
T  37897951 gggcggttttgtagttttttttcttagggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaa 37898028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 43098076 - 43098027
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    ||||||||||||||| ||||| ||||||| | |||||| |||||||||||    
T  43098076 caaaatcgcaacttcgtaaaagttaggggacgaaaactgctattaaacct 43098027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 2974898 - 2974950
Alignment:
Q  177 gccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||||||||||||||| | ||| ||||||||| |||||| ||||||| ||||    
T  2974898 gccaaaatcgcaacttcgtgaaagttagggggcaaaaactgctattaagccta 2974950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 3333940 - 3334012
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||||||| | |  |||||  ||||||||||||||||   |||| ||||||||| ||||||||||||||    
T  3333940 gttttgtagtttttcttcttagggggccaaaatcgcaactttggaaaagttagggggctaaaactactattaa 3334012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 10169090 - 10169014
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    |||||||| |||| |||||||||   ||||||||||||||| | ||||  ||||||||||||| | | |||||||||    
T  10169090 gttttgtattttaattagttaggggaccaaaatcgcaacttttaaaaagatagggggccaaaagtgcaattaaacct 10169014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 17235211 - 17235139
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||| |||| ||| ||||| ||| ||||||||||||| | ||||  ||||||||||||| ||| |||||    
T  17235211 gttttgtattttagttaattagggagctaaaatcgcaacttttgaaaagatagggggccaaaagtacaattaa 17235139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 20364748 - 20364680
Alignment:
Q  161 tttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||||| ||||||  | ||||||||||||||| | | |||||||||| ||||||| ||||||| ||||    
T  20364748 tttattttgttagggggtcaaaatcgcaacttcctgatacttagggggacaaaactgctattaagccta 20364680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 33087738 - 33087678
Alignment:
Q  64 tacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaact 124  Q
    ||||||||||||||||| || ||| ||||||| |||||||||||   | ||||||||||||    
T  33087738 tacacacgtggcgtccacgttagcattgactttgtcaaaattgatccggggggccaaaact 33087678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 38974911 - 38974971
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggg 207  Q
    |||| |||||||| |||| |||||||||   ||||| ||||||||||||||||| ||||||    
T  38974911 gggctgttttgtattttaattagttaggggtccaaattcgcaacttcttaaaacatagggg 38974971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 41138447 - 41138387
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttctt 195  Q
    ||||||||||| | ||  |||| |||||||||||||||||| || ||||||| ||||||||    
T  41138447 tcaatacttagggagcgattttttagtttatttagttaggaggctaaaatcgtaacttctt 41138387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 4e-38; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 57 - 214
Target Start/End: Original strand, 45163606 - 45163761
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagtttt 156  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||| ||| |||||||||||| |        ||||||||||| |||| |||||    
T  45163606 aaataaatacatacgtggcgtccacgtcagctttgacttggtcaaaattgacatg-ggggccaaaactgcaaaaaag-tcaatacttagggggcggtttt 45163703  T
Q  157 gtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    ||||||||||||||||||  ||||||||||||||||||| |||| |||||||||||||    
T  45163704 gtagtttatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaa 45163761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 56 - 209
Target Start/End: Original strand, 1003690 - 1003841
Alignment:
Q  56 aaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttt 155  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||  || |||||||| ||| |        ||||||||||| || |  |||    
T  1003690 aaaataaatacacacgtggcgtccacgtcagctttgacttggtcaaaattgacttg-ggggccaatactgc-aaaaaagtcaatacttaggggacgattt 1003787  T
Q  156 tgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggc 209  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||| ||||||||    
T  1003788 tgtagtttatttagttagggagccaaaattgcaacttcttgaaacatagggggc 1003841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 216
Target Start/End: Complemental strand, 17512266 - 17512108
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagtttt 156  Q
    ||||||||||| |  ||| ||||| |||| ||||||||||||||||||||| ||| |||||||||||| |        ||||||||||| ||||  ||||    
T  17512266 aaataaatacatatatggagtccacgtcaactttgacttggtcaaaattgacatggggggccaaaactgcaaaaaag-tcaatacttagggggcgttttt 17512168  T
Q  157 gtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    ||||||||||||||||||  ||||||||||||||||||| |||  |||||||||||||||    
T  17512167 gtagtttatttagttagggggccaaaatcgcaacttcttgaaatatagggggccaaaact 17512108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 14170592 - 14170433
Alignment:
Q  56 aaaataaatacacacgtg--gcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagt 153  Q
    |||||||||||| |||||  ||||||| |||||||||||||||||||||||||  |||  ||||||||||| |        |||||||||||  ||| ||    
T  14170592 aaaataaatacatacgtgtggcgtccacgtcagctttgacttggtcaaaattggcatg--gggccaaaactgcgaaaaag-tcaatacttagcaggcggt 14170496  T
Q  154 tttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||| ||||||| |||||||    
T  14170495 tttgtagtttatttaattagggggccaaaatcgcaacttcttaaaacatagggggtcaaaact 14170433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 216
Target Start/End: Original strand, 35795477 - 35795634
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagtttt 156  Q
    |||||||||||||||||||||||||||  || ||||||| ||||||||||  ||| ||||||||||||          ||||||||||| | || |||||    
T  35795477 aaataaatacacacgtggcgtccatgtgtgcattgactttgtcaaaattggtatg-ggggccaaaactg-taaaaaagtcaatacttagggtgcggtttt 35795574  T
Q  157 gtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    ||||||||||||||||||  ||||||||| ||||||||| |||| |||||||||||||||    
T  35795575 gtagtttatttagttagggggccaaaatcacaacttcttgaaacatagggggccaaaact 35795634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 137 - 228
Target Start/End: Complemental strand, 27225870 - 27225780
Alignment:
Q  137 aatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    |||||||| ||||| ||||||||||||||||||||||| | | ||||||||||||||||||||| ||||||| ||||||| | |||||||||    
T  27225870 aatacttaaagggcggttttgtagtttatttagttagggatc-aaaatcgcaacttcttaaaacatagggggtcaaaactgcaattaaacct 27225780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 12278926 - 12278838
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||| ||| |||| |||||||| |||| ||||||||| | ||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  12278926 caatacatagggggctgttttgtattttaattagttagggatccaaaatcgcaacttcttaaaacatagggggccaaaagtacaattaa 12278838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 23475792 - 23475635
Alignment:
Q  58 aataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttttg 157  Q
    |||||||||||| |||||||||||||  || ||||||| ||||||||||   || | || ||||||| |        ||||||||||| |||| ||||||    
T  23475792 aataaatacacatgtggcgtccatgtgtgcattgactttgtcaaaattggtctg-gaggtcaaaactgcaaaaaaagtcaatacttagggggcggttttg 23475694  T
Q  158 tagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    ||||||||||||||| |  | ||||||| ||||||||| |||| |||||||||||||||    
T  23475693 tagtttatttagttaaggggtcaaaatcacaacttcttgaaacatagggggccaaaact 23475635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 229
Target Start/End: Original strand, 45522414 - 45522507
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||||||| |||| |||||||| ||||||| ||||||  || ||||||||||||||||||||| ||||||| ||||||| || |||| ||||    
T  45522414 caatacttagggggcggttttgtattttattttgttagggggctaaaatcgcaacttcttaaaacatagggggtcaaaactgcttttaagccta 45522507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 1003550 - 1003458
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacc 227  Q
    |||||| |||| ||||| |||||||| ||||||||||| |  |||||||||||||||||||||||  |||| |||||||||| ||||| ||||    
T  1003550 tcaatatttagggggcaattttgtagcttatttagttatggggccaaaatcgcaacttcttaaaatataggaggccaaaactgctattgaacc 1003458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 35795307 - 35795228
Alignment:
Q  137 aatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    ||||||||| |||| |||||||||||||||||| ||||  | |||||| ||||||| || |||| |||||||||||||||    
T  35795307 aatacttagggggcggttttgtagtttatttagctagggggtcaaaattgcaactttttgaaacatagggggccaaaact 35795228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 5916879 - 5916957
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| |||||||||  || ||||||||||||||||||||| ||| |||||||||    
T  5916879 caatacatagggggctgttttgtattttaattagttagggggcaaaaatcgcaacttcttaaaacatagagggccaaaa 5916957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 23936354 - 23936292
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| |||||||||  ||||||||||||||||||| |||| |||||||||||||    
T  23936354 gttttgtattttaattagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaa 23936292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 29340853 - 29340767
Alignment:
Q  142 ttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    |||| |||| |||||||| ||||||| |||| |  ||||||||||||| || || |||| ||||||||||||||| |||||||||||    
T  29340853 ttagggggcggttttgtattttattttgttaaggggccaaaatcgcaaattatttaaacatagggggccaaaactgctattaaacct 29340767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 41602845 - 41602927
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||| |||||||||||| |||  |||||| || ||||||||||||| || ||||||||||||| |||||| ||||||| ||||    
T  41602845 gggcggttttgtagttttttttcttaggaggctaaaatcgcaactttttgaaacttagggggctaaaactgctattaagccta 41602927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 756121 - 756174
Alignment:
Q  177 gccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctat 230  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||| |||||    
T  756121 gccaaaatcgcaacttcttaaaacatagggagccaaaactgctattaagcctat 756174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 229
Target Start/End: Original strand, 29196515 - 29196678
Alignment:
Q  64 tacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttttgtagttt 163  Q
    ||||||||||||||||| |||||||||||||| |||||||||||   | |||| ||||||| |         |||||||||| || ||  |||||| |||    
T  29196515 tacacacgtggcgtccaggtcagctttgacttagtcaaaattgatcag-ggggtcaaaactgcaaaaggga-caatacttaggggtcaactttgtatttt 29196612  T
Q  164 atttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||| |||||    ||| ||||||||||||||||||  |||||||||||||||  |||||||||||    
T  29196613 attttgttagaggaccataatcgcaacttcttaaaatatagggggccaaaactgttattaaaccta 29196678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 8409788 - 8409852
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaac 200  Q
    |||||||||| |||| |||||||| ||||||| ||||||   |||||||||||||||||||||||    
T  8409788 caatacttagggggcggttttgtattttattttgttaggggcccaaaatcgcaacttcttaaaac 8409852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 14170659 - 14170751
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacc 227  Q
    ||||||||||| |||   |||||||||||||||| ||||   || |||||| ||||||||| |||  ||||||||||||||||| ||||||||    
T  14170659 tcaatacttagggggtgattttgtagtttatttaattagagggctaaaatctcaacttcttgaaatatagggggccaaaactacaattaaacc 14170751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 755965 - 755906
Alignment:
Q  165 tttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||||||  ||||||||||||||||||| |||| ||| ||||||||||| |||||||    
T  755965 tttagttagggggccaaaatcgcaacttcttgaaacatagagggccaaaactgctattaa 755906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 2802697 - 2802646
Alignment:
Q  178 ccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||||||||||||||||| || ||||||| ||||||| ||||||||||||    
T  2802697 ccaaaatcgcaacttcttaatacatagggggtcaaaactgctattaaaccta 2802646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 25897070 - 25896991
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaac 226  Q
    |||| |||||||||||| ||| ||||||  ||||||||||||||||   |||| ||||||||| |||||| |||||||||    
T  25897070 gggcggttttgtagttttttttgttagggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaaac 25896991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 34539249 - 34539184
Alignment:
Q  161 tttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacc 227  Q
    ||||||||||||||  | |||||||||||||||| ||||| ||||| ||| ||||||||||||||||    
T  34539249 tttatttagttaggg-gtcaaaatcgcaacttctgaaaacatagggagcctaaactactattaaacc 34539184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 107
Target Start/End: Complemental strand, 34539329 - 34539287
Alignment:
Q  65 acacacgtggcgtccatgtcagctttgacttggtcaaaattga 107  Q
    ||||||||||||| || ||||||||||||||||||||||||||    
T  34539329 acacacgtggcgttcacgtcagctttgacttggtcaaaattga 34539287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 45163549 - 45163499
Alignment:
Q  56 aaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattg 106  Q
    ||||||||||||||||||||||||||||  || ||||||| ||||||||||    
T  45163549 aaaataaatacacacgtggcgtccatgtgtgcattgactttgtcaaaattg 45163499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 45308545 - 45308467
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| |||||||||    ||||||||||||||||| |||| |||||||||||||    
T  45308545 caatacatagggggctgttttgtattttaattagttaggggttcaaaatcgcaacttcttgaaacatagggggccaaaa 45308467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 6041463 - 6041512
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    ||||||||||||||||  |||| ||||||||||||| |||||||||||||    
T  6041463 caaaatcgcaacttctataaacatagggggccaaaaatactattaaacct 6041512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 6045100 - 6045149
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    ||||||||||||||||  |||| ||||||||||||| |||||||||||||    
T  6045100 caaaatcgcaacttctataaacatagggggccaaaaatactattaaacct 6045149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 9499223 - 9499268
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||||||||||| ||| |||||||||||||||||| |||||||    
T  9499223 caaaatcgcaacttcgtaatacttagggggccaaaactgctattaa 9499268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 42217865 - 42217812
Alignment:
Q  177 gccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctat 230  Q
    |||||||||||||||||||||||||||  | || |||||| |||||||||||||    
T  42217865 gccaaaatcgcaacttcttaaaacttaaagagctaaaactgctattaaacctat 42217812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 18092985 - 18092914
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||||||| |||  ||| || |||||||||||||||||||  |||||||||||| |||||| |||||||    
T  18092985 gttttgtagtttttttc-ttacgaggccaaaatcgcaacttcttgtaacttagggggctaaaactgctattaa 18092914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 29219234 - 29219178
Alignment:
Q  68 cacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaact 124  Q
    ||||||||||||| |||||| ||||||||||||||||||   || ||||||||||||    
T  29219234 cacgtggcgtccacgtcagcattgacttggtcaaaattggcttggggggccaaaact 29219178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 8347631 - 8347564
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||| |||||||| |||| |||||||||   |||||||| |||||||||||||| |||| ||||||||    
T  8347631 gggctgttttgtattttaattagttaggggtccaaaatcacaacttcttaaaacataggaggccaaaa 8347564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 102
Target Start/End: Original strand, 8409734 - 8409772
Alignment:
Q  64 tacacacgtggcgtccatgtcagctttgacttggtcaaa 102  Q
    ||||||| |||||||||||||||||||||||| ||||||    
T  8409734 tacacacatggcgtccatgtcagctttgactttgtcaaa 8409772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Original strand, 17512357 - 17512407
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattga 107  Q
    |||||||||||||||||||||||||||  || |||| || |||||||||||    
T  17512357 aaataaatacacacgtggcgtccatgtgtgcattgagtttgtcaaaattga 17512407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 26889544 - 26889585
Alignment:
Q  64 tacacacgtggcgtccatgtcagctttgacttggtcaaaattg 106  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  26889544 tacacacgtggcg-ccatgtcagcattgacttggtcaaaattg 26889585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 31947929 - 31947867
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| |||||||||  |||||||||||||||| | ||||  |||||||||||||    
T  31947929 gttttgtattttaattagttagggggccaaaatcgcaacttttgaaaagatagggggccaaaa 31947867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 228
Target Start/End: Complemental strand, 37263415 - 37263357
Alignment:
Q  170 ttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    ||||| || ||||||||||||||| ||||| ||| ||||| |||||| |||||||||||    
T  37263415 ttagggagtcaaaatcgcaacttcgtaaaagttaaggggcgaaaactgctattaaacct 37263357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 44807297 - 44807375
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| |||||||||  |||||||||||||||| | ||||  ||||||| |||||    
T  44807297 caatacatagggggctgttttgtattttaattagttagggggccaaaatcgcaacttttgaaaagatagggggtcaaaa 44807375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 5899434 - 5899475
Alignment:
Q  65 acacacgtggcgtccatgtcagctttgacttggtcaaaattg 106  Q
    ||||| ||||||||||||||| | ||||||||||||||||||    
T  5899434 acacatgtggcgtccatgtcaacattgacttggtcaaaattg 5899475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 18650981 - 18650944
Alignment:
Q  177 gccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  18650981 gccaaaatcgcaacttcttgaaacatagggggccaaaa 18650944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 32498467 - 32498391
Alignment:
Q  137 aatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    ||||| ||| |||| |||||||| |||| |||||||||  |||||||||||||||| | ||||  |||||||||||||    
T  32498467 aatacatagggggctgttttgtattttaattagttaggg-gccaaaatcgcaacttttgaaaagatagggggccaaaa 32498391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 12280340 - 12280388
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaac 200  Q
    |||||||| |||| ||| |||||  ||||||||||||||||||||||||    
T  12280340 gttttgtattttaattaattagggggccaaaatcgcaacttcttaaaac 12280388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 18621796 - 18621756
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaactt 192  Q
    |||||||| |||| ||||||||| |||||||||||||||||    
T  18621796 gttttgtattttaattagttagggagccaaaatcgcaactt 18621756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 42075198 - 42075262
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaa 199  Q
    ||||||| |||||||| |||||||| |||| ||||||| |   | ||||||||||||||||||||    
T  42075198 tcaatacatagagggctgttttgtattttaattagttaagggactaaaatcgcaacttcttaaaa 42075262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 9e-36; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 56 - 224
Target Start/End: Original strand, 17850377 - 17850545
Alignment:
Q  56 aaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttt 155  Q
    |||||| ||||||||||||||||||  |  || ||||||||||||||||||   || ||||||||||||          ||||||||| | ||||| |||    
T  17850377 aaaatacatacacacgtggcgtccacatgtgcattgacttggtcaaaattgccctggggggccaaaactgtaaaaaaagtcaatactttgggggcaattt 17850476  T
Q  156 tgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  17850477 tgtagtttatttagttaggaggccaaaatcgcaacttcttaaaacatagggggccaaaactactattaa 17850545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 56 - 236
Target Start/End: Original strand, 14815938 - 14816120
Alignment:
Q  56 aaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnn---tcaatacttagagggcag 152  Q
    |||||||||| ||||||||| |||| || |||||||||||||||||||||||  || |||||||||||| |           ||||||||||| |||| |    
T  14815938 aaaataaatatacacgtggcatccacgtaagctttgacttggtcaaaattgacctg-ggggccaaaactgcaaaaaaaaaaatcaatacttagggggcgg 14816036  T
Q  153 ttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctattattat 236  Q
    ||||||||||||||||||||||  ||||||||||||||||||| |||| ||||||||||||||| ||||||| |||||| ||||    
T  14816037 ttttgtagtttatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagcctatttttat 14816120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 230
Target Start/End: Complemental strand, 8740322 - 8740151
Alignment:
Q  56 aaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttt 155  Q
    |||| |||||||||||||||||| | |||||||||||||||||||||||||  |||  ||||||||||| |        ||||||||||| |||||||||    
T  8740322 aaaaaaaatacacacgtggcgtcgacgtcagctttgacttggtcaaaattggcatg--gggccaaaactgcaaaaaag-tcaatacttagggggcagttt 8740226  T
Q  156 tgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctat 230  Q
    | || |||||||||||||   | |||||||||||||||||||||  |||||||  |||||| | ||||| |||||    
T  8740225 tataatttatttagttagagggtcaaaatcgcaacttcttaaaatatagggggttaaaactgcaattaagcctat 8740151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 224
Target Start/End: Complemental strand, 14815866 - 14815701
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagtttt 156  Q
    ||||||||||||||||||||||||  |  || ||||||||||||||||||  ||| ||||||||| || |        ||||||||||| |||| |||||    
T  14815866 aaataaatacacacgtggcgtccacatgtgcattgacttggtcaaaattggcatg-ggggccaaagctgcaataaag-tcaatacttagggggcggtttt 14815769  T
Q  157 gtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||||||||||| |   |||||| ||||||||||| |||| ||||||||||||||| |||||||    
T  14815768 gtagtttatttagttaagggaccaaaaccgcaacttcttgaaacatagggggccaaaactgctattaa 14815701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 226
Target Start/End: Original strand, 8740333 - 8740500
Alignment:
Q  56 aaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttt 155  Q
    |||||||||||||| |||||||||||||  || ||||||| |||||||||||  |  |||||||||||| |        |||||||||| ||||| ||||    
T  8740333 aaaataaatacacaggtggcgtccatgtgtgcattgactttgtcaaaattgatctagggggccaaaactgcaaaaaag-tcaatactta-agggcggttt 8740430  T
Q  156 tgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaac 226  Q
    ||||||||||||||||| |  | ||||||||||||||||| |||| || |||||||||||| | |||||||    
T  8740431 tgtagtttatttagttaaggggtcaaaatcgcaacttcttgaaacata-ggggccaaaactgcaattaaac 8740500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 12802443 - 12802524
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctattat 233  Q
    |||||||||||||||||||||| |  |||||||||||||||||| |||| ||||| ||||||||| ||||||| ||| ||||    
T  12802443 gttttgtagtttatttagttagaagaccaaaatcgcaacttcttgaaacatagggagccaaaactgctattaagccttttat 12802524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 229
Target Start/End: Original strand, 35500314 - 35500407
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||||||  |||| |||||||| ||||||| ||||||  ||||||||||||||||||| |||| |||||  |||||||||||||||| ||||    
T  35500314 caatacttaaggggcggttttgtattttattttgttagggggccaaaatcgcaacttcttgaaacatagggccccaaaactactattaagccta 35500407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 229
Target Start/End: Original strand, 4423680 - 4423835
Alignment:
Q  73 ggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttttgtagtttatttagtta 172  Q
    |||||||| ||||||||||||| |||||||||||  ||| |||||||||| | |        ||||||||||  |||| |||||||||||||||||||||    
T  4423680 ggcgtccacgtcagctttgactaggtcaaaattggcatggggggccaaaattgcaaaaaaa-tcaatacttaaggggcggttttgtagtttatttagtta 4423778  T
Q  173 ggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
     |  | |||||||||||||| ||||||| ||||| |  |||||| | ||||||||||    
T  4423779 tggggtcaaaatcgcaactttttaaaacatagggagttaaaactgcaattaaaccta 4423835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 216
Target Start/End: Original strand, 9780832 - 9780988
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagtttt 156  Q
    ||||||||||||| |||||||||||||  || ||||||| ||||||||||  |||  ||| ||||||| |        ||||||||||| |||| |||||    
T  9780832 aaataaatacacaagtggcgtccatgtgtgcattgactttgtcaaaattggtatg--gggtcaaaactgcaaaaaag-tcaatacttagggggcggtttt 9780928  T
Q  157 gtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    |||||||||||||||||     |||||||||||||| ||||||| || ||||||||||||    
T  9780929 gtagtttatttagttagaggatcaaaatcgcaactttttaaaacataaggggccaaaact 9780988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 29370796 - 29370717
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaac 226  Q
    ||||||||||||| ||||||| || |||    |||||||||||||||||||||| ||||||||||||||| |||||||||    
T  29370796 gggcagttttgtattttattttgtcaggggatcaaaatcgcaacttcttaaaacatagggggccaaaacttctattaaac 29370717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 11363957 - 11363895
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| ||||||||| |||||||||||||||||||| |||| |||||||||||||    
T  11363957 gttttgtattttaattagttagggagccaaaatcgcaacttcttgaaacatagggggccaaaa 11363895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 23993901 - 23993975
Alignment:
Q  155 ttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||| ||||||| ||||||  |||||||| |||||||||||| |||||||| ||||||||| ||||||||||||    
T  23993901 ttgtattttattttgttagggggccaaaattgcaacttcttaatacttagggagccaaaactgctattaaaccta 23993975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 28719408 - 28719330
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| ||||  ||||||| |||| |||||||||  |||||||||||||||||||||||| |||||||||||||    
T  28719408 caatacatagggggctattttgtattttaattagttagggggccaaaatcgcaacttcttaaaacatagggggccaaaa 28719330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 44078523 - 44078605
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||| |||| ||| |||| ||||||||| | ||||||||||||||||||||||| ||||||||||||| | | ||||||||||    
T  44078523 gggctgtttggtattttaattagttagggaaccaaaatcgcaacttcttaaaacatagggggccaaaagtgcaattaaaccta 44078605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 52278 - 52340
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| |||||||||  ||||||||||||| |||||||||| |||||||||||||    
T  52278 gttttgtattttaattagttagggggccaaaatcgcaaattcttaaaacatagggggccaaaa 52340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 200
Target Start/End: Complemental strand, 4423589 - 4423448
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagtttt 156  Q
    ||||||||||||||||||||| |||||| || ||||||| ||||||||||   |  |||||||||||| |        ||||||||||| ||||  ||||    
T  4423589 aaataaatacacacgtggcgttcatgtctgcattgactttgtcaaaattggcctc-ggggccaaaactgcaaaaaaa-tcaatacttagggggcgatttt 4423492  T
Q  157 gtagtttatttagttaggaagccaaaatcgcaacttcttaaaac 200  Q
    ||||||||||| ||||    ||||||||||||||||||||||||    
T  4423491 gtagtttattttgttaaagggccaaaatcgcaacttcttaaaac 4423448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 12948937 - 12948887
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  12948937 caaaatcgcaacttcttaaaatttagggggctaaaactgctattaaaccta 12948887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 14983923 - 14984001
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| |||||||||   ||||||||||||||||||||||| || ||||||||||    
T  14983923 caatacatagggggctgttttgtattttaattagttaggggaccaaaatcgcaacttcttaaaacatacggggccaaaa 14984001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 229
Target Start/End: Original strand, 23686799 - 23686876
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||||| |||| ||| ||||||  ||||||||||||| ||||||||| || |||||||||| ||| ||||||||||    
T  23686799 gttttgtattttaattaattaggagtccaaaatcgcaacatcttaaaacataaggggccaaaagtacaattaaaccta 23686876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 105
Target Start/End: Complemental strand, 3198623 - 3198575
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaatt 105  Q
    |||||||||||||||| ||| |||||||||| |||||||||||||||||    
T  3198623 aaataaatacacacgtagcggccatgtcagcattgacttggtcaaaatt 3198575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 23048370 - 23048303
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||| |||||||| |||| |||||||||  |||||||||||||||||||||||  || ||||||||||    
T  23048370 gggctgttttgtattttaattagttagggggccaaaatcgcaacttcttaaaatataaggggccaaaa 23048303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 20662564 - 20662518
Alignment:
Q  178 ccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||||    
T  20662564 ccaaaatcgcaacttctttaaacttagggggttaaaactactattaa 20662518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 229
Target Start/End: Original strand, 28733222 - 28733299
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||||| |||| ||||||| |  |||||||||||||||| ||||||| |||||| |||||| ||| ||||| ||||    
T  28733222 gttttgtattttaattagttaaggggccaaaatcgcaactttttaaaacataggggaccaaaaatacaattaagccta 28733299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 37431772 - 37431852
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    |||| |||||||||||| |||  |||||| ||||||||||||||||| |  || ||||||||| |||||| |||||||||||    
T  37431772 gggcggttttgtagtttttttc-ttaggaggccaaaatcgcaacttcgtggaagttagggggcgaaaactgctattaaacct 37431852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 21631884 - 21631816
Alignment:
Q  161 tttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||| |||||||||  ||||||||||||||||| | |||| ||||||||||||| | | ||||||||||    
T  21631884 tttaattagttagggggccaaaatcgcaacttcatgaaacatagggggccaaaagtgcaattaaaccta 21631816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 31227111 - 31227203
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    ||||||||| ||||| || ||||| ||||||| |||||   | ||||||||||||||| | | | ||||| |||||||||| |||||||||||    
T  31227111 caatacttaaagggctgtattgtattttattttgttagagggtcaaaatcgcaacttcctgatatttaggaggccaaaactgctattaaacct 31227203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 35500131 - 35500043
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||||| |||| |||||||| ||||||| |||||   | | ||||| |||||| || |||| ||||||||||||||| |||||||    
T  35500131 caatacttagggggcggttttgtattttattttgttagtgggtcgaaatcacaactttttgaaacatagggggccaaaactgctattaa 35500043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 15023301 - 15023223
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| |||||||  |||||||| |||| ||||||||| ||| ||||||||||||| | ||||  ||| |||||||||    
T  15023301 caatacatagagggttgttttgtattttaattagttagggagctaaaatcgcaacttttaaaaagatagagggccaaaa 15023223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 16238203 - 16238125
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| |||||||||  |||||||||||||||| | ||||  |||| ||||||||    
T  16238203 caatacatagggggctgttttgtattttaattagttagggggccaaaatcgcaacttttgaaaaaataggaggccaaaa 16238125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 19889456 - 19889518
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| |||||||||| |||||||||||||||| | ||||  || ||||||||||    
T  19889456 gttttgtattttaattagttaggaggccaaaatcgcaacttttgaaaagatatggggccaaaa 19889518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 21633306 - 21633368
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| |||||||||   ||||| | ||||||||||||||| |||||||||||||    
T  21633306 gttttgtattttaattagttaggggtccaaagttgcaacttcttaaaacatagggggccaaaa 21633368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 29370911 - 29370953
Alignment:
Q  64 tacacacgtggcgtccatgtcagctttgacttggtcaaaattg 106  Q
    ||||||||||||||| | |||||||||||||| ||||||||||    
T  29370911 tacacacgtggcgtctacgtcagctttgactttgtcaaaattg 29370953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 32661657 - 32661735
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| |||||||||  |||||||||||||||| |  |||  |||||||||||||    
T  32661657 caatacatagggggctgttttgtattttaattagttagggggccaaaatcgcaacttttggaaagatagggggccaaaa 32661735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 36286376 - 36286454
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| |||||||||  |||||||||||||||| |  |||  |||||||||||||    
T  36286376 caatacatagggggctgttttgtattttaattagttagggggccaaaatcgcaacttttggaaagatagggggccaaaa 36286454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 43891657 - 43891719
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| ||||||||||  | |||||| ||| |||||||||| |||||||||||||    
T  43891657 gttttgtattttaattagttaggagtctaaaatcacaatttcttaaaacatagggggccaaaa 43891719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 44297648 - 44297561
Alignment:
Q  140 acttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||| ||||||||||||||||| |||  |||||  |||||||||||||||| | |||| ||||| ||| |||| | ||||||| ||||    
T  44297648 acttagggggcagttttgtagttttttt--ttagggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 44297561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 2755189 - 2755250
Alignment:
Q  153 ttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    ||||||| |||| |||||||||  |||||||||||||||| | ||||  |||||||||||||    
T  2755189 ttttgtattttaattagttagggggccaaaatcgcaacttttgaaaagatagggggccaaaa 2755250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 4856757 - 4856712
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||||||||||||| |||| || |||||||||||| |||||||    
T  4856757 caaaatcgcaacttcttgaaacataaggggccaaaactgctattaa 4856712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 11188396 - 11188319
Alignment:
Q  137 aatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    ||||| ||| |||| |||||||| |||| |||||||||  |||||||||||||||| | ||||  ||||||| |||||    
T  11188396 aatacatagggggctgttttgtattttaattagttagggggccaaaatcgcaacttttgaaaagatagggggtcaaaa 11188319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 15023104 - 15023149
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||| ||||||||| ||| |||||||||||||||| |||||||    
T  15023104 caaaatcacaacttcttgaaagttagggggccaaaactgctattaa 15023149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 39672661 - 39672737
Alignment:
Q  153 ttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctat 230  Q
    |||||||||||||||||||| |   |||||||| ||||||||| |||| || |||||||||||| | ||||| |||||    
T  39672661 ttttgtagtttatttagttatgggaccaaaatcacaacttcttgaaacata-ggggccaaaactgcaattaagcctat 39672737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 2609128 - 2609080
Alignment:
Q  177 gccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaa 225  Q
    |||||||||  |||||| ||||| ||||||||| |||||||||||||||    
T  2609128 gccaaaatcaaaacttcgtaaaagttagggggcgaaaactactattaaa 2609080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 3198680 - 3198728
Alignment:
Q  58 aataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattg 106  Q
    ||||| ||| ||||||||| ||| |||||| ||||||||||||||||||    
T  3198680 aataattactcacgtggcggccacgtcagcattgacttggtcaaaattg 3198728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 14489474 - 14489526
Alignment:
Q  177 gccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||||||||||||||| | ||| ||||||||| |||||| ||||||| ||||    
T  14489474 gccaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaagccta 14489526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 20650420 - 20650376
Alignment:
Q  177 gccaaaatcgcaacttcttaaaacttagggggccaaaactactat 221  Q
    ||||||||| ||||||||| ||||||||||||| |||||| ||||    
T  20650420 gccaaaatctcaacttcttgaaacttagggggctaaaactgctat 20650376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 36177354 - 36177410
Alignment:
Q  177 gccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctattat 233  Q
    ||||||||||||||||||| ||||||| ||||| ||||||  |||||| ||| ||||    
T  36177354 gccaaaatcgcaacttcttgaaacttaaggggctaaaactgttattaagccttttat 36177410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 43890175 - 43890099
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    |||||||| |||| ||||||| |   |||||||||||||||||| |||| |||||| |||||| | | |||||||||    
T  43890175 gttttgtattttaattagttaagggaccaaaatcgcaacttcttcaaacataggggaccaaaagtgcaattaaacct 43890099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 8e-33; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 53255132 - 53254974
Alignment:
Q  56 aaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttt 155  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||   ||||| ||||||||| |        ||||||||||| |||| ||||    
T  53255132 aaaataaatacacatgtggcgtccacgtcagctttgacttggtcaaaattggcctgaggagccaaaactgcaaaaaag-tcaatacttag-gggcggttt 53255035  T
Q  156 tgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    ||||||||||||||||||   ||||||||||||||||||| |||| |||||||||||||||    
T  53255034 tgtagtttatttagttagagggccaaaatcgcaacttcttgaaacatagggggccaaaact 53254974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 135 - 230
Target Start/End: Original strand, 53255246 - 53255341
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctat 230  Q
    |||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||| ||||||| |||||    
T  53255246 tcaatacttagagggcggttttgtagtttatttagttagggggccaaaatcgcaacttcttaaaacataggaggccaaaactgctattaagcctat 53255341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 32831252 - 32831163
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||||||||||||||| || ||||||||||||||| ||||||||||| | |||||||| |||| ||||||||||||||| |||||||    
T  32831252 tcaatacttagagggcagtattttagtttatttagttaagaagccaaaattgtaacttcttgaaacatagggggccaaaactgctattaa 32831163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 216
Target Start/End: Original strand, 37755084 - 37755240
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagtttt 156  Q
    ||||||||||| ||||| |||||| |||||||||||||||||||||||||  |||  ||||||||||| |        | ||||||||  |||| |||||    
T  37755084 aaataaatacatacgtgacgtccacgtcagctttgacttggtcaaaattggcatg--gggccaaaactgcaaaaaagtt-aatacttaaggggcggtttt 37755180  T
Q  157 gtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
     |||||||||||||||||  || |||||||||||||| | |||| |||||||||||||||    
T  37755181 atagtttatttagttagggggctaaaatcgcaacttcatgaaacatagggggccaaaact 37755240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 61 - 224
Target Start/End: Complemental strand, 51453706 - 51453545
Alignment:
Q  61 aaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttttgtag 160  Q
    |||||||||||||||||||| ||  || ||||||| |||||||||||  || | |||||||||| |        |||||||||||  ||| |||||||||    
T  51453706 aaatacacacgtggcgtccacgtgtgcattgactttgtcaaaattgacctgggaggccaaaactgcaaaaaag-tcaatacttaggaggcggttttgtag 51453608  T
Q  161 tttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||||||||||  | |||||||||||||||||||||| || |||| ||||||| |||||||    
T  51453607 tttatttagttagggggtcaaaatcgcaacttcttaaaacata-ggggtcaaaactgctattaa 51453545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 49001741 - 49001648
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||| ||| |||| |||||||| |||| |||||||||| | ||||||||||| |||||||||| ||| ||||||||| ||| ||||| ||||    
T  49001741 caatacatagggggctgttttgtattttaattagttaggaggtcaaaatcgcaatttcttaaaacatagagggccaaaagtacaattaagccta 49001648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 229
Target Start/End: Original strand, 55228029 - 55228122
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||| ||| |||| |||||||| |||| |||||||||   ||||||||||||||||||||||  ||||||||||||| ||  ||||||||||    
T  55228029 caatacatagggggctgttttgtattttaattagttaggggtccaaaatcgcaacttcttaaaatatagggggccaaaagtataattaaaccta 55228122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 32831468 - 32831539
Alignment:
Q  153 ttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||||||||||||||||||   ||||||| ||||||| || |||| |||||||||||||||| ||||||    
T  32831468 ttttgtagtttatttagttaggggaccaaaattgcaacttttttaaacatagggggccaaaactattattaa 32831539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 51225017 - 51224939
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| |||||||||  ||||||||||||||||||| |||| |||| ||||||||    
T  51225017 caatacgtagggggctgttttgtattttaattagttagggggccaaaatcgcaacttcttgaaacataggaggccaaaa 51224939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 51453767 - 51453813
Alignment:
Q  56 aaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaa 102  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||    
T  51453767 aaaataaatacacatgtggcgtccacgtcagctttgacttggtcaaa 51453813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 54476134 - 54476056
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| |||||||||  | |||||||||||||||||||||  |||||||||||||    
T  54476134 caatacatagggggctgttttgtattttaattagttagggggtcaaaatcgcaacttcttaaaatatagggggccaaaa 54476056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 54477308 - 54477370
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| ||| |||||| ||||||||| |||||||||||||| |||||||||||||    
T  54477308 gttttgtattttagttaattaggaggccaaaatcacaacttcttaaaacatagggggccaaaa 54477370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 229
Target Start/End: Original strand, 3354908 - 3355001
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||||||| |||| |  ||||| ||||||| ||||||   |||||||||||||||||| | ||||||||||||||| || ||||||| ||||    
T  3354908 caatacttagggggctggattgtattttattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 3355001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 51226489 - 51226564
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacc 227  Q
    |||||||| |||| |||||||||   ||||||||||||||||||||||| |||||| |||||| | | ||||||||    
T  51226489 gttttgtattttaattagttaggggtccaaaatcgcaacttcttaaaacataggggaccaaaagtgcaattaaacc 51226564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 1807326 - 1807368
Alignment:
Q  64 tacacacgtggcgtccatgtcagctttgacttggtcaaaattg 106  Q
    |||||||| |||||||| |||||||||||||||||||||||||    
T  1807326 tacacacgcggcgtccacgtcagctttgacttggtcaaaattg 1807368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 17256659 - 17256581
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| |||||||||  |||||||| |||||||||| |||  |||||||||||||    
T  17256659 caatacatagggggctgttttgtattttaattagttagggggccaaaattgcaacttcttgaaatatagggggccaaaa 17256581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 17258153 - 17258231
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| || ||||||   |||||||||||||||||| |||| |||||||||||||    
T  17258153 caatacatagggggctgttttgtattttaatttgttaggggtccaaaatcgcaacttcttgaaacatagggggccaaaa 17258231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 189
Target Start/End: Complemental strand, 37755000 - 37754871
Alignment:
Q  56 aaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttt 155  Q
    |||||||||||||| |||||||||||||  || |||||||  |||||||||| |||  ||| ||||||| |        ||||||||||  || ||||||    
T  37755000 aaaataaatacacatgtggcgtccatgtgtgcattgactttatcaaaattgacatg--gggtcaaaactgcaaaaaag-tcaatacttaagggacagttt 37754904  T
Q  156 tgtagtttatttagttaggaagccaaaatcgcaa 189  Q
    |||||||||||||||||||  |||||||||||||    
T  37754903 tgtagtttatttagttagg-ggccaaaatcgcaa 37754871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 5049580 - 5049664
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaa-cttagggggccaaaactactattaaacctat 230  Q
    |||| |||||||| |||| |||||||||| |||||||||||||||| | ||||  | |||||||||||| | | |||||||||||    
T  5049580 gggctgttttgtattttaattagttaggaggccaaaatcgcaacttttgaaaagataagggggccaaaagtgcaattaaacctat 5049664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 6128517 - 6128569
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctatt 231  Q
    |||||||||||||||||||||  ||| ||||||||||| |||||||| |||||    
T  6128517 caaaatcgcaacttcttaaaatatagtgggccaaaactgctattaaatctatt 6128569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 10732370 - 10732462
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    |||||| ||| |||| |||||||| |||| |||||||||   | |||||||||||||||| |||| || |||||||||| | | |||||||||    
T  10732370 caatacatagggggctgttttgtattttaattagttaggggtcgaaaatcgcaacttcttgaaacataaggggccaaaagtgcaattaaacct 10732462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 14349375 - 14349427
Alignment:
Q  180 aaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctatta 232  Q
    |||||||||||||| ||||| ||||||||| |||||| ||||||| |||||||    
T  14349375 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcctatta 14349427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 1807413 - 1807483
Alignment:
Q  153 ttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||| |||||||  || |||| |||||||||||| |||||||||  ||||||||||||||| |||||||    
T  1807413 ttttgtattttatttttttgggaa-ccaaaatcgcaaattcttaaaatatagggggccaaaactgctattaa 1807483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 4474297 - 4474383
Alignment:
Q  140 acttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||||||||| |||||||| ||| |||   ||||  ||||||||||||||||| ||||| ||||| ||  |||||| ||||||||||||    
T  4474297 acttagagggcggttttgtaattttttt---tagggggccaaaatcgcaacttcgtaaaagttaggaggagaaaactgctattaaaccta 4474383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 227
Target Start/End: Original strand, 44586013 - 44586100
Alignment:
Q  140 acttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacc 227  Q
    |||||| |||| |||||||||||| |||  |||||  ||||||||||||||||    ||| ||||||||| |||||| ||||||||||    
T  44586013 acttagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaaacc 44586100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 2181390 - 2181328
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| || ||||||   |||||||||||||||||| |||| |||||||||||||    
T  2181390 gttttgtattttaattcgttaggggtccaaaatcgcaacttcttgaaacatagggggccaaaa 2181328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 3354821 - 3354755
Alignment:
Q  155 ttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactat 221  Q
    ||||| |||||||  |||||| ||||||||||||| ||| | | |||||||||||||||||| ||||    
T  3354821 ttgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 3354755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 32772019 - 32772081
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| |||||||||   |||||||| ||||||||| |||| |||||||||||||    
T  32772019 gttttgtattttaattagttaggggaccaaaatcacaacttcttgaaacatagggggccaaaa 32772081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 33447210 - 33447272
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    ||||| || |||| ||||| ||| | ||||||||||||||||||||||| |||||| ||||||    
T  33447210 gttttatattttaattagtcagggaaccaaaatcgcaacttcttaaaacataggggaccaaaa 33447272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 33944838 - 33944928
Alignment:
Q  142 ttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctatta 232  Q
    |||| |||| |||||||| |||| |||||||||    ||||||||||||||||| |||| ||| ||||||||| | | ||||| |||||||    
T  33944838 ttagggggctgttttgtattttaattagttaggggttcaaaatcgcaacttcttgaaacatagagggccaaaagtgcaattaagcctatta 33944928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 35495171 - 35495248
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| ||||||||| | |||||||||||||||||| |||  || ||||||||||    
T  35495171 caatacatagggggctgttttgtattttaattagttaggga-ccaaaatcgcaacttcttgaaatataaggggccaaaa 35495248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 40988673 - 40988611
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| |||||||||   |||||||||||||||||| |||| ||||| |||||||    
T  40988673 gttttgtattttaattagttaggggaccaaaatcgcaacttcttgaaacatagggagccaaaa 40988611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 45333779 - 45333737
Alignment:
Q  64 tacacacgtggcgtccatgtcagctttgacttggtcaaaattg 106  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||    
T  45333779 tacacacatggcggccatgtcagcattgacttggtcaaaattg 45333737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 48348304 - 48348258
Alignment:
Q  178 ccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||||||||||| ||||| ||||||||| |||||| |||||||    
T  48348304 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 48348258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 49002740 - 49002802
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| |||||||||   |||||||||||||||||| ||| |||| |||||||||    
T  49002740 gttttgtattttaattagttaggggtccaaaatcgcaacttcttgaaaattagagggccaaaa 49002802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 50380230 - 50380168
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    ||||| || |||| ||| |||||  |||||||||||||||||||||||| ||| |||||||||    
T  50380230 gttttatattttaattaattagggggccaaaatcgcaacttcttaaaacatagagggccaaaa 50380168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 3193047 - 3193100
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctatta 232  Q
    ||||||||||||||||| ||| ||||||||  |||||| ||||||| |||||||    
T  3193047 caaaatcgcaacttcttgaaagttagggggtgaaaactgctattaagcctatta 3193100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 7218412 - 7218473
Alignment:
Q  170 ttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctatt 231  Q
    ||||| |||||||||||||||||   |||| ||||||||| |||| | ||||||||||||||    
T  7218412 ttagggagccaaaatcgcaactttaaaaaaattagggggctaaaattgctattaaacctatt 7218473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 16883800 - 16883853
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctatta 232  Q
    ||||||||||||||  | | |||||||||||||||| ||||||||| |||||||    
T  16883800 caaaatcgcaactttctgatacttagggggccaaaaatactattaagcctatta 16883853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 17773250 - 17773173
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||| |||||||||||| |||  |||||  ||||||||||||||||  | ||| ||||||||| |||||| |||||||    
T  17773250 gggcggttttgtagtttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaa 17773173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 19074551 - 19074474
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||| |||||||||||| |||  |||||  ||||||||||||||||  | ||| ||||||||| |||||| |||||||    
T  19074551 gggcggttttgtagtttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaa 19074474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 20432270 - 20432193
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||| ||||||||||| |||  |||||   ||||| |||||||||| ||||| ||||||||| |||||| |||||||    
T  20432270 gggcatttttgtagttttttttcttaggggaccaaagtcgcaacttcgtaaaagttagggggcaaaaactgctattaa 20432193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 32770725 - 32770664
Alignment:
Q  153 ttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    ||||||| |||  ||||||||||  |||||||||||||||||| |||| |||||| ||||||    
T  32770725 ttttgtattttgattagttaggagtccaaaatcgcaacttcttgaaacataggggaccaaaa 32770664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 36315864 - 36315803
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaa 213  Q
    |||||||| |||| |||||||||   |||||||||||||||||| |||| ||| ||||||||    
T  36315864 gttttgtattttaattagttaggggtccaaaatcgcaacttcttgaaacatagtgggccaaa 36315803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 46335899 - 46335858
Alignment:
Q  61 aaatacacacgtggcgtccatgtcagctttgacttggtcaaa 102  Q
    |||||| ||||||||||||| | |||||||||||||||||||    
T  46335899 aaatacgcacgtggcgtccacggcagctttgacttggtcaaa 46335858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 50420887 - 50420932
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||||||||||| ||| ||||||| |||||||||| |||||||    
T  50420887 caaaatcgcaacttcataatacttaggaggccaaaactgctattaa 50420932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 51315711 - 51315800
Alignment:
Q  140 acttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||| |||| |||||||||||| |||  |||||  ||||||||||||||||    ||| ||||||||| |||||| ||||||| ||||    
T  51315711 acttagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagccta 51315800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 47284514 - 47284606
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    |||||| ||| |||| |||||||| |||| |||||||||   ||||||||||||||| | ||||  ||||||| ||||| | | |||||||||    
T  47284514 caatacatagggggctgttttgtattttaattagttaggggaccaaaatcgcaacttttaaaaagatagggggtcaaaagtgcaattaaacct 47284606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 8e-30; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 61 - 224
Target Start/End: Complemental strand, 7196841 - 7196679
Alignment:
Q  61 aaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttttgtag 160  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||   || ||||| |||||| |        ||||||||||| ||||||||||||||    
T  7196841 aaatacacacgtggcgtccacatcagctttgacttggtcaaaattggcctggggggctaaaactgcaaaaaag-tcaatacttagggggcagttttgtag 7196743  T
Q  161 tttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||||||||| | ||||||||||||||||||| |||  ||| ||| ||||||| |||||||    
T  7196742 tttatttagttagcaggccaaaatcgcaacttcttgaaatatagagggtcaaaactgctattaa 7196679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 216
Target Start/End: Complemental strand, 6129416 - 6129255
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnn--tcaatacttagagggcagtt 154  Q
    ||||||||||| | |||||||||| |||||||||||||||||||||||||| ||  || ||||||||| |          ||||||||||  || | |||    
T  6129416 aaataaatacatatgtggcgtccacgtcagctttgacttggtcaaaattgacatagggagccaaaactgcaaaaaagaagtcaatacttaagggacggtt 6129317  T
Q  155 ttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    |||||||||||||| ||||| ||||||||| ||||||||||||||  |||||| ||||||||    
T  6129316 ttgtagtttatttaattagggagccaaaattgcaacttcttaaaatataggggaccaaaact 6129255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 7196933 - 7197029
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctatt 231  Q
    ||||||||||| ||||  |||||||||||||||||||||| || |||||||||||||||||||||| || |||| | ||||| ||||||| ||||||    
T  7196933 tcaatacttagggggcgattttgtagtttatttagttagggagtcaaaatcgcaacttcttaaaacataaggggtcgaaactgctattaagcctatt 7197029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 216
Target Start/End: Original strand, 40876967 - 40877048
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    ||||||||||  |||| |||||||||||||||||||||||  |||||||||||||||||||  ||| |||||||||||||||    
T  40876967 tcaatacttaaggggcggttttgtagtttatttagttagggggccaaaatcgcaacttcttggaacatagggggccaaaact 40877048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 37008296 - 37008220
Alignment:
Q  148 ggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||||||| ||||||| ||||||  ||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  37008296 ggcagttttgtattttattttgttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaa 37008220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 40345553 - 40345631
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||||||||||||||||||| ||||||| |||| || |||||||||||||||| ||||||| || | ||||||||    
T  40345553 caatacttagagggcagttttgtattttattttgttatgaggccaaaatcgcaactttttaaaacataagaggccaaaa 40345631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 57 - 200
Target Start/End: Complemental strand, 45719507 - 45719366
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagtttt 156  Q
    ||||||||| | | |||||||||| |||||||||||||||||||||||||  ||| |||||||||||| |        |||||||||||  ||| |||||    
T  45719507 aaataaatatatatgtggcgtccacgtcagctttgacttggtcaaaattggcatggggggccaaaactgc-taaaaaatcaatacttaggaggcggtttt 45719409  T
Q  157 gtagtttatttagttaggaagccaaaatcgcaacttcttaaaac 200  Q
     |||||||||||||||||  ||||||||||||| |||| |||||    
T  45719408 atagtttatttagttagg-ggccaaaatcgcaatttctaaaaac 45719366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 50503792 - 50503714
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| |||||||| |||||||| |||| |||||||||  |||||||||||||||||||||||| |||||| ||||||    
T  50503792 caatacatagagggctgttttgtattttaattagttagggggccaaaatcgcaacttcttaaaacataggggaccaaaa 50503714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 6129588 - 6129661
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttaggggg 208  Q
    |||||||||||  |||||||||||||||||||||||||||  || ||||||||||| ||||||||| |||||||    
T  6129588 tcaatacttaggaggcagttttgtagtttatttagttagggggcaaaaatcgcaacatcttaaaacataggggg 6129661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 229
Target Start/End: Original strand, 29816317 - 29816487
Alignment:
Q  56 aaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttt 155  Q
    ||||||| |||||| ||||||||||  ||||| ||||||||||||||||||  ||| |||||||||||| |         ||||||||||||||  || |    
T  29816317 aaaataattacacatgtggcgtccaaatcagcattgacttggtcaaaattggcatg-ggggccaaaactgcaaaatgga-caatacttagagggttgtat 29816414  T
Q  156 tgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||| ||||||| ||| || | |||||||||||||||||| | | ||| |||| ||||||||||||||||||||    
T  29816415 tgtattttattttgttgggga-ccaaaatcgcaacttcttgatatttaaggggtcaaaactactattaaaccta 29816487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 216
Target Start/End: Original strand, 46895762 - 46895843
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    ||||||||||| |||| |||||||| |||||||||||| |  | ||||||||||||||||| |||| |||||||||||||||    
T  46895762 tcaatacttagggggcggttttgtaatttatttagttatggggtcaaaatcgcaacttcttgaaacatagggggccaaaact 46895843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 51549362 - 51549459
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctatta 232  Q
    ||||||| ||| |||| |||||||| |||| |||||||||   |||||||||||||||||| |||||||||||||||||| | | ||||| |||||||    
T  51549362 tcaatacatagggggctgttttgtattttaattagttaggggtccaaaatcgcaacttcttgaaacttagggggccaaaattgcaattaagcctatta 51549459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 1406473 - 1406413
Alignment:
Q  64 tacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaact 124  Q
    ||||||||||||||||| |||||| |||||||||||||||||||  |||||||||||||||    
T  1406473 tacacacgtggcgtccacgtcagcattgacttggtcaaaattgacctgaggggccaaaact 1406413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 46895527 - 46895440
Alignment:
Q  137 aatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||||| || ||||||||||||||||||||||||     ||||||||||||||||| |||  ||||||||||||||| |||||||    
T  46895527 aatacttaggggacagttttgtagtttatttagttagaggatcaaaatcgcaacttcttgaaatatagggggccaaaactgctattaa 46895440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 6912402 - 6912501
Alignment:
Q  136 caatacttagagggcagttttgtagttt-atttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctattatt 234  Q
    |||||| ||| |||| |||||||| ||| | |||||||||| |||||||||||||||| | ||||  ||||||||||||| | | |||||||||||||||    
T  6912402 caatacatagggggctgttttgtatttttaattagttaggaggccaaaatcgcaacttttcaaaagatagggggccaaaagtgcaattaaacctattatt 6912501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 216
Target Start/End: Original strand, 45719673 - 45719751
Alignment:
Q  137 aatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    |||||||||  ||| |||||||||||||||||||||||  || ||||||||||||||||||||| |||| || |||||||    
T  45719673 aatacttaggaggcggttttgtagtttatttagttagg-ggctaaaatcgcaacttcttaaaacataggaggtcaaaact 45719751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 35580891 - 35580969
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| |||||||||| |||||||||||||||| | ||||  |||||||||||||    
T  35580891 caatacatagggggctgttttgtattttaattagttaggaggccaaaatcgcaacttttgaaaaaatagggggccaaaa 35580969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 231
Target Start/End: Original strand, 367057 - 367237
Alignment:
Q  51 taatcaaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaat-gaggggccaaaactacnnnnnnnntcaatacttagaggg 149  Q
    |||| |||| || |||||| ||||||||||  |||||||||||||| ||||||||||  | | |||||||||||| |         |||||||||| ||     
T  367057 taattaaaaaaattacacatgtggcgtccacatcagctttgacttgttcaaaattgacctaggggggccaaaactgcaaaatggg-caatacttagggga 367155  T
Q  150 cagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctatt 231  Q
    || ||||||| ||||||| ||||||  |||||||||||||| |||| |||  ||||||  ||||||| ||||||| ||||||    
T  367156 caattttgtattttattttgttagggggccaaaatcgcaacctcttgaaatataggggatcaaaactgctattaagcctatt 367237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 15788502 - 15788437
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaac 200  Q
    |||||||||||  ||| |||||||||||||||||||||||  ||||| ||||||||||||| ||||    
T  15788502 tcaatacttaggaggcggttttgtagtttatttagttagggggccaatatcgcaacttcttgaaac 15788437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 216
Target Start/End: Complemental strand, 40876792 - 40876711
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    ||||||||||| | || |||||||||||||||||||||||  || |||||| ||||||||| |||  ||||||| |||||||    
T  40876792 tcaatacttagggagcggttttgtagtttatttagttaggtggctaaaatcacaacttcttgaaatatagggggtcaaaact 40876711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 39642287 - 39642203
Alignment:
Q  140 acttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||| |||| |||||||||||| |||| ||||   ||||||||||||||||| | ||| ||||||||| |||||| |||||||    
T  39642287 acttagggggcggttttgtagtttttttatttagagggccaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaa 39642203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 3814839 - 3814757
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctat 230  Q
    |||| ||||||||||||| |||||||||  ||||||||| ||||||||| |||| |||||||| ||| || ||||||| |||||    
T  3814839 gggcggttttgtagttta-ttagttagggggccaaaatcacaacttcttgaaacatagggggctaaatctgctattaagcctat 3814757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 12075265 - 12075324
Alignment:
Q  165 tttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||||||  ||||||||||||||||||  |||| ||||||||||||||| |||||||    
T  12075265 tttagttagggggccaaaatcgcaacttctgtaaacatagggggccaaaactgctattaa 12075324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 3815048 - 3815114
Alignment:
Q  165 tttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctatt 231  Q
    ||||||||||  ||||||||||||||||||| |||| ||||||  ||||||| ||||||| ||||||    
T  3815048 tttagttagggggccaaaatcgcaacttcttgaaacataggggttcaaaactgctattaagcctatt 3815114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 4474830 - 4474768
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| ||||||||| | | ||||| ||||||||||||||| |||||||||||||    
T  4474830 gttttgtattttaattagttagggatctaaaattgcaacttcttaaaacatagggggccaaaa 4474768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 21258994 - 21258932
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| ||||||||||  ||||||||||||||||||||||| |||| || |||||    
T  21258994 gttttgtattttaattagttaggagtccaaaatcgcaacttcttaaaacataggtggtcaaaa 21258932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 229
Target Start/End: Original strand, 41915744 - 41915838
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||||||||  |||  ||||||||||||||||| |||||    ||||||||||||||||| |||  |||||| |||||||| ||||||| ||||    
T  41915744 tcaatacttaaggggtggttttgtagtttatttatttaggggatcaaaatcgcaacttcttgaaatataggggaccaaaactgctattaagccta 41915838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 43117347 - 43117257
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaa 225  Q
    |||||||||||  ||  ||||||||||||||||| ||||    |||||||||||||||||| |||| |||| ||| |||||| ||||||||    
T  43117347 tcaatacttaggaggtggttttgtagtttatttatttagaggaccaaaatcgcaacttcttgaaacataggtggctaaaactgctattaaa 43117257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 50504789 - 50504851
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| |||||||||   ||||||||||||||||||||||| ||||||| |||||    
T  50504789 gttttgtattttaattagttaggggtccaaaatcgcaacttcttaaaacatagggggtcaaaa 50504851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 6606921 - 6607014
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    ||||||| ||| |||| |||||||| |||| |||||||||  |||||||||||||||| | ||||  || |||| ||||| ||| |||||||||    
T  6606921 tcaatacatagggggctgttttgtattttaattagttagggggccaaaatcgcaacttttgaaaaaataaggggtcaaaagtacaattaaacct 6607014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 7058363 - 7058424
Alignment:
Q  153 ttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    ||||||| |||| |||||||||   |||||||||||||||||| |||| |||||||||||||    
T  7058363 ttttgtattttacttagttaggggtccaaaatcgcaacttcttgaaacatagggggccaaaa 7058424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 10231118 - 10231179
Alignment:
Q  155 ttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    ||||| ||||||| |||||   |||||||||| |||||||||| ||||||||||||||||||    
T  10231118 ttgtattttattttgttagagggccaaaatcgaaacttcttaatacttagggggccaaaact 10231179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 37008437 - 37008482
Alignment:
Q  61 aaatacacacgtggcgtccatgtcagctttgacttggtcaaaattg 106  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||||    
T  37008437 aaatacacatgtggcgtccacgtcagctctgacttggtcaaaattg 37008482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 46038991 - 46038898
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||| ||| |||| |||||||| |||| |||||||||  |||||||||| ||||| | ||||  ||||||||||||| | | ||||||||||    
T  46038991 caatacatagggggctgttttgtattttaattagttagggggccaaaatcgtaacttttgaaaagatagggggccaaaagtgcaattaaaccta 46038898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 3377588 - 3377504
Alignment:
Q  140 acttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||| |||| |||||||||||| |||  |||||  ||||||||||||||||   |||| ||||||||| |||||| |||||||    
T  3377588 acttagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaa 3377504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 23953116 - 23953160
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaactactatta 223  Q
    ||||||||||||||||| |||| ||||||||||||||| ||||||    
T  23953116 caaaatcgcaacttcttgaaacatagggggccaaaactgctatta 23953160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 228
Target Start/End: Original strand, 50401599 - 50401686
Alignment:
Q  140 acttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    ||||||||| | |||||||||||| |||  | |||| |||||||||||||||||  |||| ||| ||||| |||||| |||||||||||    
T  50401599 acttagaggacggttttgtagtttttttcttaagga-gccaaaatcgcaacttcgaaaaaattaaggggcgaaaactgctattaaacct 50401686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 12075018 - 12074959
Alignment:
Q  165 tttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||||||  | ||||||||||||||||| |||| ||||| ||||||||| |||||||    
T  12075018 tttagttagggggtcaaaatcgcaacttcttgaaacatagggagccaaaactgctattaa 12074959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 18632603 - 18632650
Alignment:
Q  177 gccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||||||||||||| ||||| ||||||||| |||||| |||||||    
T  18632603 gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 18632650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 49695441 - 49695378
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaa 199  Q
    |||||| ||| |||| |||||||| |||| ||| |||||  |||||||||||||||||||||||    
T  49695441 caatacatagggggctgttttgtattttaattaattagggggccaaaatcgcaacttcttaaaa 49695378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 50877796 - 50877859
Alignment:
Q  153 ttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    ||||||| |||| |||||||||  ||||| |||||||||||||||||| |||| ||||| ||||    
T  50877796 ttttgtattttaattagttagggggccaatatcgcaacttcttaaaacataggtggccagaact 50877859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 4476180 - 4476242
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| ||| |||||  |||||||||||||||||||||||  ||| |||||||||    
T  4476180 gttttgtattttaattaattagggggccaaaatcgcaacttcttaaaatatagagggccaaaa 4476242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 10532263 - 10532213
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||||||||||||| ||| |||||||||| ||||||| ||||||| ||||    
T  10532263 caaaatcgcaacttcctaatacttagggggtcaaaactgctattaagccta 10532213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 229
Target Start/End: Original strand, 13344397 - 13344491
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||||| ||| |||  |||||||| |||| |||||||||   ||||||||||||||| | ||||  ||||||||||||| | | ||||||||||    
T  13344397 tcaatacatagggggttgttttgtattttaattagttaggggaccaaaatcgcaacttttgaaaaaatagggggccaaaagtgcaattaaaccta 13344491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 26811528 - 26811466
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| |||||||||| |||||||||||||||| | ||||  ||||||| |||||    
T  26811528 gttttgtattttaattagttaggaggccaaaatcgcaacttttgaaaagatagggggtcaaaa 26811466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 226
Target Start/End: Complemental strand, 37696340 - 37696250
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaac 226  Q
    |||||| ||| |||| |||||||| |||| ||||| ||| || |||||||| ||||| | ||||  ||||||||||||| ||| |||||||    
T  37696340 caatacatagggggctgttttgtattttaattagtcagggagtcaaaatcgtaacttttgaaaagatagggggccaaaagtacaattaaac 37696250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 39384569 - 39384643
Alignment:
Q  155 ttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||| |||||||  |||||| |||||| |||||||||| | | ||||||||| ||||||||||| |||| ||||    
T  39384569 ttgtattttattttattaggaggccaaattcgcaacttcctgatacttaggggaccaaaactactgttaagccta 39384643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 44743694 - 44743787
Alignment:
Q  137 aatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctatt 231  Q
    ||||||||  |||| |||||||| ||||||| |||| |  | ||||||||||||||||  |||| | |||||||||||||  |||||||||||||    
T  44743694 aatacttatggggcggttttgtattttattttgttatgg-gtcaaaatcgcaacttctggaaacattgggggccaaaactgatattaaacctatt 44743787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 51690354 - 51690396
Alignment:
Q  64 tacacacgtggcgtccatgtcagctttgacttggtcaaaattg 106  Q
    ||||||||||||||||| |||| | ||||||||||||||||||    
T  51690354 tacacacgtggcgtccacgtcaacattgacttggtcaaaattg 51690396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 366977 - 366889
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttag-ttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||||| |||| |||||||| ||||||| | |||||  |  ||||||  ||||||||||||| ||||||||||||||| |||||||    
T  366977 caatacttagggggc-gttttgtattttattttggttagggggttaaaatcataacttcttaaaacatagggggccaaaactgctattaa 366889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 1484689 - 1484742
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctatta 232  Q
    ||||||| ||||||| ||| |||||| ||||||||||| |||||||||| ||||    
T  1484689 caaaatcacaacttcctaatacttagagggccaaaactgctattaaaccaatta 1484742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 25085485 - 25085397
Alignment:
Q  140 acttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||||||||| |||||||||||| |||  |||||  | ||||||||||||||  | ||| ||||||||| |||||| ||||||| ||||    
T  25085485 acttagagggcggttttgtagttttttttcttaggg-gtcaaaatcgcaactttatgaaagttagggggcgaaaactgctattaagccta 25085397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 39384399 - 39384358
Alignment:
Q  64 tacacacgtggcgtccatgtcagctttgacttggtcaaaatt 105  Q
    |||||| |||||||||| |||||| |||||||||||||||||    
T  39384399 tacacaggtggcgtccacgtcagcattgacttggtcaaaatt 39384358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 39384482 - 39384523
Alignment:
Q  65 acacacgtggcgtccatgtcagctttgacttggtcaaaattg 106  Q
    |||||||||||||| | |||||| ||||||||||||||||||    
T  39384482 acacacgtggcgtctacgtcagcattgacttggtcaaaattg 39384523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 207
Target Start/End: Complemental strand, 3612152 - 3612124
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggg 207  Q
    |||||||||||||||||||||||||||||    
T  3612152 caaaatcgcaacttcttaaaacttagggg 3612124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 10532480 - 10532568
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||||| |||| |  ||||| ||||||| ||| |   |||||||||| |||||| ||| || ||||||||||||||| |||||||    
T  10532480 caatacttagggggctggattgtattttattttgttggagggccaaaatcgtaacttcctaatacatagggggccaaaactgctattaa 10532568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 46573054 - 46573138
Alignment:
Q  140 acttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||| ||||||| ||||||||| |||  |||||   |||||||||||||||| ||||| |||| || | |||||| |||||||    
T  46573054 acttagggggcagtgttgtagttttttttcttaggggaccaaaatcgcaacttcgtaaaagttagaggacaaaaactgctattaa 46573138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 46880786 - 46880738
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaactactattaaacc 227  Q
    ||||||||||||||| ||||| |||||| || |||||| ||||||||||    
T  46880786 caaaatcgcaacttcgtaaaaattagggagcgaaaactgctattaaacc 46880738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 48441152 - 48441076
Alignment:
Q  140 acttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    |||||| |||| |||||||||||| |||| ||| |  | |||||| |||| || |||||||||||||||| ||||||    
T  48441152 acttagggggcggttttgtagtttttttatttaaggggtcaaaattgcaattttttaaaacttagggggctaaaact 48441076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 216
Target Start/End: Original strand, 7873777 - 7873934
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagtttt 156  Q
    |||||||||| ||||||||| | |  ||||||||||||||||||||||||  ||| |||||||||||| |        |||||| |||| |||| |||||    
T  7873777 aaataaatacgcacgtggcgccgacatcagctttgacttggtcaaaattggcatggggggccaaaactgcaaaaaa--tcaataattagggggcggtttt 7873874  T
Q  157 gtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    |||||||||||||||||| |||||||||| ||| ||||| |||| |||||||||||||||    
T  7873875 gtagtttatttagttagggagccaaaatcacaatttcttgaaacatagggggccaaaact 7873934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 57 - 227
Target Start/End: Original strand, 10691535 - 10691703
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagtttt 156  Q
    ||||||||||| | |||| ||||| |||||||||||||||||||||||||  ||| |||||||||||| |        ||||||||||| |||| |||||    
T  10691535 aaataaatacatatgtggtgtccacgtcagctttgacttggtcaaaattggcatg-ggggccaaaactgcaaaaaag-tcaatacttagggggcggtttt 10691632  T
Q  157 gtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacc 227  Q
    ||||||||||||||||||  |||||||||| |||||||| |||| |||||||  |||||| | ||||||||    
T  10691633 gtagtttatttagttagggggccaaaatcgtaacttcttgaaacatagggggtaaaaactgcaattaaacc 10691703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 224
Target Start/End: Original strand, 43077947 - 43078114
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagtttt 156  Q
    ||||||||||||||||||| |||| ||  || ||||||||||||||||||   || |||||||||||| |        ||||||||||  |||| |||||    
T  43077947 aaataaatacacacgtggcatccacgtgtgcattgacttggtcaaaattggtctggggggccaaaactgcaaaaaaagtcaatacttaaggggctgtttt 43078046  T
Q  157 gtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||||||| |||||  ||||||||||||||||||| ||||  ||||||||||| || |||||||    
T  43078047 gtagtttatttaattagggggccaaaatcgcaacttcttgaaacagagggggccaaatctgctattaa 43078114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 228
Target Start/End: Complemental strand, 9477308 - 9477132
Alignment:
Q  51 taatcaaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggc 150  Q
    |||| |||| || ||||||||| ||| ||| ||||| ||||||||||||||||||||  || | |||||||||| |         ||||||||| |||||    
T  9477308 taataaaaaaaattacacacgtagcgcccacgtcagatttgacttggtcaaaattgatctgggaggccaaaactgcaaaagggg-caatacttaaagggc 9477210  T
Q  151 agttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    ||||||||| ||||||| |||| |  || ||||||||||||| ||||||| ||||||||||||||| |||||||||||    
T  9477209 agttttgtattttattttgttaaggggctaaaatcgcaactttttaaaacatagggggccaaaactgctattaaacct 9477132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 61 - 214
Target Start/End: Complemental strand, 10691463 - 10691311
Alignment:
Q  61 aaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttttgtag 160  Q
    ||||||||||||||| |||||||  || ||||||| ||||||||||   || ||||||||| || |        ||||||||||  ||||||||||||||    
T  10691463 aaatacacacgtggcatccatgtgtgcattgactttgtcaaaattggtctggggggccaaagctgcaaaaaag-tcaatacttaaggggcagttttgtag 10691365  T
Q  161 tttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    ||||||||||||||  ||||||||||||||||||| |||| |||||||||||||    
T  10691364 tttatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaa 10691311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 229
Target Start/End: Complemental strand, 7873672 - 7873507
Alignment:
Q  63 atacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttttgtagtt 162  Q
    |||||||||||||||||||||  || ||||||||||||||||||    | |||| ||||||| |        ||||||||||| |||| |||||||||||    
T  7873672 atacacacgtggcgtccatgtgtgcattgacttggtcaaaattggttcg-ggggtcaaaactgcaaaaaaagtcaatacttagggggcggttttgtagtt 7873574  T
Q  163 tatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||||||||||  ||||||||||||||| ||| |||| ||||||| ||||||| | ||||| ||||    
T  7873573 tatttagttagggggccaaaatcgcaactccttgaaacatagggggtcaaaactgcaattaagccta 7873507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 34116105 - 34116177
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaa 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| | || || |||||||||||||||||||||    
T  34116105 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttgatacata-ggggccaaaactactattaaa 34116177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 229
Target Start/End: Original strand, 29933495 - 29933589
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||||||||| |||  |||||||||||| ||||||||||| |||||||||||||||||||||||| ||| ||| |||||||  |||||| ||||    
T  29933495 tcaatacttagggggttgttttgtagtttttttagttaggaggccaaaatcgcaacttcttaaaacatagagggtcaaaactgttattaagccta 29933589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 224
Target Start/End: Complemental strand, 29933358 - 29933193
Alignment:
Q  56 aaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttt 155  Q
    ||||||||||||||||||||||||||||  || |||||||| |||||||||   ||   |||||||| |          |||||||||||||||| ||||    
T  29933358 aaaataaatacacacgtggcgtccatgtgtgcattgacttgatcaaaattggtctg---ggccaaaagtgtaaaaaaagtcaatacttagagggcggttt 29933262  T
Q  156 tgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    | ||||||||||| ||||   ||||||||||||||||||| |||| |||| || ||||||| |||||||    
T  29933261 tatagtttatttaattagagggccaaaatcgcaacttcttgaaacataggaggtcaaaactgctattaa 29933193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 6385771 - 6385863
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    |||||||||||||  ||||||||||||||||||||||||||  | ||||| |||| |||||||||| |||||| |||||||| | |||||||||    
T  6385771 tcaatacttagaga-cagttttgtagtttatttagttaggagactaaaattgcaatttcttaaaacataggggaccaaaactgcaattaaacct 6385863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 231
Target Start/End: Complemental strand, 9143129 - 9142960
Alignment:
Q  61 aaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttttgtag 160  Q
    |||||||||||||||||||| ||  |  |||||| ||||||||||||  || |||||||||||| |        |||||||||||  ||  |||||||||    
T  9143129 aaatacacacgtggcgtccacgtgtgtattgactaggtcaaaattgacttggggggccaaaactgcaaaaaaa-tcaatacttaggtggtggttttgtag 9143031  T
Q  161 tttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctatt 231  Q
    |||||||| ||| | || |||||||||||||||||||||  || |||  ||||||| ||||||||||||||    
T  9143030 tttatttaattatggagtcaaaatcgcaacttcttaaaatataagggatcaaaactgctattaaacctatt 9142960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 229
Target Start/End: Original strand, 26787889 - 26787982
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||||||| |||| |||||||| ||||||| ||||||| || |||||| |||||| || |||  ||||||||||||||||||||||| ||||    
T  26787889 caatacttagggggcggttttgtattttattttgttaggaggcaaaaatcacaactttttgaaatatagggggccaaaactactattaagccta 26787982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 24679067 - 24679147
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    |||||||||| |||| |||||||| ||||||| ||||||  ||||||||||||| ||||| |||| |||||||||||||||    
T  24679067 caatacttagggggctgttttgtattttattttgttagggggccaaaatcgcaatttcttgaaacatagggggccaaaact 24679147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 230
Target Start/End: Complemental strand, 30283560 - 30283403
Alignment:
Q  71 gtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttttgtagtttatttagt 170  Q
    ||||||| ||||| |||||||||||||||||||||||  || |||||||||||| |         |||||||||| ||||| ||||||| ||||||| ||    
T  30283560 gtggcgttcatgttagctttgacttggtcaaaattgatttggggggccaaaactgcaaaaggg--caatacttagggggcatttttgtattttattttgt 30283463  T
Q  171 taggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctat 230  Q
    || |  ||||||||||||||||||| |||| || ||||  |||||| | ||||| |||||    
T  30283462 tatggggccaaaatcgcaacttcttgaaacataaggggtaaaaactgcaattaagcctat 30283403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 224
Target Start/End: Complemental strand, 43091830 - 43091668
Alignment:
Q  61 aaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttttgtag 160  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||  || ||| |||||||| |        |||||||||| ||| |  ||||||||    
T  43091830 aaatacatatgtggcgtccatgtcagctttgacttggtcaaaattgacttg-gggaccaaaactgc-aaaaaaatcaatacttaaaggacgattttgtag 43091733  T
Q  161 tttatttagttaggaagccaaaatcgcaacttcttaaaacttag-ggggccaaaactactattaa 224  Q
    |||| ||| |||||   | ||||||||||||||||||||| ||| |||||||||| | |||||||    
T  43091732 tttaattaattaggtgactaaaatcgcaacttcttaaaacatagaggggccaaaattgctattaa 43091668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 43092004 - 43092091
Alignment:
Q  137 aatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||||  |||| |||||||||||||||||||||||  |||||||| | |||||||| |||| |||||||||||| || |||||||    
T  43092004 aatacttaaggggcggttttgtagtttatttagttagggggccaaaattgtaacttcttgaaacatagggggccaaatctgctattaa 43092091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 207
Target Start/End: Complemental strand, 43077874 - 43077724
Alignment:
Q  58 aataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatactt-agagggcagtttt 156  Q
    |||||||||||| |||| | |||||||||||||||||||||||||||||   || |||||||||||| |        ||||||||| | ||| |  ||||    
T  43077874 aataaatacacatgtggtgcccatgtcagctttgacttggtcaaaattggcttggggggccaaaactgcaaaaaaaatcaatacttaaaaggacgatttt 43077775  T
Q  157 gtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggg 207  Q
     ||||||||||| |||||   ||||||||||||||| ||||||| ||||||    
T  43077774 atagtttatttaattaggggaccaaaatcgcaacttgttaaaacatagggg 43077724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 229
Target Start/End: Complemental strand, 46199145 - 46199051
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||||||||| |||  ||||||||||||||||| |||||   ||||||||||||||||||||||  ||| ||| ||||||| ||||||| ||||    
T  46199145 tcaatacttagggggtggttttgtagtttatttatttaggggaccaaaatcgcaacttcttaaaatatagaggggcaaaactgctattaagccta 46199051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 26974321 - 26974228
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||| ||| |||| |||||||| |||| ||||||| | |||||||||||||||||||| |||  ||||||||||||| | | ||||||||||    
T  26974321 caatacatagggggctgttttgtattttaattagttaaggagccaaaatcgcaacttcttgaaatatagggggccaaaagtgcaattaaaccta 26974228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 282853 - 282919
Alignment:
Q  165 tttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctatt 231  Q
    ||||||||||  ||||||||||||||||||| |||| |||| |||||||||| ||||||| ||||||    
T  282853 tttagttagggggccaaaatcgcaacttcttgaaacataggaggccaaaactgctattaagcctatt 282919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 18186514 - 18186432
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctattatt 234  Q
    |||||||||||| |||  |||  | ||||||||||||||||| ||||| ||||||||| ||||| ||||||||||||| ||||    
T  18186514 gttttgtagttttttttcttaaaaggccaaaatcgcaacttcataaaagttagggggcgaaaaccactattaaacctaatatt 18186432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 42436920 - 42436842
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| |||||||| |||||||| || | |||||||||   ||||||||| ||||||||||||| |||||||||||||    
T  42436920 caatacatagagggctgttttgtatttcaattagttaggggtccaaaatcgtaacttcttaaaacatagggggccaaaa 42436842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 44565329 - 44565263
Alignment:
Q  161 tttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacc 227  Q
    ||||||| ||||||| |||||||| |||||||| ||| |||||||||| ||||| ||||||||||||    
T  44565329 tttattttgttaggaggccaaaattgcaacttcataatacttagggggtcaaaaatactattaaacc 44565263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 327430 - 327494
Alignment:
Q  165 tttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||||||||  ||||||||||||||||||| |||| |||||||||| |||| ||||||| ||||    
T  327430 tttagttagggggccaaaatcgcaacttcttgaaacatagggggccacaactgctattaagccta 327494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 9477413 - 9477501
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||||  ||||  ||||||| ||||||| ||||||  |||||||||||||||| ||||||| |||| || ||||||| |||||||    
T  9477413 caatacttaaggggcgattttgtattttattttgttagggggccaaaatcgcaactttttaaaacataggaggtcaaaactgctattaa 9477501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 48059173 - 48059257
Alignment:
Q  140 acttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||| |||| |||||||||||| |||  || ||  ||||||||| ||||||||||||||||||||| | |||||| |||||||    
T  48059173 acttagggggcggttttgtagttttttttcttggggtgccaaaatcacaacttcttaaaacttaggggcctaaaactgctattaa 48059257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 8409294 - 8409372
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| ||||||||||||| | |||||||||||||||| | ||||  |||| ||||||||    
T  8409294 caatacatagggggctgttttgtattttatttagttagaaggccaaaatcgcaacttttaaaaagataggaggccaaaa 8409372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 9500167 - 9500213
Alignment:
Q  178 ccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||||||||||||| ||||||||||||| |||||| |||||||    
T  9500167 ccaaaatcgcaacttcttgaaacttagggggctaaaactgctattaa 9500213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 6792023 - 6792112
Alignment:
Q  140 acttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||| |||| |||||||||||| |||  |||||   |||||||||||||||   |||| ||||||||| |||||| ||||||||||||    
T  6792023 acttagggggcggttttgtagttttttttcttaggggaccaaaatcgcaactttggaaaagttagggggctaaaactgctattaaaccta 6792112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 24432637 - 24432709
Alignment:
Q  155 ttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    ||||| ||||||| |||||  |||||||||||||||| || || ||||| |||||||||||| |||||||||||    
T  24432637 ttgtattttattttgttagtgagccaaaatcgcaactcct-aatacttaaggggccaaaactgctattaaacct 24432709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 27756337 - 27756268
Alignment:
Q  155 ttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||| ||||||| ||||||  ||||||||||||||| | ||| ||||| |||||||||||| |||||||    
T  27756337 ttgtattttattttgttagggggccaaaatcgcaactacctaatacttaaggggccaaaactgctattaa 27756268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 35793447 - 35793378
Alignment:
Q  155 ttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||| ||||||| ||||||   | |||||||||||||| ||||| |||||||||||||||| |||||||    
T  35793447 ttgtattttattttgttaggggcctaaaatcgcaacttcctaaaatttagggggccaaaactgctattaa 35793378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 21939338 - 21939390
Alignment:
Q  177 gccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||||||||||||||| | | |||||||||||||||||| ||||||| ||||    
T  21939338 gccaaaatcgcaacttcgtgatacttagggggccaaaactgctattaagccta 21939390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 28350203 - 28350119
Alignment:
Q  140 acttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||| |||| |||||||||||| |||  |||||  |||||||||| |||||| | ||| ||||||||| |||||| |||||||    
T  28350203 acttagggggcggttttgtagttttttttcttagggggccaaaatcgtaacttcgtgaaagttagggggctaaaactgctattaa 28350119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 42437999 - 42438091
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    |||||| ||| ||||  ||||||| |||| |||||||||  ||||||||||||||||||| |||  ||| ||||||||| | | |||||||||    
T  42437999 caatacatagggggctcttttgtattttaattagttagggggccaaaatcgcaacttcttgaaatatagagggccaaaagtgcaattaaacct 42438091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 46265956 - 46265865
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacc 227  Q
    |||| ||||||  ||| |||||||||||| |||  |||||  ||||||||| ||||||||||||||||| ||||  |||||| ||||||||||    
T  46265956 tcaaaacttaggaggcggttttgtagtttttttc-ttagggggccaaaatcccaacttcttaaaacttaaggggttaaaactgctattaaacc 46265865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 6385695 - 6385746
Alignment:
Q  56 aaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattga 107  Q
    |||||||||||| | |||| ||||| |||| |||||||||||||||||||||    
T  6385695 aaaataaatacatatgtggtgtccacgtcatctttgacttggtcaaaattga 6385746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 107
Target Start/End: Original strand, 9143213 - 9143256
Alignment:
Q  64 tacacacgtggcgtccatgtcagctttgacttggtcaaaattga 107  Q
    |||||| ||||||||||  |||||||||||||||||||||||||    
T  9143213 tacacaagtggcgtccacatcagctttgacttggtcaaaattga 9143256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 11742801 - 11742723
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| |||||||| |||||||| |||| ||| ||| || || ||||||||||||| | ||||  |||||||||||||    
T  11742801 caatacatagagggctgttttgtattttaattaattaagaggctaaaatcgcaacttttaaaaagatagggggccaaaa 11742723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 20588377 - 20588455
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| |||||||||  |||||||||||||||| | ||||  ||| |||||||||    
T  20588377 caatacatagggggctgttttgtattttaattagttagggggccaaaatcgcaacttttgaaaagatagagggccaaaa 20588455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 30505105 - 30505175
Alignment:
Q  137 aatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggg 207  Q
    ||||| ||| |||| |||||||| |||| ||||||||||   ||||||||||||||||| |||| ||||||    
T  30505105 aatacatagggggctgttttgtattttaattagttaggagtacaaaatcgcaacttcttgaaacatagggg 30505175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 20185181 - 20185226
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||||||||||| | ||| ||||||||| ||||||||||||||    
T  20185181 caaaatcgcaacttcgtgaaagttagggggcgaaaactactattaa 20185226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 20505238 - 20505320
Alignment:
Q  140 acttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||| |||| |||||||||||| |||  |||||  ||||||||||||||||| |||||  |||||||  |||||| |||||||    
T  20505238 acttagggggcggttttgtagttttttt--ttagggggccaaaatcgcaacttcataaaagctagggggtgaaaactgctattaa 20505320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 229
Target Start/End: Complemental strand, 24432407 - 24432334
Alignment:
Q  156 tgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||| |||||||  ||||| |||||||||||||||||||| | |||||| ||| ||||| | ||||||| ||||    
T  24432407 tgtattttatttttttagggagccaaaatcgcaacttcttgatacttagtgggtcaaaattgctattaagccta 24432334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 29933422 - 29933467
Alignment:
Q  61 aaatacacacgtggcgtccatgtcagctttgacttggtcaaaattg 106  Q
    ||||||||| |||||||||| ||||  |||||||||||||||||||    
T  29933422 aaatacacatgtggcgtccacgtcaattttgacttggtcaaaattg 29933467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 229
Target Start/End: Original strand, 36801839 - 36801916
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||||| |||| |||||||||| || |||||| |||||| | ||||  ||||||||||||| | | ||||||||||    
T  36801839 gttttgtattttaattagttaggaggctaaaatcacaacttttgaaaagatagggggccaaaagtgcaattaaaccta 36801916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 43091925 - 43091974
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattg 106  Q
    ||||||||||||||||| ||| |||||  || ||||||||||||||||||    
T  43091925 aaataaatacacacgtgacgttcatgtgtgcattgacttggtcaaaattg 43091974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 47909643 - 47909590
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaactactattaaacctatta 232  Q
    ||||||||||||| ||| ||||||||||||  ||||||  ||||||||||||||    
T  47909643 caaaatcgcaactccttgaaacttagggggttaaaactgttattaaacctatta 47909590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 223
Target Start/End: Original strand, 21505851 - 21505927
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactatta 223  Q
    ||||||||||||||||| |||  |||||  ||||||||||||||||   |||| ||||||| | |||||| ||||||    
T  21505851 gggcagttttgtagttttttttcttagggggccaaaatcgcaactttgaaaaagttaggggactaaaactgctatta 21505927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 28960737 - 28960651
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||||||||||  |  ||||| ||||||| |||||| | |||||||| ||||||||| | ||||||||| |||||||| |||||||    
T  28960737 caatacttagagggttgaattgtattttattttgttaggga-ccaaaatcacaacttcttgatacttagggg-ccaaaactgctattaa 28960651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 35828511 - 35828451
Alignment:
Q  64 tacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaact 124  Q
    |||||| ||| |||||| |||||| |||||||||| |||||||   |||||||||||||||    
T  35828511 tacacatgtgacgtccacgtcagcattgacttggtgaaaattggtctgaggggccaaaact 35828451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 40790893 - 40790949
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaactt 192  Q
    |||||| ||| |||| |||||||| |||| |||||||||  ||||||||||||||||    
T  40790893 caatacatagggggctgttttgtattttaattagttagggggccaaaatcgcaactt 40790949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 44135548 - 44135604
Alignment:
Q  153 ttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggc 209  Q
    ||||||| |||| ||| |||||| ||||||||| |||||||||||||| || |||||    
T  44135548 ttttgtattttaattaattaggatgccaaaatcacaacttcttaaaacataaggggc 44135604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 46266492 - 46266564
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||||||| |||  |||||  | |||||| |||||||||| |||||||||| || |||||| |||||||    
T  46266492 gttttgtagttttttttcttaggggggcaaaattgcaacttcttgaaacttagggagctaaaactgctattaa 46266564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 8e-24; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 64 - 224
Target Start/End: Complemental strand, 12798886 - 12798730
Alignment:
Q  64 tacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttttgtagttt 163  Q
    |||| |||||||||||| ||||||||||||||||||||||||||  || ||||||||||||||        | ||||||||| |||| |||||||| |||    
T  12798886 tacatacgtggcgtccacgtcagctttgacttggtcaaaattgacctg-ggggccaaaactacaaaaggggt-aatacttag-gggcggttttgtatttt 12798790  T
Q  164 atttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||| ||||||| || |||||||||||||||| |||  ||||||||||||||| |||||||    
T  12798789 attttgttagga-gcaaaaatcgcaacttcttgaaatatagggggccaaaactgctattaa 12798730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 195
Target Start/End: Original strand, 10582048 - 10582180
Alignment:
Q  61 aaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttttgtag 160  Q
    ||||||||| |||||||  |||||||||||||||| ||||||||||   || |||||||||||| |        |||||| |||  || | |||||||||    
T  10582048 aaatacaca-gtggcgtttatgtcagctttgactttgtcaaaattggcctg-ggggccaaaactgcaaaaaaagtcaatatttatgggacggttttgtag 10582145  T
Q  161 tttatttagttaggaagccaaaatcgcaacttctt 195  Q
    ||||||||||||||  |||||||||||||||||||    
T  10582146 tttatttagttagggggccaaaatcgcaacttctt 10582180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 229
Target Start/End: Original strand, 12799015 - 12799108
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||||||| |||  |||||||| ||||||| ||||||   |||||||||||||||||| |||  ||| |||| |||||| ||||||||||||    
T  12799015 caatacttagggggttgttttgtattttattttgttaggtgaccaaaatcgcaacttcttgaaatatagagggctaaaactgctattaaaccta 12799108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 224
Target Start/End: Complemental strand, 2539144 - 2538986
Alignment:
Q  64 tacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaactacnnnnnnnntcaatacttagagggcagttttgtagttt 163  Q
    |||||| |||||||||| |||||||||||||||||||||||    ||| |  ||||||||| |         |||||||||  || || ||||||| |||    
T  2539144 tacacatgtggcgtccacgtcagctttgacttggtcaaaatatccatgggatgccaaaactgcaaaaaaga-caatacttatgggacaattttgtatttt 2539046  T
Q  164 atttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||| ||||||  | |||||||||||||| ||||||| |||||| ||||||||||||||||    
T  2539045 attttgttagg-ggtcaaaatcgcaactttttaaaacataggggaccaaaactactattaa 2538986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 12203967 - 12203891
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaacct 228  Q
    |||||||| |||| |||||||||  | ||||||||||||||||| |||| ||||||||||||| | | |||||||||    
T  12203967 gttttgtattttaattagttagggggtcaaaatcgcaacttcttgaaacatagggggccaaaagtgcaattaaacct 12203891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 11623239 - 11623172
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||| |||||||| |||| |||||||||  ||||||||||||||||||| |||| ||| |||||||||    
T  11623239 gggctgttttgtattttaattagttagggggccaaaatcgcaacttcttgaaacatagagggccaaaa 11623172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 2017263 - 2017185
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| |||||||||   |||||||| ||||||||| ||||||||||| ||||||    
T  2017263 caatacatagggggctgttttgtattttaattagttaggggtccaaaatcacaacttcttgaaacttaggggaccaaaa 2017185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 5003146 - 5003100
Alignment:
Q  170 ttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaact 216  Q
    |||||||| ||||||||||||||||||||| ||||||||| ||||||    
T  5003146 ttaggaagtcaaaatcgcaacttcttaaaagttagggggcgaaaact 5003100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 28574545 - 28574607
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    ||||| || |||| |||||||||  ||||||||||||||||||| |||| |||||||||||||    
T  28574545 gttttatattttaattagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaa 28574607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 10727277 - 10727188
Alignment:
Q  140 acttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||||||||||||||||||||| |||  ||||||  |||||||| |||||||   ||| ||||| ||| |||||| ||||||| ||||    
T  10727277 acttagagggcagttttgtagttttttttcttaggagtccaaaatcacaacttcgctaaagttaggaggcgaaaactgctattaagccta 10727188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 30369832 - 30369787
Alignment:
Q  179 caaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||||||||||||||||| || |||||||||||| |||||||    
T  30369832 caaaatcgcaacttcttaaaacataaggggccaaaactgctattaa 30369787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 33401282 - 33401364
Alignment:
Q  140 acttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||| || |||||||||||||| |||  ||||| ||||||||||| |||||| ||||| ||||||||  |||||| |||||||    
T  33401282 acttaggggacagttttgtagttttttt--ttagggagccaaaatcgtaacttcgtaaaagttagggggtgaaaactgctattaa 33401364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 4793798 - 4793877
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    ||||||||||| |||| |||||||| |||| |||||||||   |||||||||||||| ||| |||| ||| |||| ||||    
T  4793798 tcaatacttagggggctgttttgtattttaattagttaggggtccaaaatcgcaactgcttgaaacatagtgggcaaaaa 4793877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 2173858 - 2173920
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| ||||| ||| || ||||||||| ||||||| |||| |||||||||||||    
T  2173858 gttttgtattttaattagtaagggagtcaaaatcgctacttcttgaaacatagggggccaaaa 2173920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 4037113 - 4037051
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| |||||||||  |||||||||||||||| | ||||  |||||||||||||    
T  4037113 gttttgtattttaattagttagggggccaaaatcgcaacttttgaaaagatagggggccaaaa 4037051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 23350142 - 23350220
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| |||||||||  |||||||||||||||| | ||||  || ||||||||||    
T  23350142 caatacatagggggctgttttgtattttaattagttagggtgccaaaatcgcaacttttgaaaagataaggggccaaaa 23350220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 29873134 - 29873044
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    |||||| ||| |||| |||||||| |||| |||||||||  ||||||||||||||||||| |||| ||  || |||||| ||| ||||||||||    
T  29873134 caatacatagggggctgttttgtattttaattagttaggg-gccaaaatcgcaacttcttgaaacata--ggaccaaaagtacaattaaaccta 29873044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 32591687 - 32591609
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| |||||||| |||||||| |||| ||| |||||  |||||||||||||||| | ||||  ||||| |||||||    
T  32591687 caatacatagagggctgttttgtattttaattaattagggggccaaaatcgcaacttttgaaaagatagggtgccaaaa 32591609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 2164699 - 2164768
Alignment:
Q  155 ttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||| ||||||| ||||||  | ||||||||||||||| | | ||| |||||||||||||| |||||||    
T  2164699 ttgtattttattttgttagggtgtcaaaatcgcaacttcctgatactcagggggccaaaactgctattaa 2164768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 2176332 - 2176401
Alignment:
Q  155 ttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||| ||||||| ||||||  | ||||||||||||||| | | ||| |||||||||||||| |||||||    
T  2176332 ttgtattttattttgttagggtgtcaaaatcgcaacttcctgatactcagggggccaaaactgctattaa 2176401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 7504886 - 7504935
Alignment:
Q  177 gccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaac 226  Q
    |||||||| |||||||||| |||  ||||||||||||||| |||||||||    
T  7504886 gccaaaattgcaacttcttgaaatatagggggccaaaactgctattaaac 7504935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 31001262 - 31001350
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaaa 225  Q
    |||||||||  | ||||||||||| |||| || ||||||  |||||||||  ||||||||||||| ||||| |||||||||  |||||||    
T  31001262 caatacttaaggagcagttttgtattttactttgttaggg-gccaaaatcttaacttcttaaaacatagggagccaaaactgttattaaa 31001350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 9070136 - 9070180
Alignment:
Q  180 aaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||||||||||||| |||| ||||||||||||| | |||||||    
T  9070136 aaaatcgcaacttcttgaaacatagggggccaaaaatgctattaa 9070180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 28960318 - 28960231
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||||| ||| |||| |||||||| |||| |||||||||  |||||||||||||||| |  |||  ||||||||||||| ||| |||||    
T  28960318 caatacatagggggctgttttgtattttaattagttaggg-gccaaaatcgcaacttttggaaagatagggggccaaaagtacaattaa 28960231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 10443 - 10354
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||||||  |||| |||||||||||||||||||||||  |||||||| |||| |||||||||| |||| |||||||||| |||||||    
T  10443 tcaatacttaaggggcggttttgtagtttatttagttagggggccaaaattgcaatttcttaaaacataggaggccaaaactgctattaa 10354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0854 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0854
Description:

Target: scaffold0854; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 3366 - 3428
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| |||||||||  |||||||||||||||||||||||| |||| ||||||||    
T  3366 gttttgtattttaattagttagggggccaaaatcgcaacttcttaaaacataggaggccaaaa 3428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 122552 - 122630
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||| ||| |||| |||||||| |||| |||||||||| |||||||||||||||| |  |||  |||||||||||||    
T  122552 caatacatagggggctgttttgtattttaattagttaggaggccaaaatcgcaacttttggaaagatagggggccaaaa 122630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 9782 - 9831
Alignment:
Q  56 aaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaatt 105  Q
    |||| |||||||||||||||| |||||| ||| |||||||||||||||||    
T  9782 aaaaaaaatacacacgtggcgaccatgttagcgttgacttggtcaaaatt 9831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 21257 - 21185
Alignment:
Q  135 tcaatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggg 207  Q
    ||||||||||  ||||| |||||||||||||||||||||||  |||||||  ||| ||||| |||| ||||||    
T  21257 tcaatacttaaggggcaattttgtagtttatttagttaggagaccaaaattacaatttcttgaaacatagggg 21185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 21408 - 21473
Alignment:
Q  57 aaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattgaaatgaggggccaaaact 124  Q
    ||||||||||| | |||||||||| |||| |||||||||| |||||||||| ||  ||||||||||||    
T  21408 aaataaatacatatgtggcgtccacgtcaactttgacttgatcaaaattgacat--ggggccaaaact 21473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 162266 - 162354
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||||||| ||||| || ||||| ||||||| ||||||  ||||||||| || ||||  || ||||| |||||||||||| |||||||    
T  162266 caatacttaaagggctgtattgtattttattttgttagggggccaaaatcacatcttcccaatacttaaggggccaaaactgctattaa 162354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 20183 - 20121
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| ||||| ||| || ||||||||| ||||||| |||| |||||||||||||    
T  20183 gttttgtattttaattagtaagggagtcaaaatcgctacttcttgaaacatagggggccaaaa 20121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 17710 - 17641
Alignment:
Q  155 ttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    ||||| ||||||| ||||||  | ||||||||||||||| | | ||| |||||||||||||| |||||||    
T  17710 ttgtattttattttgttagggtgtcaaaatcgcaacttcctgatactcagggggccaaaactgctattaa 17641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 151510 - 151560
Alignment:
Q  56 aaaataaatacacacgtggcgtccatgtcagctttgacttggtcaaaattg 106  Q
    |||| ||||||||||||||||| || |||||| ||||| ||||||||||||    
T  151510 aaaaaaaatacacacgtggcgttcacgtcagcattgacctggtcaaaattg 151560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 201232 - 201294
Alignment:
Q  152 gttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaa 214  Q
    |||||||| |||| |||||||||  || ||||||||||||||||| ||  |||||||||||||    
T  201232 gttttgtattttaattagttagggggctaaaatcgcaacttcttataatatagggggccaaaa 201294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 6698 - 6747
Alignment:
Q  180 aaaatcgcaacttcttaaaacttagggggccaaaactactattaaaccta 229  Q
    ||||||||||||| || ||||||||||||| |||||| ||||||| ||||    
T  6698 aaaatcgcaacttgttgaaacttagggggctaaaactgctattaagccta 6747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 32243 - 32320
Alignment:
Q  147 gggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttagggggccaaaactactattaa 224  Q
    |||| |||||||| |||| |||||||||  |||||||||||||||| |  |||  ||||||||||||| ||| |||||    
T  32243 gggctgttttgtattttaattagttagggggccaaaatcgcaacttttggaaagatagggggccaaaagtacaattaa 32320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 22881 - 22809
Alignment:
Q  136 caatacttagagggcagttttgtagtttatttagttaggaagccaaaatcgcaacttcttaaaacttaggggg 208  Q
    |||||| ||| |||| |||||||| |||| |||||||||   |||||||||||||||||  |||| |||||||    
T  22881 caatacatagggggctgttttgtattttaattagttaggggtccaaaatcgcaacttctagaaacataggggg 22809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University