View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2242R-Insertion-6 (Length: 725)

Name: NF2242R-Insertion-6
Description: NF2242R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2242R-Insertion-6
NF2242R-Insertion-6
[»] chr5 (59 HSPs)
chr5 (126-700)||(43254179-43254760)
chr5 (249-366)||(43258556-43258675)
chr5 (126-227)||(22981117-22981218)
chr5 (126-231)||(23115976-23116081)
chr5 (126-227)||(24886411-24886512)
chr5 (126-227)||(35511232-35511333)
chr5 (126-227)||(38527987-38528088)
chr5 (127-226)||(31786397-31786496)
chr5 (126-229)||(42343045-42343148)
chr5 (128-226)||(12910681-12910779)
chr5 (126-227)||(22255506-22255607)
chr5 (126-226)||(39573135-39573235)
chr5 (9-89)||(43241055-43241135)
chr5 (133-227)||(23954552-23954646)
chr5 (126-227)||(19120183-19120284)
chr5 (126-227)||(22019947-22020048)
chr5 (126-227)||(25889694-25889795)
chr5 (126-227)||(33908556-33908657)
chr5 (126-230)||(8437289-8437393)
chr5 (126-230)||(22973829-22973933)
chr5 (129-215)||(699477-699563)
chr5 (126-216)||(8741646-8741736)
chr5 (126-228)||(31705361-31705463)
chr5 (126-223)||(2888199-2888296)
chr5 (126-215)||(15992302-15992391)
chr5 (126-223)||(25669900-25669997)
chr5 (126-227)||(40133709-40133810)
chr5 (126-229)||(17157779-17157882)
chr5 (126-229)||(25500674-25500777)
chr5 (126-227)||(26269133-26269234)
chr5 (126-227)||(27330628-27330729)
chr5 (126-227)||(28416301-28416402)
chr5 (126-227)||(36867086-36867187)
chr5 (126-227)||(43308410-43308511)
chr5 (126-229)||(27318236-27318340)
chr5 (126-225)||(32563464-32563563)
chr5 (126-204)||(7208637-7208715)
chr5 (126-232)||(14409086-14409192)
chr5 (129-210)||(35504692-35504773)
chr5 (126-227)||(35934220-35934321)
chr5 (126-226)||(9200548-9200648)
chr5 (126-230)||(15724812-15724916)
chr5 (126-225)||(5837879-5837978)
chr5 (127-209)||(7693546-7693628)
chr5 (126-204)||(14919312-14919390)
chr5 (126-228)||(36860748-36860850)
chr5 (126-195)||(35826268-35826337)
chr5 (126-209)||(30969091-30969175)
chr5 (126-224)||(5830216-5830314)
chr5 (126-228)||(8467050-8467152)
chr5 (610-699)||(22668823-22668912)
chr5 (245-354)||(43225804-43225917)
chr5 (126-225)||(13956116-13956213)
chr5 (184-231)||(11898197-11898244)
chr5 (177-227)||(34853845-34853895)
chr5 (12-86)||(43235754-43235828)
chr5 (180-220)||(12080405-12080445)
chr5 (172-227)||(1428923-1428978)
chr5 (180-225)||(21321087-21321132)
[»] chr7 (51 HSPs)
chr7 (394-699)||(11896475-11896783)
chr7 (126-225)||(24212041-24212140)
chr7 (126-228)||(35353407-35353509)
chr7 (126-229)||(6546818-6546921)
chr7 (126-228)||(7335092-7335194)
chr7 (126-224)||(9355590-9355688)
chr7 (126-228)||(38258878-38258980)
chr7 (126-227)||(18797626-18797727)
chr7 (126-227)||(31520502-31520603)
chr7 (126-227)||(37703259-37703360)
chr7 (126-229)||(15612518-15612621)
chr7 (126-227)||(26980605-26980706)
chr7 (126-227)||(29173821-29173922)
chr7 (126-221)||(31578831-31578926)
chr7 (126-228)||(17842344-17842446)
chr7 (126-227)||(8861584-8861685)
chr7 (126-227)||(10358975-10359076)
chr7 (126-227)||(26587853-26587954)
chr7 (126-227)||(30055826-30055927)
chr7 (126-226)||(32432751-32432851)
chr7 (126-210)||(46480907-46480991)
chr7 (126-228)||(12390409-12390511)
chr7 (133-227)||(21991933-21992027)
chr7 (126-224)||(23111491-23111589)
chr7 (126-228)||(37110173-37110275)
chr7 (128-224)||(44411304-44411400)
chr7 (389-696)||(22792704-22793014)
chr7 (126-205)||(37347320-37347399)
chr7 (126-229)||(41764837-41764940)
chr7 (394-696)||(25001581-25001886)
chr7 (126-227)||(4583218-4583319)
chr7 (130-218)||(10481908-10481996)
chr7 (133-231)||(15672514-15672614)
chr7 (126-195)||(22687530-22687599)
chr7 (126-227)||(37704481-37704582)
chr7 (126-228)||(48928057-48928159)
chr7 (126-195)||(25691337-25691406)
chr7 (126-195)||(32820846-32820915)
chr7 (126-226)||(27284043-27284145)
chr7 (126-199)||(32592996-32593068)
chr7 (126-191)||(43925394-43925459)
chr7 (402-638)||(24437085-24437324)
chr7 (126-204)||(5657264-5657343)
chr7 (126-197)||(34361967-34362040)
chr7 (138-227)||(44598978-44599066)
chr7 (126-182)||(11071502-11071558)
chr7 (153-229)||(12166215-12166291)
chr7 (182-231)||(8759575-8759624)
chr7 (180-228)||(4902657-4902705)
chr7 (126-158)||(12166042-12166074)
chr7 (162-227)||(33688053-33688118)
[»] chr3 (58 HSPs)
chr3 (394-665)||(49723076-49723350)
chr3 (126-225)||(20373025-20373124)
chr3 (126-226)||(39282967-39283067)
chr3 (126-228)||(4015774-4015876)
chr3 (129-231)||(21193925-21194027)
chr3 (129-227)||(40552019-40552117)
chr3 (126-228)||(48355256-48355358)
chr3 (126-227)||(3362570-3362671)
chr3 (126-227)||(37158023-37158124)
chr3 (126-227)||(37203383-37203484)
chr3 (389-696)||(27429752-27430063)
chr3 (126-220)||(1090008-1090102)
chr3 (126-239)||(33378533-33378646)
chr3 (126-226)||(22445826-22445926)
chr3 (126-229)||(21009559-21009662)
chr3 (126-227)||(22622478-22622579)
chr3 (126-227)||(26941020-26941121)
chr3 (126-227)||(46297522-46297623)
chr3 (126-227)||(53228912-53229013)
chr3 (126-225)||(47481838-47481937)
chr3 (126-221)||(54506123-54506218)
chr3 (125-227)||(11356918-11357020)
chr3 (126-223)||(11357145-11357242)
chr3 (126-227)||(14586440-14586541)
chr3 (126-225)||(42505837-42505936)
chr3 (126-228)||(2008254-2008356)
chr3 (126-227)||(29099661-29099763)
chr3 (126-227)||(36012454-36012556)
chr3 (126-227)||(52040682-52040783)
chr3 (126-204)||(33698468-33698546)
chr3 (126-227)||(43975652-43975753)
chr3 (126-203)||(44891812-44891889)
chr3 (126-210)||(24707892-24707976)
chr3 (133-227)||(11467132-11467226)
chr3 (126-209)||(44186295-44186378)
chr3 (126-223)||(4761412-4761509)
chr3 (141-237)||(35844577-35844673)
chr3 (126-193)||(22451283-22451350)
chr3 (126-228)||(51212536-51212632)
chr3 (126-192)||(50475133-50475199)
chr3 (126-195)||(7327274-7327343)
chr3 (126-199)||(40936288-40936361)
chr3 (129-203)||(3654983-3655058)
chr3 (126-228)||(24488720-24488823)
chr3 (133-203)||(29164124-29164194)
chr3 (126-227)||(32373785-32373885)
chr3 (126-204)||(25580054-25580132)
chr3 (165-226)||(34133312-34133373)
chr3 (126-164)||(38592013-38592051)
chr3 (129-206)||(27480139-27480216)
chr3 (172-230)||(13498678-13498736)
chr3 (180-242)||(42663971-42664033)
chr3 (156-226)||(45174819-45174889)
chr3 (180-221)||(5125556-5125597)
chr3 (172-227)||(38592046-38592101)
chr3 (126-164)||(34133250-34133288)
chr3 (153-195)||(43348556-43348598)
chr3 (182-223)||(54607984-54608025)
[»] chr8 (44 HSPs)
chr8 (126-227)||(37970285-37970386)
chr8 (126-227)||(43643361-43643462)
chr8 (126-227)||(5299712-5299813)
chr8 (126-227)||(16446641-16446742)
chr8 (126-227)||(35859257-35859358)
chr8 (126-226)||(41362745-41362845)
chr8 (126-228)||(7890722-7890824)
chr8 (126-225)||(23854200-23854298)
chr8 (126-227)||(1149398-1149499)
chr8 (126-227)||(34895285-34895386)
chr8 (126-226)||(31933653-31933753)
chr8 (126-224)||(466155-466253)
chr8 (126-228)||(8803581-8803683)
chr8 (126-224)||(34951826-34951924)
chr8 (126-228)||(38644301-38644403)
chr8 (126-227)||(4132452-4132553)
chr8 (126-203)||(35459501-35459578)
chr8 (126-221)||(1953760-1953855)
chr8 (126-228)||(1205250-1205352)
chr8 (126-202)||(12587905-12587981)
chr8 (126-231)||(16223186-16223294)
chr8 (126-204)||(44869820-44869898)
chr8 (126-227)||(30654349-30654449)
chr8 (126-227)||(33198125-33198226)
chr8 (528-699)||(18621374-18621545)
chr8 (136-229)||(10554968-10555062)
chr8 (126-227)||(11727347-11727449)
chr8 (126-195)||(27082636-27082705)
chr8 (126-222)||(18259402-18259498)
chr8 (126-227)||(33906535-33906634)
chr8 (127-193)||(24823194-24823260)
chr8 (127-207)||(40862743-40862824)
chr8 (126-231)||(6098275-6098380)
chr8 (126-228)||(12876433-12876535)
chr8 (126-227)||(36694732-36694833)
chr8 (126-206)||(43025997-43026078)
chr8 (155-227)||(13307931-13308003)
chr8 (156-227)||(41910824-41910895)
chr8 (165-226)||(9864533-9864594)
chr8 (126-221)||(39098891-39098986)
chr8 (182-222)||(1872582-1872622)
chr8 (126-157)||(1149756-1149787)
chr8 (180-227)||(30650899-30650946)
chr8 (126-164)||(9864471-9864509)
[»] chr4 (51 HSPs)
chr4 (126-227)||(25184437-25184538)
chr4 (126-227)||(34361277-34361378)
chr4 (126-228)||(879333-879435)
chr4 (126-231)||(7703833-7703938)
chr4 (126-227)||(49376291-49376392)
chr4 (126-230)||(19440431-19440535)
chr4 (126-228)||(6864359-6864461)
chr4 (126-227)||(33816302-33816403)
chr4 (126-227)||(35020817-35020918)
chr4 (126-227)||(36493475-36493576)
chr4 (129-226)||(3042946-3043043)
chr4 (126-215)||(23761395-23761484)
chr4 (126-227)||(32912365-32912466)
chr4 (126-231)||(46887940-46888045)
chr4 (126-227)||(47254064-47254165)
chr4 (126-229)||(19089237-19089340)
chr4 (126-231)||(25700838-25700943)
chr4 (126-227)||(26896412-26896513)
chr4 (126-227)||(28002772-28002873)
chr4 (126-231)||(30002423-30002528)
chr4 (126-231)||(37775982-37776087)
chr4 (126-230)||(32579770-32579874)
chr4 (126-210)||(39400332-39400416)
chr4 (126-229)||(55240889-55240992)
chr4 (126-228)||(4598306-4598408)
chr4 (126-227)||(23431879-23431980)
chr4 (126-227)||(29583986-29584087)
chr4 (126-230)||(50765044-50765148)
chr4 (126-227)||(4205308-4205409)
chr4 (126-203)||(7152014-7152091)
chr4 (126-227)||(17272288-17272389)
chr4 (126-227)||(37663527-37663628)
chr4 (126-227)||(38012586-38012687)
chr4 (126-194)||(1815625-1815693)
chr4 (126-210)||(33341722-33341806)
chr4 (128-227)||(37288054-37288154)
chr4 (130-221)||(32592412-32592503)
chr4 (126-204)||(50697566-50697644)
chr4 (126-229)||(4933996-4934100)
chr4 (126-226)||(9139553-9139653)
chr4 (126-201)||(35025379-35025453)
chr4 (126-228)||(5047751-5047853)
chr4 (126-227)||(17168037-17168138)
chr4 (126-227)||(17173614-17173715)
chr4 (127-227)||(42200056-42200155)
chr4 (126-188)||(55477716-55477778)
chr4 (126-195)||(46883932-46884001)
chr4 (137-225)||(27396949-27397037)
chr4 (130-185)||(34947923-34947978)
chr4 (182-223)||(14246531-14246572)
chr4 (180-223)||(47073065-47073108)
[»] chr1 (60 HSPs)
chr1 (126-227)||(10923047-10923148)
chr1 (126-231)||(34012133-34012238)
chr1 (126-229)||(46931730-46931833)
chr1 (126-227)||(32216375-32216476)
chr1 (126-228)||(2960068-2960170)
chr1 (126-231)||(19899519-19899624)
chr1 (126-227)||(23999668-23999769)
chr1 (126-227)||(48353862-48353963)
chr1 (128-227)||(32267356-32267455)
chr1 (126-227)||(11742123-11742224)
chr1 (126-227)||(14758352-14758453)
chr1 (126-231)||(27563656-27563761)
chr1 (128-228)||(10181761-10181861)
chr1 (126-225)||(15168416-15168515)
chr1 (126-229)||(27532735-27532837)
chr1 (126-229)||(47682247-47682350)
chr1 (126-227)||(8222447-8222549)
chr1 (129-226)||(30254746-30254843)
chr1 (126-210)||(27763082-27763166)
chr1 (126-204)||(1547591-1547669)
chr1 (126-224)||(9902812-9902910)
chr1 (126-227)||(3535243-3535344)
chr1 (126-231)||(15752349-15752454)
chr1 (126-227)||(37451605-37451706)
chr1 (126-206)||(28564559-28564639)
chr1 (126-229)||(22171031-22171134)
chr1 (126-221)||(38823534-38823629)
chr1 (126-236)||(47279509-47279620)
chr1 (126-224)||(4330601-4330699)
chr1 (126-228)||(21289920-21290022)
chr1 (126-227)||(31962936-31963038)
chr1 (133-227)||(48620916-48621010)
chr1 (126-210)||(7078835-7078919)
chr1 (443-646)||(11777562-11777764)
chr1 (129-227)||(15383256-15383355)
chr1 (129-224)||(27266959-27267053)
chr1 (126-228)||(16415966-16416068)
chr1 (126-210)||(39393704-39393788)
chr1 (126-204)||(31621326-31621405)
chr1 (126-227)||(33725366-33725468)
chr1 (126-206)||(28769973-28770053)
chr1 (126-224)||(51129179-51129275)
chr1 (126-195)||(238300-238369)
chr1 (126-227)||(1359691-1359791)
chr1 (126-190)||(3309473-3309538)
chr1 (126-194)||(27227273-27227341)
chr1 (581-639)||(11778273-11778331)
chr1 (162-227)||(38759846-38759911)
chr1 (126-195)||(42721356-42721425)
chr1 (126-188)||(25160952-25161015)
chr1 (180-229)||(26970858-26970907)
chr1 (126-182)||(30326751-30326808)
chr1 (180-223)||(7843122-7843165)
chr1 (133-168)||(18422971-18423006)
chr1 (180-223)||(28013040-28013083)
chr1 (180-223)||(47555092-47555135)
chr1 (180-222)||(42663232-42663274)
chr1 (182-223)||(422322-422363)
chr1 (181-222)||(10598223-10598264)
chr1 (126-203)||(41926476-41926553)
[»] chr2 (39 HSPs)
chr2 (126-227)||(18494059-18494160)
chr2 (126-227)||(31862176-31862277)
chr2 (126-226)||(43648024-43648124)
chr2 (126-228)||(19289100-19289202)
chr2 (126-228)||(41961164-41961266)
chr2 (126-229)||(19424418-19424521)
chr2 (126-227)||(33660155-33660256)
chr2 (126-230)||(35959216-35959320)
chr2 (128-227)||(29241923-29242022)
chr2 (126-227)||(4167246-4167347)
chr2 (126-225)||(44913991-44914090)
chr2 (140-227)||(45328028-45328114)
chr2 (129-227)||(2325156-2325254)
chr2 (126-227)||(11366158-11366259)
chr2 (126-227)||(41465825-41465926)
chr2 (126-227)||(4763955-4764057)
chr2 (126-204)||(7006739-7006817)
chr2 (126-204)||(43770649-43770727)
chr2 (126-227)||(26357901-26358002)
chr2 (126-222)||(33709015-33709111)
chr2 (132-208)||(39167166-39167242)
chr2 (126-225)||(3177263-3177362)
chr2 (126-204)||(5881853-5881931)
chr2 (129-226)||(33902341-33902439)
chr2 (126-227)||(19500695-19500794)
chr2 (126-227)||(27349731-27349827)
chr2 (126-210)||(31570529-31570613)
chr2 (129-188)||(33550800-33550859)
chr2 (126-199)||(37906034-37906108)
chr2 (126-196)||(13711783-13711853)
chr2 (126-225)||(41051083-41051179)
chr2 (131-231)||(17071544-17071646)
chr2 (131-231)||(17053904-17054005)
chr2 (126-203)||(18257340-18257417)
chr2 (126-195)||(41463400-41463469)
chr2 (182-223)||(6357160-6357201)
chr2 (162-227)||(36642296-36642361)
chr2 (158-210)||(4263704-4263756)
chr2 (180-223)||(18514400-18514443)
[»] scaffold0884 (1 HSPs)
scaffold0884 (523-699)||(698-874)
[»] chr6 (19 HSPs)
chr6 (126-226)||(1946159-1946260)
chr6 (126-227)||(6090941-6091042)
chr6 (126-229)||(20768406-20768509)
chr6 (126-227)||(3879698-3879799)
chr6 (126-227)||(5627716-5627817)
chr6 (126-225)||(7054533-7054632)
chr6 (139-229)||(7234789-7234879)
chr6 (126-204)||(33892794-33892872)
chr6 (133-215)||(8513552-8513634)
chr6 (581-696)||(4928513-4928629)
chr6 (126-204)||(29182485-29182563)
chr6 (133-206)||(33619164-33619237)
chr6 (126-227)||(4318575-4318682)
chr6 (128-183)||(33724062-33724117)
chr6 (126-188)||(21016916-21016978)
chr6 (133-192)||(6089227-6089286)
chr6 (180-227)||(6613657-6613704)
chr6 (175-231)||(21016722-21016778)
chr6 (615-696)||(3340322-3340404)
[»] scaffold0008 (1 HSPs)
scaffold0008 (132-231)||(267606-267705)
[»] scaffold0291 (1 HSPs)
scaffold0291 (126-227)||(8211-8312)
[»] scaffold0022 (1 HSPs)
scaffold0022 (126-227)||(145775-145876)
[»] scaffold0061 (1 HSPs)
scaffold0061 (126-227)||(44280-44381)
[»] scaffold0017 (1 HSPs)
scaffold0017 (126-227)||(154406-154507)
[»] scaffold0318 (1 HSPs)
scaffold0318 (126-226)||(12233-12332)
[»] scaffold0002 (4 HSPs)
scaffold0002 (126-191)||(452-517)
scaffold0002 (126-193)||(408223-408290)
scaffold0002 (126-228)||(93860-93961)
scaffold0002 (175-230)||(690-745)
[»] scaffold0057 (1 HSPs)
scaffold0057 (394-498)||(77747-77853)
[»] scaffold0312 (1 HSPs)
scaffold0312 (182-223)||(8209-8250)


Alignment Details
Target: chr5 (Bit Score: 467; Significance: 0; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 467; E-Value: 0
Query Start/End: Original strand, 126 - 700
Target Start/End: Original strand, 43254179 - 43254760
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||    
T  43254179 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttccaaaaaagtcaatttcctgactgcaccatagaagctc 43254278  T
Q  226 ccataactaaattgtaagttttatttatttatttcgaaagcattgacaaatgt--agtatactcacaaatatgattcattttccaaacaaacttatacac 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  43254279 ccataactaaattgtaagttttatttatttatttcgaaagcattgacaaatgttgagtatactcacaaatatgattcattttccaaacaaacttatacac 43254378  T
Q  324 tagatgtttgttaagaattaattttaattttcactacattaaattgcaacaaagaagnnnnnnnn---gacaataaacaatagcttaacatttcataaaa 420  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||    
T  43254379 tagatgtttgttaagaattaattttaattttcactacattaaattgcaacaaagaagtttttttttttgacaataaacaatagcttaacatttcataaaa 43254478  T
Q  421 tagagag--ttacaagcagctagagttaactttgaaagggtattccccaacaattttgaagagccaatacaatagaaaaa-cctattaaaacaggatttg 517  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43254479 tagagagagttacaagcagctagagttaactttgaaagggtattccccaacaattttgaagagccaatacaatagaaaaaacctattaaaacaggatttg 43254578  T
Q  518 cagtacacctaaactttgaatacaaatatgataacttaaaccaaattccataagctagcaactcattcatcaacaacttccatcttctaatgctgataaa 617  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  43254579 c-gtacacctaaactttgaatacaaatatgagaacttaaaccaaattccataagctagcaactcattcatcaacaacttccatcttctaatgctgacaaa 43254677  T
Q  618 ggagatgtgagaatccaaagtcctttttcctatccaattacggatcatttcttctgcctcatcacgcacatttcgactacaca 700  Q
    |||||||||||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43254678 ggagatgtgagaattcagagtctttttttctatccaattacggatcatttcttctgcctcatcacgcacatttcgactacaca 43254760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 249 - 366
Target Start/End: Original strand, 43258556 - 43258675
Alignment:
Q  249 tttatttatttcgaaagcattgacaaatgt--agtatactcacaaatatgattcattttccaaacaaacttatacactagatgtttgttaagaattaatt 346  Q
    ||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||    
T  43258556 tttatttatttcgaaagcattgacaaatgttgagtatactcgcaaatatgattcattttccaatcaaacttatacactaaatgtttgttaagaattcatt 43258655  T
Q  347 ttaattttcactacattaaa 366  Q
    ||||||||||||||||||||    
T  43258656 ttaattttcactacattaaa 43258675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 22981117 - 22981218
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||| ||||||||||||||    
T  22981117 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttttaaaaagtcagtttcctgactgcaccatagaagctc 22981216  T
Q  226 cc 227  Q
    ||    
T  22981217 cc 22981218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 23116081 - 23115976
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||| |||| ||||| |||    
T  23116081 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcattttcctgacttcaccgtagaaactc 23115982  T
Q  226 ccataa 231  Q
    ||||||    
T  23115981 ccataa 23115976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 24886411 - 24886512
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||    
T  24886411 atcattaatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtcagtttcttgactgcaccataaaagctc 24886510  T
Q  226 cc 227  Q
    ||    
T  24886511 cc 24886512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 35511333 - 35511232
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| |||| |||||||||    
T  35511333 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttaaaaaagtcagtttcctgactgcaccgtagaagctc 35511234  T
Q  226 cc 227  Q
    ||    
T  35511233 cc 35511232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 38528088 - 38527987
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  38528088 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaaatcagtttcctgactgcaccgtagaagctc 38527989  T
Q  226 cc 227  Q
    ||    
T  38527988 cc 38527987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 127 - 226
Target Start/End: Complemental strand, 31786496 - 31786397
Alignment:
Q  127 tcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctcc 226  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| | |||||||||| ||||    
T  31786496 tcattaatcagtaatcaacaatttaaaaatgaatcaaacattaatatcaaaattaactttttcaaaaaagtcagtttcctgattgcaccatagaatctcc 31786397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 42343045 - 42343148
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||| ||||| |||| |||||||||    
T  42343045 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcagaaaagtcagtttcatgactgcaccgtagaagctc 42343144  T
Q  226 ccat 229  Q
    ||||    
T  42343145 ccat 42343148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 12910681 - 12910779
Alignment:
Q  128 cattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctcc 226  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  12910681 cattaatcagcaatcaacaatttaaaaatgaatcaaacattaagatcataattaacttttccaaaaaagtcagtttcctgactgcaccatagaagctcc 12910779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 22255506 - 22255607
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||  ||| |||||||||    
T  22255506 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttaaaaaaagtcagtttcctgactgtaccgtagaagctc 22255605  T
Q  226 cc 227  Q
    ||    
T  22255606 cc 22255607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 39573135 - 39573235
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| | ||| |||| |||||||||    
T  39573135 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtcagtttcataactgcaccgtagaagctc 39573234  T
Q  226 c 226  Q
    |    
T  39573235 c 39573235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 43241055 - 43241135
Alignment:
Q  9 atatgaagcaaattatgaaataatgaaaaatggaaattcctagcgcaagggtttggcatctaaatcaaattatgaaagcac 89  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43241055 atatgaagcaaattacgaaataatgaaaaatggaaattcctagcgcaagggtttggcatctaaatcaaattatgaaagcac 43241135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 133 - 227
Target Start/End: Complemental strand, 23954646 - 23954552
Alignment:
Q  133 atcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    |||| ||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23954646 atcattaatcaacaatttaaaaatgaattaaacattaagatcataattaactttttcaaaaaagtcagtttcctgactgcaccatagaagctccc 23954552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 19120183 - 19120284
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||| |||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  19120183 atcattaatcagtgatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaaaagtcagtttcatgactgcaccttagaagctc 19120282  T
Q  226 cc 227  Q
    ||    
T  19120283 cc 19120284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 22019947 - 22020048
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| ||||| |||| |||||| ||    
T  22019947 atcattaatcagtaatcaacaatttaaaaatgaatcaaatattaagattaaaattaactttttcaaaaaagtcagtttcatgactgcaccgtagaagttc 22020046  T
Q  226 cc 227  Q
    ||    
T  22020047 cc 22020048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 25889694 - 25889795
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || ||||||||||||||||||| || | |||||||||    
T  25889694 atcattaatcagtaatcaacaatttaaaaatgaattaaacattaagatcaaaattaacttttccagaaaagtcagtttcctgactgcatcgtagaagctc 25889793  T
Q  226 cc 227  Q
    ||    
T  25889794 cc 25889795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 33908556 - 33908657
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| |||| |||| ||||    
T  33908556 atcattaatcagcaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtcagttttctaactgcaccgtagatgctc 33908655  T
Q  226 cc 227  Q
    ||    
T  33908656 cc 33908657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 8437289 - 8437393
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||| ||| ||| | ||||||||||||||||||||||||||||||||||||||| || | |||| ||||    
T  8437289 atcattaatcagtaatcaacaatttaaaaatgaattaaatattaaaatcaaaattaactttttcaaaaaagtcagtttcctgactgcatcgtagatgctc 8437388  T
Q  226 ccata 230  Q
    |||||    
T  8437389 ccata 8437393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 22973933 - 22973829
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||| ||||||| |||||| |||||||||| ||     
T  22973933 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttaaaaaaaatcagttttctgactgcaccatagaaactt 22973834  T
Q  226 ccata 230  Q
    |||||    
T  22973833 ccata 22973829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 699477 - 699563
Alignment:
Q  129 attaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacacc 215  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||    
T  699477 attaatcagtaattaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttccaaaaaagtcagtttcctgactgcacc 699563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 8741736 - 8741646
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacacca 216  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||| |||||    
T  8741736 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtctgtttcatgactgcacca 8741646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 31705463 - 31705361
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||| |||| ||||| |||| ||||| |||    
T  31705463 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaactttttcaaaaaagtcaatttcttgactgcaccgtagaatctc 31705364  T
Q  226 cca 228  Q
    |||    
T  31705363 cca 31705361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 2888296 - 2888199
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagc 223  Q
    ||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||| ||| |||||| |||| |||||||    
T  2888296 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaagtcaattttctgactgcaccgtagaagc 2888199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 15992391 - 15992302
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacacc 215  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||| ||||    
T  15992391 atcattaatcagtaattaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtcagtttcatgactgcacc 15992302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 25669900 - 25669997
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagc 223  Q
    ||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||| |||||||| ||||| |||| |||||||    
T  25669900 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaaatcagtttcatgactgcaccgtagaagc 25669997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 40133709 - 40133810
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||| |||||| |||| |||||||||    
T  40133709 atcatgaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaattaactttttcaaaaaagtcaattttctgactgcaccgtagaagctc 40133808  T
Q  226 cc 227  Q
    ||    
T  40133809 cc 40133810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 17157882 - 17157779
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||| || |||||||||||||||||| |||| |||||  ||| |||||||||    
T  17157882 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaacttgactttttcaaaaaagtcaatttcttgactgtaccgtagaagctc 17157783  T
Q  226 ccat 229  Q
    ||||    
T  17157782 ccat 17157779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 25500777 - 25500674
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||| |||||||||||||||||||||| | | |||| ||||||||||||||||||||| |||||||| ||||| |||| |||||||||    
T  25500777 atcattaatcagtaattaacaatttaaaaatgaatcaaatactaagattaaaattaactttttcaaaaaaatcagtttcatgactgcaccgtagaagctc 25500678  T
Q  226 ccat 229  Q
    ||||    
T  25500677 ccat 25500674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 26269133 - 26269234
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||||||||||||| ||| |||| |||| |||||||||||||||| ||||||||||||| ||||| |||| ||||| |||    
T  26269133 atcattaatcagtaatcaacaatttaaaaatgaaccaatcattaagattaaaattaactttttcataaaagtcagtttcatgactgcaccgtagaaactc 26269232  T
Q  226 cc 227  Q
    ||    
T  26269233 cc 26269234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 27330628 - 27330729
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||| ||| |||||||||||||||||||||| |||| |||||||||||||||||| |||||| |||| ||||| |||| |||||||||    
T  27330628 atcattaatcagtaatgaacgatttaaaaatgaatcaaacattaagattaaaattaactttttcaaacaagtcaatttcatgactgcaccgtagaagctc 27330727  T
Q  226 cc 227  Q
    ||    
T  27330728 cc 27330729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 28416402 - 28416301
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||  ||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||| ||| ||||| |||| |||||||||    
T  28416402 atcattaatcaacaatcaacaatttaaaaaagaatcaaacattaagattaaaattaactttttcaaaaaagtcagcttcatgactgcaccgtagaagctc 28416303  T
Q  226 cc 227  Q
    ||    
T  28416302 cc 28416301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 36867086 - 36867187
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||| |||||||||| ||| |||||| |||| |||||||||    
T  36867086 atcatgaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaattaacttttttaaaaaagtcaattttctgactgcaccgtagaagctc 36867185  T
Q  226 cc 227  Q
    ||    
T  36867186 cc 36867187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 43308511 - 43308410
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||| ||||||||||||||||| |||||||| | | | ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||    
T  43308511 atcattaatcagaaatcaacaatttaaaaacgaatcaaatactaaaatcaaaattaactttttcaaaaaagtcagtttcctaactgcaccattgaagctc 43308412  T
Q  226 cc 227  Q
    ||    
T  43308411 cc 43308410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 27318340 - 27318236
Alignment:
Q  126 atcattaatcagtaatcaacaattt-aaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagct 224  Q
    |||||||||||  |||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||||||||| |||||| |||||||||| ||    
T  27318340 atcattaatcaaaaatcaacaattttaaaaatgaatcaaacattaagattaaaattaacttttttaaaaaagtcagttttctgactgcaccatagaaact 27318241  T
Q  225 cccat 229  Q
    |||||    
T  27318240 cccat 27318236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 32563464 - 32563563
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||| ||| |||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||| | ||| |||| |||||||||    
T  32563464 atcattaatcagcaattaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaagtcagtttcataactgcaccgtagaagctc 32563563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 7208715 - 7208637
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||| |||||||||||||||    
T  7208715 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaactttttaaaaaaagtcagtttc 7208637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 14409192 - 14409086
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||| |||| ||||||||||||||||||||||| |||||| | || |||||||| |||||||||||| |||||||||||||| |||| |||||||||    
T  14409192 atcattattcagcaatcaacaatttaaaaatgaatcgaacattaaaattaaaattaaatttttcaaaaaaatcagtttcctgactgcaccgtagaagctc 14409093  T
Q  226 ccataac 232  Q
    || ||||    
T  14409092 ccttaac 14409086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 35504692 - 35504773
Alignment:
Q  129 attaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgact 210  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||| |||| |||||    
T  35504692 attaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattgactttttcaaaaaagtcaatttcttgact 35504773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 35934220 - 35934321
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||||||||||||||| |||||||| | ||| |||| ||||| |||    
T  35934220 atcattaatcagtaatcaacaatttaaaaatgattcaaacattaaaattaaaattaactttttcaaaaaaatcagtttcataactgcaccgtagaaactc 35934319  T
Q  226 cc 227  Q
    ||    
T  35934320 cc 35934321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 9200548 - 9200648
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||||||||||||||||||  || | || |||||||| |||||||||||| |||||||| ||||| |||| |||||||||    
T  9200548 atcattaatcagtaatcaacaatttaaaaatgaatcaaaatttaaaattaaaattaattttttcaaaaaaatcagtttcatgactgcaccgtagaagctc 9200647  T
Q  226 c 226  Q
    |    
T  9200648 c 9200648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 15724812 - 15724916
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |  | ||||||||||||||||||||| | |||||| ||||| |||| || ||||||    
T  15724812 atcattaatcaataatcaacaatttaaaaatgaatcaaacattaaagttaaaattaactttttcaaaaaaattagtttcatgacttcaccttaaaagctc 15724911  T
Q  226 ccata 230  Q
    |||||    
T  15724912 ccata 15724916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 5837879 - 5837978
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||| |||||||||||||||||||||||||| |||| | || ||||||||| |||||||||||||||||||  ||||| ||||| ||||||||    
T  5837879 atcattaatcaataatcaacaatttaaaaatgaatcaatcattaaaattaaaattaaccttttcaaaaaagtcagtttgatgactgcaccagagaagctc 5837978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 127 - 209
Target Start/End: Original strand, 7693546 - 7693628
Alignment:
Q  127 tcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgac 209  Q
    |||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||| | ||||||||||||| ||||    
T  7693546 tcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttttagaaaagtcagtttcatgac 7693628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 14919390 - 14919312
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttc 204  Q
    |||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  14919390 atcattaatcagaaatctaaaatttaaaaatgaatcaaacattaagatcaaaattaattttttcaaaaaagtcagtttc 14919312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 36860748 - 36860850
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||| ||| |||||||||||||||||||||||||||| |||| |||| |||||||||||||| |||||||||| ||| |||||| |||| ||||||| |    
T  36860748 atcatgaattagtaatcaacaatttaaaaatgaatcaagcattaagattaaaattaacttttttaaaaaagtcaattttctgactgcaccgtagaagcac 36860847  T
Q  226 cca 228  Q
    |||    
T  36860848 cca 36860850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 35826337 - 35826268
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaa 195  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  35826337 atcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttaaaaaaa 35826268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 30969175 - 30969091
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaact-ttttcaaaaaagtcagtttcctgac 209  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | || |||||||||| |||| ||||||||||||||| ||||    
T  30969175 atcattaatcagtaatccacaatttaaaaatgaatcaaacattaaaattaaaattaacttttttaaaaaaagtcagtttcatgac 30969091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 224
Target Start/End: Original strand, 5830216 - 5830314
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatg-aatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagct 224  Q
    |||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||| ||||| |||| |||| ||| |||||| |||| ||||||||    
T  5830216 atcattaatcagtaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaattaac-ttttccaaaatgtcaattttctgactgcaccgtagaagct 5830314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 8467050 - 8467152
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||| ||||||||||| ||||||||||||||||||||| | |  |||||||||||||| |||||| |||||||  ||| | |||||||||| |||    
T  8467050 atcattaattagtaatcaacagtttaaaaatgaatcaaacattaaaaataaaattaactttttaaaaaaaatcagtttaatgattgcaccatagaaactc 8467149  T
Q  226 cca 228  Q
    |||    
T  8467150 cca 8467152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 610 - 699
Target Start/End: Original strand, 22668823 - 22668912
Alignment:
Q  610 ctgataaaggagatgtgagaatccaaagtcctttttcctatccaattacggatcatttcttctgcctcatcacgcacatttcgactacac 699  Q
    |||| |||||||||||||||||||| |||| ||||||||||||| |||| ||||||||||||  || |||||||| |||||| |||||||    
T  22668823 ctgacaaaggagatgtgagaatccagagtcttttttcctatccagttacagatcatttcttcaaccacatcacgcccatttctactacac 22668912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 245 - 354
Target Start/End: Original strand, 43225804 - 43225917
Alignment:
Q  245 tttatttatttatttcgaaagcattgacaaatgt--agt---atactcacaaatatgattcattttccaaacaaacttatacactagatgtttgttaaga 339  Q
    |||||||||||||||||| |||||||||||||||  |||   |||||||||||||||||||||||  ||| ||||| ||||||||| || ||||| ||||    
T  43225804 tttatttatttatttcgatagcattgacaaatgttgagttgcatactcacaaatatgattcatttatcaatcaaac-tatacactaaatatttgtcaaga 43225902  T
Q  340 attaattttaatttt 354  Q
    ||| |||||||||||    
T  43225903 attgattttaatttt 43225917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 13956213 - 13956116
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||||||   |   ||||||||| | |||||||||||| ||||||||||| |||| || |||||| |||| |||||||||    
T  13956213 atcattaatcagtaatcaacaatttaactttt--tcaaacattaaaatcaaaattaacattttcaaaaaaatcagctttctgactgcaccgtagaagctc 13956116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 11898197 - 11898244
Alignment:
Q  184 tttttcaaaaaagtcagtttcctgactacaccatagaagctcccataa 231  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||    
T  11898197 tttttcaaaaaagtcagtttcctgactgcaccgtagaagctcccataa 11898244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 34853895 - 34853845
Alignment:
Q  177 aattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||||||||||    
T  34853895 aattaacttttccaaaaaagtcagtttcccgactgcaccatagaagctccc 34853845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 43235754 - 43235828
Alignment:
Q  12 tgaagcaaattatgaaataatgaaaaatggaaattcctagcgcaagggtttggcatctaaatcaaattatgaaag 86  Q
    |||||||||||| ||||||| ||||||||||||||| |||   ||  ||||| ||||||||||||||||||||||    
T  43235754 tgaagcaaattaggaaataaagaaaaatggaaattcttagtttaaatgtttgacatctaaatcaaattatgaaag 43235828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 12080445 - 12080405
Alignment:
Q  180 taactttttcaaaaaagtcagtttcctgactacaccataga 220  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  12080445 taactttttcaaaaaagtcaatttcctgactacaccataga 12080405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 1428978 - 1428923
Alignment:
Q  172 atcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    |||| ||||||||||| |||||||||||||||| ||| | ||||||||||||||||    
T  1428978 atcataattaacttttccaaaaaagtcagtttcatgagtgcaccatagaagctccc 1428923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 21321087 - 21321132
Alignment:
Q  180 taactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||| ||| || ||||||||||||||    
T  21321087 taactttttcaaaaaagtcagttttctggctgcaccatagaagctc 21321132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 5e-67; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 394 - 699
Target Start/End: Complemental strand, 11896783 - 11896475
Alignment:
Q  394 taaacaatagcttaacatttcataaaatagagagt--tacaagcagctagagttaactttgaaagggtattccccaacaattttgaagagccaatacaat 491  Q
    ||||||||||||||||||||||||||| | ||| |  ||||| ||||||| |||||| ||||| ||||||| ||||| |||||||||||||||||||||     
T  11896783 taaacaatagcttaacatttcataaaacatagaatattacaaacagctagtgttaacattgaaggggtatttcccaataattttgaagagccaatacaag 11896684  T
Q  492 agaaaaa-cctattaaaacaggatttgcagtacacctaaactttgaatacaaatatgataacttaaaccaaattccataagctagcaactcattcatcaa 590  Q
    ||||||| |||| ||||  | |||||||| ||||||||||||||| | |||| ||||| || |||| ||||||| ||||| ||| || | |||  |||||    
T  11896683 agaaaaagcctactaaattatgatttgcaatacacctaaactttggagacaagtatgagaatttaagccaaattacataacctaacaccccatctatcaa 11896584  T
Q  591 caacttccatcttctaatgctgataaaggagatgtgagaatccaaagtcctttttcctatccaattacggatcatttcttctgcctcatcacgcacattt 690  Q
    ||||||||||||||||   |||| |||||||||||||||||||  |||| ||||||||||||| |||||||||||||||||  || |||||||| |||||    
T  11896583 caacttccatcttctataactgacaaaggagatgtgagaatcctgagtcttttttcctatccagttacggatcatttcttcaaccacatcacgcccattt 11896484  T
Q  691 cgactacac 699  Q
    |||||||||    
T  11896483 cgactacac 11896475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 24212041 - 24212140
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  24212041 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctc 24212140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 35353407 - 35353509
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  35353407 atcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccttagaagctc 35353506  T
Q  226 cca 228  Q
    |||    
T  35353507 cca 35353509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 6546818 - 6546921
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  6546818 atcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaaaagtcagtttcatgactgcaccgtagaagctc 6546917  T
Q  226 ccat 229  Q
    ||||    
T  6546918 ccat 6546921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 7335092 - 7335194
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  7335092 atcattaatcagaaatcaataatttaaaaatgaatcaaacattaagatcaaaattaattttttcaaaaaagtcaatttcctgactgcaccatagaagctc 7335191  T
Q  226 cca 228  Q
    |||    
T  7335192 cca 7335194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 126 - 224
Target Start/End: Complemental strand, 9355688 - 9355590
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagct 224  Q
    ||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  9355688 atcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagtttcctgcctgcaccatagaagct 9355590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 38258878 - 38258980
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||| |||||| |||| |||||||||    
T  38258878 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaaatcagttttctgactgcaccgtagaagctc 38258977  T
Q  226 cca 228  Q
    |||    
T  38258978 cca 38258980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 18797626 - 18797727
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||| || |||| ||||||    
T  18797626 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagttttctgactgcatcataaaagctc 18797725  T
Q  226 cc 227  Q
    ||    
T  18797726 cc 18797727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 31520603 - 31520502
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||| ||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  31520603 atcattaatccgtaattaacaatttaaaaatgaatcaaacattaagatcataattaactttttcaaaaaagtcagtttcctaactgcaccatagaagctc 31520504  T
Q  226 cc 227  Q
    ||    
T  31520503 cc 31520502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 37703360 - 37703259
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||    
T  37703360 atcattaatcaataatcaacaatttaaaaatgaattaaacattaagatcaaaattaactttttcaaaaaagtcaatttactgactgcaccatagaagctc 37703261  T
Q  226 cc 227  Q
    ||    
T  37703260 cc 37703259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 15612621 - 15612518
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||||| ||||| |||| |||||||||    
T  15612621 atcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttaaaaaaagtcagtttcatgactgcaccgtagaagctc 15612522  T
Q  226 ccat 229  Q
    ||||    
T  15612521 ccat 15612518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 26980605 - 26980706
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||| ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  26980605 atcattaatcggtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaaaagtcagtttcatgactgcaccttagaagctc 26980704  T
Q  226 cc 227  Q
    ||    
T  26980705 cc 26980706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 29173821 - 29173922
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||| || | |||||||||    
T  29173821 atcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtcagttttctgactgcatcgtagaagctc 29173920  T
Q  226 cc 227  Q
    ||    
T  29173921 cc 29173922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 31578926 - 31578831
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaa 221  Q
    ||||||||||| ||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31578926 atcattaatcaataatcaataatttaaaaatgaatcaaacaataaaatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccatagaa 31578831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 17842446 - 17842344
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||| ||||||||||| |||| ||||| |||| |||||||||    
T  17842446 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttccaaaaaagtcaatttcttgactgcaccgtagaagctc 17842347  T
Q  226 cca 228  Q
    |||    
T  17842346 cca 17842344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 8861584 - 8861685
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||| | ||| |||| | |||||||    
T  8861584 atcattaatcagtaatcaacaatttaaaaatgaatcaaacactaagattaaaattaactttttcaaaaaagtcagtttcatcactgcaccgttgaagctc 8861683  T
Q  226 cc 227  Q
    ||    
T  8861684 cc 8861685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 10359076 - 10358975
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||| | ||| |||| |||||||||    
T  10359076 atcattaatcaataatcaacaatttaaaaatgaatcaaacattatgatcaaaattaactttttcaaaaaagttagtttcttaactgcaccgtagaagctc 10358977  T
Q  226 cc 227  Q
    ||    
T  10358976 cc 10358975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 26587954 - 26587853
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||| ||| | | || |||||||||    
T  26587954 atcattaatcagtaatcaacaatttaaaaataaatcaaacattaagattaaaattaactttttcaaaaaagtcagtttcatgattgcgccgtagaagctc 26587855  T
Q  226 cc 227  Q
    ||    
T  26587854 cc 26587853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 30055826 - 30055927
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||||||||||||||||| | || | ||||||||||||||| |||||||||||| |||||||||| |||| |||||||||    
T  30055826 atcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaactttatcaaaaaagtcaatttcctgactgcaccgtagaagctc 30055925  T
Q  226 cc 227  Q
    ||    
T  30055926 cc 30055927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 32432751 - 32432851
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||| ||||| ||||||||||||||||||||||||||||||| |||| |||| ||||||||| ||||||||||||||||||||| |||| |||||||||    
T  32432751 atcatgaatcaataatcaacaatttaaaaatgaatcaaacattaagattaaaagtaacttttttaaaaaagtcagtttcctgactgcaccgtagaagctc 32432850  T
Q  226 c 226  Q
    |    
T  32432851 c 32432851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 46480991 - 46480907
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgact 210  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  46480991 atcattaatcagtaatcaacaatttaaaaataaataaaacattaagatcataattaactttttcaaaaaagtcagtttcctgact 46480907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 12390511 - 12390409
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||  ||||||||||||||||  ||||||| |||||||||||||||||| ||||||||||| |||||||||| |||| |||||||||    
T  12390511 atcattaatcagtaattgacaatttaaaaatgaaataaacattaagatcaaaattaacttttccaaaaaagtcaatttcctgacttcaccgtagaagctc 12390412  T
Q  226 cca 228  Q
    |||    
T  12390411 cca 12390409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 21991933 - 21992027
Alignment:
Q  133 atcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    |||| ||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||| ||| |||||| |||||||||||    
T  21991933 atcattaatcaacaatttaaaaatgaatcaaacattaagattaaaattaaccttttcaaaaaagtcagtttcatgattacaccgtagaagctccc 21992027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 126 - 224
Target Start/End: Original strand, 23111491 - 23111589
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagct 224  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||| ||||||  ||| ||||||||    
T  23111491 atcataaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaagttaacttttttaaaaaagtcagttttctgactgtaccgtagaagct 23111589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 37110173 - 37110275
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||| ||||||| ||| |||| ||||| |||| |||||||||    
T  37110173 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttccaaaaaaatcaatttcttgactgcaccgtagaagctc 37110272  T
Q  226 cca 228  Q
    |||    
T  37110273 cca 37110275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 128 - 224
Target Start/End: Complemental strand, 44411400 - 44411304
Alignment:
Q  128 cattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagct 224  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||| ||| ||||||||| |||||||||||| ||||||| |||||    
T  44411400 cattaatcagtaatcaacaatttaaaaatgaatgaaacattaagatcataattaacctttccaaaaaagttagtttcctgactgcaccatataagct 44411304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 389 - 696
Target Start/End: Original strand, 22792704 - 22793014
Alignment:
Q  389 gacaataaacaatagcttaacatttcataaaatagagagt--tacaagcagctagagttaactttgaaagggtattccccaacaattttgaagagccaat 486  Q
    |||| ||||||| ||||||||||||||||||| | ||| |  ||||  || |||| ||| || ||||| ||  |||| |||||||  ||||||||  |||    
T  22792704 gacagtaaacaagagcttaacatttcataaaacatagaatattacatccaactagtgttgacattgaagggacattctccaacaaacttgaagagttaat 22792803  T
Q  487 acaatagaaaaa-cctattaaaacaggatttgcagtacacctaaactttgaatacaaatatgataacttaaaccaaattccataagctagcaactcattc 585  Q
    |||| ||||| | |||| |||  || ||||| || ||||| ||||||||| | |||||||||| || ||  | || | | || || ||| |||  |||||    
T  22792804 acaagagaaatagcctactaattcatgatttacaatacacataaactttgtagacaaatatgagaaatttgatcataattcacaacctaacaatccattc 22792903  T
Q  586 atcaacaacttccatcttctaatgctgataaaggagatgtgagaatccaaagtcctttttcctatccaattacggatcatttcttctgcctcatcacgca 685  Q
    ||||||| |||||||||||||| | ||| ||||||||| ||||||||||||||| ||||||||||||| |||||||| |||| ||  || ||| ||| ||    
T  22792904 atcaacatcttccatcttctaaaggtgacaaaggagatatgagaatccaaagtcttttttcctatccagttacggataatttttttggcttcaccacaca 22793003  T
Q  686 catttcgacta 696  Q
    |||||||||||    
T  22793004 catttcgacta 22793014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 37347320 - 37347399
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcc 205  Q
    |||||||||| ||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  37347320 atcattaatccgtaattaacaatttaaaaatgaatcaaacattaagatcataattaactttttcaaaaaagtcagtttcc 37347399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 41764940 - 41764837
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||| ||||||||||||||||||||| | |||||| |||||||||||||| ||||||||||||||| ||||| |||| |||| ||||| |||    
T  41764940 atcattaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaatttcccgactccaccgtagaaactc 41764841  T
Q  226 ccat 229  Q
    ||||    
T  41764840 ccat 41764837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 394 - 696
Target Start/End: Original strand, 25001581 - 25001886
Alignment:
Q  394 taaacaatagcttaacatttcataaaatagagagt--tacaagcagctagagttaactttgaaagggtattccccaacaattttgaagagccaatacaat 491  Q
    |||||||||||||||||||||||||||  |||| |  ||||| ||||||| ||| || ||| | ||  ||||||||| ||| || ||||  ||||||||     
T  25001581 taaacaatagcttaacatttcataaaaccgagaatattacaaccagctagtgttgacattggagggacattccccaaaaatcttaaagattcaatacaag 25001680  T
Q  492 agaaaaa-cctattaaaacaggatttgcagtacacctaaactttgaatacaaatatgataacttaaaccaaattccataagctagcaactcattcatcaa 590  Q
    ||||| | |||| || | || |||| ||| ||||| ||||||||| | ||||||||||||| || ||||| | |  | || ||| |||  | ||||||||    
T  25001681 agaaatagcctactagatcatgattcgcaatacacataaactttgtagacaaatatgataaattcaaccataatttacaacctaacaatcccttcatcaa 25001780  T
Q  591 caacttccatcttctaatgctgataaaggagatgtgagaatccaaagtcctttttcctatccaattacggatcatttcttctgcctcatcacgcacattt 690  Q
    || ||||||||||||||    || |||||||| |||||||||||||||  ||||||||||||| ||||| ||||||| ||  || ||||||  |||||||    
T  25001781 catcttccatcttctaaaaaagacaaaggagacgtgagaatccaaagtattttttcctatccagttacgaatcatttttttggcttcatcatacacattt 25001880  T
Q  691 cgacta 696  Q
    ||||||    
T  25001881 cgacta 25001886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 4583218 - 4583319
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||| ||| || |||| |||||||||    
T  4583218 atcatgaatcagtcatcaacaatttaaaaatgaattaaacattaagattaaaattaactttttcaaaaaagtcaattttctggctgcaccgtagaagctc 4583317  T
Q  226 cc 227  Q
    ||    
T  4583318 cc 4583319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 10481908 - 10481996
Alignment:
Q  130 ttaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccata 218  Q
    |||||||||||| |||||||||||||| ||| ||| ||| |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  10481908 ttaatcagtaattaacaatttaaaaataaattaaatattaagatcaaaattaactttttcaaaaaagtcagttttctgactgcaccata 10481996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 133 - 231
Target Start/End: Complemental strand, 15672614 - 15672514
Alignment:
Q  133 atcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacacc--atagaagctcccata 230  Q
    |||| ||||||||||||||||||||||| ||||||| || | |||||||| ||||||||||||||||||||||||||| ||||   ||||||||||||||    
T  15672614 atcaataatcaacaatttaaaaatgaattaaacattaaggttaaaattaattttttcaaaaaagtcagtttcctgactgcaccctgtagaagctcccata 15672515  T
Q  231 a 231  Q
    |    
T  15672514 a 15672514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 126 - 195
Target Start/End: Original strand, 22687530 - 22687599
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaa 195  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||    
T  22687530 atcattaatcagtaatcaacaatttaaaaatgaatcatacattaagattaaaattaactttttcaaaaaa 22687599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 37704481 - 37704582
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||| |||||||||||||||| |||||||||||||||| | ||||| ||||  |||| ||||||||||| |||||||||| ||||||| ||||||    
T  37704481 atcattaattagtaatcaacaatttacaaatgaatcaaacattaaaatcaagattagtttttccaaaaaagtcaatttcctgactgcaccataaaagctc 37704580  T
Q  226 cc 227  Q
    ||    
T  37704581 cc 37704582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 48928159 - 48928057
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||  |||||||||||||||||| |||| |||||| ||||||||||||| ||||| |||||||||| ||| || ||| |||| |||||||||    
T  48928159 atcattaatcaacaatcaacaatttaaaaataaatcgaacatttagatcaaaattaatttttttaaaaaagtcaattttctaactgcaccgtagaagctc 48928060  T
Q  226 cca 228  Q
    |||    
T  48928059 cca 48928057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 25691406 - 25691337
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaa 195  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||| ||||||    
T  25691406 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaaattttttaaaaaa 25691337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 32820915 - 32820846
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaa 195  Q
    |||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  32820915 atcattcatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttaaaaaaa 32820846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 27284043 - 27284145
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaat-gaatcaaacattcagatcaaaattaa-ctttttcaaaaaagtcagtttcctgactacaccatagaagc 223  Q
    ||||||||||||||||||| |||||||||||  ||||||||||| | ||||||||||| |||||  |||||||||| |||||||||| |||| |||||||    
T  27284043 atcattaatcagtaatcaataatttaaaaataaaatcaaacattaaaatcaaaattaatcttttcaaaaaaagtcaatttcctgactgcaccgtagaagc 27284142  T
Q  224 tcc 226  Q
    |||    
T  27284143 tcc 27284145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 32593068 - 32592996
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtca 199  Q
    |||||||||||| |||||||||||||||| |||||  |||||| ||||||||||||||||||||||||||||||    
T  32593068 atcattaatcagcaatcaacaatttaaaa-tgaattgaacattaagatcaaaattaactttttcaaaaaagtca 32592996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 43925394 - 43925459
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaa 191  Q
    ||||| ||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  43925394 atcatgaatcactaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaa 43925459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 402 - 638
Target Start/End: Original strand, 24437085 - 24437324
Alignment:
Q  402 agcttaacatttcataaaataga-gag-ttacaagcagctagagttaactttgaaagggtattccccaacaattttgaagagccaatacaatagaaaaac 499  Q
    ||||||||||||||||||||||| ||  |||||| || |||| |||||| ||||| ||| |||||||| | |||||||||||| |  |||| |||||||     
T  24437085 agcttaacatttcataaaatagaagatattacaaacaactagtgttaacattgaaggggcattccccatccattttgaagagctaggacaagagaaaaaa 24437184  T
Q  500 -ctattaaaacaggatttgcagtacacctaaactttgaatacaaatatgataacttaaaccaaattccataagctagcaactcattcatcaacaacttcc 598  Q
     |||  | | || | ||| ||  |||| ||||||||| | |||| | | | ||  |||||||||||  |||| ||| |||| | |||||||||||||||     
T  24437185 tctacaacatcatgcttttcaagacacataaactttgtagacaagtgtaagaaaataaaccaaattttataacctaacaaccctttcatcaacaacttct 24437284  T
Q  599 atcttctaatgctgataaaggagatgtgagaatccaaagt 638  Q
    |||||||| |||| | ||||||||||||||||||||||||    
T  24437285 atcttctactgctaacaaaggagatgtgagaatccaaagt 24437324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 5657343 - 5657264
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattca-gatcaaaattaactttttcaaaaaagtcagtttc 204  Q
    ||||||||| ||||||||| ||||||||||||||| || |||| | ||| |||||||||||||||||||| |||||||||    
T  5657343 atcattaatgagtaatcaaaaatttaaaaatgaataaatcattaaagattaaaattaactttttcaaaaatgtcagtttc 5657264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 34362040 - 34361967
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacatt-caga-tcaaaattaactttttcaaaaaagt 197  Q
    ||||||||||||| || ||||||||||||||||||||||||||  ||| | |||||||||||||||||||||||    
T  34362040 atcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagt 34361967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 44598978 - 44599066
Alignment:
Q  138 taatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    ||||||||||||||||| |||||||| | || |||| |||||||| |||||||||||| |||||||| ||||| |||| ||||| |||||    
T  44598978 taatcaacaatttaaaa-tgaatcaatcgttaagattaaaattaattttttcaaaaaaatcagtttcatgactgcaccgtagaaactccc 44599066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 11071502 - 11071558
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaa 182  Q
    ||||||||||| ||||||||||||||||||||||||||||||| | |||| ||||||    
T  11071502 atcattaatcattaatcaacaatttaaaaatgaatcaaacattaaaatcataattaa 11071558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 12166215 - 12166291
Alignment:
Q  153 aaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctcccat 229  Q
    |||||||||||||||| |||| |||||||||||||| | ||||||||||||| ||||| ||   |||||||||||||    
T  12166215 aaatgaatcaaacattaagattaaaattaacttttttagaaaagtcagtttcatgactgcagtgtagaagctcccat 12166291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 8759575 - 8759624
Alignment:
Q  182 actttttcaaaaaagtcagtttcctgactacaccatagaagctcccataa 231  Q
    |||||||||||||||||| |||| || ||||||||||||||| |||||||    
T  8759575 actttttcaaaaaagtcattttcttggctacaccatagaagcccccataa 8759624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 4902657 - 4902705
Alignment:
Q  180 taactttttcaaaaaagtcagtttcctgactacaccatagaagctccca 228  Q
    |||||||||||||||||||| ||| |||||| |||||||||||| ||||    
T  4902657 taactttttcaaaaaagtcaattttctgacttcaccatagaagccccca 4902705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 158
Target Start/End: Original strand, 12166042 - 12166074
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatga 158  Q
    |||||||||||||||||||||||||||||||||    
T  12166042 atcattaatcagtaatcaacaatttaaaaatga 12166074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 33688118 - 33688053
Alignment:
Q  162 aaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    ||||||| | || |||||||||||||| |||||||||||||||  |||| |||  |||||||||||    
T  33688118 aaacattaaaattaaaattaacttttttaaaaaagtcagtttcacgactgcactgtagaagctccc 33688053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 1e-58; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 394 - 665
Target Start/End: Complemental strand, 49723350 - 49723076
Alignment:
Q  394 taaacaatagcttaacatttcataaaatagagag--ttacaagcagctagagttaactttgaaagggtattccccaacaattttgaagagccaatacaat 491  Q
    |||||| ||||||| |||||||||| |||||||   |||||||||| ||| |||||| ||||| ||  ||||||||||||||||||||| ||| |||||     
T  49723350 taaacactagcttagcatttcataacatagagaacattacaagcagatagcgttaacattgaagggacattccccaacaattttgaagatccagtacaaa 49723251  T
Q  492 agaaaaa-cctattaaaacaggatttgcagtacacctaaactttgaatacaaatatgataacttaaaccaaattccataagctagcaactcattcatcaa 590  Q
    ||||||| ||||  | | || ||||||||  |||| ||||||||| | |||||||||| || |||||||||| | ||||| ||| |||| ||||||||||    
T  49723250 agaaaaatcctacaagagcatgatttgcaaaacacataaactttgcagacaaatatgagaaattaaaccaaaattcataacctaacaacccattcatcaa 49723151  T
Q  591 caacttccatcttctaatgctgataaaggagatgtgagaatccaaagtcctttttcctatccaattacggatcat 665  Q
    || ||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||    
T  49723150 cagctttcatcttctaatgctgataaagaagatgtgagaatccaaagtcttttttcctatccagttacggatcat 49723076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 20373124 - 20373025
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20373124 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccatagaagctc 20373025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 39282967 - 39283067
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  39282967 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctc 39283066  T
Q  226 c 226  Q
    |    
T  39283067 c 39283067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 4015774 - 4015876
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  4015774 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtcagtttcatgactgcaccgtagaagctc 4015873  T
Q  226 cca 228  Q
    |||    
T  4015874 cca 4015876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 21193925 - 21194027
Alignment:
Q  129 attaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccca 228  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||| |||| ||||||||||||    
T  21193925 attaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtcagtttcatgactgcaccgtagaagctccca 21194024  T
Q  229 taa 231  Q
    |||    
T  21194025 taa 21194027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 40552117 - 40552019
Alignment:
Q  129 attaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||    
T  40552117 attaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtcagtttccagactgcaccgtagaagctccc 40552019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 48355256 - 48355358
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||    
T  48355256 atcattaatcagtaagcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtcaatttcctaactgcaccatagaagctc 48355355  T
Q  226 cca 228  Q
    |||    
T  48355356 cca 48355358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 3362570 - 3362671
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| |||||||||| ||||||||||||||    
T  3362570 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcataattaacttttccaaaaaagtcaatttcctgactgcaccatagaagctc 3362669  T
Q  226 cc 227  Q
    ||    
T  3362670 cc 3362671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 37158023 - 37158124
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  37158023 atcattaatgagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctc 37158122  T
Q  226 cc 227  Q
    ||    
T  37158123 cc 37158124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 37203383 - 37203484
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  37203383 atcattaatgagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctc 37203482  T
Q  226 cc 227  Q
    ||    
T  37203483 cc 37203484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 389 - 696
Target Start/End: Complemental strand, 27430063 - 27429752
Alignment:
Q  389 gacaataaacaatagcttaacatttcataaaatagagagt--tacaagcagctagagttaactttgaaagggtattccccaacaattttgaagagccaat 486  Q
    |||| ||||||| ||||||||||||||||||| | ||| |  ||||  |||||||  || || ||||| ||  ||||||||||||  |||||||| ||||    
T  27430063 gacagtaaacaagagcttaacatttcataaaacatagaatattacatccagctagtattgacattgaagggacattccccaacaaacttgaagagtcaat 27429964  T
Q  487 acaatagaaa-aacctattaaaacaggatttgcagtacacctaaactttgaatacaaa-tatgataacttaaaccaaattccataagctagcaactcatt 584  Q
    |||| ||||| |||||| |||  || ||||| || ||||| ||||||||| | ||||| ||||| || ||  |||| | | || || ||| |||  ||||    
T  27429963 acaagagaaataacctactaattcatgatttacaatacacataaactttgtagacaaaatatgagaaattcgaccataattcacaacctaacaatccatt 27429864  T
Q  585 catcaacaacttccatcttctaatgctgataaaggagatgtgagaatccaaagtcctttttcctatccaattacggatcatttcttctgcctcatcacgc 684  Q
    |||||||| |||||||||||||| | ||| ||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||| ||  || |||||||||    
T  27429863 catcaacatcttccatcttctaaaggtgacaaaggagatgtgagaatccaatgtctttttttctatccagttacggatcatttttttggcttcatcacgc 27429764  T
Q  685 acatttcgacta 696  Q
    ||||||||||||    
T  27429763 acatttcgacta 27429752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 1090008 - 1090102
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccataga 220  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  1090008 atcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcctgactacaccgtaga 1090102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 126 - 239
Target Start/End: Complemental strand, 33378646 - 33378533
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||| |||||||||    
T  33378646 atcattaatcaataatcaacgatttaaaaatgaatcaaacattaagattaaaattaattttttcaaaaaagtcagtttcctgactgcaccgtagaagctc 33378547  T
Q  226 ccataactaaattg 239  Q
    ||| || |||||||    
T  33378546 ccaaaattaaattg 33378533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 22445926 - 22445826
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  22445926 atcattaatcagtaatcaacaatttaaatatgaatcaaacattaagatcataattaacttttccaaaaaagtcagtttcctgactgcactatagaagctc 22445827  T
Q  226 c 226  Q
    |    
T  22445826 c 22445826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 21009662 - 21009559
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||| ||||||||||||||||||||| |||| ||||| |||    
T  21009662 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaatttttttaaaaaagtcagtttcctgactgcaccgtagaaactc 21009563  T
Q  226 ccat 229  Q
    ||||    
T  21009562 ccat 21009559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 22622579 - 22622478
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| |||| || ||||||    
T  22622579 atcattaatcagtaatcaactatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaaatcagtttcctgactgcaccgtaaaagctc 22622480  T
Q  226 cc 227  Q
    ||    
T  22622479 cc 22622478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 26941121 - 26941020
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||||||||||||||||| | || | |||||||||||||||||||||||||||||||| |||||| |||| |||||||||    
T  26941121 atcattaatcagtaatcaacaatttaaaaatgaatcaagcgttaaaatcaaaattaactttttcaaaaaagtcagttttctgactgcaccgtagaagctc 26941022  T
Q  226 cc 227  Q
    ||    
T  26941021 cc 26941020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 46297623 - 46297522
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||  ||||| |||| |||||||||    
T  46297623 atcattaattagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagttttttgactgcaccgtagaagctc 46297524  T
Q  226 cc 227  Q
    ||    
T  46297523 cc 46297522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 53229013 - 53228912
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||||||| |||| |||||||||    
T  53229013 atcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttccaaaaaaatcagttgcctgactgcaccgtagaagctc 53228914  T
Q  226 cc 227  Q
    ||    
T  53228913 cc 53228912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 47481838 - 47481937
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||||||||||  ||| |||||||||    
T  47481838 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaaatcaatttcctgactgtaccgtagaagctc 47481937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 126 - 221
Target Start/End: Original strand, 54506123 - 54506218
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaa 221  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||| |||||||||| |||| |||||    
T  54506123 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaaatcaatttcctgactgcaccgtagaa 54506218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 125 - 227
Target Start/End: Complemental strand, 11357020 - 11356918
Alignment:
Q  125 catcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagct 224  Q
    |||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||  |||||| |||| |||| |||    
T  11357020 catcattaattagtaatcaacaatttaaaaatgaatccaacattaagatcaaaattaactttttcaaaaaagtcagttgtctgactgcaccgtagatgct 11356921  T
Q  225 ccc 227  Q
    |||    
T  11356920 ccc 11356918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 11357242 - 11357145
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagc 223  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||  |||||| || | |||||||    
T  11357242 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttccaaaaaagtcagttgtctgactgcatcgtagaagc 11357145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 14586541 - 14586440
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||||||||||||  || | ||||||||||||||    
T  14586541 atcattaatcagtaatcaacaatttaaaaataaatcaaacattaagattaaaattaattttttcaaaaaagtcagtttcacgagtgcaccatagaagctc 14586442  T
Q  226 cc 227  Q
    ||    
T  14586441 cc 14586440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 42505936 - 42505837
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||||||||||||||||| | || | ||||||||||||||| |||||||||||| |||||||||| |||| |||||||||    
T  42505936 atcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaactttatcaaaaaagtcaatttcctgactgcaccgtagaagctc 42505837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 2008254 - 2008356
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||| |||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||| | |||| || ||||||    
T  2008254 atcagtaatcattaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtcagtttcatgattgcaccgtaaaagctc 2008353  T
Q  226 cca 228  Q
    |||    
T  2008354 cca 2008356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 29099661 - 29099763
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttc-aaaaaagtcagtttcctgactacaccatagaagct 224  Q
    |||||||||||| |||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||||||||||| ||||| |||| ||||||||    
T  29099661 atcattaatcagcaatcaacaatttaaaaatgaatcaaacattaatattaaaattaactttttcaaaaaaagtcagtttcatgactgcaccgtagaagct 29099760  T
Q  225 ccc 227  Q
    |||    
T  29099761 ccc 29099763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 36012454 - 36012556
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaa-ttaactttttcaaaaaagtcagtttcctgactacaccatagaagct 224  Q
    ||||||||||||||||||||||||||||||| ||||||||||| | || |||| |||||||||||||||||||||||||| ||||| |||| ||||||||    
T  36012454 atcattaatcagtaatcaacaatttaaaaataaatcaaacattaaaattaaaatttaactttttcaaaaaagtcagtttcatgactgcaccgtagaagct 36012553  T
Q  225 ccc 227  Q
    |||    
T  36012554 ccc 36012556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 52040783 - 52040682
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||   ||||| || | |||||||||    
T  52040783 atcattaatgagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttccaaaaaagtcagttgtatgactgcagcgtagaagctc 52040684  T
Q  226 cc 227  Q
    ||    
T  52040683 cc 52040682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 33698468 - 33698546
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttc 204  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||| ||||||||||||||||||||||||||||||    
T  33698468 atcattaatcagtaatcaacaatttaaaaatgaatcagtcattaagattaaaattaactttttcaaaaaagtcagtttc 33698546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 43975753 - 43975652
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||| ||||||||||||||||||||||| |||||| ||||||| ||||| |||||||||| ||||||||| |||||| |||| ||||| |||    
T  43975753 atcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaagattaattttttcaaaagagtcagttttctgactgcaccgtagaaactc 43975654  T
Q  226 cc 227  Q
    ||    
T  43975653 cc 43975652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 126 - 203
Target Start/End: Original strand, 44891812 - 44891889
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagttt 203  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||||    
T  44891812 atcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaacttttttaaaaaagtcagttt 44891889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 24707976 - 24707892
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgact 210  Q
    ||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||| ||| ||| ||||||    
T  24707976 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaaatcaattttctgact 24707892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 11467132 - 11467226
Alignment:
Q  133 atcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    |||| |||||||||||||||||||||||||| |||| |||  |||||||||||||||||||||||||||||  ||||| |||| |||||||||||    
T  11467132 atcattaatcaacaatttaaaaatgaatcaatcattaagaataaaattaactttttcaaaaaagtcagtttgatgactgcaccgtagaagctccc 11467226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 44186378 - 44186295
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgac 209  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||||| ||| |||| ||||    
T  44186378 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacattttcgaaaaaatcaatttcatgac 44186295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 4761509 - 4761412
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagc 223  Q
    |||||||||||| |||||||||||| ||||||||||||||||| | ||||||||||||||||| |||||||| | |||| ||| | ||| ||||||||    
T  4761509 atcattaatcagaaatcaacaatttgaaaatgaatcaaacattaaaatcaaaattaactttttaaaaaaagtaactttcttgaatgcactatagaagc 4761412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 35844577 - 35844673
Alignment:
Q  141 tcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctcccataactaaat 237  Q
    |||||||||||||||| ||||||||||| | || ||||||||||||||||||||||||| |||| | ||| |||| || |||||||||||| |||||    
T  35844577 tcaacaatttaaaaataaatcaaacattaaaattaaaattaactttttcaaaaaagtcaatttcataactgcaccgtaaaagctcccataaataaat 35844673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 193
Target Start/End: Original strand, 22451283 - 22451350
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaa 193  Q
    |||||||||||| |||||| |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  22451283 atcattaatcagcaatcaaaaatttaaaaatgaatcgaacattaagatcaaaattaactttttcaaaa 22451350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 51212632 - 51212536
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||| |  |||||||||||||||||||||      ||| ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  51212632 atcattaattaaaaatcaacaatttaaaaatgaa------attaagatcaaaattaactttttcaaaaatgtcagttttctgactgcaccatagaagctc 51212539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 126 - 192
Target Start/End: Original strand, 50475133 - 50475199
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaa 192  Q
    ||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||| |||||||||    
T  50475133 atcattaatcagtaatcaataatttaaaaatgaatcaaacattaaaatcaaaattaaatttttcaaa 50475199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 7327343 - 7327274
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaa 195  Q
    ||||||||||||||||||||||||||||||||||||||  ||| |||| |||||||||||||| ||||||    
T  7327343 atcattaatcagtaatcaacaatttaaaaatgaatcaattattaagattaaaattaacttttttaaaaaa 7327274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 40936288 - 40936361
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtca 199  Q
    |||||||||| |||||||||||||||||||| |||||| |||| ||||  ||||||||||||||||||||||||    
T  40936288 atcattaatcggtaatcaacaatttaaaaataaatcaatcattaagattgaaattaactttttcaaaaaagtca 40936361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 3655058 - 3654983
Alignment:
Q  129 attaatcagtaatcaacaatttaaaaatgaa-tcaaacattcagatcaaaattaactttttcaaaaaagtcagttt 203  Q
    |||||||||||||||||||||||||||| || ||||||||| | |||||||||||| ||||||||||| |||||||    
T  3655058 attaatcagtaatcaacaatttaaaaataaaatcaaacattaaaatcaaaattaacattttcaaaaaaatcagttt 3654983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 24488823 - 24488720
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaa-aaaagtcagtttcctgactacaccatagaagct 224  Q
    ||||| ||||| ||||||| ||||||||||||||||||||||| | || |||||||||||||| || |||||||| |||||| | |||| | ||||||||    
T  24488823 atcatgaatcaataatcaataatttaaaaatgaatcaaacattaatattaaaattaactttttaaataaaagtcaatttcctcattacatcgtagaagct 24488724  T
Q  225 ccca 228  Q
    ||||    
T  24488723 ccca 24488720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 133 - 203
Target Start/End: Original strand, 29164124 - 29164194
Alignment:
Q  133 atcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagttt 203  Q
    |||| ||||||||||||||||||| ||||||||||| |||| |||||||||||||| | ||||||||||||    
T  29164124 atcattaatcaacaatttaaaaataaatcaaacattaagattaaaattaacttttttagaaaagtcagttt 29164194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 32373785 - 32373885
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||| |||||  | || | |||| ||||||||||||||||||||| ||||||||  ||||  ||| |||||||||    
T  32373785 atcattaatcagtaatcaacaatttaaaa-tgaattcatcaataagattaaaattaactttttcaaaaaattcagtttcacgactgtaccgtagaagctc 32373883  T
Q  226 cc 227  Q
    ||    
T  32373884 cc 32373885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 25580054 - 25580132
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttc 204  Q
    |||||||||| | ||||||||||||||||||||| ||| |||| |||| || ||||||||||| |||||||||| ||||    
T  25580054 atcattaatccgcaatcaacaatttaaaaatgaaccaatcattaagattaagattaacttttttaaaaaagtcaatttc 25580132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 34133312 - 34133373
Alignment:
Q  165 cattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctcc 226  Q
    |||| |||| |||||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  34133312 cattaagattaaaattaactttttcaaaaaagtcagtttcctaactgcaccttagaagctcc 34133373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 38592013 - 38592051
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 164  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38592013 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 38592051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 27480216 - 27480139
Alignment:
Q  129 attaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcct 206  Q
    |||||||||  |||||||||||||||||||||| |||||| ||| ||||||||  ||||| |||||| ||| ||||||    
T  27480216 attaatcagcgatcaacaatttaaaaatgaatcgaacattaagaacaaaattatatttttaaaaaaaatcaatttcct 27480139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 13498678 - 13498736
Alignment:
Q  172 atcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctcccata 230  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||  ||||||||| ||||    
T  13498678 atcaaaattaacttttttaaaaaagtcaattttctgactacactgtagaagctctcata 13498736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 42664033 - 42663971
Alignment:
Q  180 taactttttcaaaaaagtcagtttcctgactacaccatagaagctcccataactaaattgtaa 242  Q
    |||||||||| ||||||||| |||| |||||||||||||||||| ||| ||| |||| |||||    
T  42664033 taactttttctaaaaagtcattttcttgactacaccatagaagcccccttaattaaaatgtaa 42663971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 45174819 - 45174889
Alignment:
Q  156 tgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctcc 226  Q
    ||||| ||||||| | || |||||||||||||||||||||| ||||||  ||||||||||  |||||||||    
T  45174819 tgaattaaacattaaaattaaaattaactttttcaaaaaagccagtttgatgactacaccgaagaagctcc 45174889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 5125556 - 5125597
Alignment:
Q  180 taactttttcaaaaaagtcagtttcctgactacaccatagaa 221  Q
    |||||||||||||||||||| |||| ||||||||||||||||    
T  5125556 taactttttcaaaaaagtcattttcttgactacaccatagaa 5125597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 38592046 - 38592101
Alignment:
Q  172 atcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    |||||||||||||||||||||||||||| |||| | ||| |||| | |||||||||    
T  38592046 atcaaaattaactttttcaaaaaagtcaatttcttaactgcaccgttgaagctccc 38592101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 34133250 - 34133288
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 164  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  34133250 atcatgaatcggtaatcaacaatttaaaaatgaatcaaa 34133288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 43348556 - 43348598
Alignment:
Q  153 aaatgaatcaaacattcagatcaaaattaactttttcaaaaaa 195  Q
    ||||||||||| |||| |||| |||||||||||||||||||||    
T  43348556 aaatgaatcaatcattaagattaaaattaactttttcaaaaaa 43348598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 54607984 - 54608025
Alignment:
Q  182 actttttcaaaaaagtcagtttcctgactacaccatagaagc 223  Q
    |||||||||||||||||| |||| | ||||||||||||||||    
T  54607984 actttttcaaaaaagtcattttcttaactacaccatagaagc 54608025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 1e-40; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 37970386 - 37970285
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  37970386 atcattaatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtcactttcctgactgcaccatagaagctc 37970287  T
Q  226 cc 227  Q
    ||    
T  37970286 cc 37970285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 43643462 - 43643361
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  43643462 atcattaatcagtaatcgacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtcagttttctgactgcaccatagaagctc 43643363  T
Q  226 cc 227  Q
    ||    
T  43643362 cc 43643361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 5299813 - 5299712
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  5299813 atcattaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaattaactttttcaaaaaagtcagtttcatgactgcaccatagaagctc 5299714  T
Q  226 cc 227  Q
    ||    
T  5299713 cc 5299712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 16446742 - 16446641
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  16446742 atcattaatcagtaatcaacaatttaaaaatgaatctaacattaaaatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctc 16446643  T
Q  226 cc 227  Q
    ||    
T  16446642 cc 16446641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 35859257 - 35859358
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| ||||| |||    
T  35859257 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaaactc 35859356  T
Q  226 cc 227  Q
    ||    
T  35859357 cc 35859358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 41362745 - 41362845
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  41362745 atcattaaccagtaatcaacaatttaaaaatgaattaaacattaagatcaaaattaattttttcaaaaaagtcagtttcctgactgcaccatagaagctc 41362844  T
Q  226 c 226  Q
    |    
T  41362845 c 41362845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 7890824 - 7890722
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||  |||| |||||||||    
T  7890824 atcattaatcagtaatcaacaatttaaaaatgaatcaaatattaagatcaaaattaactttttcaaaaaagtcagtttcatgaccgcaccgtagaagctc 7890725  T
Q  226 cca 228  Q
    |||    
T  7890724 cca 7890722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 23854298 - 23854200
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||    
T  23854298 atcattaatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaa-tcaatttcctgactacaccataaaagctc 23854200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 1149499 - 1149398
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||| |||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| |||||||||| |||| |||||||||    
T  1149499 atcattaatcggtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaattttttcaaaaaagtcaatttcctgactgcaccgtagaagctc 1149400  T
Q  226 cc 227  Q
    ||    
T  1149399 cc 1149398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 34895285 - 34895386
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||| |||||| ||| |||| |||||||||    
T  34895285 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttaaaaaagtcaatttcctaactgcaccgtagaagctc 34895384  T
Q  226 cc 227  Q
    ||    
T  34895385 cc 34895386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 31933753 - 31933653
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||  ||| ||||||||||||||    
T  31933753 atcattaatcagtaatcaacgatttaaaaatgaatcaaatattaagatcaaaattaattttttcaaaaaagtcagtttcccaactgcaccatagaagctc 31933654  T
Q  226 c 226  Q
    |    
T  31933653 c 31933653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 126 - 224
Target Start/End: Original strand, 466155 - 466253
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagct 224  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||| |||||||| ||||| |||| ||||||||    
T  466155 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttattcaaaaaaatcagtttcatgactgcaccgtagaagct 466253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 8803683 - 8803581
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||| |||| || || |||    
T  8803683 atcattaatcagtaatgaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcaatttcctgactgcaccgtaaaaactc 8803584  T
Q  226 cca 228  Q
    |||    
T  8803583 cca 8803581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 126 - 224
Target Start/End: Complemental strand, 34951924 - 34951826
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagct 224  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||| ||| | |||| ||||||||    
T  34951924 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcagaaaagtcagtttcatgattgcaccgtagaagct 34951826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 38644301 - 38644403
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||| ||||| |||| || ||||||    
T  38644301 atcattaatcagtaatcaaaaatttaaaaataaatcaaacattaagattaaaattaactttttcaaaaaagtcagtttcatgactgcaccgtaaaagctc 38644400  T
Q  226 cca 228  Q
    |||    
T  38644401 cca 38644403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 4132553 - 4132452
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||  |||||||||||||||||||||||| | ||||| |||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  4132553 atcattaatttgtaatcaacaatttaaaaatgaattacacattaagatcaaaattaacttttccaaaaaagtcagtttgctgactgcaccatagaagctc 4132454  T
Q  226 cc 227  Q
    ||    
T  4132453 cc 4132452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 203
Target Start/End: Complemental strand, 35459578 - 35459501
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagttt 203  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  35459578 atcattaatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtcagttt 35459501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 1953855 - 1953760
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaa 221  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||| |||| |||||    
T  1953855 atcattaatcaataatcaacaattttaaaatgaatcaaacattaagatcaaaattaattttttcaaaaaaatcagtttcctgactgcaccgtagaa 1953760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 1205250 - 1205352
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||| |||||| ||||||||||||||||||||||   ||||||||||||||||||| |||||||||| ||| ||||||||||| |||||||||    
T  1205250 atcattaatcactaatcagcaatttaaaaatgaatcaaacaacaagatcaaaattaacttttttaaaaaagtcaattttctgactacaccgtagaagctc 1205349  T
Q  226 cca 228  Q
    |||    
T  1205350 cca 1205352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 12587905 - 12587981
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtt 202  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  12587905 atcattaatcagtaattaacaatttaaaaatgaatcaaacattaagatcaaaattaattttttcaaaaaagtcagtt 12587981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 126 - 231
Target Start/End: Original strand, 16223186 - 16223294
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaa---ctttttcaaaaaagtcagtttcctgactacaccatagaag 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    |||||  ||||||||||||| ||||||  ||||||||||    
T  16223186 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaattttttttttcaaaaagtcagttttctgactggaccatagaag 16223285  T
Q  223 ctcccataa 231  Q
    |||||||||    
T  16223286 ctcccataa 16223294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 44869820 - 44869898
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttc 204  Q
    ||||||||||||||| ||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||    
T  44869820 atcattaatcagtaaccaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaagtcagtttc 44869898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 30654449 - 30654349
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||| |||||||||||| ||||||||| ||| | |||||||||||||||||||||||| |||||||||||||| |||| ||||| |||    
T  30654449 atcattaatcagtaattaacaatttaaaa-tgaatcaaatattaaaatcaaaattaactttttcaaaaaaatcagtttcctgactgcaccgtagaaactc 30654351  T
Q  226 cc 227  Q
    ||    
T  30654350 cc 30654349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 33198125 - 33198226
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||| |||||||||||||||||||||||||| |||| |||| || |||||||||||||||||||||| |||| ||| | |||| |||||||||    
T  33198125 atcattaatcaataatcaacaatttaaaaatgaatcaatcattaagattaagattaactttttcaaaaaagtcaatttcatgattgcaccgtagaagctc 33198224  T
Q  226 cc 227  Q
    ||    
T  33198225 cc 33198226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 528 - 699
Target Start/End: Complemental strand, 18621545 - 18621374
Alignment:
Q  528 aaactttgaatacaaatatgataacttaaaccaaattccataagctagcaactcattcatcaacaacttccatcttctaatgctgataaaggagatgtga 627  Q
    |||||||| | |||| |||||  | |||| ||||||| ||||  ||| |||| ||| |||||||| |||||| ||||||    ||| |||||||||||||    
T  18621545 aaactttgcagacaagtatgaggatttaagccaaatttcatactctaacaacccatccatcaacatcttccaacttctatgtttgacaaaggagatgtga 18621446  T
Q  628 gaatccaaagtcctttttcctatccaattacggatcatttcttctgcctcatcacgcacatttcgactacac 699  Q
    |||||||||||| ||||||||||||| ||||||||||||| | |  || |||||||| ||||||||||||||    
T  18621445 gaatccaaagtcttttttcctatccagttacggatcatttttccaaccacatcacgctcatttcgactacac 18621374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 10555062 - 10554968
Alignment:
Q  136 agtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaa-ctttttcaaaaaagtcagtttcctgactacaccatagaagctcccat 229  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| ||| |||||  ||||||||||||||||||    
T  10555062 agtaataaacaatttaaaaatgaatcaaacattaagatcaaaattaatttttttcaaaaaagtcaattttctgaccgcaccatagaagctcccat 10554968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 11727347 - 11727449
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaa-gtcagtttcctgactacaccatagaagct 224  Q
    ||||||||||||||||||||||||||||||||||||||  ||| |||| |||||||||||||| |||||| |||| |||| ||||| |||| ||||||||    
T  11727347 atcattaatcagtaatcaacaatttaaaaatgaatcaattattaagattaaaattaacttttttaaaaaatgtcaatttcatgactgcaccgtagaagct 11727446  T
Q  225 ccc 227  Q
    |||    
T  11727447 ccc 11727449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 27082705 - 27082636
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaa 195  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  27082705 atcattaatcaataatcaacaatttaaaaatgaattaaacattaagatcaaaattaactttttcaaaaaa 27082636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 18259402 - 18259498
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaag 222  Q
    |||| |||| |||||||||||||||||||||||||||| |||| | || ||||||||| ||||||||||||||| |||| ||||| |||||||||||    
T  18259402 atcagtaatgagtaatcaacaatttaaaaatgaatcaatcattaaaattaaaattaaccttttcaaaaaagtcaatttcatgactgcaccatagaag 18259498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 33906535 - 33906634
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||| ||||||  ||||||||||||||| || | | |||||||||||||||||||||||||||||||||| |||||| |||  |||||||||    
T  33906535 atcattaatcagcaatcaa--atttaaaaatgaatcgaatagtaagatcaaaattaactttttcaaaaaagtcagttttctgactgcactgtagaagctc 33906632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 24823260 - 24823194
Alignment:
Q  127 tcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaa 193  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||| ||||    
T  24823260 tcattaatcagtaatcaacaatttaaaaataaatcaaacattaagattaaaattaacttttttaaaa 24823194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 127 - 207
Target Start/End: Original strand, 40862743 - 40862824
Alignment:
Q  127 tcattaatcagtaatcaacaatttaaaa-atgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctg 207  Q
    |||| ||||||||||| ||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||    
T  40862743 tcataaatcagtaatcgacaatttaaaaaatgaatcaaacattaagattaaaagtaactttttcaaaaaagtcaatttcctg 40862824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 6098380 - 6098275
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttc-aaaaaagtcagtttcctgactacaccatagaagct 224  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||  |||||||||  | |||||| ||||||| || | | |||||||||||||    
T  6098380 atcattaattagtaatcaacaatttaaaaatgaatcaaacattaagatcatgattaactttcccaaaaaaaatcagttttct-aatgcaccatagaagct 6098282  T
Q  225 cccataa 231  Q
    || ||||    
T  6098281 cctataa 6098275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 12876433 - 12876535
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||| ||| ||||||||||| ||| ||||| ||||||||||| | || |||| ||||||||| ||||||||||||||||||| || ||| || ||||||    
T  12876433 atcatgaataagtaatcaacagtttgaaaataaatcaaacattaaaattaaaagtaacttttttaaaaaagtcagtttcctgattataccgtataagctc 12876532  T
Q  226 cca 228  Q
    |||    
T  12876533 cca 12876535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 36694833 - 36694732
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||| ||| ||||||||| ||||||||||| ||||||||||| | || |||| |||||||||||||||| |||||||| | ||| || | |||||||||    
T  36694833 atcatgaataagtaatcaataatttaaaaataaatcaaacattaaaattaaaagtaactttttcaaaaaaatcagtttcttcactgcatcgtagaagctc 36694734  T
Q  226 cc 227  Q
    ||    
T  36694733 cc 36694732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 43025997 - 43026078
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaac-tttttcaaaaaagtcagtttcct 206  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| | || ||||||||| |||||||||||| ||| ||||||    
T  43025997 atcatgaatcagtgatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttttcaaaaaaatcaatttcct 43026078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 13307931 - 13308003
Alignment:
Q  155 atgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    |||||||||||||| |||| ||||||||||||||||||| ||||| |||| ||| | ||||||||||||||||    
T  13307931 atgaatcaaacattaagattaaaattaactttttcaaaatagtcaatttcatgattgcaccatagaagctccc 13308003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 41910895 - 41910824
Alignment:
Q  156 tgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    |||||||||||||||||| |||||||||||||| ||||||||||  ||  ||||| ||||||||||||||||    
T  41910895 tgaatcaaacattcagattaaaattaacttttttaaaaaagtcaaattaatgactgcaccatagaagctccc 41910824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 9864533 - 9864594
Alignment:
Q  165 cattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctcc 226  Q
    |||| |||| |||||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  9864533 cattaagattaaaattaactttttcaaaaaagtcagtttcctaactgcaccttagaagctcc 9864594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 39098986 - 39098891
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaa 221  Q
    ||||||||| | ||||||| |||||||||||| |||||||||| | || |||||||| ||||| |||||| |||||||| ||| | |||| |||||    
T  39098986 atcattaattaataatcaataatttaaaaatgcatcaaacattaaaattaaaattaatttttttaaaaaaatcagtttcatgattgcaccgtagaa 39098891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 1872622 - 1872582
Alignment:
Q  182 actttttcaaaaaagtcagtttcctgactacaccatagaag 222  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  1872622 actttttcaaaaaagtcattttcttgactacaccatagaag 1872582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 157
Target Start/End: Complemental strand, 1149787 - 1149756
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatg 157  Q
    ||||||||||||||||||||||||||||||||    
T  1149787 atcattaatcagtaatcaacaatttaaaaatg 1149756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 30650946 - 30650899
Alignment:
Q  180 taactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    |||||||||||||||||||| |||| ||||| |||| |||||||||||    
T  30650946 taactttttcaaaaaagtcaatttcttgactgcaccgtagaagctccc 30650899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 9864471 - 9864509
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaa 164  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  9864471 atcatgaatcggtaatcaacaatttaaaaatgaatcaaa 9864509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 1e-40; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 25184437 - 25184538
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  25184437 atcattaatcagtaatcgacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtcagttttctgactgcaccatagaagctc 25184536  T
Q  226 cc 227  Q
    ||    
T  25184537 cc 25184538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 34361378 - 34361277
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  34361378 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctc 34361279  T
Q  226 cc 227  Q
    ||    
T  34361278 cc 34361277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 879435 - 879333
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  879435 atcattaataagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttttaaaaagtcagttttctgactacaccatagaagctc 879336  T
Q  226 cca 228  Q
    |||    
T  879335 cca 879333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 126 - 231
Target Start/End: Original strand, 7703833 - 7703938
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||| |||| ||||||||     
T  7703833 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtcagtttcatgactgcaccgtagaagctt 7703932  T
Q  226 ccataa 231  Q
    ||||||    
T  7703933 ccataa 7703938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 49376291 - 49376392
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  49376291 atcattaatcagtaatcaagaatttaaaaatgaattaaacattaagatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctc 49376390  T
Q  226 cc 227  Q
    ||    
T  49376391 cc 49376392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 19440535 - 19440431
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||    
T  19440535 atcattaatcagtaatcaataatttaaaaattaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcctgactgcaccgtagaagctc 19440436  T
Q  226 ccata 230  Q
    |||||    
T  19440435 ccata 19440431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 6864359 - 6864461
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||| |||| |||||||||    
T  6864359 atcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagttttctgactgcaccgtagaagctc 6864458  T
Q  226 cca 228  Q
    |||    
T  6864459 cca 6864461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 33816403 - 33816302
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| || | |||||||||    
T  33816403 atcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaactttttcaaaaaagtcagtttcctgactgcatcgtagaagctc 33816304  T
Q  226 cc 227  Q
    ||    
T  33816303 cc 33816302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 35020918 - 35020817
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||| ||||||||||| |||||||||    
T  35020918 atcattaatcggtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaagagtcagttttctgactacaccgtagaagctc 35020819  T
Q  226 cc 227  Q
    ||    
T  35020818 cc 35020817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 36493576 - 36493475
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||| ||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  36493576 atcattaatccgtaattaacaatttaaaaatgaatcaaacattaagatcataattaactttttcaaaaaagtcaatttcctgactgcaccatagaagctc 36493477  T
Q  226 cc 227  Q
    ||    
T  36493476 cc 36493475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 3042946 - 3043043
Alignment:
Q  129 attaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctcc 226  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||| ||||| |||| ||||||||||    
T  3042946 attaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcaatttcttgactgcaccgtagaagctcc 3043043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 23761395 - 23761484
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacacc 215  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||    
T  23761395 atcattaatcagtaatcaataatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtcagtttcatgactacacc 23761484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 32912466 - 32912365
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||| || ||||||||||||||||||||||||||| |||| || ||||||    
T  32912466 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaatgaattttttcaaaaaagtcagtttcctgactgcaccgtaaaagctc 32912367  T
Q  226 cc 227  Q
    ||    
T  32912366 cc 32912365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 46888045 - 46887940
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| | |||| |||||||||    
T  46888045 atcattaatcactaatcaacaatttaaaaatgaatcaaatattaaaatcaaaattaactttttcaaaaaagtcagtttcctgattgcaccgtagaagctc 46887946  T
Q  226 ccataa 231  Q
     |||||    
T  46887945 gcataa 46887940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 47254064 - 47254165
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||  ||||| |||| |||||||||    
T  47254064 atcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaaaagtcagtttgatgactccaccgtagaagctc 47254163  T
Q  226 cc 227  Q
    ||    
T  47254164 cc 47254165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 19089340 - 19089237
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||||||||||||||||| | || | ||||||||||||||| |||||||||||| |||||||||| |||| |||||||||    
T  19089340 atcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaactttatcaaaaaagtcaatttcctgactgcaccgtagaagctc 19089241  T
Q  226 ccat 229  Q
    ||||    
T  19089240 ccat 19089237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 25700943 - 25700838
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||| ||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||| |||| ||||| |||    
T  25700943 atcattaatcaataatgtacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtcaatttcctaactgcaccgtagaaactc 25700844  T
Q  226 ccataa 231  Q
    ||||||    
T  25700843 ccataa 25700838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 26896412 - 26896513
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| |||||||||| |||||||||| |||| |||||| ||    
T  26896412 atcattaatcagtaatcaacaatttaaaaatgaatcgaacattaaaatcaaaattaacttttttaaaaaagtcaatttcctgactgcaccgtagaagttc 26896511  T
Q  226 cc 227  Q
    ||    
T  26896512 cc 26896513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 28002873 - 28002772
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||  ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||   |||||||||    
T  28002873 atcattaatcaacaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaactttttcaaaaaagtcagtttcctgactgcagtgtagaagctc 28002774  T
Q  226 cc 227  Q
    ||    
T  28002773 cc 28002772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 30002528 - 30002423
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||| |||||||| |||| | ||| |||| |||||||||    
T  30002528 atcattaatcagtaataaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcagaaaagtcaatttcataactgcaccgtagaagctc 30002429  T
Q  226 ccataa 231  Q
    ||||||    
T  30002428 ccataa 30002423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 231
Target Start/End: Original strand, 37775982 - 37776087
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||| |||||||||| |||| ||||| |||| |||||||||    
T  37775982 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattgaaattaacttttttaaaaaagtcaatttcatgactgcaccgtagaagctc 37776081  T
Q  226 ccataa 231  Q
    | ||||    
T  37776082 caataa 37776087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 32579770 - 32579874
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||| || ||| |||| ||||| |||    
T  32579770 atcattaatcagcaatcaacaatttaaaaataaatcaaacattaagatcaaaattaattttttcaaaaaagtcagttttctaactgcaccgtagaaactc 32579869  T
Q  226 ccata 230  Q
    |||||    
T  32579870 ccata 32579874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 39400332 - 39400416
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgact 210  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||    
T  39400332 atcattaatcagcaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtcagtttcatgact 39400416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 55240992 - 55240889
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||| | ||| |||| |||||| ||    
T  55240992 atcattaatcaataatcaacaatttaaaaatgaatcaaacattaagattaaaattaaatttttcaaaaaagtcagtttcataactgcaccgtagaagttc 55240893  T
Q  226 ccat 229  Q
    ||||    
T  55240892 ccat 55240889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 4598306 - 4598408
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||| ||||  |||||||||||||| ||||| |||| |||||||||    
T  4598306 atcattaatcagcaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacattttacaaaaagtcagtttcatgactgcaccgtagaagctc 4598405  T
Q  226 cca 228  Q
    |||    
T  4598406 cca 4598408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 23431879 - 23431980
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||| |||||||||||||||||||||| |||||||||| | || |||||||||||||||||||||||||||||| ||||| |||  |||||||||    
T  23431879 atcattaattagtaatcaacaatttaaaaatgcatcaaacattaaaattaaaattaactttttcaaaaaagtcagtttcatgactgcactgtagaagctc 23431978  T
Q  226 cc 227  Q
    ||    
T  23431979 cc 23431980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 29584087 - 29583986
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||| ||| |||||||||||||||||||||| |||| |||||||||||||||||| |||||| |||| ||||| |||| |||||||||    
T  29584087 atcattaatcagtaatgaacgatttaaaaatgaatcaaacattaagattaaaattaactttttcaaacaagtcaatttcatgactgcaccgtagaagctc 29583988  T
Q  226 cc 227  Q
    ||    
T  29583987 cc 29583986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 50765044 - 50765148
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||  ||||| ||| | |||| |||||||||    
T  50765044 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttttaaaaaagtttgtttcatgattgcaccgtagaagctc 50765143  T
Q  226 ccata 230  Q
     ||||    
T  50765144 tcata 50765148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 4205308 - 4205409
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||| ||| ||||||||| ||||||||||||||||||||||| | || |||| ||||||||||||||||||||||||| ||||| |||| |||||||||    
T  4205308 atcatgaataagtaatcaataatttaaaaatgaatcaaacattaaaattaaaagtaactttttcaaaaaagtcagtttcttgactgcaccgtagaagctc 4205407  T
Q  226 cc 227  Q
    ||    
T  4205408 cc 4205409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 126 - 203
Target Start/End: Complemental strand, 7152091 - 7152014
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagttt 203  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||    
T  7152091 atcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatgaaaaataactttttcaaaaaagtcagttt 7152014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 17272288 - 17272389
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||| ||||| ||| |||||||||||||||||||||| |||| |||||||||||||||||| |||||| |||| ||||| |||| |||||||||    
T  17272288 atcattaatcggtaatgaacgatttaaaaatgaatcaaacattaagattaaaattaactttttcaaataagtcaatttcatgactgcaccgtagaagctc 17272387  T
Q  226 cc 227  Q
    ||    
T  17272388 cc 17272389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 37663628 - 37663527
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||||||||||||||||| | || | ||||||||||||||| | |||||||||| ||||||||||  ||| |||||||||    
T  37663628 atcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaactttattaaaaaagtcaatttcctgactgtaccgtagaagctc 37663529  T
Q  226 cc 227  Q
    ||    
T  37663528 cc 37663527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 38012586 - 38012687
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||| |||||||||||||||||| |||| |||||| |||||||||||||||||||||||||| | |||||||||||| |||  || ||||||    
T  38012586 atcattaatcagcaatcaacaatttaaaaataaatcgaacattaagatcaaaattaactttttcaaaaaaattagtttcctgactgcactgtaaaagctc 38012685  T
Q  226 cc 227  Q
    ||    
T  38012686 cc 38012687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 1815625 - 1815693
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaa 194  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  1815625 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaa 1815693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 33341722 - 33341806
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgact 210  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||| |||||||||||| || |||||    
T  33341722 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaatttttttaaaaaagtcagtatcatgact 33341806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 37288054 - 37288154
Alignment:
Q  128 cattaatcagtaatcaacaatttaaaaatgaatcaaacattcaga-tcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctcc 226  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||| |||| ||||| |||| | ||||||||    
T  37288054 cattaatcagtaatcaataatttaaaaatgaatcaaacattaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgtggaagctcc 37288153  T
Q  227 c 227  Q
    |    
T  37288154 c 37288154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 130 - 221
Target Start/End: Original strand, 32592412 - 32592503
Alignment:
Q  130 ttaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaa 221  Q
    ||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||  ||||| |||| |||||    
T  32592412 ttaatcaataatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtcaattttatgactgcaccgtagaa 32592503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 50697566 - 50697644
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttc 204  Q
    ||||||||| ||||||||||||||||||||||||||||||||| | || |||||||| |||||||||||||||||||||    
T  50697566 atcattaattagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaattttttcaaaaaagtcagtttc 50697644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 4934100 - 4933996
Alignment:
Q  126 atcattaatcagtaatcaacaattt-aaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagct 224  Q
    ||||||||||||||||||| ||||| |||||| ||| ||||||| |||||||||||||||| |||||||||||||||||  |||||||| |||| |||||    
T  4934100 atcattaatcagtaatcaaaaattttaaaaataaattaaacattaagatcaaaattaacttgttcaaaaaagtcagtttattgactacatcatataagct 4934001  T
Q  225 cccat 229  Q
     ||||    
T  4934000 tccat 4933996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 9139553 - 9139653
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgact--acaccatagaagc 223  Q
    ||||||||||| ||||| |  |||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||| |||  |||||||||||||    
T  9139553 atcattaatcaataatcta--atttaaaaatgaatcaaacattaagatcataattaacttttccaaaaaagtcagtttcctcactgcacaccatagaagc 9139650  T
Q  224 tcc 226  Q
    |||    
T  9139651 tcc 9139653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 35025453 - 35025379
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagt 201  Q
    |||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||    
T  35025453 atcattaatcagcaatcaacaatttaaaaatgaatcaaacatt-aaatcaaaattaactttttcataaaagtcagt 35025379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 5047853 - 5047751
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||| ||||||  ||| ||||||||||||||||||| |||||| | ||||||||||| ||||||||||||||| ||||||||||| |||| || ||||||    
T  5047853 atcagtaatcaacaataaacaatttaaaaatgaatcgaacattaaaatcaaaattaattttttcaaaaaagtctgtttcctgactgcaccgtaaaagctc 5047754  T
Q  226 cca 228  Q
    |||    
T  5047753 cca 5047751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 17168037 - 17168138
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| | || |||| ||| ||||||||||||||||||||| | ||| |||| ||||| |||    
T  17168037 atcattaattagtaatcaataatttaaaaatgaatcaaacattaaaattaaaagtaattttttcaaaaaagtcagtttctttactgcaccgtagaaactc 17168136  T
Q  226 cc 227  Q
    ||    
T  17168137 cc 17168138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 17173614 - 17173715
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||| ||| ||||||||| ||||||||||||||||||||||| | || |||| ||| ||||||||||||||||||||| ||||| |||| ||||| |||    
T  17173614 atcatgaataagtaatcaataatttaaaaatgaatcaaacattaaaattaaaagtaattttttcaaaaaagtcagtttcttgactgcaccgtagaaactc 17173713  T
Q  226 cc 227  Q
    ||    
T  17173714 cc 17173715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 42200056 - 42200155
Alignment:
Q  127 tcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctcc 226  Q
    |||||||||||||||||| ||||||||||| ||||||||||  | ||| ||||||||||||||||||| |||| |||||||| | |||| ||||||||||    
T  42200056 tcattaatcagtaatcaataatttaaaaattaatcaaacatcaaaatc-aaattaactttttcaaaaaggtcaatttcctgattgcaccgtagaagctcc 42200154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 55477778 - 55477716
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaacttttt 188  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||    
T  55477778 atcattaatcagtaattaacaatttaaaaatgaatcaaacattaagatcaaaattaatttttt 55477716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 46884001 - 46883932
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaa 195  Q
    ||||||||||||||||||||||||||||||| ||||||||||| | || |||||||| ||||||||||||    
T  46884001 atcattaatcagtaatcaacaatttaaaaataaatcaaacattaaaataaaaattaattttttcaaaaaa 46883932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 137 - 225
Target Start/End: Original strand, 27396949 - 27397037
Alignment:
Q  137 gtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||  ||||| |||||||| ||| | |||| || ||||||    
T  27396949 gtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttttaaaaaatcagtttcatgattgcaccgtaaaagctc 27397037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 34947978 - 34947923
Alignment:
Q  130 ttaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactt 185  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  34947978 ttaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactt 34947923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 14246531 - 14246572
Alignment:
Q  182 actttttcaaaaaagtcagtttcctgactacaccatagaagc 223  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  14246531 actttttcaaaaaagtcattttcttgactacaccatagaagc 14246572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 47073108 - 47073065
Alignment:
Q  180 taactttttcaaaaaagtcagtttcctgactacaccatagaagc 223  Q
    |||||||||||||| ||||| ||| |||||||||||||||||||    
T  47073108 taactttttcaaaatagtcaatttactgactacaccatagaagc 47073065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 1e-40; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 10923047 - 10923148
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||    
T  10923047 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaagagtcagttttctgactgcaccatagaagctc 10923146  T
Q  226 cc 227  Q
    ||    
T  10923147 cc 10923148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 34012238 - 34012133
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| |||| |||||||||    
T  34012238 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttaaaaaagtcagtttcctgactgcaccgtagaagctc 34012139  T
Q  226 ccataa 231  Q
    ||||||    
T  34012138 ccataa 34012133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 46931730 - 46931833
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| |||| |||||||||    
T  46931730 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagtttccttactgcaccgtagaagctc 46931829  T
Q  226 ccat 229  Q
    ||||    
T  46931830 ccat 46931833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 32216375 - 32216476
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||| |||| |||||||||    
T  32216375 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagttttctgactgcaccgtagaagctc 32216474  T
Q  226 cc 227  Q
    ||    
T  32216475 cc 32216476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 2960068 - 2960170
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| |||| |||||| ||    
T  2960068 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaaatcagtttcctgactgcaccgtagaagatc 2960167  T
Q  226 cca 228  Q
    |||    
T  2960168 cca 2960170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 19899624 - 19899519
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| ||| |||  |||||||||    
T  19899624 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttccaaaaaagtcagtttcctaactgcactgtagaagctc 19899525  T
Q  226 ccataa 231  Q
    ||||||    
T  19899524 ccataa 19899519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 23999668 - 23999769
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| |||| |||||||||| ||||||||||||||    
T  23999668 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttaaaaaggtcaatttcctgactgcaccatagaagctc 23999767  T
Q  226 cc 227  Q
    ||    
T  23999768 cc 23999769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 48353862 - 48353963
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||| ||||| |||| |||||||||    
T  48353862 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaaatcagtttcatgactgcaccgtagaagctc 48353961  T
Q  226 cc 227  Q
    ||    
T  48353962 cc 48353963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 32267356 - 32267455
Alignment:
Q  128 cattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| |||||||||| |||| |||||||||||    
T  32267356 cattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaattttttcaaaaaagtcaatttcctgactgcaccgtagaagctccc 32267455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 11742224 - 11742123
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||| ||||| | |||||||| |||    
T  11742224 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaaatcagtttcatgactgcgccatagaaactc 11742125  T
Q  226 cc 227  Q
    ||    
T  11742124 cc 11742123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 14758352 - 14758453
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||  ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  14758352 atcattaatcaacaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaactttttcaaaaaagtcagtttcgtgactgcaccgtagaagctc 14758451  T
Q  226 cc 227  Q
    ||    
T  14758452 cc 14758453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 27563761 - 27563656
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||| ||||||| |||||||||||||| |||||||||| |||    
T  27563761 atcattaatcagtaatcaacaatttaaaaaagaatcaaacattaagatcataattaacttttccaaaaaaatcagtttcctgactgcaccatagaaactc 27563662  T
Q  226 ccataa 231  Q
     |||||    
T  27563661 tcataa 27563656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 10181861 - 10181761
Alignment:
Q  128 cattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    |||||||||  |||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| |||||||||||| ||||||||||||||||    
T  10181861 cattaatcaacaatcaacaatttaaaaatgaatcaaacattaagatcataattaacttttccaaaaaagttagtttcctgactgcaccatagaagctccc 10181762  T
Q  228 a 228  Q
    |    
T  10181761 a 10181761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 15168416 - 15168515
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||| ||| |||| |||||||||    
T  15168416 atcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaactttttcaaaaaaatcagtttcctaactgcaccgtagaagctc 15168515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 27532837 - 27532735
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| |||||||| ||||| |||| |||||||||    
T  27532837 atcattaatcagtaatcaacaatt-aaaaatgaatcaaacattaagattaaaattaactttttcaaaaaaatcagtttcatgactgcaccgtagaagctc 27532739  T
Q  226 ccat 229  Q
    ||||    
T  27532738 ccat 27532735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 47682350 - 47682247
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||| ||||||||||||| |||| ||||||| |||| ||||||||||| ||||||||||||||||| |||||| ||||||||||||||    
T  47682350 atcattaatcagtaattaacaatttaaaaaagaattaaacattaagattaaaattaacttgttcaaaaaagtcagtttactgactgcaccatagaagctc 47682251  T
Q  226 ccat 229  Q
    ||||    
T  47682250 ccat 47682247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 8222447 - 8222549
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaa-tcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagct 224  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||| ||||||  ||| ||||||||    
T  8222447 atcattaatcagtaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagttttctgactgtaccgtagaagct 8222546  T
Q  225 ccc 227  Q
    |||    
T  8222547 ccc 8222549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 30254746 - 30254843
Alignment:
Q  129 attaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctcc 226  Q
    |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| |||| ||||| ||||    
T  30254746 attaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttaaaaaagtcagtttcctgactgcaccgtagaaactcc 30254843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 27763166 - 27763082
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgact 210  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||| ||||||||||    
T  27763166 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaatgtcaatttcctgact 27763082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 1547591 - 1547669
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  1547591 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaattttttcaaaaaagtcagtttc 1547669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 126 - 224
Target Start/End: Complemental strand, 9902910 - 9902812
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagct 224  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||  ||| ||||| |||| ||||||||    
T  9902910 atcattaatcagtaatcaacaatttaaaaatgaatcaaatattaaaatcaaaattaactttttcaaaaaagtcaaattcttgactgcaccgtagaagct 9902812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 3535243 - 3535344
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||  |||||||||||||||||||||||||||||| |||| |||| ||||||||| |||||| |||||||| |||||||||| |||||||||    
T  3535243 atcattaatcaacaatcaacaatttaaaaatgaatcaaacattaagattaaaactaactttttaaaaaaaatcagtttcatgactacaccgtagaagctc 3535342  T
Q  226 cc 227  Q
    ||    
T  3535343 cc 3535344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 126 - 231
Target Start/End: Original strand, 15752349 - 15752454
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||  ||||| ||| ||| |||||| |||| |||||||||    
T  15752349 atcattaatcagtaatcaacaatttaaaaatgaattaaacattaagatcaaaattaattttttttaaaaaatcaattttctgactgcaccgtagaagctc 15752448  T
Q  226 ccataa 231  Q
    ||||||    
T  15752449 ccataa 15752454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 37451605 - 37451706
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||| |||| | ||| |||| ||||| |||    
T  37451605 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaactttttcaaaaaagtcaatttcttcactgcaccgtagaatctc 37451704  T
Q  226 cc 227  Q
    ||    
T  37451705 cc 37451706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 28564639 - 28564559
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcct 206  Q
    ||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||    
T  28564639 atcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcaatttcct 28564559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 22171031 - 22171134
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||| ||||||| || | | |||| |||||||||    
T  22171031 atcattaattagtaatcaacaatttaaaaataaatcaaacattaaaatcaaaattaactttttcaaaaaaatcagttttctaattgcaccgtagaagctc 22171130  T
Q  226 ccat 229  Q
    ||||    
T  22171131 ccat 22171134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 126 - 221
Target Start/End: Original strand, 38823534 - 38823629
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaa 221  Q
    |||||||||||||||||||||||||||||||||| |||| ||| |||| |||||||||||||| ||||||||||||||| ||||| |||| |||||    
T  38823534 atcattaatcagtaatcaacaatttaaaaatgaaacaaatattaagattaaaattaacttttttaaaaaagtcagtttcatgactgcaccgtagaa 38823629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 126 - 236
Target Start/End: Original strand, 47279509 - 47279620
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttc-aaaaaagtcagtttcctgactacaccatagaagct 224  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||| |||||||  ||||| |||| ||||||||    
T  47279509 atcattaattagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaaaatcagttttatgactgcaccgtagaagct 47279608  T
Q  225 cccataactaaa 236  Q
    ||| ||| ||||    
T  47279609 cccttaattaaa 47279620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 126 - 224
Target Start/End: Original strand, 4330601 - 4330699
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagct 224  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||| ||||||| ||||||  |||||| |||| ||||||||    
T  4330601 atcattaatcagtaatcaacaatataaaaatgaatcaaacattaagatcaaaattaatttttccaaaaaaatcagttgtctgactgcaccgtagaagct 4330699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 21289920 - 21290022
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||  ||||||||||||||  | ||| ||||||| |||| |    
T  21289920 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaatttttctaaaaaagtcagttttttaactgcaccatataagccc 21290019  T
Q  226 cca 228  Q
    |||    
T  21290020 cca 21290022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 31962936 - 31963038
Alignment:
Q  126 atcattaatcagtaatcaacaattt-aaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagct 224  Q
    |||||||||| |||||||||||||| |||||| ||||||||||| |||| |||||||||||||||||||||||||||||| | ||| |||| ||||||||    
T  31962936 atcattaatcggtaatcaacaattttaaaaataaatcaaacattaagattaaaattaactttttcaaaaaagtcagtttcataactgcaccgtagaagct 31963035  T
Q  225 ccc 227  Q
    |||    
T  31963036 ccc 31963038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 48620916 - 48621010
Alignment:
Q  133 atcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    |||| ||||||||||||| ||||||||||||||||| |||| |||||||||||||||| ||||||||||||| ||||| |||| |||||||||||    
T  48620916 atcattaatcaacaattttaaaatgaatcaaacattaagattaaaattaactttttcagaaaagtcagtttcatgactgcaccgtagaagctccc 48621010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 7078919 - 7078835
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgact 210  Q
    ||||||||||| |||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||| |||||||| |||||    
T  7078919 atcattaatcaataatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaaaaatcagtttcatgact 7078835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 443 - 646
Target Start/End: Complemental strand, 11777764 - 11777562
Alignment:
Q  443 gttaactttgaaagggtattccccaacaattttgaagagccaatacaatagaaaaa-cctattaaaacaggatttgcagtacacctaaactttgaataca 541  Q
    |||||| ||||| ||| |||||| |||||||||||||| ||||  ||| ||||||| ||||||| | || ||||||||  |||| | ||| | | | |||    
T  11777764 gttaacattgaaggggcattccc-aacaattttgaagatccaacgcaagagaaaaaacctattagagcatgatttgcaagacacattaacctcgcaaaca 11777666  T
Q  542 aatatgataacttaaaccaaattccataagctagcaactcattcatcaacaacttccatcttctaatgctgataaaggagatgtgagaatccaaagtcct 641  Q
    ||| ||| || ||||||||||||| |||| ||| |||| ||||||||||||  || |||||||||||||||| ||||||| ||||||||||||||||| |    
T  11777665 aatgtgagaaattaaaccaaattc-ataacctaacaacccattcatcaacagttttcatcttctaatgctgacaaaggaggtgtgagaatccaaagtctt 11777567  T
Q  642 ttttc 646  Q
    |||||    
T  11777566 ttttc 11777562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 15383256 - 15383355
Alignment:
Q  129 attaatcagtaatcaacaatttaaaaatgaa-tcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    ||||||||| ||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||| ||| ||||||||||  ||| |||||||||||    
T  15383256 attaatcagcaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaattaactttttcaaaaaaatcaatttcctgactgaaccgtagaagctccc 15383355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 129 - 224
Target Start/End: Complemental strand, 27267053 - 27266959
Alignment:
Q  129 attaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagct 224  Q
    |||||||| ||||||| ||||||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||||| | |||||||||||||    
T  27267053 attaatcaataatcaataatttaaaaatgaattaaacattaagatcaaaattaac-ttttccaaaaagtcagtttcctgaatgcaccatagaagct 27266959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 16415966 - 16416068
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||  |||||||| ||||   ||||| | || |||||||||    
T  16415966 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaatttttctaaaaaagttagttatttgactgcgccgtagaagctc 16416065  T
Q  226 cca 228  Q
    |||    
T  16416066 cca 16416068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 39393704 - 39393788
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgact 210  Q
    ||||||||||||||||||||||||||||||||||| ||||||| | || |||||||||||||| |||||||||| |||| |||||    
T  39393704 atcattaatcagtaatcaacaatttaaaaatgaataaaacattaaaattaaaattaacttttttaaaaaagtcaatttcatgact 39393788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 31621405 - 31621326
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaa-tgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttc 204  Q
    |||||||||||  ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||    
T  31621405 atcattaatcatcaatcaacaatttaaaaaatgaatcgaacattaagatcaaaattaactttttcaaaaaagtcagtttc 31621326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 33725468 - 33725366
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaa-tgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagct 224  Q
    |||||||||||| ||||||||||| ||||| |||||| |||||| |||||||||| ||||||||||||||| |||||||||||||| || | || |||||    
T  33725468 atcattaatcagcaatcaacaattaaaaaaatgaatcgaacattaagatcaaaataaactttttcaaaaaaatcagtttcctgactgcaacgtataagct 33725369  T
Q  225 ccc 227  Q
    |||    
T  33725368 ccc 33725366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 28769973 - 28770053
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcct 206  Q
    ||||||||| | ||||||||||||||||||||||||||||||| | || ||||||||||||||||||||| ||| ||||||    
T  28769973 atcattaattaataatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaaatcaatttcct 28770053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 224
Target Start/End: Original strand, 51129179 - 51129275
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagct 224  Q
    ||||||||||||||||||||||||||||||||||||||  ||| | ||  |||||||||||||||||||||||| |||| | |||||| | ||||||||    
T  51129179 atcattaatcagtaatcaacaatttaaaaatgaatcaagtattaaaat--aaattaactttttcaaaaaagtcaatttcttaactacatcgtagaagct 51129275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 238369 - 238300
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaa 195  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  238369 atcatgaatcagtaatccacaatttaaaaatgaatcaaacattaagattaaaatcaactttttcaaaaaa 238300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 1359791 - 1359691
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||   |||||  || |||||||||| |||||| |||| |||||| ||    
T  1359791 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatc-aaattttttttttttaacaagtcagttttctgactgcaccgtagaagatc 1359693  T
Q  226 cc 227  Q
    ||    
T  1359692 cc 1359691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 3309473 - 3309538
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcaga-tcaaaattaactttttca 190  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||    
T  3309473 atcattaatcagtaatcaacaatttaaaaatgaatcaaacatttagatttaaaattaactttttca 3309538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 27227341 - 27227273
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaa 194  Q
    |||||||||||||||||||| |||||||||||||| ||||||| | |||||||||||||||| ||||||    
T  27227341 atcattaatcagtaatcaaccatttaaaaatgaattaaacattaatatcaaaattaacttttccaaaaa 27227273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 581 - 639
Target Start/End: Complemental strand, 11778331 - 11778273
Alignment:
Q  581 cattcatcaacaacttccatcttctaatgctgataaaggagatgtgagaatccaaagtc 639  Q
    |||||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  11778331 cattcatcaacggtttccatcttctaatgctgataaaggagatgtgagaatccaaagtc 11778273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 38759846 - 38759911
Alignment:
Q  162 aaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    ||||||| |||||||||||||||||||||||||||||||||   ||||| ||||||||||||||||    
T  38759846 aaacattaagatcaaaattaactttttcaaaaaagtcagttaattgactgcaccatagaagctccc 38759911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 126 - 195
Target Start/End: Original strand, 42721356 - 42721425
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaa 195  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| | |||| |||||||||||| ||||||    
T  42721356 atcattaatgagtaatcaataatttaaaaatgaatcaaacattaaaatcataattaacttttttaaaaaa 42721425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 25160952 - 25161015
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatg-aatcaaacattcagatcaaaattaacttttt 188  Q
    |||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||| ||||    
T  25160952 atcattaatcagtaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaattaacctttt 25161015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 26970858 - 26970907
Alignment:
Q  180 taactttttcaaaaaagtcagtttcctgactacaccatagaagctcccat 229  Q
    |||||||||||||||||||||||| |||||||||||||| |||| |||||    
T  26970858 taactttttcaaaaaagtcagtttactgactacaccataaaagcacccat 26970907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 30326808 - 30326751
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatg-aatcaaacattcagatcaaaattaa 182  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||| | |||||||||||    
T  30326808 atcatcaatcagtaatcaacaatttaaaaatgaaatcaaatattaaaatcaaaattaa 30326751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 7843122 - 7843165
Alignment:
Q  180 taactttttcaaaaaagtcagtttcctgactacaccatagaagc 223  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||    
T  7843122 taactttttaaaaaaagtcattttcttgactacaccatagaagc 7843165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 168
Target Start/End: Original strand, 18422971 - 18423006
Alignment:
Q  133 atcagtaatcaacaatttaaaaatgaatcaaacatt 168  Q
    |||| |||||||||||||||||||||||||||||||    
T  18422971 atcattaatcaacaatttaaaaatgaatcaaacatt 18423006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 28013040 - 28013083
Alignment:
Q  180 taactttttcaaaaaagtcagtttcctgactacaccatagaagc 223  Q
    ||||||||||||||||| || |||| ||||||||||||||||||    
T  28013040 taactttttcaaaaaagacattttcttgactacaccatagaagc 28013083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 47555092 - 47555135
Alignment:
Q  180 taactttttcaaaaaagtcagtttcctgactacaccatagaagc 223  Q
    ||||||||||||||||||||||||||| ||| |||| |||||||    
T  47555092 taactttttcaaaaaagtcagtttcctaactgcaccgtagaagc 47555135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 42663274 - 42663232
Alignment:
Q  180 taactttttcaaaaaagtcagtttcctgactacaccatagaag 222  Q
    |||||||||||||||||||| |||| ||||| |||||||||||    
T  42663274 taactttttcaaaaaagtcaatttcgtgactgcaccatagaag 42663232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 422322 - 422363
Alignment:
Q  182 actttttcaaaaaagtcagtttcctgactacaccatagaagc 223  Q
    |||||||||||||||||| |||| |||| |||||||||||||    
T  422322 actttttcaaaaaagtcattttcttgacaacaccatagaagc 422363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 10598223 - 10598264
Alignment:
Q  181 aactttttcaaaaaagtcagtttcctgactacaccatagaag 222  Q
    |||||||||||||||||||||||| ||||| |||| ||||||    
T  10598223 aactttttcaaaaaagtcagtttcttgactgcaccgtagaag 10598264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 203
Target Start/End: Original strand, 41926476 - 41926553
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagttt 203  Q
    ||||||||| | |||||||  |||||||| ||||||||||||| | |||| |||||| ||||  |||||| |||||||    
T  41926476 atcattaattaataatcaatgatttaaaattgaatcaaacattaaaatcataattaatttttaaaaaaaaatcagttt 41926553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 2e-38; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 18494160 - 18494059
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||| || ||||||    
T  18494160 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtcagtttcatgactacaccgtataagctc 18494061  T
Q  226 cc 227  Q
    ||    
T  18494060 cc 18494059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 31862176 - 31862277
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  31862176 atcattaatcagtaatcaacgatttaaaaatgaatcaaatattaagatcaaaattaactttttcaaaaaagtcagtttcccgactgcaccatagaagctc 31862275  T
Q  226 cc 227  Q
    ||    
T  31862276 cc 31862277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 43648124 - 43648024
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||| |||| |||||||||    
T  43648124 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcaatttcctgactgcaccgtagaagctc 43648025  T
Q  226 c 226  Q
    |    
T  43648024 c 43648024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 19289202 - 19289100
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||| ||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  19289202 atcattaatcagaaattaacaatttaaaaatgaattaaacattaagatcaaaattaactttttcaaaaaagtcagtttcctaactgcaccatagaagctc 19289103  T
Q  226 cca 228  Q
    |||    
T  19289102 cca 19289100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 41961164 - 41961266
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  41961164 atcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaattcagtttcctgactgcaccgtagaagctc 41961263  T
Q  226 cca 228  Q
    |||    
T  41961264 cca 41961266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 19424521 - 19424418
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||  ||||| |||| |||||||||    
T  19424521 atcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaaaagtcagtttgatgactgcaccgtagaagctc 19424422  T
Q  226 ccat 229  Q
    ||||    
T  19424421 ccat 19424418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 33660256 - 33660155
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||| ||||||||||||| ||||| |||| |||||||||    
T  33660256 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcagaaaagtcagtttcatgactgcaccgtagaagctc 33660157  T
Q  226 cc 227  Q
    ||    
T  33660156 cc 33660155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 35959216 - 35959320
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||  ||| | |||| |||||||||    
T  35959216 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcaattttttgagtgcaccgtagaagctc 35959315  T
Q  226 ccata 230  Q
    |||||    
T  35959316 ccata 35959320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 29242022 - 29241923
Alignment:
Q  128 cattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||  |||||||||||||| ||||||||||||||||    
T  29242022 cattaatcagcaatcaacaatttaaaaatgaatcaaacattaagatcataattaacttttccaaaaagttcagtttcctgactgcaccatagaagctccc 29241923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 4167246 - 4167347
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||| |||||| |||| |||||||||    
T  4167246 atcatgaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaattaactttttcaaaaaagtcaattttctgactgcaccgtagaagctc 4167345  T
Q  226 cc 227  Q
    ||    
T  4167346 cc 4167347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 44913991 - 44914090
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||  |||||| |||||| |||| |||||||||    
T  44913991 atcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaaaccagtttgctgactgcaccgtagaagctc 44914090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 140 - 227
Target Start/End: Original strand, 45328028 - 45328114
Alignment:
Q  140 atcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||    
T  45328028 atcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtcagttt-ctgactgcaccgtagaagctccc 45328114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 2325254 - 2325156
Alignment:
Q  129 attaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| ||| ||| |||||| |||| |||||||||||    
T  2325254 attaatcagtaatcaacaatttaaaaataaatcaaacattaagatcaaaattaactttttaaaaaaaatcaattttctgactgcaccgtagaagctccc 2325156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 11366259 - 11366158
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||| ||| ||| |||||| |||| |||| ||||    
T  11366259 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaaatcaattttctgactgcaccgtagatgctc 11366160  T
Q  226 cc 227  Q
    ||    
T  11366159 cc 11366158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 41465825 - 41465926
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||| |||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||| || ||| ||||||| || |||    
T  41465825 atcattaatcagcaatcaacaatttaaaattgaatcgaacattaagatcaaaattaactttttcaaaaaagtcagttttctaactgcaccatataaactc 41465924  T
Q  226 cc 227  Q
    ||    
T  41465925 cc 41465926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 4763955 - 4764057
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaac-tttttcaaaaaagtcagtttcctgactacaccatagaagct 224  Q
    ||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||| |||||  |||||||||||||||| ||| |||| ||||||||    
T  4763955 atcattaatcagtaatcaataatttaaaaatgaatcaaacattaaaatcaaaattaacttttttttaaaaagtcagtttccttactgcaccgtagaagct 4764054  T
Q  225 ccc 227  Q
    |||    
T  4764055 ccc 4764057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 7006817 - 7006739
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttc 204  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||| ||||    
T  7006817 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattatgattaaaattaactttttcaaaaaagtcattttc 7006739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 43770727 - 43770649
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttc 204  Q
    ||||||||| || |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  43770727 atcattaattagaaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtcagtttc 43770649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 26357901 - 26358002
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||| ||| || ||| ||   |||||||||    
T  26357901 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttaaaaaagtcaattttctaactgcaatgtagaagctc 26358000  T
Q  226 cc 227  Q
    ||    
T  26358001 cc 26358002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 33709111 - 33709015
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaag 222  Q
    ||||||||||| ||||||||||||||||||||||||||||||| | || ||||||||||||||||||||| ||||| || ||||| |||| ||||||    
T  33709111 atcattaatcattaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaattcagtatcatgactgcaccgtagaag 33709015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 39167242 - 39167166
Alignment:
Q  132 aatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctga 208  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  39167242 aatcagtaatcaacaatttaaaaatgaataaaacattaagattaaaattaactttttcaaaaaagtcagttttctga 39167166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 3177263 - 3177362
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||| ||| ||||||||||||||| ||||| ||||||||||| | || |||| ||||||||||||||||||||||||||||||| |||| |||||||||    
T  3177263 atcatgaataagtaatcaacaatttgaaaataaatcaaacattaaaattaaaagtaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctc 3177362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 5881853 - 5881931
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttc 204  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||    
T  5881853 atcattattcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcataaaaatcagtttc 5881931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 33902341 - 33902439
Alignment:
Q  129 attaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaac-tttttcaaaaaagtcagtttcctgactacaccatagaagctcc 226  Q
    ||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||| ||||| |||| | |||| ||||||||||    
T  33902341 attaatctgtaatcaacaatttaaaaataaatcaaacattaagatcaaaattaacttttttaaaaaaagttagttttctgattgcaccgtagaagctcc 33902439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 19500794 - 19500695
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| | |||||||||||||| | |||  ||||| ||||||||||| ||    
T  19500794 atcattaatcagtaatcaacaatttaaaaatgaatcaaatattaagatcaaaatt-attttttcaaaaaagt-aattttttgactgcaccatagaagatc 19500697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 27349827 - 27349731
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||| ||     | |||||||||||||||| ||||||||||||| ||||| |||  |||||||||    
T  27349827 atcattaatcagtaatcaacaatttaaaaatgaatcaaatat-----ttaaaattaactttttcagaaaagtcagtttcatgactgcactgtagaagctc 27349733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 31570613 - 31570529
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgact 210  Q
    |||||||||||||||||||  ||||||||||||||||| |||| | || |||||||||||||| ||||||||||||||| |||||    
T  31570613 atcattaatcagtaatcaaatatttaaaaatgaatcaatcattaaaatgaaaattaactttttaaaaaaagtcagtttcatgact 31570529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 33550859 - 33550800
Alignment:
Q  129 attaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaacttttt 188  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33550859 attaaccagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 33550800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 37906034 - 37906108
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatg-aatcaaacattcagatcaaaattaactttttcaaaaaagtca 199  Q
    |||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||||| ||||||||||||||||    
T  37906034 atcattaatcagtaattaacaatttaaaaatgaaatcaaacattaaaatcaaaattaattttttcaaaaaagtca 37906108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 13711783 - 13711853
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaag 196  Q
    |||||||||||||||||||| ||||||||||||||||| |||| | || |||||||| |||||||||||||    
T  13711783 atcattaatcagtaatcaacgatttaaaaatgaatcaatcatttaaattaaaattaattttttcaaaaaag 13711853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 41051179 - 41051083
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||| |||||||||||| |||||||||||||||||| | || |||||||| ||||||||||   ||| |||| ||||| |||| |||||||||    
T  41051179 atcattaatcaataatcaacaattcaaaaatgaatcaaacattaaaattaaaattaattttttcaaaa---tcattttcatgactgcaccgtagaagctc 41051083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 17071646 - 17071544
Alignment:
Q  131 taatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactt-tttcaaaaaagtcag-tttcctgactacaccatagaagctccca 228  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||  ||   || ||| ||||||||||| ||| |||||| |||| ||||||||||||    
T  17071646 taatcagtaatcaacaatgtaaaaatgaatcaaacattaagatcaatttttttttattttaaaaaagtcagtttttctgactgcaccgtagaagctccca 17071547  T
Q  229 taa 231  Q
    |||    
T  17071546 taa 17071544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 17054005 - 17053904
Alignment:
Q  131 taatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcag-tttcctgactacaccatagaagctcccat 229  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||  ||   || ||  |||||||||| ||| |||||| |||| |||||||||||||    
T  17054005 taatcagtaatcaacaatgtaaaaatgaatcaaacattaagatcaatttttttttattttaaaaagtcagtttttctgactgcaccgtagaagctcccat 17053906  T
Q  230 aa 231  Q
    ||    
T  17053905 aa 17053904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 203
Target Start/End: Complemental strand, 18257417 - 18257340
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagttt 203  Q
    ||||||||||||||||| ||||||| ||||||||| ||  ||| | || |||||||||||||||| ||||||||||||    
T  18257417 atcattaatcagtaatcgacaattttaaaatgaataaattattaatattaaaattaactttttcacaaaagtcagttt 18257340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 41463469 - 41463400
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaa 195  Q
    ||||||||||| |||| || |||||||||||||||||| |||| |||| |||||||||||||| ||||||    
T  41463469 atcattaatcaataattaataatttaaaaatgaatcaatcattaagattaaaattaactttttaaaaaaa 41463400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 6357160 - 6357201
Alignment:
Q  182 actttttcaaaaaagtcagtttcctgactacaccatagaagc 223  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  6357160 actttttcaaaaaagtcattttcttgactacaccatagaagc 6357201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 36642296 - 36642361
Alignment:
Q  162 aaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    ||||||| | || ||||||| ||||||||||||||||| |||| ||| | ||||||||||||||||    
T  36642296 aaacattaaaattaaaattagctttttcaaaaaagtcaatttcatgaatgcaccatagaagctccc 36642361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 4263756 - 4263704
Alignment:
Q  158 aatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgact 210  Q
    ||||||||||| |||| |||||||||||||| |||||| |||||||| |||||    
T  4263756 aatcaaacattaagattaaaattaactttttaaaaaaaatcagtttcatgact 4263704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 18514443 - 18514400
Alignment:
Q  180 taactttttcaaaaaagtcagtttcctgactacaccatagaagc 223  Q
    |||||||||||||||| |||||||||||||| |||| |||||||    
T  18514443 taactttttcaaaaaattcagtttcctgactccaccgtagaagc 18514400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 81; Significance: 1e-37; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 523 - 699
Target Start/End: Original strand, 698 - 874
Alignment:
Q  523 cacctaaactttgaatacaaatatgataacttaaaccaaattccataagctagcaactcattcatcaacaacttccatcttctaatgctgataaaggaga 622  Q
    ||||||||||||| | ||||||| || || |||| ||||||| ||||| ||| |||| ||| |||||||| |||||||||||||   |||| ||||||||    
T  698 cacctaaactttggagacaaatacgagaatttaagccaaattacataacctaacaacccatccatcaacagcttccatcttctatacctgacaaaggaga 797  T
Q  623 tgtgagaatccaaagtcctttttcctatccaattacggatcatttcttctgcctcatcacgcacatttcgactacac 699  Q
    |||||||||||| |||| ||||| ||||||||||||||||||| |||||  || |||||||| ||||||||||||||    
T  798 tgtgagaatccagagtctttttttctatccaattacggatcatatcttcaaccacatcacgcccatttcgactacac 874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 6e-36; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 1946159 - 1946260
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaac-tttttcaaaaaagtcagtttcctgactacaccatagaagct 224  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  1946159 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttcaaaaaagtcagtttcctgactgcaccgtagaagct 1946258  T
Q  225 cc 226  Q
    ||    
T  1946259 cc 1946260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 6091042 - 6090941
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| |||||| |||| |||||||||    
T  6091042 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtaagttttctgactgcaccgtagaagctc 6090943  T
Q  226 cc 227  Q
    ||    
T  6090942 cc 6090941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 20768406 - 20768509
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||| ||| |||||||||| |||| |||||||||    
T  20768406 atcattaatcagtaatcaacaatttaaaaatgaattgaacattaagatcaaaattaactttttcaaaaaaatcaatttcctgactgcaccgtagaagctc 20768505  T
Q  226 ccat 229  Q
    ||||    
T  20768506 ccat 20768509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 3879799 - 3879698
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| |||| |||||| ||    
T  3879799 atcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaaatcagtttcctgactgcaccgtagaaggtc 3879700  T
Q  226 cc 227  Q
    ||    
T  3879699 cc 3879698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 5627716 - 5627817
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| ||||| |||||| |||||||||||||| |||| |||||||||    
T  5627716 atcattaatcagtaatcaacaatttaaaaatgaatcaaatattaaaatcaaaattaatttttttaaaaaaatcagtttcctgactgcaccgtagaagctc 5627815  T
Q  226 cc 227  Q
    ||    
T  5627816 cc 5627817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 7054632 - 7054533
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||| |||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||| ||||| |||| || ||||||    
T  7054632 atcattaatcattaatcaacaatttaaagatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagtttcttgactgcaccgtaaaagctc 7054533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 7234879 - 7234789
Alignment:
Q  139 aatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctcccat 229  Q
    |||||||||||||||||| |||| |||||| |||||||||||||||||||||||||| ||| ||||||||||||||| || ||||||||||    
T  7234879 aatcaacaatttaaaaataaatcgaacattaagatcaaaattaactttttcaaaaaaatcattttcctgactacaccgtaaaagctcccat 7234789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 33892872 - 33892794
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttc 204  Q
    ||||||||||| ||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||    
T  33892872 atcattaatcaataatcaacaatttaaaaatgaatcaaacattaaggttaaaattaactttttcaaaaaagtcagtttc 33892794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 8513552 - 8513634
Alignment:
Q  133 atcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacacc 215  Q
    |||| ||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||| ||||| ||||    
T  8513552 atcattaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaagtcagtttcatgactgcacc 8513634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 581 - 696
Target Start/End: Original strand, 4928513 - 4928629
Alignment:
Q  581 cattcatcaacaacttccatcttctaatgctgataaaggagatgtgagaatccaaagtcctttttcctatccaattacggatcatttcttct-gcctcat 679  Q
    |||||||||||| |||||||  ||||| | ||| ||||||||||||||||||||||||| ||||||||||| | ||||| ||||||| || | || ||||    
T  4928513 cattcatcaacatcttccattctctaaaggtgacaaaggagatgtgagaatccaaagtcttttttcctatctagttacgaatcattttttttggcttcat 4928612  T
Q  680 cacgcacatttcgacta 696  Q
    |||||||||||||||||    
T  4928613 cacgcacatttcgacta 4928629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 29182485 - 29182563
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttc 204  Q
    |||||||||||  ||||||||||||||||||||||||| |||| |||  ||||||||||||||||||||||| ||||||    
T  29182485 atcattaatcaacaatcaacaatttaaaaatgaatcaatcattaagactaaaattaactttttcaaaaaagttagtttc 29182563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 33619164 - 33619237
Alignment:
Q  133 atcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcct 206  Q
    ||||| ||||||||||||||||||||||| |||||| |||| |||||||||||||| |||||||||| ||||||    
T  33619164 atcagcaatcaacaatttaaaaatgaatcgaacattaagattaaaattaactttttaaaaaaagtcaatttcct 33619237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 4318682 - 4318575
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaac------attcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatag 219  Q
    ||||||||||| ||||||||||||||||||| ||||||||      ||| | || ||||||||||||||||||||| |||||||| | ||| |||| |||    
T  4318682 atcattaatcattaatcaacaatttaaaaataaatcaaacattaaaattaaaattaaaattaactttttcaaaaaaatcagtttcataactgcaccgtag 4318583  T
Q  220 aagctccc 227  Q
    ||||||||    
T  4318582 aagctccc 4318575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 33724117 - 33724062
Alignment:
Q  128 cattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaac 183  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||    
T  33724117 cattaatcattaagcaacaatttaaaaatgaatcaaacattaagatcaaaattaac 33724062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 21016978 - 21016916
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaacttttt 188  Q
    ||||| |||||||||||||||||||| |||||||||||| ||| |||| ||||||||||||||    
T  21016978 atcatgaatcagtaatcaacaatttataaatgaatcaaatattaagattaaaattaacttttt 21016916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 6089227 - 6089286
Alignment:
Q  133 atcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaa 192  Q
    |||| ||||||||||||||||||||||||||||||| | || |||||||| |||||||||    
T  6089227 atcattaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaattttttcaaa 6089286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 6613704 - 6613657
Alignment:
Q  180 taactttttcaaaaaagtcagtttcctgactacaccatagaagctccc 227  Q
    ||||||||||||||||||||||||||||||| |||| || ||||||||    
T  6613704 taactttttcaaaaaagtcagtttcctgactgcaccgtacaagctccc 6613657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 21016778 - 21016722
Alignment:
Q  175 aaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctcccataa 231  Q
    |||| ||||||||||||||||| || ||| |||||| |||| |||||||||||||||    
T  21016778 aaaaataactttttcaaaaaagacaattttctgactgcaccgtagaagctcccataa 21016722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 615 - 696
Target Start/End: Complemental strand, 3340404 - 3340322
Alignment:
Q  615 aaaggagatgtgagaatccaaagtcctttttcctatccaattacggatcatttcttct-gcctcatcacgcacatttcgacta 696  Q
    |||||| ||||||||||||| | || || || ||||||| ||||||||||||| || | || ||||||||| |||||||||||    
T  3340404 aaaggaaatgtgagaatccacaatctttctttctatccagttacggatcattttttttagcttcatcacgcgcatttcgacta 3340322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 76; Significance: 9e-35; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 267606 - 267705
Alignment:
Q  132 aatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctcccataa 231  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||| |||||||||    
T  267606 aatcagtaatcaacaatttaaaaatgaatcaaatattaagatcaaaattaattttttcaaaaaagtcagtttcttgactgcaccatagaatctcccataa 267705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 8211 - 8312
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||||||||||||||||||||||||| | || | ||||||||||||||| |||||||||||| |||||||||| |||| |||||||||    
T  8211 atcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaactttatcaaaaaagtcaatttcctgactgcaccgtagaagctc 8310  T
Q  226 cc 227  Q
    ||    
T  8311 cc 8312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 145876 - 145775
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    |||||||||||||||| || ||||||||||||||| ||||||| | |||||||||||||||||||||||||||| |||||||||| |||| |||||||||    
T  145876 atcattaatcagtaataaaaaatttaaaaatgaattaaacattaaaatcaaaattaactttttcaaaaaagtcaatttcctgactgcaccgtagaagctc 145777  T
Q  226 cc 227  Q
    ||    
T  145776 cc 145775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 66; Significance: 9e-29; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 44280 - 44381
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||| ||||||| | |||||||| |||||||||||||||||||||||  ||||| || | |||||||||    
T  44280 atcattaatcagtaatcaacaatttaaaaatgaattaaacattaaaatcaaaatcaactttttcaaaaaagtcagtttgttgactgcatcgtagaagctc 44379  T
Q  226 cc 227  Q
    ||    
T  44380 cc 44381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 66; Significance: 9e-29; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 154507 - 154406
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||||||| ||||||| | |||||||| |||||||||||||||||||||||  ||||| || | |||||||||    
T  154507 atcattaatcagtaatcaacaatttaaaaatgaattaaacattaaaatcaaaatcaactttttcaaaaaagtcagtttgttgactgcatcgtagaagctc 154408  T
Q  226 cc 227  Q
    ||    
T  154407 cc 154406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 12233 - 12332
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||| |||||||| |||||| ||||| |||| |||||||||    
T  12233 atcattaatcagtaatcaacaatttaaaaat-aatcaaacattaagattaaaattaacttttttaaaaaagtaagtttcatgactgcaccgtagaagctc 12331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 54; Significance: 1e-21; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 452 - 517
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaa 191  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  452 atcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaa 517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 193
Target Start/End: Complemental strand, 408290 - 408223
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaa 193  Q
    ||||||||||||||||||||||||||||||||||||||||||| | || |||||||| ||||||||||    
T  408290 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaattttttcaaaa 408223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 93961 - 93860
Alignment:
Q  126 atcattaatcagtaatcaacaatttaaaaatgaatcaaacattcagatcaaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctc 225  Q
    ||||||||||| ||||||||||||||||| ||||||||||||| | ||||||||||||||||| ||||| ||| ||||||| ||| |||| || || |||    
T  93961 atcattaatcactaatcaacaatttaaaa-tgaatcaaacattaaaatcaaaattaacttttttaaaaaggtccgtttccttactgcaccgtaaaaactc 93863  T
Q  226 cca 228  Q
    |||    
T  93862 cca 93860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 690 - 745
Alignment:
Q  175 aaaattaactttttcaaaaaagtcagtttcctgactacaccatagaagctcccata 230  Q
    ||||||||||||||||||||| ||| |||| ||||| |||| ||||||||||||||    
T  690 aaaattaactttttcaaaaaaatcaatttcttgactgcaccgtagaagctcccata 745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 394 - 498
Target Start/End: Original strand, 77747 - 77853
Alignment:
Q  394 taaacaatagcttaacatttcataaaatagaga--gttacaagcagctagagttaactttgaaagggtattccccaacaattttgaagagccaatacaat 491  Q
    |||||||||||||||||||||||||   |||||   |||||| ||| ||| |||||| ||||| ||||||| |||||||||||||||||||||||| ||     
T  77747 taaacaatagcttaacatttcataaggcagagaatattacaaacagttagtgttaacattgaaggggtatttcccaacaattttgaagagccaatataag 77846  T
Q  492 agaaaaa 498  Q
    |||||||    
T  77847 agaaaaa 77853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 8250 - 8209
Alignment:
Q  182 actttttcaaaaaagtcagtttcctgactacaccatagaagc 223  Q
    |||||||||||||||||| |||| |||| |||||||||||||    
T  8250 actttttcaaaaaagtcattttcttgacaacaccatagaagc 8209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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