View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2242R-Insertion-7 (Length: 720)

Name: NF2242R-Insertion-7
Description: NF2242R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2242R-Insertion-7
NF2242R-Insertion-7
[»] chr8 (66 HSPs)
chr8 (8-720)||(36052646-36053358)
chr8 (190-511)||(9399813-9400130)
chr8 (235-543)||(41151406-41151705)
chr8 (191-543)||(27127876-27128211)
chr8 (235-512)||(14550034-14550309)
chr8 (413-543)||(27052409-27052540)
chr8 (386-543)||(6220362-6220519)
chr8 (378-543)||(24909574-24909740)
chr8 (390-543)||(20209442-20209596)
chr8 (390-543)||(20229150-20229304)
chr8 (387-543)||(27127879-27128032)
chr8 (192-543)||(6220184-6220521)
chr8 (409-513)||(15563876-15563980)
chr8 (190-332)||(24909605-24909744)
chr8 (387-541)||(41151585-41151741)
chr8 (191-404)||(24827355-24827564)
chr8 (191-333)||(27128075-27128214)
chr8 (367-482)||(24793024-24793139)
chr8 (191-332)||(41151403-41151541)
chr8 (390-543)||(9399817-9399970)
chr8 (409-542)||(27052599-27052729)
chr8 (367-482)||(15564001-15564115)
chr8 (195-333)||(27052598-27052729)
chr8 (413-482)||(9400092-9400161)
chr8 (378-541)||(24083206-24083365)
chr8 (399-542)||(28618828-28618974)
chr8 (413-491)||(6220448-6220526)
chr8 (236-334)||(20209459-20209557)
chr8 (236-334)||(20229167-20229265)
chr8 (387-543)||(24827358-24827515)
chr8 (353-429)||(22813456-22813532)
chr8 (191-328)||(27052406-27052540)
chr8 (419-476)||(14549967-14550024)
chr8 (190-316)||(6220180-6220303)
chr8 (196-333)||(9400026-9400161)
chr8 (192-310)||(16913000-16913115)
chr8 (420-483)||(41151679-41151742)
chr8 (254-332)||(36053048-36053126)
chr8 (255-328)||(6220182-6220255)
chr8 (409-511)||(14550210-14550314)
chr8 (413-482)||(38414597-38414665)
chr8 (259-316)||(41151684-41151741)
chr8 (387-542)||(27855559-27855715)
chr8 (409-543)||(36052833-36052971)
chr8 (385-496)||(14895121-14895230)
chr8 (196-309)||(24083256-24083365)
chr8 (190-440)||(27855554-27855799)
chr8 (267-330)||(29427958-29428021)
chr8 (411-474)||(29427958-29428021)
chr8 (360-486)||(9089967-9090093)
chr8 (429-574)||(16912971-16913117)
chr8 (416-450)||(20209299-20209333)
chr8 (250-316)||(20209537-20209603)
chr8 (416-450)||(20229007-20229041)
chr8 (250-316)||(20229245-20229311)
chr8 (360-454)||(29386183-29386281)
chr8 (256-325)||(20209268-20209333)
chr8 (376-452)||(20209353-20209429)
chr8 (256-325)||(20228976-20229041)
chr8 (376-452)||(20229061-20229137)
chr8 (245-333)||(28618837-28618925)
chr8 (255-322)||(14549957-14550024)
chr8 (253-328)||(16912998-16913073)
chr8 (383-452)||(38414956-38415026)
chr8 (413-454)||(14550276-14550317)
chr8 (259-316)||(24083122-24083179)
[»] chr3 (120 HSPs)
chr3 (193-543)||(25848287-25848634)
chr3 (190-504)||(32186459-32186769)
chr3 (235-511)||(40286277-40286550)
chr3 (236-543)||(47891149-47891456)
chr3 (209-454)||(43650000-43650242)
chr3 (357-539)||(28813843-28814025)
chr3 (342-509)||(5442491-5442659)
chr3 (190-482)||(47069525-47069803)
chr3 (190-333)||(47891320-47891460)
chr3 (367-511)||(36900033-36900177)
chr3 (378-514)||(40209707-40209841)
chr3 (357-511)||(27768340-27768494)
chr3 (254-543)||(47573696-47573974)
chr3 (386-543)||(50332612-50332769)
chr3 (190-333)||(18020022-18020162)
chr3 (378-543)||(18019992-18020158)
chr3 (192-332)||(25848499-25848636)
chr3 (409-538)||(40286244-40286374)
chr3 (378-543)||(26724181-26724346)
chr3 (402-541)||(46337505-46337645)
chr3 (390-512)||(47891142-47891264)
chr3 (402-543)||(7607680-7607820)
chr3 (420-540)||(30954957-30955078)
chr3 (420-540)||(30970769-30970890)
chr3 (413-482)||(47069531-47069600)
chr3 (357-482)||(51833356-51833481)
chr3 (418-543)||(25848568-25848695)
chr3 (387-538)||(43649990-43650142)
chr3 (399-490)||(47573887-47573977)
chr3 (402-542)||(252048-252189)
chr3 (258-327)||(252048-252117)
chr3 (387-488)||(14964887-14964987)
chr3 (387-543)||(25848288-25848445)
chr3 (413-486)||(46337501-46337574)
chr3 (388-543)||(32186463-32186619)
chr3 (254-482)||(36667141-36667359)
chr3 (249-332)||(14964883-14964965)
chr3 (387-482)||(26724073-26724168)
chr3 (377-542)||(36374805-36374971)
chr3 (394-543)||(47069529-47069679)
chr3 (394-542)||(39714545-39714694)
chr3 (195-333)||(252048-252183)
chr3 (237-333)||(32186673-32186769)
chr3 (235-334)||(40286448-40286545)
chr3 (367-482)||(26976379-26976494)
chr3 (201-333)||(28813846-28813974)
chr3 (190-310)||(28814021-28814138)
chr3 (394-511)||(13902990-13903107)
chr3 (388-489)||(36667260-36667361)
chr3 (378-454)||(45131523-45131600)
chr3 (463-542)||(3169715-3169795)
chr3 (387-451)||(40209854-40209918)
chr3 (192-302)||(50332664-50332771)
chr3 (386-469)||(3169544-3169627)
chr3 (403-482)||(26976491-26976570)
chr3 (416-482)||(13903072-13903138)
chr3 (409-482)||(39541429-39541503)
chr3 (394-476)||(42866077-42866159)
chr3 (255-333)||(47069729-47069807)
chr3 (255-332)||(26976497-26976574)
chr3 (431-543)||(28814021-28814134)
chr3 (413-482)||(28814063-28814132)
chr3 (259-328)||(36667385-36667454)
chr3 (195-333)||(27768308-27768443)
chr3 (413-485)||(28813838-28813909)
chr3 (429-529)||(42865922-42866021)
chr3 (255-331)||(45131438-45131514)
chr3 (378-489)||(14624103-14624213)
chr3 (190-316)||(25848575-25848699)
chr3 (254-332)||(14624105-14624182)
chr3 (402-535)||(36374997-36375128)
chr3 (413-482)||(36667385-36667454)
chr3 (413-482)||(40286512-40286581)
chr3 (189-332)||(46337498-46337638)
chr3 (413-478)||(47891116-47891181)
chr3 (394-459)||(50332519-50332584)
chr3 (255-328)||(50332698-50332771)
chr3 (399-451)||(14624238-14624290)
chr3 (410-482)||(45131442-45131514)
chr3 (236-332)||(47573735-47573831)
chr3 (191-307)||(26724238-26724349)
chr3 (235-333)||(39714559-39714658)
chr3 (376-451)||(54343350-54343424)
chr3 (235-316)||(30954962-30955044)
chr3 (235-316)||(30970774-30970856)
chr3 (255-309)||(39541453-39541507)
chr3 (250-328)||(46337496-46337574)
chr3 (256-333)||(13903004-13903081)
chr3 (255-332)||(26724069-26724146)
chr3 (255-328)||(28814063-28814136)
chr3 (258-327)||(36900140-36900209)
chr3 (413-482)||(40209938-40210005)
chr3 (193-234)||(43650292-43650333)
chr3 (255-328)||(47573694-47573767)
chr3 (255-331)||(26976375-26976451)
chr3 (195-309)||(36374805-36374916)
chr3 (414-482)||(36900140-36900208)
chr3 (258-310)||(39253793-39253845)
chr3 (444-539)||(45131641-45131737)
chr3 (473-543)||(13903009-13903080)
chr3 (377-420)||(16106754-16106797)
chr3 (473-540)||(27657986-27658053)
chr3 (195-268)||(28813899-28813969)
chr3 (258-332)||(40209876-40209948)
chr3 (261-332)||(42866092-42866163)
chr3 (265-328)||(47891118-47891181)
chr3 (235-309)||(5442494-5442568)
chr3 (413-482)||(25848623-25848693)
chr3 (413-451)||(30955011-30955049)
chr3 (413-451)||(30970823-30970861)
chr3 (413-459)||(32186738-32186784)
chr3 (235-333)||(40209715-40209811)
chr3 (262-328)||(40286244-40286310)
chr3 (439-489)||(41165798-41165848)
chr3 (262-328)||(43649990-43650056)
chr3 (381-482)||(3377031-3377132)
chr3 (473-542)||(14624252-14624321)
chr3 (255-316)||(26724287-26724348)
chr3 (445-541)||(36667357-36667454)
chr3 (413-482)||(43650261-43650330)
[»] chr2 (68 HSPs)
chr2 (255-543)||(25894964-25895252)
chr2 (258-511)||(31630127-31630377)
chr2 (190-542)||(5009160-5009512)
chr2 (387-543)||(31630068-31630223)
chr2 (236-511)||(3876768-3877041)
chr2 (394-543)||(5009360-5009508)
chr2 (378-543)||(44556526-44556692)
chr2 (195-371)||(29379855-29380028)
chr2 (378-482)||(36694484-36694588)
chr2 (360-451)||(11791751-11791842)
chr2 (409-542)||(29379894-29380028)
chr2 (425-543)||(36217161-36217277)
chr2 (368-482)||(4188973-4189087)
chr2 (201-391)||(4511397-4511582)
chr2 (68-160)||(37622864-37622957)
chr2 (61-160)||(8975137-8975237)
chr2 (387-511)||(9500939-9501063)
chr2 (367-450)||(4188657-4188740)
chr2 (209-482)||(12612449-12612724)
chr2 (378-543)||(30265381-30265546)
chr2 (404-482)||(43699435-43699513)
chr2 (404-511)||(1316069-1316176)
chr2 (367-541)||(14166348-14166521)
chr2 (413-541)||(36217208-36217331)
chr2 (409-537)||(4511396-4511524)
chr2 (191-327)||(44556523-44556656)
chr2 (192-333)||(25895116-25895254)
chr2 (388-511)||(39442268-39442391)
chr2 (387-505)||(3876768-3876885)
chr2 (253-327)||(25895182-25895256)
chr2 (413-482)||(1316038-1316107)
chr2 (378-451)||(8035440-8035513)
chr2 (414-487)||(25895182-25895255)
chr2 (393-543)||(33847619-33847769)
chr2 (255-332)||(43699440-43699517)
chr2 (192-316)||(36217161-36217279)
chr2 (254-328)||(36217208-36217280)
chr2 (193-333)||(1316035-1316172)
chr2 (259-333)||(11791380-11791454)
chr2 (258-332)||(36694515-36694589)
chr2 (409-482)||(25894968-25895041)
chr2 (375-451)||(4511942-4512018)
chr2 (236-332)||(39442274-39442370)
chr2 (253-304)||(29379982-29380033)
chr2 (219-332)||(31630277-31630385)
chr2 (190-332)||(5009155-5009299)
chr2 (235-333)||(9500944-9501042)
chr2 (413-491)||(31630339-31630417)
chr2 (236-333)||(3876938-3877035)
chr2 (255-316)||(9500904-9500965)
chr2 (255-316)||(33847710-33847771)
chr2 (255-328)||(44556524-44556597)
chr2 (191-333)||(30265378-30265516)
chr2 (258-310)||(31630357-31630409)
chr2 (368-423)||(14166022-14166077)
chr2 (259-333)||(11791799-11791873)
chr2 (258-332)||(12612448-12612522)
chr2 (413-482)||(9500908-9500977)
chr2 (425-486)||(14166464-14166525)
chr2 (418-491)||(30265374-30265447)
chr2 (387-451)||(36694406-36694471)
chr2 (399-451)||(11791411-11791463)
chr2 (357-451)||(6694122-6694217)
chr2 (484-543)||(31630291-31630350)
chr2 (414-476)||(12612669-12612731)
chr2 (427-481)||(39442508-39442562)
chr2 (357-410)||(6694407-6694460)
chr2 (402-486)||(12001798-12001880)
[»] chr4 (103 HSPs)
chr4 (192-541)||(40146955-40147300)
chr4 (188-537)||(12592187-12592532)
chr4 (190-543)||(41083051-41083390)
chr4 (193-543)||(2469899-2470244)
chr4 (195-541)||(2787889-2788229)
chr4 (192-511)||(53863351-53863657)
chr4 (387-565)||(45038355-45038534)
chr4 (192-512)||(51950511-51950817)
chr4 (196-541)||(25055884-25056230)
chr4 (235-541)||(45787062-45787365)
chr4 (254-543)||(11884616-11884894)
chr4 (387-543)||(53863497-53863655)
chr4 (387-540)||(12498623-12498778)
chr4 (386-541)||(12592368-12592524)
chr4 (404-543)||(41083055-41083195)
chr4 (235-543)||(12498659-12498956)
chr4 (259-483)||(41519203-41519426)
chr4 (253-541)||(50290180-50290472)
chr4 (342-543)||(55617486-55617686)
chr4 (342-543)||(55624790-55624990)
chr4 (356-482)||(17231991-17232117)
chr4 (193-333)||(45038376-45038513)
chr4 (254-480)||(40395157-40395371)
chr4 (390-543)||(2469900-2470052)
chr4 (431-543)||(21321993-21322106)
chr4 (399-511)||(40395133-40395245)
chr4 (393-543)||(7246209-7246360)
chr4 (386-576)||(40147140-40147331)
chr4 (50-160)||(46672761-46672872)
chr4 (425-542)||(2788111-2788229)
chr4 (190-496)||(9999338-9999628)
chr4 (394-542)||(9999476-9999623)
chr4 (195-332)||(26782291-26782428)
chr4 (254-328)||(40147227-40147301)
chr4 (234-412)||(24369186-24369363)
chr4 (393-482)||(26782478-26782567)
chr4 (378-505)||(26782332-26782459)
chr4 (190-327)||(7245989-7246123)
chr4 (192-333)||(12498820-12498958)
chr4 (393-511)||(24369249-24369367)
chr4 (400-541)||(46196113-46196255)
chr4 (190-334)||(11884612-11884754)
chr4 (190-333)||(41083254-41083394)
chr4 (404-513)||(44057260-44057368)
chr4 (259-328)||(50290403-50290472)
chr4 (235-332)||(53863356-53863453)
chr4 (387-541)||(25056073-25056230)
chr4 (414-543)||(7245993-7246123)
chr4 (390-543)||(51950663-51950815)
chr4 (190-316)||(2470125-2470248)
chr4 (256-328)||(7246289-7246361)
chr4 (413-542)||(45038191-45038318)
chr4 (382-509)||(46196292-46196419)
chr4 (404-490)||(11884811-11884897)
chr4 (413-487)||(12498885-12498959)
chr4 (413-482)||(7245995-7246064)
chr4 (388-543)||(24684228-24684381)
chr4 (255-328)||(24684311-24684383)
chr4 (414-482)||(2788160-2788228)
chr4 (192-314)||(21321989-21322108)
chr4 (253-305)||(25056184-25056236)
chr4 (196-333)||(45787234-45787365)
chr4 (415-483)||(45787299-45787366)
chr4 (253-328)||(12498885-12498960)
chr4 (258-333)||(17231990-17232065)
chr4 (253-328)||(21322035-21322110)
chr4 (399-542)||(24684054-24684194)
chr4 (196-333)||(50290340-50290472)
chr4 (257-332)||(55617553-55617627)
chr4 (257-332)||(55624857-55624931)
chr4 (413-487)||(21322035-21322109)
chr4 (235-333)||(44057264-44057361)
chr4 (191-333)||(9999287-9999426)
chr4 (436-543)||(7246053-7246161)
chr4 (409-543)||(41519353-41519489)
chr4 (255-307)||(41519439-41519491)
chr4 (254-332)||(2787945-2788021)
chr4 (473-543)||(24369269-24369340)
chr4 (190-333)||(24684248-24684385)
chr4 (473-543)||(26782498-26782569)
chr4 (409-512)||(45787056-45787159)
chr4 (262-328)||(45038252-45038318)
chr4 (235-301)||(46196149-46196215)
chr4 (255-328)||(7245991-7246064)
chr4 (255-332)||(26782494-26782571)
chr4 (259-316)||(40146955-40147012)
chr4 (255-328)||(46196383-46196456)
chr4 (368-451)||(40119549-40119633)
chr4 (235-295)||(45038285-45038345)
chr4 (254-309)||(11966795-11966850)
chr4 (253-316)||(53863596-53863659)
chr4 (193-370)||(7246188-7246361)
chr4 (255-301)||(14984063-14984109)
chr4 (413-487)||(25056161-25056235)
chr4 (196-332)||(40146955-40147087)
chr4 (255-333)||(40395299-40395377)
chr4 (258-308)||(45038191-45038241)
chr4 (290-332)||(51950564-51950606)
chr4 (276-333)||(12592259-12592316)
chr4 (255-316)||(17236773-17236834)
chr4 (259-328)||(25055884-25055953)
chr4 (255-328)||(40395098-40395171)
chr4 (413-482)||(40395102-40395171)
[»] chr7 (77 HSPs)
chr7 (259-541)||(4048205-4048487)
chr7 (191-543)||(27280615-27280948)
chr7 (386-541)||(11975451-11975606)
chr7 (255-542)||(6694533-6694808)
chr7 (190-482)||(40951629-40951918)
chr7 (342-497)||(3198259-3198414)
chr7 (378-543)||(27576501-27576667)
chr7 (378-543)||(29710490-29710656)
chr7 (254-476)||(43258302-43258522)
chr7 (367-543)||(30869559-30869736)
chr7 (393-568)||(42312735-42312911)
chr7 (390-543)||(44293954-44294108)
chr7 (378-511)||(22750350-22750483)
chr7 (413-543)||(29710321-29710451)
chr7 (388-534)||(4048393-4048539)
chr7 (382-511)||(11975614-11975744)
chr7 (342-513)||(26185890-26186064)
chr7 (378-451)||(29019342-29019415)
chr7 (402-482)||(6694724-6694804)
chr7 (191-370)||(42312757-42312932)
chr7 (245-334)||(3198260-3198349)
chr7 (404-543)||(41666145-41666285)
chr7 (193-334)||(30869599-30869737)
chr7 (425-512)||(42313008-42313095)
chr7 (414-511)||(27280815-27280912)
chr7 (387-492)||(43258297-43258402)
chr7 (190-328)||(29710317-29710451)
chr7 (253-328)||(27576596-27576671)
chr7 (192-332)||(27576532-27576669)
chr7 (91-160)||(33254420-33254490)
chr7 (236-334)||(44293971-44294069)
chr7 (190-333)||(27280611-27280751)
chr7 (413-482)||(27280874-27280943)
chr7 (256-332)||(6069262-6069338)
chr7 (255-310)||(3198458-3198513)
chr7 (254-333)||(11975505-11975584)
chr7 (259-334)||(40951843-40951918)
chr7 (194-482)||(41666145-41666418)
chr7 (368-482)||(6068715-6068829)
chr7 (426-543)||(6222081-6222198)
chr7 (413-487)||(27576596-27576670)
chr7 (192-332)||(29710521-29710658)
chr7 (409-482)||(6069262-6069335)
chr7 (255-328)||(31453047-31453120)
chr7 (235-316)||(42313008-42313089)
chr7 (195-333)||(6694533-6694667)
chr7 (254-332)||(11975641-11975720)
chr7 (253-328)||(29710585-29710660)
chr7 (235-302)||(30662194-30662261)
chr7 (414-487)||(6222078-6222150)
chr7 (386-511)||(40951666-40951789)
chr7 (413-476)||(3198222-3198283)
chr7 (367-487)||(26978282-26978402)
chr7 (253-316)||(6222077-6222140)
chr7 (416-450)||(44293811-44293845)
chr7 (250-316)||(44294049-44294115)
chr7 (471-543)||(31453045-31453118)
chr7 (413-482)||(31453047-31453116)
chr7 (413-482)||(46713214-46713282)
chr7 (256-325)||(44293780-44293845)
chr7 (376-452)||(44293865-44293941)
chr7 (290-333)||(29019342-29019385)
chr7 (255-334)||(41666343-41666422)
chr7 (492-569)||(3198459-3198537)
chr7 (368-422)||(22026410-22026464)
chr7 (235-329)||(22750355-22750449)
chr7 (357-451)||(23164048-23164142)
chr7 (413-487)||(29710585-29710659)
chr7 (420-482)||(40081194-40081256)
chr7 (413-451)||(42313056-42313094)
chr7 (473-542)||(46713272-46713342)
chr7 (192-315)||(6222079-6222198)
chr7 (255-328)||(11975706-11975779)
chr7 (413-482)||(11975706-11975775)
chr7 (415-512)||(30662188-30662284)
chr7 (413-482)||(30869412-30869481)
chr7 (413-482)||(40951635-40951703)
[»] chr6 (45 HSPs)
chr6 (190-543)||(21598442-21598782)
chr6 (190-482)||(35225395-35225683)
chr6 (342-543)||(24059668-24059868)
chr6 (378-574)||(17136814-17137011)
chr6 (290-543)||(363988-364241)
chr6 (236-543)||(9982710-9983006)
chr6 (387-511)||(17342620-17342744)
chr6 (378-543)||(10356432-10356598)
chr6 (402-543)||(35225399-35225541)
chr6 (386-511)||(9982704-9982829)
chr6 (190-333)||(21598646-21598786)
chr6 (254-451)||(17342534-17342720)
chr6 (388-543)||(21598446-21598602)
chr6 (413-543)||(10356262-10356393)
chr6 (254-333)||(24059723-24059802)
chr6 (190-333)||(9982870-9983010)
chr6 (191-505)||(13273066-13273362)
chr6 (393-543)||(13273069-13273217)
chr6 (190-328)||(10356258-10356393)
chr6 (191-332)||(10356463-10356601)
chr6 (380-482)||(2761574-2761676)
chr6 (413-482)||(9982673-9982742)
chr6 (387-451)||(2761495-2761559)
chr6 (191-333)||(17136842-17136981)
chr6 (414-482)||(35050847-35050915)
chr6 (194-311)||(35050803-35050917)
chr6 (408-482)||(364198-364271)
chr6 (256-329)||(13273270-13273342)
chr6 (413-482)||(35050731-35050800)
chr6 (367-482)||(3848551-3848666)
chr6 (257-328)||(35050731-35050802)
chr6 (431-545)||(35050804-35050919)
chr6 (413-482)||(17342706-17342775)
chr6 (254-334)||(364044-364123)
chr6 (237-300)||(19557872-19557935)
chr6 (255-333)||(2761602-2761680)
chr6 (258-328)||(17342706-17342776)
chr6 (257-327)||(35050847-35050917)
chr6 (387-488)||(13812241-13812342)
chr6 (367-451)||(31091261-31091345)
chr6 (255-303)||(3848547-3848595)
chr6 (387-454)||(35050627-35050694)
chr6 (254-332)||(13812242-13812320)
chr6 (259-328)||(9982673-9982742)
chr6 (413-470)||(19557904-19557961)
[»] chr5 (122 HSPs)
chr5 (191-512)||(1996175-1996492)
chr5 (193-543)||(16327099-16327434)
chr5 (190-475)||(5746091-5746374)
chr5 (192-543)||(35461437-35461774)
chr5 (192-539)||(17400550-17400885)
chr5 (387-543)||(16327278-16327433)
chr5 (235-541)||(10827146-10827440)
chr5 (399-543)||(28559236-28559381)
chr5 (378-511)||(12713055-12713190)
chr5 (378-511)||(12774319-12774454)
chr5 (263-543)||(28559302-28559572)
chr5 (357-476)||(7209857-7209976)
chr5 (376-543)||(25456277-25456444)
chr5 (190-334)||(20927842-20927983)
chr5 (388-543)||(35461616-35461772)
chr5 (403-542)||(25456470-25456609)
chr5 (235-447)||(35813386-35813596)
chr5 (202-543)||(23661888-23662215)
chr5 (362-452)||(36759696-36759786)
chr5 (382-511)||(20927879-20928008)
chr5 (377-508)||(14604102-14604234)
chr5 (191-333)||(16327096-16327235)
chr5 (378-511)||(4943069-4943204)
chr5 (287-543)||(35811996-35812252)
chr5 (235-332)||(25456314-25456411)
chr5 (403-511)||(5746129-5746237)
chr5 (237-333)||(28559436-28559532)
chr5 (393-542)||(23661881-23662029)
chr5 (393-542)||(23796541-23796689)
chr5 (192-323)||(32361167-32361295)
chr5 (189-332)||(35461432-35461572)
chr5 (387-541)||(1996332-1996487)
chr5 (357-452)||(7210214-7210309)
chr5 (409-512)||(14604267-14604370)
chr5 (388-543)||(17400725-17400883)
chr5 (413-488)||(32361165-32361240)
chr5 (425-542)||(19550101-19550219)
chr5 (399-543)||(32361169-32361314)
chr5 (236-334)||(4943098-4943198)
chr5 (413-543)||(4943166-4943298)
chr5 (374-482)||(36760764-36760872)
chr5 (378-490)||(37642849-37642961)
chr5 (257-328)||(23662144-23662215)
chr5 (235-334)||(28022147-28022246)
chr5 (254-328)||(17400812-17400886)
chr5 (387-481)||(38682784-38682878)
chr5 (256-333)||(7209848-7209925)
chr5 (413-490)||(17400812-17400889)
chr5 (413-482)||(40980714-40980783)
chr5 (418-514)||(1649341-1649436)
chr5 (386-482)||(20181404-20181500)
chr5 (409-508)||(28022149-28022248)
chr5 (387-490)||(33491567-33491670)
chr5 (192-293)||(40980710-40980808)
chr5 (235-332)||(14604104-14604202)
chr5 (235-297)||(20928052-20928114)
chr5 (254-328)||(32361166-32361240)
chr5 (250-316)||(35461430-35461496)
chr5 (409-511)||(37642995-37643097)
chr5 (191-333)||(10827305-10827445)
chr5 (413-482)||(19550102-19550171)
chr5 (259-328)||(20928081-20928150)
chr5 (413-482)||(20928081-20928150)
chr5 (255-328)||(40980710-40980783)
chr5 (88-159)||(4841789-4841861)
chr5 (409-509)||(10827143-10827241)
chr5 (413-482)||(14604072-14604137)
chr5 (357-489)||(19550228-19550359)
chr5 (394-541)||(35813485-35813632)
chr5 (192-333)||(1996141-1996279)
chr5 (195-316)||(19550101-19550219)
chr5 (194-302)||(23662109-23662215)
chr5 (257-316)||(23796373-23796432)
chr5 (409-482)||(6588074-6588144)
chr5 (264-391)||(10074068-10074194)
chr5 (420-486)||(10827378-10827444)
chr5 (236-450)||(33491552-33491754)
chr5 (256-334)||(36760797-36760875)
chr5 (235-316)||(1649407-1649487)
chr5 (256-317)||(4943238-4943299)
chr5 (235-308)||(12713112-12713185)
chr5 (235-308)||(12774376-12774449)
chr5 (425-482)||(23796375-23796432)
chr5 (202-332)||(23796557-23796682)
chr5 (260-406)||(38682733-38682878)
chr5 (413-464)||(5746116-5746167)
chr5 (258-309)||(25456499-25456550)
chr5 (356-451)||(35187994-35188089)
chr5 (427-482)||(38680633-38680688)
chr5 (342-469)||(40980855-40980981)
chr5 (413-543)||(1649396-1649523)
chr5 (193-328)||(4943166-4943299)
chr5 (259-333)||(5746307-5746381)
chr5 (261-307)||(10074211-10074257)
chr5 (258-328)||(25456540-25456609)
chr5 (413-487)||(35812181-35812255)
chr5 (413-482)||(1996145-1996214)
chr5 (193-268)||(7209848-7209920)
chr5 (413-482)||(20927848-20927917)
chr5 (255-328)||(25456275-25456347)
chr5 (409-482)||(35811968-35812041)
chr5 (478-543)||(35813509-35813574)
chr5 (259-307)||(13170001-13170048)
chr5 (250-302)||(28559229-28559281)
chr5 (191-305)||(38680628-38680734)
chr5 (494-541)||(13170001-13170048)
chr5 (282-333)||(14604266-14604317)
chr5 (208-333)||(37642994-37643116)
chr5 (253-308)||(37643079-37643134)
chr5 (258-328)||(12713152-12713222)
chr5 (258-328)||(12774416-12774486)
chr5 (235-333)||(17400584-17400681)
chr5 (258-328)||(19550101-19550171)
chr5 (255-301)||(19550359-19550405)
chr5 (258-328)||(23661881-23661951)
chr5 (258-328)||(23796619-23796689)
chr5 (259-325)||(35813566-35813632)
chr5 (413-451)||(37032963-37033001)
chr5 (235-333)||(37642833-37642931)
chr5 (434-510)||(13169972-13170048)
chr5 (255-328)||(28559501-28559574)
chr5 (416-485)||(35813566-35813635)
[»] scaffold0018 (5 HSPs)
scaffold0018 (190-543)||(161401-161741)
scaffold0018 (393-543)||(161405-161556)
scaffold0018 (192-332)||(161606-161743)
scaffold0018 (413-487)||(161670-161744)
scaffold0018 (253-316)||(161682-161745)
[»] chr1 (53 HSPs)
chr1 (235-452)||(52913178-52913395)
chr1 (259-511)||(1173075-1173316)
chr1 (236-482)||(2633185-2633430)
chr1 (258-482)||(18981052-18981273)
chr1 (191-543)||(33650399-33650740)
chr1 (387-511)||(52913173-52913298)
chr1 (378-543)||(26879571-26879737)
chr1 (388-490)||(18608633-18608735)
chr1 (358-541)||(38698857-38699036)
chr1 (360-452)||(41007425-41007517)
chr1 (413-511)||(7489933-7490031)
chr1 (240-541)||(18608622-18608913)
chr1 (63-160)||(29702482-29702580)
chr1 (430-543)||(7489960-7490074)
chr1 (357-511)||(40892457-40892602)
chr1 (420-516)||(18204925-18205020)
chr1 (413-476)||(40892564-40892627)
chr1 (196-328)||(7489902-7490031)
chr1 (255-329)||(33650397-33650471)
chr1 (255-328)||(26879666-26879739)
chr1 (403-511)||(33650595-33650704)
chr1 (359-456)||(41007081-41007177)
chr1 (192-310)||(7489958-7490073)
chr1 (191-333)||(40892500-40892638)
chr1 (409-543)||(50727572-50727708)
chr1 (254-309)||(2633547-2633602)
chr1 (409-512)||(18981024-18981126)
chr1 (418-541)||(52913034-52913160)
chr1 (388-489)||(2633201-2633302)
chr1 (190-328)||(33650395-33650531)
chr1 (387-451)||(1173105-1173168)
chr1 (191-309)||(26879625-26879740)
chr1 (256-316)||(50727649-50727709)
chr1 (413-461)||(52913163-52913211)
chr1 (413-484)||(7489900-7489971)
chr1 (253-331)||(34173315-34173393)
chr1 (190-316)||(52913028-52913153)
chr1 (259-328)||(18608844-18608913)
chr1 (410-487)||(34173316-34173393)
chr1 (255-332)||(41007051-41007127)
chr1 (359-423)||(38699114-38699178)
chr1 (473-542)||(2633361-2633431)
chr1 (412-482)||(33650665-33650735)
chr1 (425-490)||(2633540-2633605)
chr1 (258-334)||(2633355-2633431)
chr1 (237-333)||(18608779-18608875)
chr1 (413-476)||(1173278-1173341)
chr1 (467-514)||(30611920-30611967)
chr1 (404-487)||(36956472-36956555)
chr1 (253-332)||(36956477-36956556)
chr1 (277-328)||(52913160-52913211)
chr1 (473-574)||(52913356-52913458)
chr1 (484-541)||(1173075-1173132)
[»] scaffold0279 (4 HSPs)
scaffold0279 (378-543)||(1105-1271)
scaffold0279 (253-328)||(1200-1275)
scaffold0279 (192-332)||(1136-1273)
scaffold0279 (413-487)||(1200-1274)
[»] scaffold0128 (3 HSPs)
scaffold0128 (257-451)||(2475-2667)
scaffold0128 (399-536)||(2583-2720)
scaffold0128 (255-333)||(2440-2518)
[»] scaffold0157 (5 HSPs)
scaffold0157 (387-540)||(21699-21854)
scaffold0157 (235-543)||(21521-21818)
scaffold0157 (192-333)||(21519-21657)
scaffold0157 (413-487)||(21518-21592)
scaffold0157 (253-328)||(21517-21592)
[»] scaffold0002 (5 HSPs)
scaffold0002 (373-541)||(12212-12377)
scaffold0002 (409-543)||(12052-12184)
scaffold0002 (190-334)||(12048-12186)
scaffold0002 (190-309)||(12270-12383)
scaffold0002 (425-486)||(12322-12381)
[»] scaffold0578 (4 HSPs)
scaffold0578 (463-542)||(2436-2517)
scaffold0578 (412-482)||(2445-2516)
scaffold0578 (190-310)||(2400-2522)
scaffold0578 (258-329)||(2445-2517)
[»] scaffold0380 (1 HSPs)
scaffold0380 (88-161)||(5003-5077)
[»] scaffold1191 (1 HSPs)
scaffold1191 (463-541)||(1243-1322)


Alignment Details
Target: chr8 (Bit Score: 585; Significance: 0; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 585; E-Value: 0
Query Start/End: Original strand, 8 - 720
Target Start/End: Original strand, 36052646 - 36053358
Alignment:
Q  8 actgaaaacattggtgcaaagggcaccttgcactaaccaccaggacacaattaataagtaatcataatctgcaataaatgatatttatcatataccttta 107  Q
    |||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  36052646 actgaaaacattggtgcaaagggcacctagcactaaccactgggacacaattaataagtaatcataatttgcactaaatgatatttatcatataccttta 36052745  T
Q  108 aactattataggtgtatatacctgttaaaaataggtaataatctggtgtggcacttcctcaatatggatccgcctctgcatcggg-tcctttatgtttga 206  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  36052746 aactattataggtgtatatacctattaaaaatgggtaataatctggtgtggcacttcctcaatatggatccgcccctgcatcggggtcctttatgtttga 36052845  T
Q  207 agtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtc 306  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| ||||||| ||||||||||||    
T  36052846 agtttgtaataaattgatcttttaagttgttattttgatcacacacgagtcctttaagtttgaagtttacaacagattgatcatttatgttattttggtc 36052945  T
Q  307 acacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaa 406  Q
    ||||||||||||||||||||||||||||       |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36052946 acacgtaagttgtttaagtttgtaaacattttttgatttagtccttctgtcacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaa 36053045  T
Q  407 cttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataac 506  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36053046 cttttacaaacttaaagaacttatgtgtgactaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataac 36053145  T
Q  507 ttaaaaacaaatttattacaaacgtcaaacttaaaggttattcggtgtaacttagcctaaaaaataataccagttgaaataagagtgttaagagtgagtg 606  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36053146 ttaaaaacaaatttattacaaacgtcaaacttaaagattcttcggtgtaagttagcctaaaaaataataccagttgaaataagagtgtt-agagtgagtg 36053244  T
Q  607 atgttgaaactactcatacaataccagttcaaattattgcgttaactgaaccatcttttaaaatcagtagtttactgataccgtttttgctctctcccta 706  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  36053245 atgttgaaactactcatagaataccagttcaaattattgcgttaactgaaccatcttttaaaatcagtagtttactaataccgtttttgctctctcccta 36053344  T
Q  707 ccgctctccctcat 720  Q
    || |||||||||||    
T  36053345 cccctctccctcat 36053358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 190 - 511
Target Start/End: Original strand, 9399813 - 9400130
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| |||||| |||||||| | |||| |  ||||||||   | |||| ||||||   |||||||||||||| |||||| ||| | | ||        
T  9399813 gggtcctttaagtttgaggtttgtaacatattggttctttaagtt---actttggtcacacgtaagtcctttaagtttaaggtttgtaatagagtgactc 9399909  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacag 389  Q
    ||||||||||||||||||||| |||| | |||||| |||||||||       |||||||| || | |||||| ||||||||||||||||||||||||| |    
T  9399910 tttaagttattttggtcacacataagct-tttaagattgtaaacattttca-atttagtcattatgccacatgatcatttttgtaatgtttggttaacgg 9400007  T
Q  390 aatgactagattgaaaacttttacaaactt-aaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgactt 488  Q
    |||||||| ||||||||  ||||||||||| |||| |||||||||||||||||||||||||||||| ||| ||  ||||||||||||| | |||  | ||    
T  9400008 aatgactaaattgaaaaggtttacaaacttaaaaggacttatgtgtgaccaaaataacttaaaggaccaacatgctacaaacctcaaactcaaagaattt 9400107  T
Q  489 atatgtgactaaaataacttaaa 511  Q
    || |||||| |||||||||||||    
T  9400108 atgtgtgaccaaaataacttaaa 9400130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 235 - 543
Target Start/End: Complemental strand, 41151705 - 41151406
Alignment:
Q  235 gttattttgatcacacacgagtccttt-aagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||| |||||||  |||||||| ||||| | ||||| ||||| ||||||| |||||||| |||||||||||| |||||  |||||||||||||||    
T  41151705 gttattttggtcacacataagtccttttaagttcgtggtttgtaacagattggtcctttaagttcttttggtcacacataagtcctttaagtttgtaaac 41151606  T
Q  334 annnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtg 433  Q
            |||||||| |||| |||||||||| ||||          ||||||||||| ||||| ||||||||| ||||||||| ||||| |||||||||    
T  41151605 -ggtttgaatttagtcattctgccacatcatcgtttt----------ggttaacagaaggactaaattgaaaacatttacaaacataaaggacttatgtg 41151517  T
Q  434 tgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtc 532  Q
    ||||||||||||||||||||| |||| | |||| || |||||| ||||| ||||||| |||||  |||||||||||||  || ||| | |||||||  ||    
T  41151516 tgaccaaaataacttaaaggaccaatctgttactaaactcaaacttaaaggacttatgtgtgatcaaaataacttaaaggaccaatatgttacaaaactc 41151417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 191 - 543
Target Start/End: Original strand, 27127876 - 27128211
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcat 290  Q
    ||||||||| |||||| |||||||| | |||| | |||||||||   ||||||||||||||  |||  |||||||||||| ||| ||||| |||| |  |    
T  27127876 ggtcctttaagtttga-gtttgtaacagattggttatttaagtt---attttgatcacacataagt--tttaagtttgag-tttgtaacagattgattct 27127968  T
Q  291 ttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacaga 390  Q
    |||||||||||||||||||| |||||  ||||||||||||||         ||||||||||||| |||||||||| |||           ||||||||||    
T  27127969 ttaagttattttggtcacacataagtcctttaagtttgtaaat-gttttcaatttagtccttctgccacatcatcgtttg----------ggttaacaga 27128057  T
Q  391 atgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataactt-aaaggatcaatattttacaaacctcaaatttaaatgactta 489  Q
    ||||||| ||||||||| |||||| ||| ||| ||||||||||||||||||||||||| ||| ||||||| | ||| |||||| ||| ||||| |||||     
T  27128058 atgactaaattgaaaacgtttacagactgaaaaaacttatgtgtgaccaaaataacttaaaaagatcaatttgttagaaaccttaaacttaaaggacttg 27128157  T
Q  490 tatgtgactaaaataacttaaaaacaaatttattacaaacgtcaaacttaaagg 543  Q
    | |||||  |||||||| ||||||| ||| |||||||||| |||||||||||||    
T  27128158 tgtgtgatcaaaataacctaaaaaccaatctattacaaacctcaaacttaaagg 27128211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 235 - 512
Target Start/End: Complemental strand, 14550309 - 14550034
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttatttt--ggtcacacgtaagttgtttaagtttgtaaa 332  Q
    ||||||||| ||| |||  |||| |||||||||||||||| |||   ||| ||  ||||| |||||||  |||||||| |||||  ||||||||||||||    
T  14550309 gttattttggtcatacataagtcttttaagtttgaggtttgtaatggattagttctttaaattattttttggtcacacataagtcatttaagtttgtaaa 14550210  T
Q  333 cannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgt 432  Q
    ||       ||||| ||| | |  |||||||||||||||| |||||||||||||||||| || || ||||||||| ||||||||||||||| ||||||||    
T  14550209 catttttt-atttattccgtatgtcacatcatcatttttgcaatgtttggttaacagaaggaataaattgaaaacgtttacaaacttaaaggacttatgt 14550111  T
Q  433 gtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaa 512  Q
    || |||||   ||||| || ||||||||| ||||||||||||||| ||||  |||||| |||||| ||||| ||||||||    
T  14550110 gtaaccaa---aacttcaaagatcaatatgttacaaacctcaaatgtaaagaacttatgtgtgaccaaaattacttaaaa 14550034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 413 - 543
Target Start/End: Complemental strand, 27052540 - 27052409
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaa-a 511  Q
    ||||||||||| |||||||||||||| ||||||||||||||| |||| | |||||||||| ||| |||||||||||||||||||||||||||||||||      
T  27052540 caaacttaaaggacttatgtgtgaccgaaataacttaaaggaccaatgtgttacaaaccttaaacttaaatgacttatatgtgactaaaataacttaagg 27052441  T
Q  512 aacaaatttattacaaacgtcaaacttaaagg 543  Q
     || ||| |||||||||| |||||||||||||    
T  27052440 gaccaatctattacaaacatcaaacttaaagg 27052409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 386 - 543
Target Start/End: Original strand, 6220362 - 6220519
Alignment:
Q  386 acagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatga 485  Q
    |||||| ||||| ||||||||| |||| |||||||||| ||||||||||||||| |||||||||||| | |||| | ||||||| |||||| |||||  |    
T  6220362 acagaaggactaaattgaaaacgttta-aaacttaaaggacttatgtgtgaccacaataacttaaagtaccaatctgttacaaatctcaaacttaaagaa 6220460  T
Q  486 cttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||| |||||| ||||||||||||| ||| ||||| |||||||| |||||||||||||    
T  6220461 cttatgtgtgacaaaaataacttaaagaaccaatttgttacaaacctcaaacttaaagg 6220519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 378 - 543
Target Start/End: Original strand, 24909574 - 24909740
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaat 477  Q
    |||||||||||||| ||||| ||||||   |||||||||||||||| ||||||| ||||||||||||| |||||||| |||| |  |||||||||||||     
T  24909574 tttggttaacagaaggactaaattgaatttttttacaaacttaaaggacttatgcgtgaccaaaataatttaaaggaccaatctgctacaaacctcaaac 24909673  T
Q  478 ttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||| ||||||| |||||  |||||||||||||  || ||||| |||||||  |||||||||||||    
T  24909674 ttaaaggacttatgtgtgatcaaaataacttaaaggaccaatttgttacaaatctcaaacttaaagg 24909740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 390 - 543
Target Start/End: Original strand, 20209442 - 20209596
Alignment:
Q  390 aatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgactta 489  Q
    |||||||| || |||||  ||||||||||||||| |||||| |||||||||||||||||||||||||||| | ||||||||||||||  |||| ||||||    
T  20209442 aatgactatatcgaaaatgtttacaaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacgtaaaagactta 20209541  T
Q  490 tatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    | |||||| ||||||| |||||  || ||| | |||||||| ||||| |||||||    
T  20209542 tgtgtgaccaaaataatttaaaggactaatatgttacaaacctcaaatttaaagg 20209596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 390 - 543
Target Start/End: Original strand, 20229150 - 20229304
Alignment:
Q  390 aatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgactta 489  Q
    |||||||| || |||||  ||||||||||||||| |||||| |||||||||||||||||||||||||||| | ||||||||||||||  |||| ||||||    
T  20229150 aatgactatatcgaaaatgtttacaaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacgtaaaagactta 20229249  T
Q  490 tatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    | |||||| ||||||| |||||  || ||| | |||||||| ||||| |||||||    
T  20229250 tgtgtgaccaaaataatttaaaggactaatatgttacaaacctcaaatttaaagg 20229304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 387 - 543
Target Start/End: Complemental strand, 27128032 - 27127879
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    ||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||| | ||||||| |||||| |||||  ||    
T  27128032 cagaaggactaaattgaaaacatttacaaacttaaaggacttatgtgtgaccaaaataacttaaagaatcaatctgttacaaa-ctcaaacttaaa--ac 27127936  T
Q  487 ttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    |||| |||||  ||||||||||||| ||| ||| | |||||||| |||||||||||||    
T  27127935 ttatgtgtgatcaaaataacttaaataaccaatctgttacaaac-tcaaacttaaagg 27127879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 192 - 543
Target Start/End: Complemental strand, 6220521 - 6220184
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||||| |||||| |||||||| |||||| |  ||||||||   |||||  |||||||  ||| ||||||||||||| ||| ||||| ||||||  ||    
T  6220521 gtcctttaagtttgaggtttgtaacaaattggttctttaagtt---atttttgtcacacataagttctttaagtttgagatttgtaacagattggtactt 6220425  T
Q  292 taagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaa 391  Q
    ||||||||| ||||||||| |||||  ||||||||| |||||        |||||||||||||  ||||||||||||||          |||||| ||||    
T  6220424 taagttattgtggtcacacataagtcctttaagttt-taaac-gttttcaatttagtccttctgtcacatcatcatttt----------ggttaatagaa 6220337  T
Q  392 tgactagattgaaaacttttacaaacttaaaga-acttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttat 490  Q
      |||| ||||||||| ||||||| |||||| | ||||||||||||| ||||| ||||||| || ||||   |||||||||||||| ||||| |||||||    
T  6220336 gtactaaattgaaaacatttacaa-cttaaaaagacttatgtgtgacaaaaattacttaaatgaccaatcagttacaaacctcaaacttaaaggacttat 6220238  T
Q  491 atgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
     ||| || |||||||||||||  || ||||| || ||||| |||||||||||||    
T  6220237 ctgttacaaaaataacttaaaggaccaatttgtttcaaacctcaaacttaaagg 6220184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 409 - 513
Target Start/End: Complemental strand, 15563980 - 15563876
Alignment:
Q  409 tttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataactt 508  Q
    |||| |||||||||| |||||||| ||||||||||||||| ||| || ||||| |||||| ||||||| ||||| ||||||| |||||||||||||||||    
T  15563980 tttagaaacttaaaggacttatgtatgaccaaaataactttaagtattaatatgttacaaccctcaaacttaaaagacttatgtgtgactaaaataactt 15563881  T
Q  509 aaaaa 513  Q
    |||||    
T  15563880 aaaaa 15563876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 190 - 332
Target Start/End: Complemental strand, 24909744 - 24909605
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| ||||||  ||||||| |||||| || ||||||||   ||||||||||||||  ||||||||||||||||||||| || || |||||||     
T  24909744 gggtcctttaagtttgagatttgtaacaaattggtcctttaagtt---attttgatcacacataagtcctttaagtttgaggtttgtagcagattggtcc 24909648  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    ||||| ||||||||||||| | |||||  ||||||||||||||    
T  24909647 tttaaattattttggtcacgcataagtcctttaagtttgtaaa 24909605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 387 - 541
Target Start/End: Original strand, 41151585 - 41151741
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctc-aaatttaaatga 485  Q
    ||||||||||| ||| ||| | ||||||||||||||| |||||||||||||||||| ||||||||||| |||| | ||||||||| | || || ||| ||    
T  41151585 cagaatgactaaattcaaaccgtttacaaacttaaaggacttatgtgtgaccaaaagaacttaaaggaccaatctgttacaaaccacgaacttaaaagga 41151684  T
Q  486 cttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaa 541  Q
    ||||| |||||| |||||||||||||  || ||| | |||||||| |||||||||||    
T  41151685 cttatgtgtgaccaaaataacttaaaggactaatctgttacaaacctcaaacttaaa 41151741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 191 - 404
Target Start/End: Original strand, 24827355 - 24827564
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcat 290  Q
    ||||||||| |||||| |||||||| | |||| |||||||||||   || |||||||||    |||||||||||||||| |||| ||| | ||| |||||    
T  24827355 ggtcctttaagtttgaggtttgtaacagattggtcatttaagtt---atattgatcacaactaagtcctttaagtttgatgtttgtaatagatttgtcat 24827451  T
Q  291 ttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacaga 390  Q
    |||||||||||| ||||||| |||||  ||||| |||||||||        ||||||||||||| | |||||||| |||||||||  ||||||||| |||    
T  24827452 ttaagttattttagtcacacataagtcttttaaatttgtaaac-gttttcgatttagtccttctgcaacatcatcgtttttgtaacatttggttaataga 24827550  T
Q  391 atgactagattgaa 404  Q
    | ||||| ||||||    
T  24827551 aggactaaattgaa 24827564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 191 - 333
Target Start/End: Complemental strand, 27128214 - 27128075
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtc-a 289  Q
    ||||||||| |||||| |||||||||| |||| |  ||| ||  |||||||||||||||||| |||||||||||||| |||||| |||||||||| ||      
T  27128214 ggtcctttaagtttgaggtttgtaatagattggt--ttttag--gttattttgatcacacacaagtcctttaagtttaaggtttctaacaaattgatctt 27128119  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||||||||||||||| |||||| ||| ||| |||||||    
T  27128118 tttaagttattttggtcacacataagttttttcagtctgtaaac 27128075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 367 - 482
Target Start/End: Complemental strand, 24793139 - 24793024
Alignment:
Q  367 tttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttac 466  Q
    ||||| |||||||||||||||| ||||| || |||||||| ||||||||| |||||| |||||||||| |||||||||| |||||||||| || | |||     
T  24793139 tttttttaatgtttggttaacataatgattaaattgaaaatttttacaaatttaaagtacttatgtgtaaccaaaataatttaaaggatctatctattat 24793040  T
Q  467 aaacctcaaatttaaa 482  Q
    ||||| |||| |||||    
T  24793039 aaaccgcaaacttaaa 24793024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 191 - 332
Target Start/End: Original strand, 41151403 - 41151541
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcat 290  Q
    ||||||||| ||||||  ||||||| | |||| || ||||||||   ||||||||||||||  ||||||||||||||||| ||  ||||| ||||||| |    
T  41151403 ggtcctttaagtttgagttttgtaacatattggtcctttaagtt---attttgatcacacataagtcctttaagtttgagtttagtaacagattggtcct 41151499  T
Q  291 ttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    |||||||||||||||||||| |||||  |||| |||||||||    
T  41151500 ttaagttattttggtcacacataagtcctttatgtttgtaaa 41151541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 390 - 543
Target Start/End: Complemental strand, 9399970 - 9399817
Alignment:
Q  390 aatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgactta 489  Q
    |||||||| ||||||||  ||||||| |||||| | |||||||||||||||||||||||||||  ||| | | |||||||||| ||| ||||| ||||||    
T  9399970 aatgactaaattgaaaatgtttacaatcttaaa-agcttatgtgtgaccaaaataacttaaagagtcactctattacaaaccttaaacttaaaggactta 9399872  T
Q  490 tatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
      |||||| ||| ||||||||| ||| ||| | |||||||| |||||||||||||    
T  9399871 cgtgtgaccaaagtaacttaaagaaccaatatgttacaaacctcaaacttaaagg 9399817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 409 - 542
Target Start/End: Original strand, 27052599 - 27052729
Alignment:
Q  409 tttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataactt 508  Q
    ||||||||||||||    |||||||||| ||||||||||||||||| |||| | ||| |||||||||| ||||| ||||||| || ||| ||||||||||    
T  27052599 tttacaaacttaaa----ttatgtgtgatcaaaataacttaaaggaccaatctgttataaacctcaaacttaaaggacttatgtgcgacaaaaataactt 27052694  T
Q  509 aaa-aacaaatttattacaaacgtcaaacttaaag 542  Q
    ||| ||  ||| |||||||||| ||||||||||||    
T  27052695 aaagaatcaatctattacaaacctcaaacttaaag 27052729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 367 - 482
Target Start/End: Original strand, 15564001 - 15564115
Alignment:
Q  367 tttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttac 466  Q
    |||||||||||||| ||||||||||| |||| ||| ||||| || ||||| |||||| |||||||||| || ||||||||||| | ||||||| | ||||    
T  15564001 tttttgtaatgtttagttaacagaataactaaattaaaaacgtt-acaaatttaaaggacttatgtgtaacaaaaataacttagaagatcaatctattac 15564099  T
Q  467 aaacctcaaatttaaa 482  Q
    |||| |||||||||||    
T  15564100 aaacttcaaatttaaa 15564115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 195 - 333
Target Start/End: Complemental strand, 27052729 - 27052598
Alignment:
Q  195 ctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaa 294  Q
    ||||| |||||| |||||||||| ||||||  ||||||||   |||||  || ||||  ||||||||||||||||||||||||||| ||||||| |||||    
T  27052729 ctttaagtttgaggtttgtaatagattgattctttaagtt---atttttgtcgcacataagtcctttaagtttgaggtttataacagattggtcctttaa 27052633  T
Q  295 gttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||| |||||| |||    |||||||||||||||    
T  27052632 gttattttgatcacacataa----tttaagtttgtaaac 27052598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 413 - 482
Target Start/End: Original strand, 9400092 - 9400161
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||| |||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  9400092 caaactcaaagaatttatgtgtgaccaaaataacttaaacgatcaatatgttacaaacctcaaacttaaa 9400161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 378 - 541
Target Start/End: Original strand, 24083206 - 24083365
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaat 477  Q
    |||||||||||||| | ||| ||||||||  ||||||||||||||| |    | ||||| ||||||||||||||  |||||| | ||||||||||||||     
T  24083206 tttggttaacagaagggctaaattgaaaatgtttacaaacttaaagga----tatgtgatcaaaataacttaaaa-atcaatctgttacaaacctcaaac 24083300  T
Q  478 ttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaa 541  Q
    ||||| | ||||| |||||  ||||||||||||| ||| ||| |||||||| | |||||||||||    
T  24083301 ttaaaagccttatgtgtgatcaaaataacttaaataaccaatctattacaaccttcaaacttaaa 24083365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 399 - 542
Target Start/End: Original strand, 28618828 - 28618974
Alignment:
Q  399 attgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgac- 497  Q
    ||||||||| |||||||||||||| || |||| ||||||||||||||||||||||| || | | ||||||| |  ||| ||||  ||||||| ||||||     
T  28618828 attgaaaacgtttacaaacttaaaaaatttatttgtgaccaaaataacttaaaggaccattttattacaaatcgtaaacttaacggacttatgtgtgacg 28618927  T
Q  498 taaaataacttaaaa--acaaatttattacaaacgtcaaacttaaag 542  Q
     ||||||||||||||  ||| |||| ||||||||  |||||||||||    
T  28618928 aaaaataacttaaaatgacatatttgttacaaaccgcaaacttaaag 28618974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 413 - 491
Target Start/End: Original strand, 6220448 - 6220526
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttata 491  Q
    ||||||||||||||||||||||||| |||||||||||||| | |||| | |||||||||||||| ||||| ||| ||||    
T  6220448 caaacttaaagaacttatgtgtgacaaaaataacttaaagaaccaatttgttacaaacctcaaacttaaaggacatata 6220526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 236 - 334
Target Start/End: Complemental strand, 20209557 - 20209459
Alignment:
Q  236 ttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
    |||||||| |||||||  |||| |||| ||||||||||| ||||| |||| || ||||||||||||||||||||  |||||  ||||||||||||||||    
T  20209557 ttattttggtcacacataagtcttttacgtttgaggtttgtaacagattgatcctttaagttattttggtcacaaataagtactttaagtttgtaaaca 20209459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 236 - 334
Target Start/End: Complemental strand, 20229265 - 20229167
Alignment:
Q  236 ttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
    |||||||| |||||||  |||| |||| ||||||||||| ||||| |||| || ||||||||||||||||||||  |||||  ||||||||||||||||    
T  20229265 ttattttggtcacacataagtcttttacgtttgaggtttgtaacagattgatcctttaagttattttggtcacaaataagtactttaagtttgtaaaca 20229167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 387 - 543
Target Start/End: Complemental strand, 24827515 - 24827358
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    ||||| ||||| || |||||| |||||||| |||||  ||||||||||||| ||||||||||||| ||  ||| | |||||||| ||||| ||||| |||    
T  24827515 cagaaggactaaatcgaaaacgtttacaaatttaaaagacttatgtgtgactaaaataacttaaatgacaaatctattacaaacatcaaacttaaaggac 24827416  T
Q  487 ttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    |||  |||||  || ||||||||||  || ||| | |||||||| |||||||||||||    
T  24827415 ttagttgtgatcaatataacttaaatgaccaatctgttacaaacctcaaacttaaagg 24827358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 353 - 429
Target Start/End: Original strand, 22813456 - 22813532
Alignment:
Q  353 ctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaactta 429  Q
    ||||||||||||| |||||||||||||||||||||  ||  |||| ||||||||| ||||||||||||||| |||||    
T  22813456 ctaccacatcatcgtttttgtaatgtttggttaacctaaaaactaaattgaaaacgtttacaaacttaaaggactta 22813532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 328
Target Start/End: Original strand, 27052406 - 27052540
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcat 290  Q
    ||||||||| |||||| |||||||||| |||| ||  |||||||   |||||  ||||| |  |||| ||||||||| |||||| ||||| ||||||| |    
T  27052406 ggtcctttaagtttgatgtttgtaatagattggtcccttaagtt---attttagtcacatataagtcatttaagtttaaggtttgtaacacattggtcct 27052502  T
Q  291 ttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||| |||||||| |||||  ||||||||||    
T  27052503 ttaagttatttcggtcacacataagtcctttaagtttg 27052540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 419 - 476
Target Start/End: Complemental strand, 14550024 - 14549967
Alignment:
Q  419 taaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaa 476  Q
    |||||||||||||||||||||||||||| ||||| | |||||| ||||||||||||||    
T  14550024 taaagaacttatgtgtgaccaaaataacataaagaaccaatatattacaaacctcaaa 14549967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 6220180 - 6220303
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| |||||| ||||| || |||||| || ||||||||   |||||  | ||| |  ||||||||||||||||||||| ||||  ||||||||    
T  6220180 gggtcctttaagtttgaggtttgaaacaaattggtcctttaagtt---atttttgtaacagataagtcctttaagtttgaggtttgtaactgattggtca 6220276  T
Q  290 tttaagttattttggtcacacgtaagt 316  Q
    ||||||| ||||| ||||||| |||||    
T  6220277 tttaagtaatttttgtcacacataagt 6220303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 196 - 333
Target Start/End: Complemental strand, 9400161 - 9400026
Alignment:
Q  196 tttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaag 295  Q
    |||| |||||| |||||||| | ||||||| ||||||||   |||||| |||||||  | | |||| |||||||||||| || ||  |||||| ||||||    
T  9400161 tttaagtttgaggtttgtaacatattgatcgtttaagtt---attttggtcacacataaattctttgagtttgaggtttgtagcatgttggtcctttaag 9400065  T
Q  296 ttattttggtcacacgtaagt-tgtttaagtttgtaaac 333  Q
    ||||||||||||||| |||||   |||||||||||||||    
T  9400064 ttattttggtcacacataagtccttttaagtttgtaaac 9400026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 192 - 310
Target Start/End: Original strand, 16913000 - 16913115
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||||||||||||  ||||||||||| || || ||||||||   |||||||||||| |  | | ||||||||||||||||  ||||| |||||||||     
T  16913000 gtcctttatgtttgagatttgtaataaaatggtcttttaagtt---attttgatcacatataaattctttaagtttgaggttcgtaacagattggtcata 16913096  T
Q  292 taagttattttggtcacac 310  Q
     ||||||||||| ||||||    
T  16913097 aaagttattttgatcacac 16913115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 420 - 483
Target Start/End: Original strand, 41151679 - 41151742
Alignment:
Q  420 aaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaat 483  Q
    |||| ||||||||||||||||||||||||||||||  ||| | |||||||||||||| ||||||    
T  41151679 aaaggacttatgtgtgaccaaaataacttaaaggactaatctgttacaaacctcaaacttaaat 41151742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 36053126 - 36053048
Alignment:
Q  254 agtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    |||| ||||| |||||||||| ||| | |||| || ||||||||||||| ||||||| |||||| ||||||||||||||    
T  36053126 agtcatttaaatttgaggtttgtaaaatattgatcctttaagttattttagtcacacataagttctttaagtttgtaaa 36053048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 6220182 - 6220255
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||||| || |||  |||||  ||||||||||    
T  6220182 gtcctttaagtttgaggtttgaaacaaattggtcctttaagttatttttgtaacagataagtcctttaagtttg 6220255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 409 - 511
Target Start/End: Original strand, 14550210 - 14550314
Alignment:
Q  409 tttacaaacttaaagaacttatgtgtgaccaaaa--taacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataac 506  Q
    ||||||||||||||  ||||||||||||||||||  ||| |||||| |  |||   |||||||||||||| ||||| ||||||| | |||| ||||||||    
T  14550210 tttacaaacttaaatgacttatgtgtgaccaaaaaataatttaaagaactaatccattacaaacctcaaacttaaaagacttatgtatgaccaaaataac 14550309  T
Q  507 ttaaa 511  Q
    |||||    
T  14550310 ttaaa 14550314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 413 - 482
Target Start/End: Complemental strand, 38414665 - 38414597
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||||||| || |||||||||| |||||||| ||||| ||| ||||| ||||||||||||||||||||    
T  38414665 caaacttaaa-aatttatgtgtgatcaaaataaattaaatgataaatatgttacaaacctcaaatttaaa 38414597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 259 - 316
Target Start/End: Complemental strand, 41151741 - 41151684
Alignment:
Q  259 tttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagt 316  Q
    |||||||||||||||| ||||| ||| ||| ||||||||||||||||||||| |||||    
T  41151741 tttaagtttgaggtttgtaacagattagtcctttaagttattttggtcacacataagt 41151684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 387 - 542
Target Start/End: Complemental strand, 27855715 - 27855559
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    ||||| ||||| || |||||| |||| |||||||||  | |||| ||| ||||||| ||||||| ||| |||| |  |||||||||| || ||||||||     
T  27855715 cagaaggactaaatcgaaaacatttaaaaacttaaatgatttatatgtaaccaaaacaacttaagggaccaatctgctacaaacctcgaacttaaatgat 27855616  T
Q  487 ttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaag 542  Q
    |||| ||||   |||||||||||||  || ||| |||||||||| | ||||||||||    
T  27855615 ttatgtgtgttcaaaataacttaaaggaccaatctattacaaaccttaaacttaaag 27855559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 409 - 543
Target Start/End: Complemental strand, 36052971 - 36052833
Alignment:
Q  409 tttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaat---aa 505  Q
    |||||||||||||| |||||| |||||||||||||||| |||| ||||||| | ||  |||| ||||| ||||| ||||  | |||||  |||||   ||    
T  36052971 tttacaaacttaaacaacttacgtgtgaccaaaataacataaatgatcaatctgttgtaaacttcaaacttaaaggactcgtgtgtgatcaaaataacaa 36052872  T
Q  506 cttaaaa-acaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||||| |  |||||||||||||| |||||| ||||||    
T  36052871 cttaaaagatcaatttattacaaacttcaaacataaagg 36052833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 385 - 496
Target Start/End: Original strand, 14895121 - 14895230
Alignment:
Q  385 aacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatg 484  Q
    |||| |||||||| ||||||||| ||||||||||||||| | |||| |||  |||| |||||||| | || |||| | ||||||| |||||| ||||| |    
T  14895121 aacaaaatgactaaattgaaaacgtttacaaacttaaaggatttatatgtagccaatataacttaga-gaccaatttattacaaaactcaaacttaaa-g 14895218  T
Q  485 acttatatgtga 496  Q
    ||||||||||||    
T  14895219 acttatatgtga 14895230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 196 - 309
Target Start/End: Complemental strand, 24083365 - 24083256
Alignment:
Q  196 tttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaag 295  Q
    |||| |||||||| |||||||| |||| | |||||||||   ||||||||||||||  || | |||||||||||||||| ||||| |||| |  ||||||    
T  24083365 tttaagtttgaaggttgtaatagattggttatttaagtt---attttgatcacacataaggcttttaagtttgaggtttgtaacagattgat-ttttaag 24083270  T
Q  296 ttattttggtcaca 309  Q
    |||||||| |||||    
T  24083269 ttattttgatcaca 24083256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 440
Target Start/End: Original strand, 27855554 - 27855799
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||| ||||| |||| | |||||||||| |||| || ||||||||   ||||||| ||||||  | || |||||||| ||||||| || || |||||||     
T  27855554 gggttctttaagtttaaggtttgtaatagattggtcctttaagtt---attttgaacacacataaatcatttaagttcgaggtttgtagcagattggtcc 27855650  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacag 389  Q
     ||||||| ||||||| |||  ||| |  ||||||||| ||||         ||||||||||||| |||||||||| ||||| |||||| || |||| ||    
T  27855651 cttaagttgttttggttacatataaatcatttaagtttttaaat-gttttcgatttagtccttctgccacatcatcgttttt-taatgtctgattaatag 27855748  T
Q  390 aatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaa 440  Q
    ||  | || ||||||||| |||||||||| |||  || |||||||||||||    
T  27855749 aagaattaaattgaaaacgtttacaaactcaaatgacatatgtgtgaccaa 27855799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 267 - 330
Target Start/End: Complemental strand, 29428021 - 29427958
Alignment:
Q  267 tgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgta 330  Q
    |||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||||||||||||    
T  29428021 tgaggtttctaacagattggtcttttaagttattttggtcatacataagtcctttaagtttgta 29427958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 411 - 474
Target Start/End: Original strand, 29427958 - 29428021
Alignment:
Q  411 tacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctca 474  Q
    ||||||||||||| |||||||| |||||||||||||||||| || |||| | ||| ||||||||    
T  29427958 tacaaacttaaaggacttatgtatgaccaaaataacttaaaagaccaatctgttagaaacctca 29428021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 360 - 486
Target Start/End: Complemental strand, 9090093 - 9089967
Alignment:
Q  360 atcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaat 459  Q
    |||| ||||||||||||||| | |||| ||||  | || ||||||  | |||| |||||||||||| ||||||||| | ||||||| |||||||| | |     
T  9090093 atcagcatttttgtaatgttggattaatagaagtattaaattgaatccgtttataaacttaaagaatttatgtgtggcaaaaataatttaaaggacctac 9089994  T
Q  460 attttacaaacctcaaatttaaatgac 486  Q
     | | |||||||||||| |||||||||    
T  9089993 ctatcacaaacctcaaacttaaatgac 9089967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 429 - 574
Target Start/End: Complemental strand, 16913117 - 16912971
Alignment:
Q  429 atgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaa-acaaatttattacaa 527  Q
    |||||||| |||||||||||  | || |||| | |||| ||||||||| |||||  | ||||||||||  |||||||||||||| || | ||||||||||    
T  16913117 atgtgtgatcaaaataacttttatgaccaatctgttacgaacctcaaacttaaagaatttatatgtgatcaaaataacttaaaagaccattttattacaa 16913018  T
Q  528 acgtcaaacttaaaggttattcggtgtaacttagcctaaaaaataat 574  Q
    |  |||||| ||||||     |||||||| |||||||| ||||||||    
T  16913017 atctcaaacataaaggactcccggtgtaatttagcctataaaataat 16912971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 416 - 450
Target Start/End: Complemental strand, 20209333 - 20209299
Alignment:
Q  416 acttaaagaacttatgtgtgaccaaaataacttaa 450  Q
    |||||||||||||||||||||||||||||||||||    
T  20209333 acttaaagaacttatgtgtgaccaaaataacttaa 20209299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 250 - 316
Target Start/End: Complemental strand, 20209603 - 20209537
Alignment:
Q  250 cacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagt 316  Q
    |||| ||||||||| |||||||||| ||||| ||| ||| ||||| ||||||||||||||| |||||    
T  20209603 cacgtgtcctttaaatttgaggtttgtaacatattagtcctttaaattattttggtcacacataagt 20209537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 416 - 450
Target Start/End: Complemental strand, 20229041 - 20229007
Alignment:
Q  416 acttaaagaacttatgtgtgaccaaaataacttaa 450  Q
    |||||||||||||||||||||||||||||||||||    
T  20229041 acttaaagaacttatgtgtgaccaaaataacttaa 20229007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 250 - 316
Target Start/End: Complemental strand, 20229311 - 20229245
Alignment:
Q  250 cacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagt 316  Q
    |||| ||||||||| |||||||||| ||||| ||| ||| ||||| ||||||||||||||| |||||    
T  20229311 cacgtgtcctttaaatttgaggtttgtaacatattagtcctttaaattattttggtcacacataagt 20229245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 454
Target Start/End: Complemental strand, 29386281 - 29386183
Alignment:
Q  360 atcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaact----tatgtgtgaccaaaataacttaaagga 454  Q
    |||||| ||||||||| |||||||||||| |||||||| ||||||| | | |  |||||||||  |||    ||||||||||||||||||| |||||||    
T  29386281 atcatcgtttttgtaacgtttggttaacaaaatgactaaattgaaaccatcttaaaacttaaatgacttatatatgtgtgaccaaaataacataaagga 29386183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 256 - 325
Target Start/End: Original strand, 20209268 - 20209333
Alignment:
Q  256 tcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagt 325  Q
    ||||||||||||| ||||| ||||||||| ||    ||||||||||||||||||| |||||| |||||||    
T  20209268 tcctttaagtttgtggtttgtaacaaattagt----taagttattttggtcacacataagttctttaagt 20209333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 376 - 452
Target Start/End: Complemental strand, 20209429 - 20209353
Alignment:
Q  376 tgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaag 452  Q
    |||||||||||   || ||||| || |||||  ||||||||||||||| | |||| |||||||||||||||||||||    
T  20209429 tgtttggttaaagaaaggactaaatagaaaatgtttacaaacttaaagtatttatttgtgaccaaaataacttaaag 20209353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 256 - 325
Target Start/End: Original strand, 20228976 - 20229041
Alignment:
Q  256 tcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagt 325  Q
    ||||||||||||| ||||| ||||||||| ||    ||||||||||||||||||| |||||| |||||||    
T  20228976 tcctttaagtttgtggtttgtaacaaattagt----taagttattttggtcacacataagttctttaagt 20229041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 376 - 452
Target Start/End: Complemental strand, 20229137 - 20229061
Alignment:
Q  376 tgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaag 452  Q
    |||||||||||   || ||||| || |||||  ||||||||||||||| | |||| |||||||||||||||||||||    
T  20229137 tgtttggttaaagaaaggactaaatagaaaatgtttacaaacttaaagtatttatttgtgaccaaaataacttaaag 20229061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 245 - 333
Target Start/End: Complemental strand, 28618925 - 28618837
Alignment:
Q  245 tcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    |||||||  ||||| ||||||||  | ||| ||| ||| ||||| ||||||||||||||||||||  ||| || |||||||||||||||    
T  28618925 tcacacataagtccgttaagtttacgatttgtaataaaatggtcctttaagttattttggtcacaaataaattttttaagtttgtaaac 28618837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 322
Target Start/End: Original strand, 14549957 - 14550024
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgttta 322  Q
    ||||| |||||||||||||| ||| | ||||||  |||| |||||||||||||||| |||||| ||||    
T  14549957 gtcctctaagtttgaggtttgtaatatattggttctttatgttattttggtcacacataagttcttta 14550024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 16912998 - 16913073
Alignment:
Q  253 gagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||||||| ||||||| ||| ||| ||| ||||| |||||||||||||| |||||  ||| || ||||||||||    
T  16912998 gagtcctttatgtttgagatttgtaataaaatggtcttttaagttattttgatcacatataaattctttaagtttg 16913073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 38415026 - 38414956
Alignment:
Q  383 ttaacagaatgactagattgaaaacttttacaaacttaaagaactt-atgtgtgaccaaaataacttaaag 452  Q
    |||| ||||| |||| ||||||||| |||||||| |||||| | || || |||||||||||||||||||||    
T  38415026 ttaatagaataactaaattgaaaacatttacaaatttaaaggattttatatgtgaccaaaataacttaaag 38414956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 413 - 454
Target Start/End: Original strand, 14550276 - 14550317
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaagga 454  Q
    ||||||||||  |||||||| |||||||||||||||||||||    
T  14550276 caaacttaaaagacttatgtatgaccaaaataacttaaagga 14550317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 24083122 - 24083179
Alignment:
Q  259 tttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagt 316  Q
    ||||||| |||||||| ||||| |||||||||||| ||||||||| ||| ||| ||||    
T  24083122 tttaagtatgaggtttttaacagattggtcatttacgttattttgatcatacgcaagt 24083179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 161; Significance: 2e-85; HSPs: 120)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 193 - 543
Target Start/End: Original strand, 25848287 - 25848634
Alignment:
Q  193 tcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcattt 292  Q
    ||||||| ||||||  ||||||||||||||||| ||||||||   |||||| |||||||| ||||||||||||||||||||| ||| | ||| |||  ||    
T  25848287 tcctttaagtttgagatttgtaataaattgatcctttaagtt---attttggtcacacacaagtcctttaagtttgaggtttgtaatagattagtccgtt 25848383  T
Q  293 aagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaat 392  Q
    ||||||||||||||||||  || |  |||||||||||||||        ||||||||||||| |||||| |||||||||||||||||||||||||||||     
T  25848384 aagttattttggtcacacaaaaatcttttaagtttgtaaac-gtttgcgatttagtccttctgccacataatcatttttgtaatgtttggttaacagaag 25848482  T
Q  393 gactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatat 492  Q
    ||||| ||||||||| ||||||||||||||| || ||||||||||||||||||||||||||| |||| | |||||||||| ||||||||| ||||||| |    
T  25848483 gactaaattgaaaacatttacaaacttaaaggacatatgtgtgaccaaaataacttaaaggaccaatgtgttacaaacctaaaatttaaaggacttatgt 25848582  T
Q  493 gtgactaaaataacttaaaa-acaaatttattacaaacgtcaaacttaaagg 543  Q
    |||| ||||||||||||||| |  |||||||||||||| |||||||| ||||    
T  25848583 gtgattaaaataacttaaaagatcaatttattacaaacctcaaactttaagg 25848634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 190 - 504
Target Start/End: Original strand, 32186459 - 32186769
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| |||||| |||||||||| |||| || |||||| |   |||||| ||||||   |||| |||||||||||||||||||||  || | |||    
T  32186459 gggtcctttaagtttgaggtttgtaatatattggtcctttaagct---attttggtcacacctaagtcttttaagtttgaggtttataactgatcgatca 32186555  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacag 389  Q
    ||||||||||||| || |||| |||||  ||||||||| |||||        |||||||||||||||||||||||||||||||| | ||||||||||||     
T  32186556 tttaagttatttttgtaacacataagtcctttaagtttttaaac-gttttcgatttagtccttctaccacatcatcatttttgttacgtttggttaacaa 32186654  T
Q  390 aatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgactta 489  Q
    || ||||| ||||||||| ||||||||||||||||| |||||||| ||||||||||||||||  |||||||| |||||||||||||| ||||| ||||||    
T  32186655 aaagactaaattgaaaacgtttacaaacttaaagaatttatgtgtaaccaaaataacttaaaacatcaatatgttacaaacctcaaacttaaaggactta 32186754  T
Q  490 tatgtgactaaaata 504  Q
    | |||||| ||||||    
T  32186755 tgtgtgaccaaaata 32186769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 235 - 511
Target Start/End: Original strand, 40286277 - 40286550
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| |||| || |||||||||||||||||||||  ||||  |||||||||||||| |    
T  40286277 gttattttgatcacacataagtcctttaagtttgaggtttataacatattgttcctttaagttattttggtcacacagaagtcctttaagtttgtaaata 40286376  T
Q  335 nnnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgt 434  Q
           ||||||| |||||  ||||||||| |||||||||||||||||||| ||||  |||| ||||||||  |||||||||||||||||||||  |||    
T  40286377 ttttcg-atttagtacttctgtcacatcatcgtttttgtaatgtttggttaatagaagaactaaattgaaaatgtttacaaacttaaagaactta--tgt 40286473  T
Q  435 gaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa 511  Q
    ||| ||||||||| ||| || |||| | |||||||||||||| ||||| ||||||| || ||  |||||||||||||    
T  40286474 gactaaaataactcaaaagaccaatctgttacaaacctcaaacttaaaggacttatgtgcgataaaaataacttaaa 40286550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 236 - 543
Target Start/End: Original strand, 47891149 - 47891456
Alignment:
Q  236 ttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacan 335  Q
    |||||||| ||||||   |||| |||||||||||||||| || || |||| || ||||||||||||||||| ||  | |||  ||||||||||||||       
T  47891149 ttattttggtcacacctaagtcatttaagtttgaggtttgtaccagattgatcctttaagttattttggtcgcatattagtcttttaagtttgtaaat-g 47891247  T
Q  336 nnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtg 435  Q
          |||||||| || |  ||||||||| ||||||||| |||||||||||| || ||||| ||||||||| ||||||||||||||  |||||||||||    
T  47891248 ttttcgatttagtcattttgtcacatcatcgtttttgtaacgtttggttaacataaggactaaattgaaaacgtttacaaacttaaaagacttatgtgtg 47891347  T
Q  436 accaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaa 534  Q
    ||||||||||||||||||| |||||| || ||||||||||| | ||| ||||||| |||||  |||||||||||||  |  ||||| |||||||  ||||    
T  47891348 accaaaataacttaaaggaccaatatgttgcaaacctcaaactcaaaggacttatgtgtgatcaaaataacttaaaggatcaatttgttacaaatttcaa 47891447  T
Q  535 acttaaagg 543  Q
    |||||||||    
T  47891448 acttaaagg 47891456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 209 - 454
Target Start/End: Original strand, 43650000 - 43650242
Alignment:
Q  209 tttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcac 308  Q
    |||||||||||||| || ||||||||   |||||  |||||||  | |||||||||||||||| || ||| | |||||||||||||||||||||| ||||    
T  43650000 tttgtaataaattggtcttttaagtt---attttcgtcacacataaatcctttaagtttgaggattgtaagagattggtcatttaagttattttgatcac 43650096  T
Q  309 acgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaact 408  Q
    || ||| |  ||||||||||||||||       |||||||| |||| |||||||||| |||||||||||||| |||||||||| |||||  |||||||      
T  43650097 acataaatcttttaagtttgtaaacattttcg-atttagtctttctgccacatcatcgtttttgtaatgttttgttaacagaaggactaagttgaaaaga 43650195  T
Q  409 tttacaaa-cttaaagaacttatgtgtgaccaaaataacttaaagga 454  Q
    |||||||| ||||||| |||||||||| |||||||||||||||||||    
T  43650196 tttacaaatcttaaaggacttatgtgttaccaaaataacttaaagga 43650242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 357 - 539
Target Start/End: Complemental strand, 28814025 - 28813843
Alignment:
Q  357 cacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatc 456  Q
    |||| |||| ||||||||| |||||||||||| ||  |||| ||||||||| ||||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  28814025 cacaccatcgtttttgtaacgtttggttaacataaatactaaattgaaaacgtttacaaacttgaaggacttatgtgtgaccaaaataacttaaatgatc 28813926  T
Q  457 aatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaaacaaatttattacaaacgtcaaactta 539  Q
    ||| | ||||||| |||||| |||||  |||||||||||||  |||||||||||| |  ||| |||||||||| |||||||||    
T  28813925 aatttattacaaatctcaaacttaaagaacttatatgtgacctaaataacttaaagatcaatctattacaaacctcaaactta 28813843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 342 - 509
Target Start/End: Complemental strand, 5442659 - 5442491
Alignment:
Q  342 atttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaaga-acttatgtgtgaccaa 440  Q
    |||||||||||||  ||||||||| ||||||||||||| |||||||| ||  |||| ||||||||| |||||||| || || | |||||| |||||||||    
T  5442659 atttagtccttctgtcacatcatcgtttttgtaatgttgggttaacataagaactaaattgaaaacatttacaaattttaaaagacttatctgtgaccaa 5442560  T
Q  441 aataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataactta 509  Q
    ||||||||||||||  |||  ||||||||||||||| ||||| || ||||||||||| |||||||||||    
T  5442559 aataacttaaaggacgaatcatttacaaacctcaaacttaaaggagttatatgtgaccaaaataactta 5442491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 190 - 482
Target Start/End: Original strand, 47069525 - 47069803
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    ||||||||||  ||||| |||||||| | |||| || ||||||||   ||||||||||||||  ||| ||||||||||||| ||| ||||||||||||      
T  47069525 gggtcctttaaatttgaggtttgtaacatattggtcctttaagtt---attttgatcacacataagttctttaagtttgagttttgtaacaaattggttc 47069621  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacag 389  Q
    ||| ||||||||||||||||| |||||  ||| |||| ||||||        ||||||| |||||||||||||||| ||||          ||||||||     
T  47069622 ttttagttattttggtcacacataagtcctttgagttcgtaaac-gttttcaatttagttcttctaccacatcatcgtttt----------ggttaacat 47069710  T
Q  390 aatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||||| ||||||||| ||||||||||||||| |||||| |||||| ||| | ||||||| || |||| | |||||||||||||| |||||    
T  47069711 aatgactaaattgaaaacgtttacaaacttaaaggacttatatgtgacgaaattcacttaaatgaccaatctgttacaaacctcaaacttaaa 47069803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 190 - 333
Target Start/End: Complemental strand, 47891460 - 47891320
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| ||||||| ||||||| ||||||||| ||||||||   ||||||||||||||  |||||||| ||||||||||||  |||| |||||||     
T  47891460 gggtcctttaagtttgaaatttgtaacaaattgatcctttaagtt---attttgatcacacataagtcctttgagtttgaggtttgcaacatattggtcc 47891364  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||||||||||||||| |||||  |||||||||||||||    
T  47891363 tttaagttattttggtcacacataagtcttttaagtttgtaaac 47891320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 367 - 511
Target Start/End: Original strand, 36900033 - 36900177
Alignment:
Q  367 tttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttac 466  Q
    ||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||| | ||||||| ||  ||||||||||||| ||||||| | ||||    
T  36900033 tttttgtaatgtttggttaacagaatgactaaattgaaaatgtttacaaacttaaaggatttatgtgagattaaaataacttaaacgatcaatctcttac 36900132  T
Q  467 aaacctcaaatttaaatgacttatatgtgactaaaataacttaaa 511  Q
    |||||| ||| ||||| ||| ||| ||| || |||||||||||||    
T  36900133 aaaccttaaacttaaaggacctatgtgtaaccaaaataacttaaa 36900177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 378 - 514
Target Start/End: Complemental strand, 40209841 - 40209707
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaat 477  Q
    ||||||||||||||| |||| ||||||||| |||||||||||||||| ||||||||||| ||||| |||||||| ||||||| | ||| |||||||||||    
T  40209841 tttggttaacagaataactaaattgaaaacgtttacaaacttaaaga-cttatgtgtgaacaaaacaacttaaaagatcaatctattagaaacctcaaat 40209743  T
Q  478 ttaaatgacttatatgtgactaaaataacttaaaaac 514  Q
    |||||| |||||| |||||  ||||||||||||||||    
T  40209742 ttaaat-acttatgtgtgatcaaaataacttaaaaac 40209707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 357 - 511
Target Start/End: Complemental strand, 27768494 - 27768340
Alignment:
Q  357 cacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatc 456  Q
    ||||||||||||||||||| |||||||||||||| |||||| ||| ||||| ||||||||||||||| | |||||||||| ||||||||| |||| |||     
T  27768494 cacatcatcatttttgtaacgtttggttaacagattgactaaatttaaaacgtttacaaacttaaaggatttatgtgtgatcaaaataacataaatgatt 27768395  T
Q  457 aatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa 511  Q
    ||| |||||||||| ||| | ||||| || |||| ||| |  |||||||||||||    
T  27768394 aatcttttacaaacatcatacttaaaagatttatgtgtaatcaaaataacttaaa 27768340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 254 - 543
Target Start/End: Complemental strand, 47573974 - 47573696
Alignment:
Q  254 agtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttc 353  Q
    |||| |||||||||||||||| ||| | |||| || ||||||||||||||||||||  |||||  |||||||| ||||||        ||||| ||||||    
T  47573974 agtcttttaagtttgaggtttgtaatagattgatcctttaagttattttggtcacatataagtc-tttaagttcgtaaac-gttttcaatttaatccttc 47573877  T
Q  354 taccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaagg 453  Q
    | |||||||||||||||          |||||| |||| ||||| |||||||  |||||||||||||||  ||||||| | | ||||||||| |||||||    
T  47573876 tgccacatcatcatttt----------ggttaatagaaggactaaattgaaattttttacaaacttaaatgacttatgagcggccaaaataatttaaagg 47573787  T
Q  454 atcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    |||||||| |||||||||||||| ||||| ||||||| |||||  ||||||| |||||  || ||| | |||||||| |||||||||||||    
T  47573786 atcaatatgttacaaacctcaaacttaaaagacttatgtgtgataaaaataatttaaaggactaatatgttacaaacctcaaacttaaagg 47573696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 386 - 543
Target Start/End: Original strand, 50332612 - 50332769
Alignment:
Q  386 acagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatga 485  Q
    ||||||||| || |||||||||||||||||| |||||||  ||||||||| | ||||||||||| ||||| ||| | | |||||||||||| ||||| ||    
T  50332612 acagaatgattaaattgaaaacttttacaaagttaaagat-ttatgtgtggcaaaaataacttagaggattaatttgtaacaaacctcaaacttaaagga 50332710  T
Q  486 cttatatgtgactaaaataacttaaaa-acaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||| ||| || |||||||||||||| |  |||||||||||||| |||||||||||||    
T  50332711 cttatgtgtaaccaaaataacttaaaagatcaatttattacaaacatcaaacttaaagg 50332769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 190 - 333
Target Start/End: Complemental strand, 18020162 - 18020022
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| |||||| |||||||||| |||||| |||||||||   |||||| ||| |||  |||||||||||||| |||||||||||| |||||||     
T  18020162 gggtcctttaagtttgaggtttgtaatagattgattatttaagtt---attttggtcaaacataagtcctttaagtttaaggtttataacagattggtcg 18020066  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    |||||||||||||||| |||| |||||  |||||||||| ||||    
T  18020065 tttaagttattttggttacacataagtcttttaagtttgcaaac 18020022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 378 - 543
Target Start/End: Original strand, 18019992 - 18020158
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaat 477  Q
    ||||||||||| || ||||| ||||||||  ||| ||||||||||  |||||||||| |||||||||||||||| || |||| | ||| |||||| |||     
T  18019992 tttggttaacataaggactaaattgaaaaggtttgcaaacttaaaagacttatgtgtaaccaaaataacttaaacgaccaatctgttataaaccttaaac 18020091  T
Q  478 ttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||| ||||||| | |||| ||||||||||||| ||  ||| |||||||||| |||||||||||||    
T  18020092 ttaaaggacttatgtttgaccaaaataacttaaataatcaatctattacaaacctcaaacttaaagg 18020158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 192 - 332
Target Start/End: Complemental strand, 25848636 - 25848499
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||| | |||||| |||||||||||||||||| ||||||||   ||||| ||||||||  |||||||||| ||| |||||| ||||| ||||||| ||    
T  25848636 gtccttaaagtttgaggtttgtaataaattgatcttttaagtt---attttaatcacacataagtcctttaaattttaggtttgtaacacattggtcctt 25848540  T
Q  292 taagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    ||||||||||||||||||| || ||  ||||||||||||||    
T  25848539 taagttattttggtcacacatatgtcctttaagtttgtaaa 25848499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 409 - 538
Target Start/End: Complemental strand, 40286374 - 40286244
Alignment:
Q  409 tttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataactt 508  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||| |||||| ||| |||||||||| ||||| ||||||| |||||  ||||||||||    
T  40286374 tttacaaacttaaaggacttctgtgtgaccaaaataacttaaaggaacaatatgttataaacctcaaacttaaaggacttatgtgtgatcaaaataactt 40286275  T
Q  509 -aaaaacaaatttattacaaacgtcaaactt 538  Q
     ||  || ||||| |||||||| ||||||||    
T  40286274 gaaggactaatttgttacaaacatcaaactt 40286244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 378 - 543
Target Start/End: Original strand, 26724181 - 26724346
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaa-gaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaa 476  Q
    ||||||||||| || ||||| ||||||||| |||| ||||||||| |||||| ||| ||||||||||||||||||  |  ||| | ||| | ||||||||    
T  26724181 tttggttaacaaaaggactaaattgaaaacgtttataaacttaaaagaacttgtgtatgaccaaaataacttaaa--actaatctgttagagacctcaaa 26724278  T
Q  477 tttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    |||||| ||||||| |||||| ||||||||||||| ||  ||| |||||||||| |||||||||||||    
T  26724279 tttaaaggacttatgtgtgacgaaaataacttaaagaatcaatctattacaaacctcaaacttaaagg 26724346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 402 - 541
Target Start/End: Complemental strand, 46337645 - 46337505
Alignment:
Q  402 gaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaa 501  Q
    ||||| |||||||||||||||| | |||| ||||||||||||||||||||| || ||||| |||||||| ||||| ||||| ||||||| |||||| |||    
T  46337645 gaaaatttttacaaacttaaaggatttatctgtgaccaaaataacttaaagaattaatatgttacaaacttcaaacttaaaggacttatgtgtgaccaaa 46337546  T
Q  502 ataacttaaa-aacaaatttattacaaacgtcaaacttaaa 541  Q
    |||| ||||| ||  ||| | |||||||| |||||||||||    
T  46337545 ataatttaaagaatcaatatgttacaaacctcaaacttaaa 46337505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 390 - 512
Target Start/End: Complemental strand, 47891264 - 47891142
Alignment:
Q  390 aatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgactta 489  Q
    |||||||| || |||||| ||||||||||||||  ||| || || ||||||||||||||||||||||||| |  ||||||||||||| ||||||||||||    
T  47891264 aatgactaaatcgaaaacatttacaaacttaaaagactaatatgcgaccaaaataacttaaaggatcaatctggtacaaacctcaaacttaaatgactta 47891165  T
Q  490 tatgtgactaaaataacttaaaa 512  Q
      |||||| ||||||| ||||||    
T  47891164 ggtgtgaccaaaataatttaaaa 47891142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 402 - 543
Target Start/End: Original strand, 7607680 - 7607820
Alignment:
Q  402 gaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaa 501  Q
    |||||| |||| |||||||||  ||||||| |||||||||||||||||||  |||||||| |||||||| ||||| |||||||||||||||  ||| |||    
T  7607680 gaaaacgtttagaaacttaaaagacttatgcgtgaccaaaataacttaaaa-atcaatatgttacaaacatcaaacttaaatgacttatataagacgaaa 7607778  T
Q  502 ataacttaaaaacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||||||||||   |  ||||| |||| |||||||||||||    
T  7607779 ataacttaaaaaaccaactattataaacttcaaacttaaagg 7607820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 420 - 540
Target Start/End: Original strand, 30954957 - 30955078
Alignment:
Q  420 aaagaacttatgtgtgaccaaaataacttaaa-ggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaaacaaat 518  Q
    |||| ||||||||||||||||||||||||||| ||| |||| | ||||||| ||||||  |||| ||||||| |||||| ||||||||||||| || |||    
T  30954957 aaaggacttatgtgtgaccaaaataacttaaaaggaccaatctcttacaaatctcaaacataaaggacttatgtgtgaccaaaataacttaaacactaat 30955056  T
Q  519 ttattacaaacgtcaaacttaa 540  Q
     |||||||||| ||||||||||    
T  30955057 ctattacaaacctcaaacttaa 30955078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 420 - 540
Target Start/End: Original strand, 30970769 - 30970890
Alignment:
Q  420 aaagaacttatgtgtgaccaaaataacttaaa-ggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaaacaaat 518  Q
    |||| ||||||||||||||||||||||||||| ||| |||| | ||||||| ||||||  |||| ||||||| |||||| ||||||||||||| || |||    
T  30970769 aaaggacttatgtgtgaccaaaataacttaaaaggaccaatctcttacaaatctcaaacataaaggacttatgtgtgaccaaaataacttaaacactaat 30970868  T
Q  519 ttattacaaacgtcaaacttaa 540  Q
     |||||||||| ||||||||||    
T  30970869 ctattacaaacctcaaacttaa 30970890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 413 - 482
Target Start/End: Complemental strand, 47069600 - 47069531
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||    
T  47069600 caaacttaaagaacttatgtgtgatcaaaataacttaaaggaccaatatgttacaaacctcaaatttaaa 47069531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 357 - 482
Target Start/End: Original strand, 51833356 - 51833481
Alignment:
Q  357 cacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatc 456  Q
    ||||||||||||||||||| |||||||||||||||  |||| ||||| ||| ||||||| ||||||  |||||||| |||||||||||||| | | ||||    
T  51833356 cacatcatcatttttgtaacgtttggttaacagaagaactaaattgataacatttacaatcttaaatgacttatgtatgaccaaaataactaacatgatc 51833455  T
Q  457 aatattttacaaacctcaaatttaaa 482  Q
    ||| | |||||||| ||||| |||||    
T  51833456 aatctattacaaacttcaaacttaaa 51833481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 418 - 543
Target Start/End: Original strand, 25848568 - 25848695
Alignment:
Q  418 ttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaa--aca 515  Q
    |||||| ||||||||||||  ||||||||||||| ||||||| | |||||||||||||| || || ||||||| ||| || ||||||||||||||  ||     
T  25848568 ttaaaggacttatgtgtgattaaaataacttaaaagatcaatttattacaaacctcaaactttaaggacttatgtgttaccaaaataacttaaaaggacc 25848667  T
Q  516 aatttattacaaacgtcaaacttaaagg 543  Q
    ||||||||| |||| |||||||||||||    
T  25848668 aatttattataaacctcaaacttaaagg 25848695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 387 - 538
Target Start/End: Complemental strand, 43650142 - 43649990
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    ||||| ||||| || |||||  ||||||||||||||  | |||||||||| |||||||||||||| || |||| | |||||| ||||||| ||||| ||     
T  43650142 cagaaagactaaatcgaaaatgtttacaaacttaaaagatttatgtgtgatcaaaataacttaaatgaccaatctcttacaatcctcaaacttaaaggat 43650043  T
Q  487 ttatatgtgactaaaataacttaaaa-acaaatttattacaaacgtcaaactt 538  Q
    |||| |||||| |||||||||||||| || |||||||||||||  ||||||||    
T  43650042 ttatgtgtgacgaaaataacttaaaagaccaatttattacaaatctcaaactt 43649990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 399 - 490
Target Start/End: Original strand, 47573887 - 47573977
Alignment:
Q  399 attgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttat 490  Q
    ||||||||| ||||| |||||||||| ||||| |||||||||||||||||||||||||||| | |||||||||||||| ||||| |||||||    
T  47573887 attgaaaacgtttacgaacttaaaga-cttatatgtgaccaaaataacttaaaggatcaatctattacaaacctcaaacttaaaagacttat 47573977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 402 - 542
Target Start/End: Complemental strand, 252189 - 252048
Alignment:
Q  402 gaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaa 501  Q
    |||||| ||||||||||||||| |||||| |||||||||||||||||||| ||   || | |||||||||| ||| ||||| ||||||  |||||| |||    
T  252189 gaaaacgtttacaaacttaaaggacttatttgtgaccaaaataacttaaaagactgatctgttacaaaccttaaacttaaaggacttacgtgtgaccaaa 252090  T
Q  502 ataacttaaa-aacaaatttattacaaacgtcaaacttaaag 542  Q
    ||||||||||  || ||| ||||| |||| ||||||||||||    
T  252089 ataacttaaatgaccaatctattataaacctcaaacttaaag 252048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 252048 - 252117
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagttt 327  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |||||||||    
T  252048 ctttaagtttgaggtttataatagattggtcatttaagttattttggtcacacgtaagtcctttaagttt 252117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 387 - 488
Target Start/End: Complemental strand, 14964987 - 14964887
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    ||||| ||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||| || |||| | ||||||| |||||| ||||| |||    
T  14964987 cagaaggactaaattgaaaacctttacaaacttaaaggacttatgtgtgaccaaaataacttaaatgaccaatctgttacaaa-ctcaaacttaaaggac 14964889  T
Q  487 tt 488  Q
    ||    
T  14964888 tt 14964887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 387 - 543
Target Start/End: Complemental strand, 25848445 - 25848288
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    ||||| ||||| || | |||| ||||||||||||||  | || ||||||||||||||||||||| |||  ||| | |||||||||||||| ||||| |||    
T  25848445 cagaaggactaaatcgcaaacgtttacaaacttaaaagatttttgtgtgaccaaaataacttaacggactaatctattacaaacctcaaacttaaaggac 25848346  T
Q  487 ttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    || | |||||| |||||||||||||  |  |||||||||||||  |||||||||||||    
T  25848345 ttgtgtgtgaccaaaataacttaaaggatcaatttattacaaatctcaaacttaaagg 25848288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 413 - 486
Target Start/End: Complemental strand, 46337574 - 46337501
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||||||| |||||||||||||| |||||||||    
T  46337574 caaacttaaaggacttatgtgtgaccaaaataatttaaagaatcaatatgttacaaacctcaaacttaaatgac 46337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 388 - 543
Target Start/End: Complemental strand, 32186619 - 32186463
Alignment:
Q  388 agaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    |||| ||||| || |||||| |||| |||||||||| |||||||||| || ||||||||||||| |||| ||   ||| |||||||||| ||||| ||||    
T  32186619 agaaggactaaatcgaaaacgtttaaaaacttaaaggacttatgtgttacaaaaataacttaaatgatcgatcagttataaacctcaaacttaaaagact 32186520  T
Q  488 tatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||  |||||| |||||| ||||||  || ||| |||||||||| |||||||||||||    
T  32186519 taggtgtgaccaaaatagcttaaaggaccaatatattacaaacctcaaacttaaagg 32186463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 254 - 482
Target Start/End: Complemental strand, 36667359 - 36667141
Alignment:
Q  254 agtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttc 353  Q
    |||||||||||||| |||||| ||||| ||| ||| ||||||||||||||||||||| |||||  |||||||||||||||        |||||||| |||    
T  36667359 agtcctttaagtttaaggtttgtaacagatttgtcctttaagttattttggtcacacataagtcttttaagtttgtaaac-gtagtcgatttagtcattc 36667261  T
Q  354 taccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaa-cttaaagaacttatgtgtgaccaaaataacttaaag 452  Q
    | |||||||||| |||||||||   ||        ||| ||||| ||||||||| |||||||| || |||||  ||||||||||||||||||||||||      
T  36667260 tcccacatcatcgtttttgtaacactt--------gaaggactaaattgaaaacgtttacaaatctaaaaga--ttatgtgtgaccaaaataacttaaga 36667171  T
Q  453 gatcaatattttacaaacctcaaatttaaa 482  Q
    ||  ||| | |||||||||||||| |||||    
T  36667170 gactaatctcttacaaacctcaaacttaaa 36667141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 249 - 332
Target Start/End: Original strand, 14964883 - 14964965
Alignment:
Q  249 acacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    |||| ||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  14964883 acacaagtcctttaagtttgag-tttgtaacagattggtcatttaagttattttggtcacacataagtcctttaagtttgtaaa 14964965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 387 - 482
Target Start/End: Complemental strand, 26724168 - 26724073
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||| |||||||||||||| |||||||||| |||||| |||||||||||||||||||| ||  ||| ||||||||| || ||| |||||    
T  26724168 cagaatgactaaattgaaaacttttataaacttaaaggacttatatgtgaccaaaataacttaaatgactaatcttttacaaatcttaaacttaaa 26724073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 377 - 542
Target Start/End: Complemental strand, 36374971 - 36374805
Alignment:
Q  377 gtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaa 476  Q
    |||||||||| | |||||||| || ||||||||||||||| |||||| | |||| |||||||||||| | ||||||||  ||| | || |||||||||||    
T  36374971 gtttggttaataaaatgactaaatcgaaaacttttacaaatttaaaggatttatttgtgaccaaaattatttaaaggactaatttgttgcaaacctcaaa 36374872  T
Q  477 tttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaag 542  Q
     ||||| |||| ||   |||| ||||||| |||||  || ||||||| |||||| ||||||||||||    
T  36374871 cttaaaggactaatgcatgaccaaaataatttaaatgactaatttataacaaacctcaaacttaaag 36374805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 394 - 543
Target Start/End: Complemental strand, 47069679 - 47069529
Alignment:
Q  394 actagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatg 493  Q
    |||| ||||||||| ||||| |||| |||| ||||||||||||||||||||||| |||| | |||| | ||||||| |||||| |||||  |||||| ||    
T  47069679 actaaattgaaaacgtttacgaactcaaaggacttatgtgtgaccaaaataactaaaagaaccaatttgttacaaaactcaaacttaaagaacttatgtg 47069580  T
Q  494 tgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    |||  |||||||||||||  || ||| | |||||||| ||||| |||||||    
T  47069579 tgatcaaaataacttaaaggaccaatatgttacaaacctcaaatttaaagg 47069529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 394 - 542
Target Start/End: Original strand, 39714545 - 39714694
Alignment:
Q  394 actagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaa-tttaaatgacttatat 492  Q
    |||| ||||||||| |||||||||| |||  |||||||||| | |||||||| ||||| ||||||| | |||||||||||||| || ||| || |||| |    
T  39714545 actaaattgaaaacgtttacaaactcaaatgacttatgtgtaatcaaaataatttaaatgatcaatttattacaaacctcaaacttaaaaggatttatgt 39714644  T
Q  493 gtgactaaaataacttaaaaacaaatttattacaaacgtcaaacttaaag 542  Q
    ||||| ||||||||||||| |  ||| | ||| |||| ||||||||||||    
T  39714645 gtgaccaaaataacttaaacatcaatctgttaaaaacctcaaacttaaag 39714694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 195 - 333
Target Start/End: Original strand, 252048 - 252183
Alignment:
Q  195 ctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaa 294  Q
    ||||| |||||| |||| ||||| |||| |||||||||||   |||||| ||||||   |||||||||||||| |||||| ||||| ||  ||| |||||    
T  252048 ctttaagtttgaggtttataatagattggtcatttaagtt---attttggtcacacgtaagtcctttaagtttaaggtttgtaacagatcagtcttttaa 252144  T
Q  295 gttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    |||||||||||||||  |||||  |||||||||||||||    
T  252145 gttattttggtcacaaataagtcctttaagtttgtaaac 252183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 237 - 333
Target Start/End: Complemental strand, 32186769 - 32186673
Alignment:
Q  237 tattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||| |||||||  ||||||||||||||||||||| ||||| |||| |  |||||||||||||||| |||| ||| || |||||||||||||||    
T  32186769 tattttggtcacacataagtcctttaagtttgaggtttgtaacatattgatgttttaagttattttggttacacataaattctttaagtttgtaaac 32186673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 235 - 334
Target Start/End: Complemental strand, 40286545 - 40286448
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
    |||||||| ||| ||||  ||||||||||||||||||||| ||||| ||||||| ||| ||||||||| ||||||  |||||| ||||||||||||||||    
T  40286545 gttatttttatcgcacataagtcctttaagtttgaggtttgtaacagattggtcttttgagttattttagtcaca--taagttctttaagtttgtaaaca 40286448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 367 - 482
Target Start/End: Complemental strand, 26976494 - 26976379
Alignment:
Q  367 tttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttac 466  Q
    |||||||||||||||||||| |||| | ||| |||||||||  |||||||||||||  | || ||||| |||||||||||||| |||| | || | ||||    
T  26976494 tttttgtaatgtttggttaatagaaggtctaaattgaaaacgattacaaacttaaaagatttttgtgtaaccaaaataacttagaggacctatctgttac 26976395  T
Q  467 aaacctcaaatttaaa 482  Q
    |||||||||| |||||    
T  26976394 aaacctcaaacttaaa 26976379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 201 - 333
Target Start/End: Original strand, 28813846 - 28813974
Alignment:
Q  201 gtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttatt 300  Q
    |||||| |||||||||| ||||||| ||||||||   |||| | ||||| |  ||| ||||||||||||| ||| ||| |||||| ||||||||||||||    
T  28813846 gtttgaggtttgtaatagattgatc-tttaagtt---atttaggtcacatataagttctttaagtttgagatttgtaataaattgatcatttaagttatt 28813941  T
Q  301 ttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    |||||||||| |||||  || ||||||||||||    
T  28813942 ttggtcacacataagtccttcaagtttgtaaac 28813974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 190 - 310
Target Start/End: Complemental strand, 28814138 - 28814021
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    ||||||||||  ||||| |||||||||| |||  || ||||||||   |||||||||| |||  ||| ||||||||||||||||| ||| | ||||||||    
T  28814138 gggtcctttaaatttgaggtttgtaatagattagtcttttaagtt---attttgatcagacataagttctttaagtttgaggtttgtaatagattggtca 28814042  T
Q  290 tttaagttattttggtcacac 310  Q
    ||||||||| |||||||||||    
T  28814041 tttaagttaatttggtcacac 28814021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 394 - 511
Target Start/End: Original strand, 13902990 - 13903107
Alignment:
Q  394 actagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatg 493  Q
    |||| ||||||||| |||||||| |||||| |||||| ||| |||||||||||||||| ||  ||||| |||||||||||| | ||||| || |||| ||    
T  13902990 actaaattgaaaacgtttacaaatttaaaggacttatatgtaaccaaaataacttaaaagactaatatgttacaaacctcagacttaaaggatttatgtg 13903089  T
Q  494 tgactaaaataacttaaa 511  Q
      || |||||||||||||    
T  13903090 caaccaaaataacttaaa 13903107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 388 - 489
Target Start/End: Original strand, 36667260 - 36667361
Alignment:
Q  388 agaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    |||||||||| || ||  || ||||||||||||||  ||||||||||||||||||||||||||||||  ||| | |||||||||| ||| ||||| ||||    
T  36667260 agaatgactaaatcgactacgtttacaaacttaaaagacttatgtgtgaccaaaataacttaaaggacaaatctgttacaaaccttaaacttaaaggact 36667359  T
Q  488 ta 489  Q
    ||    
T  36667360 ta 36667361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 45131600 - 45131523
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaactt-aaagaacttatgtgtgaccaaaataacttaaagga 454  Q
    ||||||||||||||||||||  |||||||| ||||||||||| |||| ||||||||||||| |||||||| |||||||    
T  45131600 tttggttaacagaatgactaagttgaaaacatttacaaacttaaaaggacttatgtgtgacaaaaataacataaagga 45131523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 463 - 542
Target Start/End: Complemental strand, 3169795 - 3169715
Alignment:
Q  463 ttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaag 542  Q
    |||||||||||||| ||||| || ||||||||||||||||||||||||| ||| ||| |||||||||| | ||||||||||    
T  3169795 ttacaaacctcaaacttaaaagatttatatgtgactaaaataacttaaagaaccaatctattacaaaccttaaacttaaag 3169715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 40209854 - 40209918
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaa 451  Q
    ||||||||||| ||||||||||||| ||||||||||  |||||||||||||||||||| ||||||    
T  40209854 cagaatgactaaattgaaaacttttgcaaacttaaacgacttatgtgtgaccaaaatatcttaaa 40209918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 192 - 302
Target Start/End: Complemental strand, 50332771 - 50332664
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||||| |||||| |||||||||||||||||| |||||   ||||||||| | |||||  ||||||||||||||||||||| | |||||||  || |     
T  50332771 gtcctttaagtttgatgtttgtaataaattgatcttttaa---gttattttggttacacataagtcctttaagtttgaggtttgttacaaattaatcctc 50332675  T
Q  292 taagttatttt 302  Q
    |||||||||||    
T  50332674 taagttatttt 50332664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 3169627 - 3169544
Alignment:
Q  386 acagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaa 469  Q
    |||||| ||||| ||||||||| ||||||||||||||  || | ||| ||||||||||||||||||||| |||||| |||||||    
T  3169627 acagaaagactaaattgaaaacatttacaaacttaaaagacctgtgtatgaccaaaataacttaaaggaccaatatgttacaaa 3169544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 403 - 482
Target Start/End: Original strand, 26976491 - 26976570
Alignment:
Q  403 aaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||||||||||   |||| ||||||| |||||| |||||    
T  26976491 aaaacatttacaaacttaaatgacttatgtgtgaccaaaataacttaaaggacttatatgttacaaagctcaaacttaaa 26976570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 416 - 482
Target Start/End: Original strand, 13903072 - 13903138
Alignment:
Q  416 acttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||||| | |||||||  |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  13903072 acttaaaggatttatgtgcaaccaaaataacttaaaggattaatatgttacaaacctcaaatttaaa 13903138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 409 - 482
Target Start/End: Original strand, 39541429 - 39541503
Alignment:
Q  409 tttacaaacttaaa-gaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||||||||||| | |||||| ||||||||||||||||||||||||||||   |||||||||||||| |||||    
T  39541429 tttacaaacttaaaaggacttatatgtgaccaaaataacttaaaggatcaatccgttacaaacctcaaacttaaa 39541503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 394 - 476
Target Start/End: Original strand, 42866077 - 42866159
Alignment:
Q  394 actagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaa 476  Q
    |||| ||| ||||||||||||||||| ||| |||||||||||||||||||  |||||| || |||||| |||||||| |||||    
T  42866077 actaaattaaaaacttttacaaacttgaaggacttatgtgtgaccaaaatttcttaaatgaccaatatattacaaacttcaaa 42866159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 255 - 333
Target Start/End: Complemental strand, 47069807 - 47069729
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    |||||||||||||||||||| ||||| ||||||||||||||| | ||| ||||||  |||||  |||||||||||||||    
T  47069807 gtcctttaagtttgaggtttgtaacagattggtcatttaagtgaatttcgtcacatataagtcctttaagtttgtaaac 47069729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 255 - 332
Target Start/End: Complemental strand, 26976574 - 26976497
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    |||||||||||||||| ||| ||||| ||  ||| ||||||||||||||||||||| |||||  ||||||||||||||    
T  26976574 gtcctttaagtttgagctttgtaacatataagtcctttaagttattttggtcacacataagtcatttaagtttgtaaa 26976497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 431 - 543
Target Start/End: Original strand, 28814021 - 28814134
Alignment:
Q  431 gtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaa-acaaatttattacaaac 529  Q
    ||||||||||| ||||||||| || |||| | |||||||||||||| |||||  |||||| | |||  |||||||||||||| || ||| ||||||||||    
T  28814021 gtgtgaccaaattaacttaaatgaccaatctattacaaacctcaaacttaaagaacttatgtctgatcaaaataacttaaaagactaatctattacaaac 28814120  T
Q  530 gtcaaacttaaagg 543  Q
     ||||| |||||||    
T  28814121 ctcaaatttaaagg 28814134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 413 - 482
Target Start/End: Original strand, 28814063 - 28814132
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||||||||||||||||| ||| |||||||||||||| ||  ||| | ||||||||||||||||||||    
T  28814063 caaacttaaagaacttatgtctgatcaaaataacttaaaagactaatctattacaaacctcaaatttaaa 28814132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 259 - 328
Target Start/End: Complemental strand, 36667454 - 36667385
Alignment:
Q  259 tttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||||||||||||| ||| | ||||||||||| ||||||||||| ||||| |||||| ||||||||||    
T  36667454 tttaagtttgaggtttgtaatagattggtcattttagttattttggacacacctaagttctttaagtttg 36667385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 195 - 333
Target Start/End: Original strand, 27768308 - 27768443
Alignment:
Q  195 ctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaa 294  Q
    ||||| |||||||||||||||||  ||||||||||||   ||||||||||| |||||  | || ||||||| ||| |||| ||| | |||  |||||||     
T  27768308 ctttaagtttgaagtttgtaataggttgatcatttaa---gttattttgattacacataaatcttttaagtatgatgtttgtaaaagattaatcatttat 27768404  T
Q  295 gttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||| |||||| ||| |  |||||||||||||||    
T  27768405 gttattttgatcacacataaatcctttaagtttgtaaac 27768443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 413 - 485
Target Start/End: Complemental strand, 28813909 - 28813838
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatga 485  Q
    |||||||||||||||||| ||||||| ||||||||||||| |||||| | |||||||||||||| ||| ||||    
T  28813909 caaacttaaagaacttatatgtgacctaaataacttaaag-atcaatctattacaaacctcaaacttacatga 28813838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 429 - 529
Target Start/End: Complemental strand, 42866021 - 42865922
Alignment:
Q  429 atgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaaacaaatttattacaaa 528  Q
    |||||||||||||||||| |||| ||| ||| | |||||||  |||||| ||||  ||||||||||||| ||||||| || ||||| |||||||||||||    
T  42866021 atgtgtgaccaaaataacataaatgattaatctgttacaaatatcaaatataaaaaacttatatgtgaccaaaataa-tttaaaaccaatttattacaaa 42865923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 255 - 331
Target Start/End: Original strand, 45131438 - 45131514
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaa 331  Q
    |||||||||||||||||||| ||||| |||| |||||||||||||||| || |||  |||||  |||||||||||||    
T  45131438 gtcctttaagtttgaggtttgtaacagattgatcatttaagttatttttgtaacatataagtcttttaagtttgtaa 45131514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 378 - 489
Target Start/End: Complemental strand, 14624213 - 14624103
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaat 477  Q
    ||||||||| |||| ||||| ||||||||  |||||| |||||||  |||||||||||||||||| |||||||| | | ||| | ||| ||||||||||     
T  14624213 tttggttaatagaaggactaaattgaaaatatttacagacttaaatgacttatgtgtgaccaaaa-aacttaaatgtttaatctgttataaacctcaaac 14624115  T
Q  478 ttaaatgactta 489  Q
    ||||| ||||||    
T  14624114 ttaaaggactta 14624103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 25848699 - 25848575
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| |||||| |||| |||||||||| || ||| |   ||||||||| | |||||  ||||||| ||||||||||||| ||| |||||| ||     
T  25848699 gggtcctttaagtttgaggtttataataaattggtccttttaa--gttattttggtaacacataagtccttaaagtttgaggtttgtaataaattgatct 25848602  T
Q  290 tttaagttattttggtcacacgtaagt 316  Q
    |||||||||||||  |||||| |||||    
T  25848601 tttaagttattttaatcacacataagt 25848575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 14624105 - 14624182
Alignment:
Q  254 agtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    ||||||||||||||||||||||||||| |||   |||||||||| |||||||||||| |||||  ||||||| ||||||    
T  14624105 agtcctttaagtttgaggtttataacagattaaacatttaagtt-ttttggtcacacataagtcatttaagtctgtaaa 14624182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 402 - 535
Target Start/End: Original strand, 36374997 - 36375128
Alignment:
Q  402 gaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaa 501  Q
    |||||| |||||||||||||| ||||||| |||||||||||||| ||||||| ||||| | ||| ||| |||||| |||||  ||||||   |||  |||    
T  36374997 gaaaacgtttacaaacttaaa-aacttatttgtgaccaaaataatttaaagg-tcaatctattataaatctcaaacttaaaaaacttatgcatgatcaaa 36375094  T
Q  502 ataacttaaaaacaaatttattacaaacgtcaaa 535  Q
    ||||||||||||  ||| | |||||||| |||||    
T  36375095 ataacttaaaaaacaatctgttacaaacctcaaa 36375128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 413 - 482
Target Start/End: Original strand, 36667385 - 36667454
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||||||||| ||||| ||||||||||| ||| || |||| | |||||||||||||| |||||    
T  36667385 caaacttaaagaacttaggtgtgtccaaaataactaaaatgaccaatctattacaaacctcaaacttaaa 36667454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 413 - 482
Target Start/End: Original strand, 40286512 - 40286581
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||| ||||||||| ||  ||||||||||||||||||||    ||||||||||||||||||||    
T  40286512 caaacttaaaggacttatgtgcgataaaaataacttaaaggatcaaacggttacaaacctcaaatttaaa 40286581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 189 - 332
Target Start/End: Original strand, 46337498 - 46337638
Alignment:
Q  189 cgggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtc 288  Q
    |||||| |||| |||||| |||||||| | ||||||  ||||| ||   |||||| |||||||  |||||||||||||||| |||| ||||| |||  |     
T  46337498 cgggtcatttaagtttgaggtttgtaacatattgattctttaaatt---attttggtcacacataagtcctttaagtttgaagtttgtaacatattaatt 46337594  T
Q  289 atttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
     ||||||||||||||||||||  ||| |  ||||||||||||||    
T  46337595 ctttaagttattttggtcacagataaatcctttaagtttgtaaa 46337638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 413 - 478
Target Start/End: Complemental strand, 47891181 - 47891116
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatt 478  Q
    ||||||||||  ||||| ||||||||||||||| ||||| ||||||| | ||||||||||||||||    
T  47891181 caaacttaaatgacttaggtgtgaccaaaataatttaaaagatcaatctgttacaaacctcaaatt 47891116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 459
Target Start/End: Complemental strand, 50332584 - 50332519
Alignment:
Q  394 actagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaat 459  Q
    |||| ||||||||| ||||||||||||||  |||||| ||||| ||||||||||||||||| ||||    
T  50332584 actaaattgaaaacgtttacaaacttaaatgacttatatgtgatcaaaataacttaaaggaccaat 50332519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 50332771 - 50332698
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||||||| |||| ||| |||||| || |||||||||||||||| |||| |||||  ||||||||||    
T  50332771 gtcctttaagtttgatgtttgtaataaattgatcttttaagttattttggttacacataagtcctttaagtttg 50332698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 399 - 451
Target Start/End: Original strand, 14624238 - 14624290
Alignment:
Q  399 attgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaa 451  Q
    ||||||||| ||||||||||||||  ||||||||||||||| |||||||||||    
T  14624238 attgaaaacgtttacaaacttaaaagacttatgtgtgaccagaataacttaaa 14624290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 410 - 482
Target Start/End: Complemental strand, 45131514 - 45131442
Alignment:
Q  410 ttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||||||||||  |||||| ||| || ||||||||||||| ||||||| | |||||||||||||| |||||    
T  45131514 ttacaaacttaaaagacttatatgttacaaaaataacttaaatgatcaatctgttacaaacctcaaacttaaa 45131442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 236 - 332
Target Start/End: Original strand, 47573735 - 47573831
Alignment:
Q  236 ttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    ||||||| ||||||||  |||| |||||||||||||||| ||||| |||| || ||||| ||||||||| | | | |||||  ||||||||||||||    
T  47573735 ttatttttatcacacataagtcttttaagtttgaggtttgtaacatattgatcctttaaattattttggccgctcataagtcatttaagtttgtaaa 47573831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 191 - 307
Target Start/End: Complemental strand, 26724349 - 26724238
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcat 290  Q
    ||||||||| |||||| |||||||||| ||||||  ||||||||   |||||  |||||||  |||||||||| |||||||| | ||||| ||| ||  |    
T  26724349 ggtcctttaagtttgaggtttgtaatagattgattctttaagtt---attttcgtcacacataagtcctttaaatttgaggtctctaacagattagt--t 26724255  T
Q  291 ttaagttattttggtca 307  Q
    |||||||||||||||||    
T  26724254 ttaagttattttggtca 26724238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 39714658 - 39714559
Alignment:
Q  235 gttattttgatcacacacgagtccttt-aagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||| |||||||  | |||||| ||||||||||||| ||| |||||| |||||||| |||||||| | |||| |||||  ||| |||||||||||    
T  39714658 gttattttggtcacacataaatccttttaagtttgaggtttgtaataaattgatcatttaaattattttgattacacataagtcatttgagtttgtaaac 39714559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 376 - 451
Target Start/End: Complemental strand, 54343424 - 54343350
Alignment:
Q  376 tgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaa 451  Q
    ||||||||||||| || |||   ||||||||| |||||||||||||||  ||||| ||||||||||||||||||||    
T  54343424 tgtttggttaacataaggaccgaattgaaaacgtttacaaacttaaag-gcttatatgtgaccaaaataacttaaa 54343350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 235 - 316
Target Start/End: Complemental strand, 30955044 - 30954962
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcattt-aagttattttggtcacacgtaagt 316  Q
    ||||||||| |||||||  ||||||||| ||||||| ||| ||| | ||||||| ||| |||||||||||||||||| |||||    
T  30955044 gttattttggtcacacataagtcctttatgtttgagatttgtaagagattggtccttttaagttattttggtcacacataagt 30954962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 235 - 316
Target Start/End: Complemental strand, 30970856 - 30970774
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcattt-aagttattttggtcacacgtaagt 316  Q
    ||||||||| |||||||  ||||||||| ||||||| ||| ||| | ||||||| ||| |||||||||||||||||| |||||    
T  30970856 gttattttggtcacacataagtcctttatgtttgagatttgtaagagattggtccttttaagttattttggtcacacataagt 30970774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 255 - 309
Target Start/End: Complemental strand, 39541507 - 39541453
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcaca 309  Q
    |||||||||||||||||||| ||||  |||| || ||||||||||||||||||||    
T  39541507 gtcctttaagtttgaggtttgtaacggattgatcctttaagttattttggtcaca 39541453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 250 - 328
Target Start/End: Original strand, 46337496 - 46337574
Alignment:
Q  250 cacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||| ||| |||||||||||||||| ||||| |||| |  ||||| ||||||||||||||| |||||  ||||||||||    
T  46337496 cacgggtcatttaagtttgaggtttgtaacatattgattctttaaattattttggtcacacataagtcctttaagtttg 46337574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 13903081 - 13903004
Alignment:
Q  256 tcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    |||||||||| |||||||| ||||| ||| ||| |||||||||||||||| |||  |||||  ||||| |||||||||    
T  13903081 tcctttaagtctgaggtttgtaacatattagtcttttaagttattttggttacatataagtcctttaaatttgtaaac 13903004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 255 - 332
Target Start/End: Original strand, 26724069 - 26724146
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    ||||||||||||| || ||| ||| | ||| ||||||||||||||||||||||||  |||||  ||||||||| ||||    
T  26724069 gtcctttaagtttaagatttgtaaaagattagtcatttaagttattttggtcacatataagtcctttaagtttataaa 26724146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 28814136 - 28814063
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||| |||||||||| ||| | ||| ||| |||||||||||||| ||| || |||||| ||||||||||    
T  28814136 gtcctttaaatttgaggtttgtaatagattagtcttttaagttattttgatcagacataagttctttaagtttg 28814063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 36900209 - 36900140
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagttt 327  Q
    ||||||||||||| ||||||| | ||||||| |||||||||||||||| |||| || ||  |||||||||    
T  36900209 ctttaagtttgagatttataatagattggtcctttaagttattttggttacacataggtcctttaagttt 36900140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 413 - 482
Target Start/End: Original strand, 40209938 - 40210005
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||||||| ||| ||| |||||| |||||    
T  40209938 caaacttaaagaa-ttatgtgtgaccaaaataaattaaa-gatcaatatgttagaaatctcaaacttaaa 40210005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 43650333 - 43650292
Alignment:
Q  193 tcctttatgtttgaagtttgtaataaattgatcatttaagtt 234  Q
    ||||||| ||||||||||||||||||||||||| ||||||||    
T  43650333 tcctttaagtttgaagtttgtaataaattgatcctttaagtt 43650292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 47573694 - 47573767
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||||||||||||||||| ||||| ||| ||| ||||| |||||||  |||||| |||||  ||||||||||    
T  47573694 gtcctttaagtttgaggtttgtaacatattagtcctttaaattatttttatcacacataagtcttttaagtttg 47573767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 255 - 331
Target Start/End: Original strand, 26976375 - 26976451
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaa 331  Q
    |||||||||||||||||||| ||||| || |||| | |||||||||||||| ||||  || |  |||||||||||||    
T  26976375 gtcctttaagtttgaggtttgtaacagataggtcctctaagttattttggttacacaaaaatcttttaagtttgtaa 26976451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 309
Target Start/End: Original strand, 36374805 - 36374916
Alignment:
Q  195 ctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaa 294  Q
    ||||| |||||| |||||| |||||||  |||||||| ||   |||||| |||  ||  |||||||||||||||||||||  |||||||| ||| |||||    
T  36374805 ctttaagtttgaggtttgttataaattagtcatttaaatt---attttggtcatgcattagtcctttaagtttgaggtttgcaacaaattagtcctttaa 36374901  T
Q  295 gttattttggtcaca 309  Q
     | ||||||||||||    
T  36374902 ataattttggtcaca 36374916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 414 - 482
Target Start/End: Original strand, 36900140 - 36900208
Alignment:
Q  414 aaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||||||| || ||||||| ||||||||||||||||||| |||| | ||| ||| |||||| |||||    
T  36900140 aaacttaaaggacctatgtgtaaccaaaataacttaaaggaccaatctattataaatctcaaacttaaa 36900208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 39253793 - 39253845
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacac 310  Q
    |||||||||||| |||| ||||||||||||| ||||| |||||||| ||||||    
T  39253793 ctttaagtttgaagtttgtaacaaattggtcctttaacttattttgatcacac 39253845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 444 - 539
Target Start/End: Original strand, 45131641 - 45131737
Alignment:
Q  444 aacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaactta 539  Q
    |||||||||||  ||| | | |||||||||||| ||||| ||||||||| |||| |||||||||||||  || ||| |||||||||  |||||||||    
T  45131641 aacttaaaggactaatgtgtgacaaacctcaaacttaaaagacttatatatgacaaaaataacttaaaggactaatatattacaaaattcaaactta 45131737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 543
Target Start/End: Original strand, 13903009 - 13903080
Alignment:
Q  473 caaatttaaatgacttatatgtgactaaaataacttaaaa-acaaatttattacaaacgtcaaacttaaagg 543  Q
    |||||||||| ||||||||||| || |||||||||||||| || ||| | |||||||| ||| |||||||||    
T  13903009 caaatttaaaggacttatatgtaaccaaaataacttaaaagactaatatgttacaaacctcagacttaaagg 13903080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 377 - 420
Target Start/End: Original strand, 16106754 - 16106797
Alignment:
Q  377 gtttggttaacagaatgactagattgaaaacttttacaaactta 420  Q
    |||||||||||||||||| |||||||||| | ||||||||||||    
T  16106754 gtttggttaacagaatgaatagattgaaagcgtttacaaactta 16106797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 540
Target Start/End: Complemental strand, 27658053 - 27657986
Alignment:
Q  473 caaatttaaatgacttatatgtgactaaaataacttaaaaacaaatttattacaaacgtcaaacttaa 540  Q
    |||| |||||||| |||| ||||||| ||||||||||||||| ||| | | |||||| ||||||||||    
T  27658053 caaacttaaatgatttatgtgtgactgaaataacttaaaaactaatgtgtgacaaacctcaaacttaa 27657986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 268
Target Start/End: Original strand, 28813899 - 28813969
Alignment:
Q  195 ctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttg 268  Q
    ||||| ||||||  |||||||||||||||||||||||   ||||||||| |||||||  ||||||| |||||||    
T  28813899 ctttaagtttgagatttgtaataaattgatcatttaa---gttattttggtcacacataagtccttcaagtttg 28813969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 258 - 332
Target Start/End: Complemental strand, 40209948 - 40209876
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    ||||||||||||||| |  |||| ||||||  |||||| |||||||||||||| ||||| ||||||||||| |||    
T  40209948 ctttaagtttgaggtctcgaacagattggt--tttaagatattttggtcacacataagtcgtttaagtttgcaaa 40209876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 332
Target Start/End: Complemental strand, 42866163 - 42866092
Alignment:
Q  261 taagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    ||||||||| |||| ||| | ||||||||||||||  ||||||||||||| |||||  || |||||||||||    
T  42866163 taagtttgaagtttgtaatatattggtcatttaagaaattttggtcacacataagtccttcaagtttgtaaa 42866092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 47891118 - 47891181
Alignment:
Q  265 tttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||||||| ||||| |||| || ||||| ||||||||||||||| |||||  ||||||||||    
T  47891118 tttgaggtttgtaacagattgatcttttaaattattttggtcacacctaagtcatttaagtttg 47891181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 5442494 - 5442568
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcaca 309  Q
    ||||||||| ||||| |  | ||||||||||||||||||| |||   ||| ||| ||||||||||||||||||||    
T  5442494 gttattttggtcacatataactcctttaagtttgaggtttgtaaatgattcgtcctttaagttattttggtcaca 5442568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 482
Target Start/End: Original strand, 25848623 - 25848693
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataactt-aaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||| ||| |||||||||| ||||||||||||| |||||| |||| | ||| |||||||||| |||||    
T  25848623 caaactttaaggacttatgtgttaccaaaataacttaaaaggaccaatttattataaacctcaaacttaaa 25848693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 451
Target Start/End: Original strand, 30955011 - 30955049
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaa 451  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  30955011 caaacataaaggacttatgtgtgaccaaaataacttaaa 30955049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 451
Target Start/End: Original strand, 30970823 - 30970861
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaa 451  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  30970823 caaacataaaggacttatgtgtgaccaaaataacttaaa 30970861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 32186738 - 32186784
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaat 459  Q
    ||||||||||| |||||||||||||||||||| ||| || |||||||    
T  32186738 caaacttaaaggacttatgtgtgaccaaaatagcttcaaagatcaat 32186784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 40209715 - 40209811
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    |||||||||||||||||  |||  ||||| |||||||||| ||| | |||| || |||||||| ||||| |||||| |||| | |||||||||||||||    
T  40209715 gttattttgatcacacataagt-atttaaatttgaggtttctaatagattgatcttttaagttgttttgttcacacataag-tctttaagtttgtaaac 40209811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 40286244 - 40286310
Alignment:
Q  262 aagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||||| |||| ||||||||| ||| || ||||||||||| |||||| |||||  ||||||||||    
T  40286244 aagtttgatgtttgtaacaaattagtccttcaagttattttgatcacacataagtcctttaagtttg 40286310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 439 - 489
Target Start/End: Original strand, 41165798 - 41165848
Alignment:
Q  439 aaaataacttaaaggatcaatattttacaaacctcaaatttaaatgactta 489  Q
    |||||||||||||| |||||| | | ||||||||||||||||||| |||||    
T  41165798 aaaataacttaaagaatcaatttataacaaacctcaaatttaaataactta 41165848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 43649990 - 43650056
Alignment:
Q  262 aagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||| ||| ||| ||||||||| ||||||||||||| ||||||| ||| |  ||||||||||    
T  43649990 aagtttgagatttgtaataaattggtcttttaagttattttcgtcacacataaatcctttaagtttg 43650056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 381 - 482
Target Start/End: Complemental strand, 3377132 - 3377031
Alignment:
Q  381 ggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaattta 480  Q
    ||||||| ||||||||| |||| | ||||||||||| |||||| || ||| ||| || |||  ||||||||||| | || | |||||||| ||||| |||    
T  3377132 ggttaacggaatgactaaattgtacacttttacaaagttaaaggacctatctgttacaaaacaaacttaaaggacctatctgttacaaacgtcaaactta 3377033  T
Q  481 aa 482  Q
    ||    
T  3377032 aa 3377031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 473 - 542
Target Start/End: Original strand, 14624252 - 14624321
Alignment:
Q  473 caaatttaaatgacttatatgtgactaaaataacttaaaaacaaatttattacaaacgtcaaacttaaag 542  Q
    |||| ||||| ||||||| |||||| | |||||||||||| | ||| |||||||||| | ||||||||||    
T  14624252 caaacttaaaagacttatgtgtgaccagaataacttaaaatctaatctattacaaacattaaacttaaag 14624321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 316
Target Start/End: Complemental strand, 26724348 - 26724287
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagt 316  Q
    |||||||||||||||||||| ||| | |||| |  ||||||||||||| ||||||| |||||    
T  26724348 gtcctttaagtttgaggtttgtaatagattgattctttaagttattttcgtcacacataagt 26724287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 445 - 541
Target Start/End: Original strand, 36667357 - 36667454
Alignment:
Q  445 acttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaa 541  Q
    |||||||||||||||   |||||||||||||| |||||  |||||  |||| | ||||||||| |||  || ||| |||||||||| |||||||||||    
T  36667357 acttaaaggatcaatcagttacaaacctcaaacttaaagaacttaggtgtgtccaaaataactaaaatgaccaatctattacaaacctcaaacttaaa 36667454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 413 - 482
Target Start/End: Original strand, 43650261 - 43650330
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||| | ||||||   |||| ||||||||||||||||||| | |||||||| ||||| |||||    
T  43650261 caaacttaaagtatttatgttcaaccagaataacttaaaggatcaatttattacaaacttcaaacttaaa 43650330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 136; Significance: 1e-70; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 255 - 543
Target Start/End: Original strand, 25894964 - 25895252
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttct 354  Q
    |||||||||||||||| ||| ||||||||||||| ||||||||||||||||| ||  |||||  ||||||||||||||||       |||||||||||||    
T  25894964 gtcctttaagtttgagatttgtaacaaattggtcctttaagttattttggtcgcatataagtcctttaagtttgtaaacatttttg-atttagtccttct 25895062  T
Q  355 accacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaagga 454  Q
    ||||||||||| |||||||||||||||||||||| || ||||| ||||||||| |||||||||| |||| ||||||||||||| |||||||||||||||     
T  25895063 accacatcatcgtttttgtaatgtttggttaacaaaaggactaaattgaaaacgtttacaaactgaaaggacttatgtgtgactaaaataacttaaaggt 25895162  T
Q  455 tcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||| | |||||||||| ||| ||||| ||||| | |||||| |||||||||||||  || ||| | |||||||| |||||||||||||    
T  25895163 tcaatctgttacaaaccttaaacttaaaggacttttgtgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaagg 25895252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 258 - 511
Target Start/End: Original strand, 31630127 - 31630377
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctacc 357  Q
    ||||||||||||||||| ||||| |||| || ||||||||||||||||||||| |||||  |||||||||||||||        ||||||||||||| ||    
T  31630127 ctttaagtttgaggtttgtaacagattgatcctttaagttattttggtcacacataagtcttttaagtttgtaaac-gttttcgatttagtccttctgcc 31630225  T
Q  358 acatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatca 457  Q
    |||||||| |||||||||  ||||||||||| |||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||  | ||    
T  31630226 acatcatcgtttttgtaacatttggttaacaaaatgactaaattgaaaacatttacaaacttaaag-acttatgtgtgaccaaaataacttaaa-aacca 31630323  T
Q  458 atattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa 511  Q
    || | |||| ||||||||||||||| ||||| | |||||| |||||||||||||    
T  31630324 atctattactaacctcaaatttaaaggacttttgtgtgaccaaaataacttaaa 31630377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 190 - 542
Target Start/End: Complemental strand, 5009512 - 5009160
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| |||||| |||||||| | |||| || ||||||||    ||||  |||||||  ||| ||||||||||||||||| ||||| |||| ||     
T  5009512 gggtcctttaagtttgaggtttgtaacatattggtcttttaagtt----tttttgtcacacataagtactttaagtttgaggtttgtaacatattgatcc 5009417  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacag 389  Q
    ||||||||||||| ||||||| ||| |  |||||||||||||||        ||||||| ||||| |||||||||| |||||||||||||||||||| ||    
T  5009416 tttaagttatttttgtcacacataa-tcctttaagtttgtaaac-gttttcaatttagttcttctgccacatcatcgtttttgtaatgtttggttaagag 5009319  T
Q  390 aatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaagg----atcaatattttacaaacctcaaatttaaatga 485  Q
    || ||||| ||||||||| ||||||||| ||||  |||||||||||| |||||||||||||| |    || ||| | ||||||||| |||| ||||||||    
T  5009318 aaggactaaattgaaaacatttacaaacataaaagacttatgtgtgatcaaaataacttaaatgacaaattaatctgttacaaaccacaaacttaaatga 5009219  T
Q  486 cttatatgtgactaaaataacttaaaa--acaaatttattacaaacgtcaaacttaaag 542  Q
    ||||| |||||  ||||||||||||||  || ||| |||||||||| ||||||||||||    
T  5009218 cttatgtgtgaacaaaataacttaaaaggaccaatctattacaaacctcaaacttaaag 5009160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 387 - 543
Target Start/End: Complemental strand, 31630223 - 31630068
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    ||||| ||||| || |||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| |||    
T  31630223 cagaaggactaaatcgaaaacgtttacaaacttaaaagacttatgtgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacttaaa-gac 31630125  T
Q  487 ttatatgtgactaaaataacttaaaaacaaatttattacaaacgtcaaacttaaagg 543  Q
    |||  |||||| ||||||| ||| |||||||| |||||||||| |||||||||||||    
T  31630124 ttaggtgtgaccaaaataatttataaacaaatctattacaaacctcaaacttaaagg 31630068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 236 - 511
Target Start/End: Original strand, 3876768 - 3877041
Alignment:
Q  236 ttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacan 335  Q
    |||||||| |||||||  ||||||||||| ||||||| | ||||| |||| || |||| |||||||| |  |||| |||||  |||||||||||||||      
T  3876768 ttattttggtcacacataagtcctttaagattgaggtctgtaacatattgatc-tttatgttatttttgctacacataagtcatttaagtttgtaaac-g 3876865  T
Q  336 nnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtg 435  Q
          ||| |||| |||| || ||||||| |||||||||||||||||||| |||| ||||| |||| |||  |||||| || ||||| |||||||||||    
T  3876866 ttttcaattaagtcattctgccccatcatcgtttttgtaatgtttggttaatagaaggactaaattggaaaggtttacatacgtaaaggacttatgtgtg 3876965  T
Q  436 accaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa 511  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||  |||||| | |||  ||||||| |||||    
T  3876966 accaaaataacttaaaagatcaatttattacaaacctcaaatttaaagaacttatgtttgaacaaaataatttaaa 3877041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 394 - 543
Target Start/End: Original strand, 5009360 - 5009508
Alignment:
Q  394 actagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatg 493  Q
    |||| ||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||  |||||| ||    
T  5009360 actaaattgaaaacgtttacaaacttaaagga-ttatgtgtgacaaaaataacttaaaggatcaatatgttacaaacctcaaacttaaagtacttatgtg 5009458  T
Q  494 tgactaaaataacttaaaa-acaaatttattacaaacgtcaaacttaaagg 543  Q
    |||| |||| ||||||||| || ||| | |||||||| |||||||||||||    
T  5009459 tgac-aaaaaaacttaaaagaccaatatgttacaaacctcaaacttaaagg 5009508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 378 - 543
Target Start/End: Complemental strand, 44556692 - 44556526
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaat 477  Q
    ||||||||| ||||  |||| ||||||||| | |  |||||||||| |||||||||||| |||||||| ||||||||||||| | ||||||||||||||     
T  44556692 tttggttaatagaagaactaaattgaaaacgtatgtaaacttaaaggacttatgtgtgatcaaaataagttaaaggatcaatttattacaaacctcaaac 44556593  T
Q  478 ttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||| ||||||| |||||| |||| ||||||||  || ||| |||||||||| | |||||||||||    
T  44556592 ttaaaggacttatgtgtgacaaaaaaaacttaaatgaccaatctattacaaaccttaaacttaaagg 44556526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 195 - 371
Target Start/End: Complemental strand, 29380028 - 29379855
Alignment:
Q  195 ctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaa 294  Q
    ||||| |||||| ||||||||||||||| |||||||||||   ||||||  | ||||  | |||||||||||||| |||| ||||| ||| ||| |||||    
T  29380028 ctttaagtttgaggtttgtaataaattggtcatttaagtt---attttggcctcacataattcctttaagtttgacgtttgtaacatattagtcctttaa 29379932  T
Q  295 gttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcattttt 371  Q
     ||||||||||||||| |||||| |||||| |||||||||       ||||||||||||| ||||||||||||||||    
T  29379931 attattttggtcacacataagttctttaagattgtaaacattttttgatttagtccttctgccacatcatcattttt 29379855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 378 - 482
Target Start/End: Original strand, 36694484 - 36694588
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaat 477  Q
    |||||||||||||| ||||| |||||||  |||||||||||||||| ||||||||||||||||||||| |||||||| |||| | ||||||||||||||     
T  36694484 tttggttaacagaaagactaaattgaaattttttacaaacttaaaggacttatgtgtgaccaaaataatttaaaggaccaatctgttacaaacctcaaaa 36694583  T
Q  478 ttaaa 482  Q
    |||||    
T  36694584 ttaaa 36694588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 360 - 451
Target Start/End: Original strand, 11791751 - 11791842
Alignment:
Q  360 atcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaa 451  Q
    |||||| ||||||||| |||||||||||| |||||||| ||||||||| |||||||||||| || |||||||||||||||||||||||||||    
T  11791751 atcatcgtttttgtaacgtttggttaacaaaatgactaaattgaaaacgtttacaaacttataggacttatgtgtgaccaaaataacttaaa 11791842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 409 - 542
Target Start/End: Original strand, 29379894 - 29380028
Alignment:
Q  409 tttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataactt 508  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||  ||||| |||||||| ||||| ||||| || |||| || | | ||||||||||    
T  29379894 tttacaatcttaaagaacttatgtgtgaccaaaataatttaaaggactaatatgttacaaacgtcaaacttaaaggaattatgtgaggccaaaataactt 29379993  T
Q  509 aaa-aacaaatttattacaaacgtcaaacttaaag 542  Q
    |||  || |||||||||||||| ||||||||||||    
T  29379994 aaatgaccaatttattacaaacctcaaacttaaag 29380028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 425 - 543
Target Start/End: Original strand, 36217161 - 36217277
Alignment:
Q  425 acttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaaacaaatttatta 524  Q
    ||||||||||||||||||||| |||||| |||||| | |||||||||||||| ||||| ||||||| |||||| |||||||||||||| | ||||| |||    
T  36217161 acttatgtgtgaccaaaataatttaaag-atcaatctgttacaaacctcaaacttaaaagacttatgtgtgaccaaaataacttaaaatc-aatttgtta 36217258  T
Q  525 caaacgtcaaacttaaagg 543  Q
    ||||| |||||||||||||    
T  36217259 caaacctcaaacttaaagg 36217277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 368 - 482
Target Start/End: Original strand, 4188973 - 4189087
Alignment:
Q  368 ttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttaca 467  Q
    |||| ||| |||||||||||| |||||||| ||||||||| |||| |||||||| | |||||| ||||| ||||||||||||||||| | |||| |||||    
T  4188973 ttttataacgtttggttaacaaaatgactaaattgaaaacgtttataaacttaatggacttatatgtgatcaaaataacttaaaggacctatatattaca 4189072  T
Q  468 aacctcaaatttaaa 482  Q
    ||||||||| |||||    
T  4189073 aacctcaaacttaaa 4189087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 201 - 391
Target Start/End: Original strand, 4511397 - 4511582
Alignment:
Q  201 gtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttatt 300  Q
    |||||| |||||||||| |||| |||||||||||   || ||| | |||||| |||| ||||| |||||||||| |||||| |||||| |||| ||||||    
T  4511397 gtttgaggtttgtaatagattggtcatttaagtt---atattggttacacacaagtcatttaaatttgaggtttgtaacaa-ttggtcgtttatgttatt 4511492  T
Q  301 ttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaa 391  Q
    ||||| |||| |||||  ||||||||||||||||       ||||| ||||||| |||||||||| ||||||||||||||| |||| ||||    
T  4511493 ttggttacacataagtcatttaagtttgtaaaca-ttttcgatttaatccttctgccacatcatcgtttttgtaatgtttgattaatagaa 4511582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 68 - 160
Target Start/End: Complemental strand, 37622957 - 37622864
Alignment:
Q  68 atcataatctgcaataaatgatatttatcatatacctttaaactattataggtgtatatacctgtt-aaaaataggtaataatctggtgtggca 160  Q
    |||||||| ||||  |||| |||||||||||||||||||||||||||||||| |||||||||| || |||||| ||||||||||||||||||||    
T  37622957 atcataatttgcacgaaataatatttatcatatacctttaaactattataggagtatatacctattaaaaaatgggtaataatctggtgtggca 37622864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 61 - 160
Target Start/End: Original strand, 8975137 - 8975237
Alignment:
Q  61 ataagtaatcataatctgcaataaatgatatttatcatatacctttaaactattataggtgtatatacctgtt-aaaaataggtaataatctggtgtggc 159  Q
    |||||| |||||||| ||||  |||| ||||||||||||||||||||||||||||||| ||||||||||| || |||||| ||||||||| |||||||||    
T  8975137 ataagttatcataatttgcacgaaataatatttatcatatacctttaaactattatagatgtatatacctattaaaaaatgggtaataatatggtgtggc 8975236  T
Q  160 a 160  Q
    |    
T  8975237 a 8975237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 387 - 511
Target Start/End: Complemental strand, 9501063 - 9500939
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    ||||| ||||| || |||||| ||||||||||||||| ||||||||||||| |||||||||||||| | | || | |||||||||||||| ||||  |||    
T  9501063 cagaaggactaaatcgaaaacgtttacaaacttaaaggacttatgtgtgactaaaataacttaaagaagcgatctgttacaaacctcaaacttaagggac 9500964  T
Q  487 ttatatgtgactaaaataacttaaa 511  Q
    |||  |||||| |||||||||||||    
T  9500963 ttaagtgtgaccaaaataacttaaa 9500939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 367 - 450
Target Start/End: Complemental strand, 4188740 - 4188657
Alignment:
Q  367 tttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaa 450  Q
    |||||||||||||||||||| ||||||| || ||||||||| |||| |||||||||| |||| |||||||||||||||||||||    
T  4188740 tttttgtaatgtttggttaatagaatgaataaattgaaaacgtttagaaacttaaaggacttgtgtgtgaccaaaataacttaa 4188657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 209 - 482
Target Start/End: Complemental strand, 12612724 - 12612449
Alignment:
Q  209 tttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcac 308  Q
    ||||||||| ||||||| ||||| ||   |||||||||| ||   ||| |||||||||| |||||| ||||| |||  |||||||| |||||||| |||     
T  12612724 tttgtaatagattgatcttttaaatt---attttgatcatacctaagttctttaagttttaggtttgtaacatattaatcatttaaattattttgctcat 12612628  T
Q  309 acgtaagttgtttaa-------gtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagatt 401  Q
    || |||||  |||||       |||||||||||       |||| ||| |||| | |||||||| |||| |||||||||||||||||||| || || |||    
T  12612627 acataagtcttttaaattttaggtttgtaaacatttttcgattttgtcattctgcaacatcatcgtttt-gtaatgtttggttaacagaa-gagtaaatt 12612530  T
Q  402 gaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||| ||||||||||||||  |||||||||||| |||||||| ||||| || |||| | |||||||||| ||| |||||    
T  12612529 gaaaacatttacaaacttaaatgacttatgtgtgatcaaaataatttaaaagaccaatctattacaaaccttaaacttaaa 12612449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 378 - 543
Target Start/End: Complemental strand, 30265546 - 30265381
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaat 477  Q
    |||| ||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||| |||| |||||||| ||  ||| | ||| ||||| ||||     
T  30265546 tttgtttaacagaatgactaaattgaaaacgtttacaaacttaaagcacttatgtgtgacaaaaagaacttaaatgactaatctattagaaaccccaaa- 30265448  T
Q  478 ttaaatgacttatatgtgactaaaataacttaa-aaacaaatttattacaaacgtcaaacttaaagg 543  Q
    |||||  ||| ||  ||||| ||||||| ||||   || |||||||||||||| |||||||||||||    
T  30265447 ttaaagaactgatgcgtgaccaaaataatttaatggaccaatttattacaaacctcaaacttaaagg 30265381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 404 - 482
Target Start/End: Original strand, 43699435 - 43699513
Alignment:
Q  404 aaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||| ||||||||||||||  ||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||    
T  43699435 aaacatttacaaacttaaaagacttatgtgtgaccaaaataaattaaaggatcaatatgttacaaacctcaaacttaaa 43699513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 404 - 511
Target Start/End: Complemental strand, 1316176 - 1316069
Alignment:
Q  404 aaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaat 503  Q
    |||| ||||||||||||||| ||||||||| || ||||||||||||||| |   |||| ||||||||||||||  |||| ||||||| |||||| |||||    
T  1316176 aaacgtttacaaacttaaaggacttatgtgcgatcaaaataacttaaagaacatatatgttacaaacctcaaacataaaggacttatgtgtgaccaaaat 1316077  T
Q  504 aacttaaa 511  Q
    ||||||||    
T  1316076 aacttaaa 1316069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 367 - 541
Target Start/End: Original strand, 14166348 - 14166521
Alignment:
Q  367 tttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttac 466  Q
    |||||||||  |||| |||| |||| ||||| ||||||||| |||| ||||||||||   |||||||||| ||| ||||||||||  |||||| | ||||    
T  14166348 tttttgtaacatttgcttaatagaaggactaaattgaaaacgtttaaaaacttaaagggtttatgtgtgaacaagataacttaaaa-atcaatttgttac 14166446  T
Q  467 aaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaa 541  Q
     ||||||||| ||||| ||||||| |||||| |||||||||||||  ||  || |||||||||| |||||||||||    
T  14166447 gaacctcaaagttaaa-gacttatgtgtgacaaaaataacttaaaggacctatctattacaaacatcaaacttaaa 14166521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 413 - 541
Target Start/End: Original strand, 36217208 - 36217331
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaa 512  Q
    ||||||||||  |||||||||||||||||||||||||||  |||||| | |||||||||||||| ||||| ||||||||| | || ||||||||||        
T  36217208 caaacttaaaagacttatgtgtgaccaaaataacttaaa--atcaatttgttacaaacctcaaacttaaaggacttatatataacaaaaataactt---g 36217302  T
Q  513 acaaatttattacaaacgtcaaacttaaa 541  Q
    || |||||||||||||  |||||||||||    
T  36217303 accaatttattacaaaactcaaacttaaa 36217331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 409 - 537
Target Start/End: Complemental strand, 4511524 - 4511396
Alignment:
Q  409 tttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataactt 508  Q
    ||||||||||||||  |||||||||| ||||||||||| |||| || |||| | |||||||||||||||||||||||||| | ||| || || |||||||    
T  4511524 tttacaaacttaaatgacttatgtgtaaccaaaataacataaacgaccaat-tgttacaaacctcaaatttaaatgacttgtgtgtaaccaatataactt 4511426  T
Q  509 aaa-aacaaatttattacaaacgtcaaact 537  Q
    |||  || ||| |||||||||| |||||||    
T  4511425 aaatgaccaatctattacaaacctcaaact 4511396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 191 - 327
Target Start/End: Original strand, 44556523 - 44556656
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcat 290  Q
    ||||||||| |||| | |||||||||| |||| ||||||||||| ||  |||| |||||||  ||||||||||||||||||||| ||| |||||| || |    
T  44556523 ggtcctttaagtttaaggtttgtaatagattggtcatttaagttttt--tttg-tcacacataagtcctttaagtttgaggtttgtaataaattgatcct 44556619  T
Q  291 ttaagttattttggtcacacgtaagttgtttaagttt 327  Q
    |||| |||||||| |||||| |||||  |||||||||    
T  44556620 ttaacttattttgatcacacataagtcctttaagttt 44556656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 192 - 333
Target Start/End: Complemental strand, 25895254 - 25895116
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||||| |||||| |||||||| | |||| || ||||||||   |||||| |||||||  |||||||||||||| |||||| ||||| ||||  | ||    
T  25895254 gtcctttaagtttgaggtttgtaacagattggtcctttaagtt---attttggtcacacaaaagtcctttaagtttaaggtttgtaacagattgaacctt 25895158  T
Q  292 taagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||||| ||||||| |||||  ||| |||||||||||    
T  25895157 taagttattttagtcacacataagtcctttcagtttgtaaac 25895116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 388 - 511
Target Start/End: Complemental strand, 39442391 - 39442268
Alignment:
Q  388 agaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    ||||| |||| |||||| || ||||||||||||||  |||||  ||| |||||| ||| ||||| ||||||| | ||||||| |||||| ||||||||||    
T  39442391 agaataactaaattgaatacctttacaaacttaaatgacttacatgtaaccaaagtaaattaaatgatcaatttgttacaaatctcaaacttaaatgact 39442292  T
Q  488 tatatgtgactaaaataacttaaa 511  Q
    ||| |||||| ||||||| |||||    
T  39442291 tatgtgtgacaaaaataatttaaa 39442268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 387 - 505
Target Start/End: Complemental strand, 3876885 - 3876768
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    ||||||||||  ||||||||| ||||||||||||||  ||||||||||  | |||||||| |||| ||||||||| ||||| |||||||  ||||| |||    
T  3876885 cagaatgacttaattgaaaacgtttacaaacttaaatgacttatgtgtagcaaaaataacataaa-gatcaatatgttacagacctcaatcttaaaggac 3876787  T
Q  487 ttatatgtgactaaaataa 505  Q
    |||| |||||| |||||||    
T  3876786 ttatgtgtgaccaaaataa 3876768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 25895256 - 25895182
Alignment:
Q  253 gagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagttt 327  Q
    |||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||  ||||  |||||||||    
T  25895256 gagtcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacacaaaagtcctttaagttt 25895182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 413 - 482
Target Start/End: Complemental strand, 1316107 - 1316038
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||| ||||| ||||||||||||||||||||||||||| |||| || | ||||||||||||||||||||    
T  1316107 caaacataaaggacttatgtgtgaccaaaataacttaaacgatctatctattacaaacctcaaatttaaa 1316038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 378 - 451
Target Start/End: Original strand, 8035440 - 8035513
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaa 451  Q
    ||||||||||| |||||||| ||| ||||| |||||||||||||| ||||||||| | ||||||||||||||||    
T  8035440 tttggttaacataatgactaaattaaaaacgtttacaaacttaaaaaacttatgtataaccaaaataacttaaa 8035513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 414 - 487
Target Start/End: Original strand, 25895182 - 25895255
Alignment:
Q  414 aaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    |||||||||| |||| ||||||||||||||||||||||||| |||| | |||||||||||||| ||||| ||||    
T  25895182 aaacttaaaggacttttgtgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggact 25895255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 393 - 543
Target Start/End: Original strand, 33847619 - 33847769
Alignment:
Q  393 gactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatat 492  Q
    ||||| ||||||||  |||| |||||||||| |||||| || ||||||||||| |||||||| |||| | |||| |   ||||||||||| ||||||| |    
T  33847619 gactaaattgaaaatgtttaaaaacttaaaggacttatatgcgaccaaaataatttaaaggaccaatctgttac-actttcaaatttaaaggacttatgt 33847717  T
Q  493 gtgactaaaataacttaaa--aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||| |||||||||||||  ||| ||| | |||||||| |||||||||||||    
T  33847718 gtgaccaaaataacttaaaggaac-aatatgttacaaacatcaaacttaaagg 33847769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 255 - 332
Target Start/End: Complemental strand, 43699517 - 43699440
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    |||||||||||||||||||| ||||| |||| || ||||| ||||||||||||||| |||||  ||||||||||||||    
T  43699517 gtcctttaagtttgaggtttgtaacatattgatcctttaatttattttggtcacacataagtcttttaagtttgtaaa 43699440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 36217279 - 36217161
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||||| |||||| |||||||| ||||||||  ||||||||   |||||| |||||||  |||| |||||||||||||||| ||||| |||| || ||    
T  36217279 gtcctttaagtttgaggtttgtaacaaattgat--tttaagtt---attttggtcacacataagtcttttaagtttgaggtttgtaacagattgatc-tt 36217186  T
Q  292 taagttattttggtcacacgtaagt 316  Q
    ||| ||||||||||||||| |||||    
T  36217185 taaattattttggtcacacataagt 36217161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 254 - 328
Target Start/End: Complemental strand, 36217280 - 36217208
Alignment:
Q  254 agtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||||||||||||| |||||||||| |  ||||||||||||||||||||| |||||  ||||||||||    
T  36217280 agtcctttaagtttgaggtttgtaacaaattgat--tttaagttattttggtcacacataagtcttttaagtttg 36217208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 193 - 333
Target Start/End: Original strand, 1316035 - 1316172
Alignment:
Q  193 tcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcattt 292  Q
    |||||||  ||||| |||||||||| || |||| ||||||||   |||||| |||||||  ||||||||| ||||||||||| ||||| ||  ||  |||    
T  1316035 tcctttaaatttgaggtttgtaatagatagatcgtttaagtt---attttggtcacacataagtcctttatgtttgaggtttgtaacatatatgttcttt 1316131  T
Q  293 aagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||||| || ||| |||||  |||||||||||||||    
T  1316132 aagttattttgatcgcacataagtcctttaagtttgtaaac 1316172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 11791380 - 11791454
Alignment:
Q  259 tttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||| ||| |||||||| |||| |||  ||||| |||||||||||||||||||||| |||||||||||||||    
T  11791380 tttaagtatgacgtttataataaataggtattttaaattattttggtcacacgtaagttatttaagtttgtaaac 11791454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 258 - 332
Target Start/End: Complemental strand, 36694589 - 36694515
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    |||||| |||||||||| ||||| ||||||| ||||| ||||||||||||||| |||||  ||||||||||||||    
T  36694589 ctttaattttgaggtttgtaacagattggtcctttaaattattttggtcacacataagtcctttaagtttgtaaa 36694515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 409 - 482
Target Start/End: Complemental strand, 25895041 - 25894968
Alignment:
Q  409 tttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||||||| |||||| || |||||||||||||||||||| |||| | ||||||| |||||| |||||    
T  25895041 tttacaaacttaaaggacttatatgcgaccaaaataacttaaaggaccaatttgttacaaatctcaaacttaaa 25894968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 375 - 451
Target Start/End: Complemental strand, 4512018 - 4511942
Alignment:
Q  375 atgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaa 451  Q
    |||||| |||| ||||||||| | ||||||||  ||||||||||||||| |||||| ||||| ||||||||||||||    
T  4512018 atgttttgttaccagaatgacgaaattgaaaatgtttacaaacttaaaggacttatatgtgatcaaaataacttaaa 4511942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 236 - 332
Target Start/End: Original strand, 39442274 - 39442370
Alignment:
Q  236 ttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    |||||||  |||||||  |||| |||||||||||| ||| |||||||||| |||||||| ||| |||||| ||| ||||||  ||||||||||||||    
T  39442274 ttatttttgtcacacataagtcatttaagtttgagatttgtaacaaattgatcatttaatttactttggttacatgtaagtcatttaagtttgtaaa 39442370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 253 - 304
Target Start/End: Complemental strand, 29380033 - 29379982
Alignment:
Q  253 gagtcctttaagtttgaggtttataacaaattggtcatttaagttattttgg 304  Q
    |||| ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  29380033 gagttctttaagtttgaggtttgtaataaattggtcatttaagttattttgg 29379982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 219 - 332
Target Start/End: Complemental strand, 31630385 - 31630277
Alignment:
Q  219 attgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttg 318  Q
    ||||||||||||||||   |||||| |||||||  |||||||||| |||||||||  ||| | ||||||  ||||||||||||||||||||| |||| |     
T  31630385 attgatcatttaagtt---attttggtcacacaaaagtcctttaaatttgaggttagtaatagattggtt-tttaagttattttggtcacacataag-tc 31630291  T
Q  319 tttaagtttgtaaa 332  Q
    ||||||||||||||    
T  31630290 tttaagtttgtaaa 31630277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 332
Target Start/End: Original strand, 5009155 - 5009299
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataaca----aattg 285  Q
    |||| ||||| |||||| |||||||||| |||| || ||| |   ||||||||| |||||||  |||| |||||||||| ||||| |||||    ||||     
T  5009155 gggttctttaagtttgaggtttgtaatagattggtccttttaa--gttattttgttcacacataagtcatttaagtttgtggtttgtaacagattaattt 5009252  T
Q  286 gtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    |||||||||||||||||| |||||| |||||  |||| |||||||||    
T  5009253 gtcatttaagttattttgatcacacataagtcttttatgtttgtaaa 5009299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 9500944 - 9501042
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||| ||||||   ||||| ||||||||||||||| ||||| || | |  ||||||||||||| ||||||| |||||  |||||||||||||||    
T  9500944 gttattttggtcacacttaagtcccttaagtttgaggtttgtaacagatcgcttctttaagttattttagtcacacataagtcctttaagtttgtaaac 9501042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 491
Target Start/End: Original strand, 31630339 - 31630417
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttata 491  Q
    |||| |||||| |||| |||||||||||||||||||||| ||||||| || || |||||||||| |||||  |||||||    
T  31630339 caaatttaaaggacttttgtgtgaccaaaataacttaaatgatcaatcttctataaacctcaaacttaaagaacttata 31630417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 236 - 333
Target Start/End: Complemental strand, 3877035 - 3876938
Alignment:
Q  236 ttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    |||||||| ||| |||  ||| |||||| |||||||||| ||| |||||| || ||||||||||||||||||||| |||||  |||| || |||||||    
T  3877035 ttattttgttcaaacataagttctttaaatttgaggtttgtaataaattgatcttttaagttattttggtcacacataagtcctttacgtatgtaaac 3876938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 255 - 316
Target Start/End: Original strand, 9500904 - 9500965
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagt 316  Q
    ||||||||||||| |||| | ||||| ||||||| ||||||||||||||||||||| |||||    
T  9500904 gtcctttaagttttaggtctgtaacagattggtcctttaagttattttggtcacacttaagt 9500965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 255 - 316
Target Start/End: Complemental strand, 33847771 - 33847710
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagt 316  Q
    ||||||||||||||| |||| ||||| |||| || ||||||||||||||||||||| |||||    
T  33847771 gtcctttaagtttgatgtttgtaacatattgttcctttaagttattttggtcacacataagt 33847710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 44556524 - 44556597
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||||| |||||| ||| | |||||||||||||||| |||| ||||||| |||||  ||||||||||    
T  44556524 gtcctttaagtttaaggtttgtaatagattggtcatttaagttttttttgtcacacataagtcctttaagtttg 44556597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 333
Target Start/End: Original strand, 30265378 - 30265516
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcat 290  Q
    ||||||||| |||||| ||||||||||||||| ||  |||| ||   |||||| |||| ||  ||| |||||| |||| ||||| ||| | ||| |||||    
T  30265378 ggtcctttaagtttgaggtttgtaataaattggtccattaaatt---attttggtcacgcatcagttctttaa-tttggggtttctaatagattagtcat 30265473  T
Q  291 ttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||| |||| ||||||| |||||  |||||||||||||||    
T  30265474 ttaagttctttttgtcacacataagtgctttaagtttgtaaac 30265516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 31630409 - 31630357
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacac 310  Q
    ||||||||||||||||||||  | |||| ||||||||||||||||||||||||    
T  31630409 ctttaagtttgaggtttatagaagattgatcatttaagttattttggtcacac 31630357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 368 - 423
Target Start/End: Complemental strand, 14166077 - 14166022
Alignment:
Q  368 ttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaag 423  Q
    |||||||| |||||||||| | |||||||| ||||||||| |||||||||||||||    
T  14166077 ttttgtaacgtttggttaataaaatgactaaattgaaaacatttacaaacttaaag 14166022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 259 - 333
Target Start/End: Complemental strand, 11791873 - 11791799
Alignment:
Q  259 tttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||||| |||| ||| | ||  ||||||||||||||||||||||||| |||||  | |||||||||||||    
T  11791873 tttaagtttgaagtttgtaatagatatgtcatttaagttattttggtcacacataagtcctataagtttgtaaac 11791799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 258 - 332
Target Start/End: Original strand, 12612448 - 12612522
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    |||||||||| |||||| ||| | ||||||| ||||| |||||||| |||||| |||||  ||||||||||||||    
T  12612448 ctttaagtttaaggtttgtaatagattggtcttttaaattattttgatcacacataagtcatttaagtttgtaaa 12612522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 413 - 482
Target Start/End: Complemental strand, 9500977 - 9500908
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||| | ||||| |||||||||||||||||||||||| |||| | ||||| |||| ||| |||||    
T  9500977 caaacttaagggacttaagtgtgaccaaaataacttaaaggaccaatctgttacagacctaaaacttaaa 9500908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 425 - 486
Target Start/End: Original strand, 14166464 - 14166525
Alignment:
Q  425 acttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    ||||||||||||| |||||||||||||||| | || | |||||||| ||||| |||||||||    
T  14166464 acttatgtgtgacaaaaataacttaaaggacctatctattacaaacatcaaacttaaatgac 14166525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 418 - 491
Target Start/End: Complemental strand, 30265447 - 30265374
Alignment:
Q  418 ttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttata 491  Q
    |||||||||| ||| ||||||||||||| |||| ||| |||| | |||||||||||||| ||||| ||| ||||    
T  30265447 ttaaagaactgatgcgtgaccaaaataatttaatggaccaatttattacaaacctcaaacttaaaggacctata 30265374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 36694471 - 36694406
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaa-gaacttatgtgtgaccaaaataacttaaa 451  Q
    ||||| ||||| ||||||||  |||||||||||||| | |||||| ||||||||||||||||||||    
T  36694471 cagaaggactaaattgaaaatatttacaaacttaaaaggacttatatgtgaccaaaataacttaaa 36694406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 451
Target Start/End: Complemental strand, 11791463 - 11791411
Alignment:
Q  399 attgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaa 451  Q
    |||| |||| |||||||||||||| |||||| ||||||||||||||| |||||    
T  11791463 attggaaacgtttacaaacttaaataacttacgtgtgaccaaaataatttaaa 11791411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 451
Target Start/End: Complemental strand, 6694217 - 6694122
Alignment:
Q  357 cacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaact-tttacaaacttaaagaacttatgtgtgaccaaaataacttaaa 451  Q
    ||||||||  ||||| ||| ||||| ||||||||| ||||   ||||||| | ||||||||||||||  | |||||||||| ||||||||||||||    
T  6694217 cacatcattgtttttataacgtttgattaacagaaagactcatttgaaaaatctttacaaacttaaaagatttatgtgtgatcaaaataacttaaa 6694122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 543
Target Start/End: Original strand, 31630291 - 31630350
Alignment:
Q  484 gacttatatgtgactaaaataacttaaaaacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||||| |||||| |||||||||||||||| ||| |||||| ||| ||||| |||||||    
T  31630291 gacttatgtgtgaccaaaataacttaaaaaccaatctattactaacctcaaatttaaagg 31630350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 414 - 476
Target Start/End: Original strand, 12612669 - 12612731
Alignment:
Q  414 aaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaa 476  Q
    |||||||||||||||| || ||| |||||||| ||||| ||||||| | ||||||| ||||||    
T  12612669 aaacttaaagaacttaggtatgatcaaaataatttaaaagatcaatctattacaaatctcaaa 12612731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 427 - 481
Target Start/End: Original strand, 39442508 - 39442562
Alignment:
Q  427 ttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaa 481  Q
    |||||||| || || |||||||||||||||||| |||||||||||| ||| ||||    
T  39442508 ttatgtgtaacaaacataacttaaaggatcaatcttttacaaacctaaaacttaa 39442562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 410
Target Start/End: Original strand, 6694407 - 6694460
Alignment:
Q  357 cacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttt 410  Q
    ||||||||| ||||||||  |||||||||||| |||||||| ||||||| ||||    
T  6694407 cacatcatcgtttttgtatcgtttggttaacataatgactaaattgaaaccttt 6694460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 402 - 486
Target Start/End: Original strand, 12001798 - 12001880
Alignment:
Q  402 gaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    |||||| |||||||| |||||  |||| |||||||||||  |||||||||| || ||| | |||||||||| ||| |||||||||    
T  12001798 gaaaacgtttacaaatttaaaagacttgtgtgtgaccaa--taacttaaagaattaatttgttacaaacctgaaacttaaatgac 12001880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 2e-60; HSPs: 103)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 192 - 541
Target Start/End: Complemental strand, 40147300 - 40146955
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||||| |||||| |||| |||||||||| |||||||||| |||   ||| |||||||  ||| ||||||||||||||||| ||||||||||  | ||    
T  40147300 gtcctttaagtttgaggtttataataaattggtcatttaagtcgtt---ttggtcacacataagttctttaagtttgaggtttgtaacaaattgaccctt 40147204  T
Q  292 taagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaa 391  Q
    |||||||||||  |||||  |||||  ||||| ||||||||||       |||||||||||||  ||||||||| |||||||||||||||||||||| ||    
T  40147203 taagttatttttctcacatataagtcctttaaatttgtaaacattttcg-atttagtccttctgtcacatcatcgtttttgtaatgtttggttaacataa 40147105  T
Q  392 tgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttata 491  Q
     || || | ||||||| ||||||| ||||||| ||| |||||||||||||||||| | |||||||||| | |||||||||||||| || || |||||||     
T  40147104 ggaataaactgaaaacatttacaaccttaaaggactcatgtgtgaccaaaataacct-aaggatcaatctattacaaacctcaaacttcaaggacttatg 40147006  T
Q  492 tgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaa 541  Q
    |||||| |||||||||||||  |||||| ||| |||||| |||||||||||    
T  40147005 tgtgaccaaaataacttaaatgacaaatctatcacaaacctcaaacttaaa 40146955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 188 - 537
Target Start/End: Complemental strand, 12592532 - 12592187
Alignment:
Q  188 tcgggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggt 287  Q
    ||||||| |||| |||||| |||| ||||||||||||  ||||| ||   |||||  ||||| |  |||||||||||||||| |||| ||| | |||| |    
T  12592532 tcgggtcgtttaagtttgaggtttataataaattgattttttaattt---attttagtcacatattagtcctttaagtttgaagtttgtaatagattgat 12592436  T
Q  288 catttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaac 387  Q
    | |||||||||| ||||||| || |||||  |||||||||||||| |       |||||||||||||  ||||||||| |||||||||||||||||| ||    
T  12592435 cttttaagttatattggtcatacataagtcttttaagtttgtaaa-agttttcgatttagtccttctgtcacatcatcgtttttgtaatgtttggttgac 12592337  T
Q  388 agaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    |||||||||| ||||||||| |||||||||||| |  | ||||||||||||||||||||||||| ||||||| | |||||||  |||||   |||| |||    
T  12592336 agaatgactaaattgaaaacgtttacaaacttacaagatttatgtgtgaccaaaataacttaaatgatcaatctgttacaaatttcaaacacaaataact 12592237  T
Q  488 tatatgtgactaaaataacttaaaaacaaatttattacaaacgtcaaact 537  Q
    ||| | | || |||||||||||||||| ||| | |||||||| |||||||    
T  12592236 tatgtttaaccaaaataacttaaaaaccaatctgttacaaacctcaaact 12592187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 190 - 543
Target Start/End: Original strand, 41083051 - 41083390
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| |||||| |||||||| | ||||||||||||||||   |||||  ||||| |  |||||||||||||||| |||| ||||| |||||||     
T  41083051 gggtcctttaagtttgaggtttgtaacatattgatcatttaagtt---atttttgtcacatataagtcctttaagtttgaagtttgtaacatattggtcc 41083147  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacag 389  Q
    |||||||||||||| |||||| |||||  |||||||||||||||        ||||||||||| | |||||||||| |||||||||| |               
T  41083148 tttaagttattttgatcacacataagtcctttaagtttgtaaac-gtttcaaatttagtccttttgccacatcatcttttttgtaatat----------- 41083235  T
Q  390 aatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgactta 489  Q
    || ||||| || |||||| ||||||||||||||| |||||||||||||| |||||||||||| || |||| | |||| ||||||||| ||||||||| ||    
T  41083236 aaggactaaatcgaaaacgtttacaaacttaaaggacttatgtgtgaccgaaataacttaaaagaccaatctgttacgaacctcaaacttaaatgacata 41083335  T
Q  490 tatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    |||||||| |||||||||||||  || ||| | |||||||| |||||||||||||    
T  41083336 tatgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaagg 41083390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 193 - 543
Target Start/End: Original strand, 2469899 - 2470244
Alignment:
Q  193 tcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcattt 292  Q
    ||||||| |||||| |||||||||| |||| |  ||||||||   |||||| ||||||   ||||||||||||||||| ||| ||| | ||||||| |||    
T  2469899 tcctttaagtttgaggtttgtaatagattggttctttaagtt---attttggtcacacctaagtcctttaagtttgagctttgtaatatattggtccttt 2469995  T
Q  293 aagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaat 392  Q
    || |||||| |||||||  |||||  |||||||||||||||        |||||||| || | | |||||||||||||| ||| |||||||||||| ||     
T  2469996 aaattattt-ggtcacatataagtc-tttaagtttgtaaac-cttttcgatttagtcatttttcaacatcatcatttttttaacgtttggttaacataag 2470092  T
Q  393 gactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatat 492  Q
    ||||| || | |||  | |||| ||| |||  |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||    
T  2470093 gactaaatcggaaaggtatacatactaaaaagacttatgtgtgaccaaaataacttaaaggaccaatatattacaaacctcaaatttaaaggacttatat 2470192  T
Q  493 gtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||| |||||||||||||  || ||| |||||||||| | ||||| |||||    
T  2470193 gtgaccaaaataacttaaaggaccaatctattacaaaccttaaactgaaagg 2470244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 195 - 541
Target Start/End: Complemental strand, 2788229 - 2787889
Alignment:
Q  195 ctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaa 294  Q
    ||||| |||||| |||||||| ||||||||  ||||||||   |||||| |||||||  | |||||||||||| |||||| ||| |||||| || |||||    
T  2788229 ctttaagtttgaggtttgtaacaaattgatattttaagtt---attttggtcacacataaatcctttaagtttaaggtttgtaaaaaattgatcctttaa 2788133  T
Q  295 gttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatga 394  Q
    || |||||||||| |  |||||  || ||||| |||||||       ||||||| ||||| ||||||||||  ||||||| |||||||||||||||| ||    
T  2788132 gtcattttggtcagagataagtcctt-aagttggtaaacattttcg-atttagttcttctgccacatcatcggttttgtagtgtttggttaacagaaaga 2788035  T
Q  395 ctagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgt 494  Q
    ||| ||||||||| ||||||||||||||  |||||||||||||||||||||||||||  |  ||||| |||||||||| ||| ||||||||||||| ||     
T  2788034 cta-attgaaaacatttacaaacttaaatgacttatgtgtgaccaaaataacttaaa--acaaatatgttacaaaccttaaacttaaatgacttatgtgc 2787938  T
Q  495 gactaaaataact--taaaaacaaatttattacaaacgtcaaacttaaa 541  Q
     || |||||||||  |||| ||  || |||||||||| |||||||||||    
T  2787937 aaccaaaataacttataaagaccgatctattacaaacatcaaacttaaa 2787889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 192 - 511
Target Start/End: Complemental strand, 53863657 - 53863351
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtccttt-aagtttgaggtttataacaaattggtcat 290  Q
    |||||||| |||| |||||||||||| |||| || ||||||||   |||||  |||||||  |||||||| |||||||||| || ||||||||||||| |    
T  53863657 gtcctttaagtttcaagtttgtaatagattggtcgtttaagtt---attttagtcacacataagtccttttaagtttgagggttgtaacaaattggtcct 53863561  T
Q  291 ttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacaga 390  Q
    |||||||||||||||||  | |||||  |||||||||||||| |       ||||||||||||| ||||||| || ||||          |||||||| |    
T  53863560 ttaagttattttggtcatgcataagtcctttaagtttgtaaa-agttttcaatttagtccttctgccacatcgtcgtttt----------ggttaacata 53863472  T
Q  391 atgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttat 490  Q
    | ||||| ||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||| |||| | ||||||| ||| || |||||||||||||    
T  53863471 aagactaaattgaaatcttttacaaacttaaaggacttatgtgtgactaaaataacttaaaggaccaatctgttacaaatctcgaacttaaatgacttat 53863372  T
Q  491 atgtgactaaaataacttaaa 511  Q
     |||||  |||||||||||||    
T  53863371 gtgtgatcaaaataacttaaa 53863351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 387 - 565
Target Start/End: Original strand, 45038355 - 45038534
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    ||||||||||| || |||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||| |||    
T  45038355 cagaatgactaaatcgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggac 45038454  T
Q  487 ttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaaggttattcggtgtaacttagccta 565  Q
    |||| |||||| |||||||||||||  || ||| |||||||||| ||||||||||||| |  | ||||||| ||||||||    
T  45038455 ttatttgtgacaaaaataacttaaatgaccaatctattacaaacctcaaacttaaaggatcattggtgtaatttagccta 45038534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 192 - 512
Target Start/End: Complemental strand, 51950817 - 51950511
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||||| ||||||||||||||||| |||| || || |     |||||||| | ||||   ||||||||||||| |||||||| || ||||||||  ||    
T  51950817 gtcctttaagtttgaagtttgtaatagattggtccttaa-----ttattttggttacacttaagtcctttaagttcgaggtttacaataaattggttctt 51950723  T
Q  292 taagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaa 391  Q
    ||||||| |||||| | || |||||  ||||||||||||||||       |||||||| || |  ||||||||||||||||||| || | ||||| ||||    
T  51950722 taagttaatttggttatacataagtcctttaagtttgtaaacattttca-atttagtcattttgtcacatcatcatttttgtaacgtctcgttaatagaa 51950624  T
Q  392 tgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttata 491  Q
     ||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||| |  |||||||       ||||| || |||||    
T  51950623 ggactaaattgaaaacatttacaaacttaaaggacttatgtgtgaccaaaataacttaaaagatcaatctgctacaaac-------ttaaa-gatttata 51950532  T
Q  492 tgtgactaaaataacttaaaa 512  Q
    |||||||||||||||||||||    
T  51950531 tgtgactaaaataacttaaaa 51950511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 196 - 541
Target Start/End: Complemental strand, 25056230 - 25055884
Alignment:
Q  196 tttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggttt---ataacaaattggtcattt 292  Q
    |||| |||||| |||||||| |||||| || ||||||||   |||||| | | |||  |||| ||||||||||||||||   |||||| |||||||  ||    
T  25056230 tttaagtttgaggtttgtaacaaattggtcttttaagtt---attttggtgagacaaaagtcatttaagtttgaggtttgtaataacatattggtccctt 25056134  T
Q  293 aagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaat 392  Q
    ||||| ||||||||| |  |||||  |||||||||||||||        ||||||||||||| ||||| |||  |||||||||||||||||||||||||     
T  25056133 aagttcttttggtcatat-taagtcatttaagtttgtaaac-gttttcaatttagtccttctgccacaacatagtttttgtaatgtttggttaacagaag 25056036  T
Q  393 gactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaa--cctcaaatttaaatgacttat 490  Q
    ||||| || |||||| |||||| ||||||||  | |||||||||| |||||||||||| ||| |||| | |||||||  ||||||| ||||| || ||||    
T  25056035 gactaaatggaaaacatttacatacttaaaggtcatatgtgtgacaaaaataacttaatggaacaatctgttacaaaatcctcaaacttaaaggatttat 25055936  T
Q  491 atgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaa 541  Q
     ||| || |||||||||||||  |||||| |||||||||| |||||||||||    
T  25055935 gtgtcaccaaaataacttaaaggacaaatctattacaaacctcaaacttaaa 25055884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 235 - 541
Target Start/End: Original strand, 45787062 - 45787365
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
    ||||||||| | |||||  ||||| ||| ||||||||||| ||||| |||| |||||||| |||||||||| |||| ||||   ||||||||| ||||||    
T  45787062 gttattttggttacacagaagtcccttacgtttgaggtttgtaacagattgatcatttaacttattttggttacacataagacatttaagtttataaaca 45787161  T
Q  335 nnnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgt 434  Q
           ||||||| |||||  ||||||||  |||||||||| ||||||||| |||||||||| ||||||||| ||| |||||||||| |||||||||||    
T  45787162 ttttcg-atttagttcttctgtcacatcattgtttttgtaatatttggttaaaagaatgactaaattgaaaacgtttgcaaacttaaaaaacttatgtgt 45787260  T
Q  435 gaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataactt-aaaaacaaatttattacaaacgtca 533  Q
    || ||||||||||||||  |  ||| | ||||||||||  || ||||| ||  ||| |||||| |||||||||| |||||  |||||||||||||| |||    
T  45787261 gatcaaaataacttaaaaaactaatttattacaaacct--aacttaaa-gaactatgtgtgaccaaaataacttaaaaaatcaatttattacaaacctca 45787357  T
Q  534 aacttaaa 541  Q
    ||||||||    
T  45787358 aacttaaa 45787365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 254 - 543
Target Start/End: Complemental strand, 11884894 - 11884616
Alignment:
Q  254 agtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttc 353  Q
    |||||||||||||| | |||| ||||| ||||||| ||||| ||| ||||||||||  |||||| ||||||||||||||         ||||||||||||    
T  11884894 agtcctttaagttttaagtttgtaacagattggtcctttaaattaatttggtcacaaataagttctttaagtttgtaaa--tgtttcgatttagtccttc 11884797  T
Q  354 taccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaagg 453  Q
    ||||| ||||||           |||||||||| |||| ||||| || |||||  |||||||||||||||||||||  |||||| ||||||| || ||||    
T  11884796 taccatatcatc-----------gtttggttaatagaaggactaaatcgaaaatgtttacaaacttaaagaacttagttgtgactaaaataaattgaagg 11884708  T
Q  454 atcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaa--acaaatttattacaaacgtcaaacttaaagg 543  Q
    | |||| | |||||||||||||| ||||| ||||||| |||||| ||||||||||||||  |  ||||| |||||||| ||||| |||||||    
T  11884707 accaatctgttacaaacctcaaacttaaaggacttatgtgtgacaaaaataacttaaaaggattaatttgttacaaacctcaaatttaaagg 11884616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 387 - 543
Target Start/End: Original strand, 53863497 - 53863655
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaa-tttaaatga 485  Q
    ||||| ||||| ||||||||||||||||||||||||| |||||||  ||||||||||||||||||||| |||| | |||||| ||||||| || ||| ||    
T  53863497 cagaaggactaaattgaaaacttttacaaacttaaaggacttatgcatgaccaaaataacttaaaggaccaatttgttacaaccctcaaacttaaaagga 53863596  T
Q  486 cttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||| ||||||||||||||||||||  || ||| |||||||||| | |||||||||||    
T  53863597 cttatgtgtgactaaaataacttaaacgaccaatctattacaaacttgaaacttaaagg 53863655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 387 - 540
Target Start/End: Complemental strand, 12498778 - 12498623
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    ||||| ||||| |||||||  |||||||||||||||| | ||||||||||||||||||||||||| ||||||||| || ||||||| ||| ||||| |||    
T  12498778 cagaaggactaaattgaaattttttacaaacttaaaggatttatgtgtgaccaaaataacttaaaagatcaatatattgcaaaccttaaacttaaaagac 12498679  T
Q  487 ttatatgtgactaaaataacttaaaa--acaaatttattacaaacgtcaaacttaa 540  Q
    |||| |||||| ||||||||||||||  || ||| |||||||||| ||||| ||||    
T  12498678 ttatgtgtgacaaaaataacttaaaaggaccaatctattacaaacctcaaatttaa 12498623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 386 - 541
Target Start/End: Original strand, 12592368 - 12592524
Alignment:
Q  386 acagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatga 485  Q
    |||||| ||||| || |||||||||||||||||||||  |||||||| ||||||| |||||||||| ||||||| | |||||||| ||||| ||||| ||    
T  12592368 acagaaggactaaatcgaaaacttttacaaacttaaaagacttatgtatgaccaatataacttaaaagatcaatctattacaaacttcaaacttaaagga 12592467  T
Q  486 cttatatgtgactaaaataactt-aaaaacaaatttattacaaacgtcaaacttaaa 541  Q
    || ||||||||||||||||| || |||||  ||||||||| |||| |||||||||||    
T  12592468 ctaatatgtgactaaaataaattaaaaaatcaatttattataaacctcaaacttaaa 12592524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 404 - 543
Target Start/End: Complemental strand, 41083195 - 41083055
Alignment:
Q  404 aaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaat 503  Q
    |||| ||||||||||||||| |||||||||||| ||||||||||||||||| |||||| |||||||| ||||| ||||| |||||||||||||| |||||    
T  41083195 aaacgtttacaaacttaaaggacttatgtgtgatcaaaataacttaaaggaccaatatgttacaaacttcaaacttaaaggacttatatgtgacaaaaat 41083096  T
Q  504 aacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||||||  |  ||| | |||||||| |||||||||||||    
T  41083095 aacttaaatgatcaatatgttacaaacctcaaacttaaagg 41083055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 235 - 543
Target Start/End: Original strand, 12498659 - 12498956
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
    ||||||||  |||||||  |||| ||||||||| ||||||  || | |||| || ||||||||||||||||||||| ||| |  |||||||||||||| |    
T  12498659 gttatttttgtcacacataagtcttttaagtttaaggtttgcaatatattgatcttttaagttattttggtcacacataaatcctttaagtttgtaaa-a 12498757  T
Q  335 nnnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgt 434  Q
           ||||||||||||| |||||||||| ||||||||||           |||| ||||| || |||||| |||||||| |||||  ||||||||||    
T  12498758 aatttcaatttagtccttctgccacatcatcttttttgtaat-----------agaaggactaaatcgaaaacgtttacaaatttaaaagacttatgtgt 12498846  T
Q  435 gaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtca 533  Q
    |||| |||||| ||||||||| | | | ||||||| |||||| ||||| ||||||| ||||| ||||||||||||||  |  ||| |||||||||| |||    
T  12498847 gaccgaaataatttaaaggattagtctgttacaaatctcaaacttaaaggacttatgtgtgattaaaataacttaaatgatcaatctattacaaacctca 12498946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 259 - 483
Target Start/End: Complemental strand, 41519426 - 41519203
Alignment:
Q  259 tttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctacca 358  Q
    |||||| ||||||||| ||||| ||| ||||||||||| ||||| ||||||| |||||  ||||||||||||||||       ||||| ||||| |  ||    
T  41519426 tttaagattgaggtttttaacagattagtcatttaagtcattttagtcacacataagtcttttaagtttgtaaacatttttg-atttaatccttttgaca 41519328  T
Q  359 catcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaa 458  Q
    | | ||| |||||||||||||||||||||| || ||| | ||||||||| ||||||||||||||| |||||| | |||| ||||||||||| | ||  ||    
T  41519327 cttaatcgtttttgtaatgtttggttaacataaagaccaaattgaaaacgtttacaaacttaaaggacttatttttgactaaaataacttagatgacaaa 41519228  T
Q  459 tattttacaaacctcaaatttaaat 483  Q
    | | ||| |||||||||||||||||    
T  41519227 tctattagaaacctcaaatttaaat 41519203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 253 - 541
Target Start/End: Original strand, 50290180 - 50290472
Alignment:
Q  253 gagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgttt-aagtttgtaaacannnnnnnatttagtcct 351  Q
    |||||||||||||||||||||| | ||||||||||  ||||||||||||||||||||| ||| |  ||| |||||| |||| |       |||||||| |    
T  50290180 gagtcctttaagtttgaggtttgttacaaattggt--tttaagttattttggtcacacataaatacttttaagtttttaaatatttttg-atttagtcat 50290276  T
Q  352 tctaccacatcatcatttttgtaatgtttggttaacagaatgactagat-------tgaaaacttttacaaacttaaagaacttatgtgtgaccaaaata 444  Q
    |||  |||||||||||||||||||| ||||||||||| ||||| || ||       ||||||| |||||||||||||| |||| ||| ||||||||||||    
T  50290277 tctgtcacatcatcatttttgtaatatttggttaacataatgaataaataaaagtttgaaaacgtttacaaacttaaa-aactcatgcgtgaccaaaata 50290375  T
Q  445 acttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaa 541  Q
    | || ||||| ||||  |  |||||||||||| |||||  |||||| |||||| |||||||||||||  |  |||||||||||||| |||||||||||    
T  50290376 atttgaaggaccaatcatc-acaaacctcaaacttaaaaaacttatgtgtgaccaaaataacttaaatgatcaatttattacaaacctcaaacttaaa 50290472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 342 - 543
Target Start/End: Original strand, 55617486 - 55617686
Alignment:
Q  342 atttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaa 441  Q
    |||||||| ||||  ||||||||| ||||||||||||||  |||||| || ||||| ||||||||| ||||||||||||||  ||||||||||||| |||    
T  55617486 atttagtcattctgacacatcatcgtttttgtaatgtttaattaacaaaaggactaaattgaaaacatttacaaacttaaa-cacttatgtgtgactaaa 55617584  T
Q  442 ataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaa 540  Q
    |||||||||| ||  ||||| || ||||||||||| ||||| | ||||  ||| || ||||||||||||| ||| ||| |||||||||| ||||| ||||    
T  55617585 ataacttaaaagacaaatatgttgcaaacctcaaacttaaa-ggcttacgtgttaccaaaataacttaaagaactaatctattacaaacctcaaatttaa 55617683  T
Q  541 agg 543  Q
    |||    
T  55617684 agg 55617686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 342 - 543
Target Start/End: Original strand, 55624790 - 55624990
Alignment:
Q  342 atttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaa 441  Q
    |||||||| ||||  ||||||||| ||||||||||||||  |||||| || ||||| ||||||||| ||||||||||||||  ||||||||||||| |||    
T  55624790 atttagtcattctgacacatcatcgtttttgtaatgtttaattaacaaaaggactaaattgaaaacatttacaaacttaaa-cacttatgtgtgactaaa 55624888  T
Q  442 ataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaa 540  Q
    |||||||||| ||  ||||| || ||||||||||| ||||| | ||||  ||| || ||||||||||||| ||| ||| |||||||||| ||||| ||||    
T  55624889 ataacttaaaagacaaatatgttgcaaacctcaaacttaaa-ggcttacgtgttaccaaaataacttaaagaactaatctattacaaacctcaaatttaa 55624987  T
Q  541 agg 543  Q
    |||    
T  55624988 agg 55624990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 356 - 482
Target Start/End: Complemental strand, 17232117 - 17231991
Alignment:
Q  356 ccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggat 455  Q
    |||||||||| |||||||||||||||||||||||||  |||| ||||||||| ||||||||||||||  |||||||||||| |||||||||||||| ||     
T  17232117 ccacatcatcgtttttgtaatgtttggttaacagaagaactaaattgaaaacgtttacaaacttaaaagacttatgtgtgatcaaaataacttaaaagac 17232018  T
Q  456 caatattttacaaacctcaaatttaaa 482  Q
      || | |||||||||||||| |||||    
T  17232017 ttatctgttacaaacctcaaacttaaa 17231991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 193 - 333
Target Start/End: Complemental strand, 45038513 - 45038376
Alignment:
Q  193 tcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcattt 292  Q
    ||||||| |||||| |||||||||| |||| |||||||||||   |||||  ||||| |  ||||||||||||||||||||| ||||| ||||||| |||    
T  45038513 tcctttaagtttgaggtttgtaatagattggtcatttaagtt---atttttgtcacaaataagtcctttaagtttgaggtttgtaacagattggtccttt 45038417  T
Q  293 aagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    |||||||||||||||||| |||||  |||||||||||||||    
T  45038416 aagttattttggtcacacataagtcctttaagtttgtaaac 45038376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 254 - 480
Target Start/End: Original strand, 40395157 - 40395371
Alignment:
Q  254 agtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttc 353  Q
    ||||||||||||||||||||| ||||| ||| ||  ||||||||||||||||||||| ||| |  ||||||||||||| |        |||| |||||||    
T  40395157 agtcctttaagtttgaggtttgtaacatattagttctttaagttattttggtcacacataaatcttttaagtttgtaagc-gttttcaattttgtccttc 40395255  T
Q  354 taccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaagg 453  Q
    |||||||||||| ||||||||||           |||| ||||| || |||||| |||||||| |||||| |||||||||||||  ||||||||||||||    
T  40395256 taccacatcatcttttttgtaat-----------agaaggactaaatcgaaaacgtttacaaatttaaaggacttatgtgtgacagaaataacttaaagg 40395344  T
Q  454 atcaatattttacaaacctcaaattta 480  Q
    |  ||| | ||||||||||||||||||    
T  40395345 actaatctgttacaaacctcaaattta 40395371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 390 - 543
Target Start/End: Complemental strand, 2470052 - 2469900
Alignment:
Q  390 aatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgactta 489  Q
    |||||||| || |||||  |||||||||||||||| ||||| |||||||||| ||| |||||||| |||||| ||||||| |||||| ||||| ||||||    
T  2470052 aatgactaaatcgaaaaggtttacaaacttaaaga-cttatatgtgaccaaa-taatttaaaggaccaatatattacaaagctcaaacttaaaggactta 2469955  T
Q  490 tatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
      |||||| ||||||||||||| ||| ||| |||||||||| |||||||||||||    
T  2469954 ggtgtgaccaaaataacttaaagaaccaatctattacaaacctcaaacttaaagg 2469900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 431 - 543
Target Start/End: Original strand, 21321993 - 21322106
Alignment:
Q  431 gtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaa-acaaatttattacaaac 529  Q
    |||| |||||||||| |||||||| |||| |||||||||||||||| ||||| |||||||||||||| |||||||||||||| | |||| | ||||||||    
T  21321993 gtgtaaccaaaataagttaaaggaccaatcttttacaaacctcaaacttaaaggacttatatgtgaccaaaataacttaaaagaaaaatgtgttacaaac 21322092  T
Q  530 gtcaaacttaaagg 543  Q
     |||||||||||||    
T  21322093 ctcaaacttaaagg 21322106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 399 - 511
Target Start/End: Complemental strand, 40395245 - 40395133
Alignment:
Q  399 attgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgact 498  Q
    |||||||||  |||||||||||||  | |||||||||||||||||||||||||| |  ||||| |||||||||||||| ||||| ||||||||||||||     
T  40395245 attgaaaacgcttacaaacttaaaagatttatgtgtgaccaaaataacttaaagaactaatatgttacaaacctcaaacttaaaggacttatatgtgaca 40395146  T
Q  499 aaaataacttaaa 511  Q
    |||||||| ||||    
T  40395145 aaaataacctaaa 40395133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 393 - 543
Target Start/End: Original strand, 7246209 - 7246360
Alignment:
Q  393 gactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatat 492  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||  |||||||  ||||| | |||| | || |||| |||||| ||||| ||||||| |    
T  7246209 gactaaattgaaaacttttacaaacttaaagtacttatgtgtgataaaaataaactaaagaaccaatctattccaaatctcaaacttaaaggacttatgt 7246308  T
Q  493 gtgactaaaataacttaaaa-acaaatttattacaaacgtcaaacttaaagg 543  Q
     |||| |||||||||||||| || ||| | |||||||| |||||||||||||    
T  7246309 atgaccaaaataacttaaaagaccaatatgttacaaacctcaaacttaaagg 7246360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 386 - 576
Target Start/End: Original strand, 40147140 - 40147331
Alignment:
Q  386 acagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatga 485  Q
    |||||| ||||| || |||||  |||||||| |||||| |||||| |||||  ||||||||||||||| ||||| | |||||||||||||| |||||  |    
T  40147140 acagaaggactaaatcgaaaatgtttacaaatttaaaggacttatatgtgagaaaaataacttaaagggtcaatttgttacaaacctcaaacttaaagaa 40147239  T
Q  486 cttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaaggttattcggtgtaacttagcctaaaaaataatac 576  Q
    ||||| |||||| ||||  |||||||  || ||||||||| |||| |||||||||||||    ||||||||| ||| |||||| ||||||||    
T  40147240 cttatgtgtgaccaaaacgacttaaatgaccaatttattataaacctcaaacttaaaggactatcggtgtaatttaacctaaataataatac 40147331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 50 - 160
Target Start/End: Original strand, 46672761 - 46672872
Alignment:
Q  50 ggacacaattaataagtaatcataatctgcaataaatgatatttatcatatacctttaaactattataggtgtatatacctgtt-aaaaataggtaataa 148  Q
    ||||||| || | |||| |||||||| ||||  |||| |||||||||||||||||||||||||||||||||||||||  || || |||||||||||||||    
T  46672761 ggacacactttacaagttatcataatttgcacaaaataatatttatcatatacctttaaactattataggtgtatatgtctattaaaaaataggtaataa 46672860  T
Q  149 tctggtgtggca 160  Q
    ||||||||||||    
T  46672861 tctggtgtggca 46672872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 425 - 542
Target Start/End: Original strand, 2788111 - 2788229
Alignment:
Q  425 acttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaa-acaaatttatt 523  Q
    |||||| | |||||||||| ||||||||||||||| |||||||||||| ||| ||||| || |||| |||||| |||||||||||||| |  ||||| ||    
T  2788111 acttatctctgaccaaaatgacttaaaggatcaattttttacaaaccttaaacttaaaggatttatgtgtgaccaaaataacttaaaatatcaatttgtt 2788210  T
Q  524 acaaacgtcaaacttaaag 542  Q
    |||||| ||||||||||||    
T  2788211 acaaacctcaaacttaaag 2788229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 190 - 496
Target Start/End: Complemental strand, 9999628 - 9999338
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||| ||||| ||| ||||||||||||| |||| |||||||||||   |||||| |||||||  |||  |||||||||||||||| ||||| ||||||||    
T  9999628 gggttctttaagttagaagtttgtaatagattggtcatttaagtt---attttggtcacacattagt--tttaagtttgaggtttgtaacagattggtca 9999534  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacag 389  Q
    ||||||||||||| ||||||  |||||  ||||| |||||||| |       ||||||| ||||   ||||||||| |          | | ||||||||    
T  9999533 tttaagttatttttgtcacatataagtcatttaactttgtaaa-agttttcaatttagtacttcggtcacatcatcgt----------tgtcgttaacag 9999445  T
Q  390 aatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaa-tttaaatgactt 488  Q
    || || || ||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||  | |||||| ||| |||| ||||| |||||| |||||    
T  9999444 aaagattaaattcaaaacgtttacaaacttaaagaatttatgtgtgaccaatataacttaaa-aaccaatatgttagaaacatcaaactttaaaggactt 9999346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 394 - 542
Target Start/End: Original strand, 9999476 - 9999623
Alignment:
Q  394 actagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatg 493  Q
    |||| |||||||||||||||||| |||||  |||||| |||||| ||||||||||||| || |||| | |||||||||||||| |||||  ||| || ||    
T  9999476 actaaattgaaaacttttacaaagttaaatgacttatatgtgacaaaaataacttaaatgaccaatctgttacaaacctcaaacttaaa--actaatgtg 9999573  T
Q  494 tgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaag 542  Q
    |||| |||||||||||||  || ||| |||||||||| || |||||||||    
T  9999574 tgaccaaaataacttaaatgaccaatctattacaaacttctaacttaaag 9999623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 195 - 332
Target Start/End: Original strand, 26782291 - 26782428
Alignment:
Q  195 ctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagt-cctttaagtttgaggtttataacaaattggtcattta 293  Q
    ||||| |||||| |||||||  | ||||||| |||||||| ||||||| ||||||||  ||| |||||||||||||  ||| ||||| ||||||| ||||    
T  26782291 ctttaagtttgacgtttgtagcatattgatcctttaagttattattttaatcacacataagttcctttaagtttgatatttgtaacagattggtccttta 26782390  T
Q  294 agttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    ||||||||||||||||| |||||  ||||||||||||||    
T  26782391 agttattttggtcacac-taagtcttttaagtttgtaaa 26782428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 254 - 328
Target Start/End: Complemental strand, 40147301 - 40147227
Alignment:
Q  254 agtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| |||||| ||||||||||    
T  40147301 agtcctttaagtttgaggtttataataaattggtcatttaagtcgttttggtcacacataagttctttaagtttg 40147227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 234 - 412
Target Start/End: Complemental strand, 24369363 - 24369186
Alignment:
Q  234 tgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    |||||||||| ||||||   | ||||||||||||||||||| ||| | ||| ||| ||||||||||||| ||||||| |||||  ||||||||||||||     
T  24369363 tgttattttggtcacacctaattcctttaagtttgaggtttgtaatagatttgtcctttaagttattttagtcacacctaagtcctttaagtttgtaaa- 24369265  T
Q  334 annnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaactttta 412  Q
            |||||||| || | |||||||||||| ||||||| |||||||||||| || ||||| ||||||||| ||||    
T  24369264 tgttttcgatttagtctttttgccacatcatcatgtttgtaacgtttggttaacaaaaggactaaattgaaaacgttta 24369186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 26782478 - 26782567
Alignment:
Q  393 gactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||| ||||||||||||||||||||||||  |||||| |||||| |||||||||||||  |||||||| |||||||||||||| |||||    
T  26782478 gactaaattgaaaacttttacaaacttaaaagacttatatgtgacaaaaataacttaaaaaatcaatatattacaaacctcaaacttaaa 26782567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 378 - 505
Target Start/End: Complemental strand, 26782459 - 26782332
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaat 477  Q
    ||||||||||| || ||||| |||||||| |||||||||||||||  ||||| |||||||||||||||||||||||| |||| | |||||||  |||||     
T  26782459 tttggttaacataaggactaaattgaaaatttttacaaacttaaaagactta-gtgtgaccaaaataacttaaaggaccaatctgttacaaatatcaaac 26782361  T
Q  478 ttaaatg-acttatatgtgactaaaataa 505  Q
    ||||| | |||||| ||||| ||||||||    
T  26782360 ttaaaggaacttatgtgtgattaaaataa 26782332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 327
Target Start/End: Original strand, 7245989 - 7246123
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| |||||| |||||||| |  |||||| ||||||||   |||||| ||| |||  ||||||||||||||||  ||| |||||||||||||     
T  7245989 gggtcctttaagtttgacgtttgtaacaggttgatcctttaagtt---attttggtcagacataagtcctttaagtttgatatttgtaacaaattggtcg 7246085  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagttt 327  Q
    |||||||||||||||| |||| |||||  |||||||||    
T  7246086 tttaagttattttggttacacataagtcctttaagttt 7246123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 192 - 333
Target Start/End: Complemental strand, 12498958 - 12498820
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||||| |||||| |||||||||| ||||||||||||||||   ||||| ||||||||  ||||||||||||||||| ||| ||||| | |  || ||    
T  12498958 gtcctttaagtttgaggtttgtaatagattgatcatttaagtt---attttaatcacacataagtcctttaagtttgagatttgtaacagactaatcctt 12498862  T
Q  292 taagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||| |||||| |||||||| |||||  ||||| |||||||||    
T  12498861 taaattatttcggtcacacataagtcttttaaatttgtaaac 12498820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 393 - 511
Target Start/End: Original strand, 24369249 - 24369367
Alignment:
Q  393 gactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatat 492  Q
    ||||| || |||||| ||||||||||||||| ||||| ||||||| ||||||||||||||||  ||| | |||||||||||||| ||||| || |||  |    
T  24369249 gactaaatcgaaaacatttacaaacttaaaggacttaggtgtgactaaaataacttaaaggacaaatctattacaaacctcaaacttaaaggaattaggt 24369348  T
Q  493 gtgactaaaataacttaaa 511  Q
    ||||| |||||||| ||||    
T  24369349 gtgaccaaaataacataaa 24369367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 400 - 541
Target Start/End: Complemental strand, 46196255 - 46196113
Alignment:
Q  400 ttgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgacta 499  Q
    |||||||| |||||||| |||||| |||||| || |  | ||||| ||||||||| |||| | |||||||| ||||| ||||| ||||||| |||||| |    
T  46196255 ttgaaaacgtttacaaatttaaaggacttatttgagctccaaatatcttaaaggaccaatttgttacaaacgtcaaacttaaaggacttatttgtgacca 46196156  T
Q  500 aaataacttaaa-aacaaatttattacaaacgtcaaacttaaa 541  Q
    ||||||||||||  ||| || |||||||||||| |||||||||    
T  46196155 aaataacttaaaggacatatctattacaaacgtgaaacttaaa 46196113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 190 - 334
Target Start/End: Original strand, 11884612 - 11884754
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    ||||||||||  ||||| |||||||| ||||| ||| ||| |   ||||||||  |||||||  ||||||||||||||||||||| ||||| |||||||     
T  11884612 gggtcctttaaatttgaggtttgtaacaaattaatccttttaa--gttatttttgtcacacataagtcctttaagtttgaggtttgtaacagattggtcc 11884709  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
    || || ||||||| ||||||  |||||| ||||||||||||||||    
T  11884710 ttcaatttattttagtcacaactaagttctttaagtttgtaaaca 11884754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 190 - 333
Target Start/End: Complemental strand, 41083394 - 41083254
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| |||||| |||||||| | |||| || ||||||||   |||||| ||||| |   ||| |||||||||||||||  ||||| |||||||     
T  41083394 gggtcctttaagtttgaggtttgtaacagattggtcctttaagtt---attttggtcacatatatgtcatttaagtttgaggttcgtaacagattggtct 41083298  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    |||||||||||| |||||||| |||||  |||||||||||||||    
T  41083297 tttaagttatttcggtcacacataagtcctttaagtttgtaaac 41083254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 404 - 513
Target Start/End: Original strand, 44057260 - 44057368
Alignment:
Q  404 aaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaat 503  Q
    |||| ||||||| |||||||| ||||||| |||| ||||||||||||| || |||| | ||||||| |||||| ||||||||||||| ||| || |||||    
T  44057260 aaacgtttacaagcttaaaga-cttatgtatgactaaaataacttaaatgaccaatttattacaaatctcaaacttaaatgacttatgtgtaaccaaaat 44057358  T
Q  504 aacttaaaaa 513  Q
    ||||||||||    
T  44057359 aacttaaaaa 44057368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 259 - 328
Target Start/End: Complemental strand, 50290472 - 50290403
Alignment:
Q  259 tttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||||||||||||| ||| |||||| |||||||||||||||||||||||| |||||| ||||||||||    
T  50290472 tttaagtttgaggtttgtaataaattgatcatttaagttattttggtcacacataagttttttaagtttg 50290403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 53863356 - 53863453
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    |||||||||||||||||  |||| |||||||| ||| ||| ||||| ||||||| ||||||||||||| ||||||| |||||  ||||||||||||||    
T  53863356 gttattttgatcacacataagtcatttaagttcgagatttgtaacagattggtcctttaagttattttagtcacacataagtcctttaagtttgtaaa 53863453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 387 - 541
Target Start/End: Original strand, 25056073 - 25056230
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatatttta---caaacctcaaatttaaat 483  Q
    ||||| ||||| ||||||||| ||||||||||||||  |||||  | ||||||||| ||||||| ||| |||||| |||   ||||||||||| ||||||    
T  25056073 cagaaggactaaattgaaaacgtttacaaacttaaatgacttaa-tatgaccaaaagaacttaagggaccaatatgttattacaaacctcaaacttaaat 25056171  T
Q  484 gacttatatgtgactaaaataacttaaaa-acaaatttattacaaacgtcaaacttaaa 541  Q
    ||||| | | | || |||||||||||||| || ||||| |||||||| |||||||||||    
T  25056172 gacttttgtctcaccaaaataacttaaaagaccaatttgttacaaacctcaaacttaaa 25056230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 414 - 543
Target Start/End: Complemental strand, 7246123 - 7245993
Alignment:
Q  414 aaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-a 512  Q
    |||||||||| |||||||||| |||||||||||||||| || |||| | |||||||  ||||| ||||| ||||||| | |||| |||||||||||||      
T  7246123 aaacttaaaggacttatgtgtaaccaaaataacttaaacgaccaatttgttacaaatatcaaacttaaaggacttatgtctgaccaaaataacttaaagg 7246024  T
Q  513 acaaatttattacaaacgtcaaacttaaagg 543  Q
    |  ||  | ||||||||||||||||||||||    
T  7246023 atcaacctgttacaaacgtcaaacttaaagg 7245993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 390 - 543
Target Start/End: Original strand, 51950663 - 51950815
Alignment:
Q  390 aatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgactta 489  Q
    |||||||| ||||||||  ||||||||||||||| |||||||| | |||||| |||||||||| | |||| | ||  ||||||| || ||||| ||||||    
T  51950663 aatgactaaattgaaaatgtttacaaacttaaaggacttatgtataaccaaattaacttaaagaaccaatttattgtaaacctcgaacttaaaggactta 51950762  T
Q  490 tatgtgactaaaataacttaaaaacaaatttattacaaacgtcaaacttaaagg 543  Q
      ||| || ||||||| ||||  || ||| |||||||||| |||||||||||||    
T  51950763 agtgtaaccaaaataa-ttaaggaccaatctattacaaacttcaaacttaaagg 51950815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 2470248 - 2470125
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||  |||| | |||||||||| |||| || ||||||||   |||||| ||||| |  |||||||||| |||||||||| ||| | |||||||     
T  2470248 gggtcctttcagtttaaggtttgtaatagattggtcctttaagtt---attttggtcacatataagtcctttaaatttgaggtttgtaatatattggtcc 2470152  T
Q  290 tttaagttattttggtcacacgtaagt 316  Q
    ||||||||||||||||||||| |||||    
T  2470151 tttaagttattttggtcacacataagt 2470125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 7246361 - 7246289
Alignment:
Q  256 tcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||||||||||| || |||||  ||||||||||    
T  7246361 tcctttaagtttgaggtttgtaacatattggtcttttaagttattttggtcatacataagtcctttaagtttg 7246289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 413 - 542
Target Start/End: Complemental strand, 45038318 - 45038191
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaa 512  Q
    ||||||||||| |||||||||||||| ||||||||||| ||| |||| | ||| |||||| ||| || |   ||||||| ||||| ||||||||||||||    
T  45038318 caaacttaaaggacttatgtgtgaccgaaataacttaacggaccaatctgttataaaccttaaacttga---acttatacgtgaccaaaataacttaaaa 45038222  T
Q  513 -acaaatttattacaaacgtcaaacttaaag 542  Q
     |  ||| |||||||||| ||||||||||||    
T  45038221 gatcaatatattacaaacctcaaacttaaag 45038191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 382 - 509
Target Start/End: Original strand, 46196292 - 46196419
Alignment:
Q  382 gttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaa 481  Q
    |||||||||| ||||| ||||||||  ||| ||||||||||  |||||| || | | |||||||||||| ||  |||| | |||||||||||||| ||||    
T  46196292 gttaacagaaggactaaattgaaaatgtttgcaaacttaaaatacttatttgcgcctaaaataacttaatggtccaatctgttacaaacctcaaacttaa 46196391  T
Q  482 atgacttatatgtgactaaaataactta 509  Q
    | ||||||| | |||| |||||||||||    
T  46196392 aggacttatgtatgacaaaaataactta 46196419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 490
Target Start/End: Original strand, 11884811 - 11884897
Alignment:
Q  404 aaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttat 490  Q
    |||| |||||||||||||||||||||| |||||||||| ||| |||||||| |||| | |||||||| | ||| ||||| |||||||    
T  11884811 aaacatttacaaacttaaagaacttatttgtgaccaaattaatttaaaggaccaatctgttacaaacttaaaacttaaaggacttat 11884897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 413 - 487
Target Start/End: Original strand, 12498885 - 12498959
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    ||||||||||| ||||||||||||  ||||||||||||| ||||||| | |||||||||||||| ||||| ||||    
T  12498885 caaacttaaaggacttatgtgtgattaaaataacttaaatgatcaatctattacaaacctcaaacttaaaggact 12498959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 413 - 482
Target Start/End: Complemental strand, 7246064 - 7245995
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||  | |||||||| ||||| |||||    
T  7246064 caaacttaaaggacttatgtctgaccaaaataacttaaaggatcaacctgttacaaacgtcaaacttaaa 7245995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 388 - 543
Target Start/End: Original strand, 24684228 - 24684381
Alignment:
Q  388 agaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    |||| ||||| || |||||| |||| |||||||||| |||||||||||||  ||||||||||||  | |||| | |||||||||||||| |||||  |||    
T  24684228 agaaagactaaatcgaaaacgtttataaacttaaaggacttatgtgtgactgaaataacttaaa--accaatctgttacaaacctcaaacttaaagaact 24684325  T
Q  488 tatatgtgactaaaataacttaaaa-acaaatttattacaaacgtcaaacttaaagg 543  Q
    ||  ||| | | ||||||||||||| || ||| ||||| |||| |||||||||||||    
T  24684326 tacgtgt-aatcaaataacttaaaagaccaatctattataaacctcaaacttaaagg 24684381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 24684383 - 24684311
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||||||||||||||||||||| | ||||||| ||||||||| |||| | ||||||||||| ||||||||||    
T  24684383 gtcctttaagtttgaggtttataatagattggtcttttaagtta-tttgattacacgtaagttctttaagtttg 24684311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 414 - 482
Target Start/End: Original strand, 2788160 - 2788228
Alignment:
Q  414 aaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||||||| | |||||||||||||||||||||||||  |||||| | |||||||||||||| |||||    
T  2788160 aaacttaaaggatttatgtgtgaccaaaataacttaaaatatcaatttgttacaaacctcaaacttaaa 2788228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 192 - 314
Target Start/End: Complemental strand, 21322108 - 21321989
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||||| |||||| |||||||| | |||  || ||||||||   |||||| ||||| |  ||||||||||||||||||||| ||| | ||||||| ||    
T  21322108 gtcctttaagtttgaggtttgtaacacatttttcttttaagtt---attttggtcacatataagtcctttaagtttgaggtttgtaaaagattggtcctt 21322012  T
Q  292 taagttattttggtcacacgtaa 314  Q
    ||| |||||||||| ||||||||    
T  21322011 taacttattttggttacacgtaa 21321989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 25056236 - 25056184
Alignment:
Q  253 gagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggt 305  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  25056236 gagtcttttaagtttgaggtttgtaacaaattggtcttttaagttattttggt 25056184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 196 - 333
Target Start/End: Complemental strand, 45787365 - 45787234
Alignment:
Q  196 tttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaag 295  Q
    |||| |||||| |||||||||||||||||  ||||||||   |||||| |||||||  ||| |||||||||  |||||| ||| ||||| ||  ||||||    
T  45787365 tttaagtttgaggtttgtaataaattgattttttaagtt---attttggtcacacat-agttctttaagtt--aggtttgtaataaattagttttttaag 45787272  T
Q  296 ttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    |||||||| |||||| |||||| |||||||||| ||||    
T  45787271 ttattttgatcacacataagttttttaagtttgcaaac 45787234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 415 - 483
Target Start/End: Original strand, 45787299 - 45787366
Alignment:
Q  415 aacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaat 483  Q
    ||||||||||||| |||||||||||||||||||||||  |||||| | |||||||||||||| ||||||    
T  45787299 aacttaaagaact-atgtgtgaccaaaataacttaaaaaatcaatttattacaaacctcaaacttaaat 45787366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 12498960 - 12498885
Alignment:
Q  253 gagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||||||||||||||||||| ||| | |||| ||||||||||||||||  |||||| |||||  ||||||||||    
T  12498960 gagtcctttaagtttgaggtttgtaatagattgatcatttaagttattttaatcacacataagtcctttaagtttg 12498885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 258 - 333
Target Start/End: Original strand, 17231990 - 17232065
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||||||||||| ||||| ||  ||| |||||||||||||| |||||| |||||  |||||||||||||||    
T  17231990 ctttaagtttgaggtttgtaacagataagtcttttaagttattttgatcacacataagtcttttaagtttgtaaac 17232065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 21322110 - 21322035
Alignment:
Q  253 gagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||||||||||||||||||| ||||| |||  || ||||||||||||||||||||  |||||  ||||||||||    
T  21322110 gagtcctttaagtttgaggtttgtaacacatttttcttttaagttattttggtcacatataagtcctttaagtttg 21322035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 399 - 542
Target Start/End: Complemental strand, 24684194 - 24684054
Alignment:
Q  399 attgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgact 498  Q
    ||||||||| ||||||||||||||  | |||||||| |||||||||||||||| ||  ||    ||| |||  ||||| ||||| || |||||||||||     
T  24684194 attgaaaacgtttacaaacttaaaagatttatgtgtaaccaaaataacttaaatgactaa----ttataaatatcaaacttaaaggatttatatgtgaca 24684099  T
Q  499 aaaataacttaaaa-acaaatttattacaaacgtcaaacttaaag 542  Q
    |||||||||||||| |  ||| ||||| |||| ||||||||||||    
T  24684098 aaaataacttaaaacatcaatctattataaacctcaaacttaaag 24684054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 196 - 333
Target Start/End: Complemental strand, 50290472 - 50290340
Alignment:
Q  196 tttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaag 295  Q
    |||| |||||| ||||||||||||||||||||||||   ||||||||| |||||||  |||  |||||||||||||||| | |   ||||||| || ||     
T  50290472 tttaagtttgaggtttgtaataaattgatcatttaa---gttattttggtcacacataagttttttaagtttgaggtttgtga-tgattggtccttcaaa 50290377  T
Q  296 ttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||||||| | | |||| |||||||||||||||    
T  50290376 ttattttggtcacgcatgagtt-tttaagtttgtaaac 50290340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 257 - 332
Target Start/End: Complemental strand, 55617627 - 55617553
Alignment:
Q  257 cctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    ||||||||||||||||||  |||| ||| ||| ||||||||||||| ||||||| |||| ||||||||||||||||    
T  55617627 cctttaagtttgaggtttgcaacatatttgtcttttaagttattttagtcacacataag-tgtttaagtttgtaaa 55617553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 257 - 332
Target Start/End: Complemental strand, 55624931 - 55624857
Alignment:
Q  257 cctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    ||||||||||||||||||  |||| ||| ||| ||||||||||||| ||||||| |||| ||||||||||||||||    
T  55624931 cctttaagtttgaggtttgcaacatatttgtcttttaagttattttagtcacacataag-tgtttaagtttgtaaa 55624857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 487
Target Start/End: Original strand, 21322035 - 21322109
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    ||||||||||| |||||| |||||||||||||||||||| ||  ||| | |||||||||||||| ||||| ||||    
T  21322035 caaacttaaaggacttatatgtgaccaaaataacttaaaagaaaaatgtgttacaaacctcaaacttaaaggact 21322109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 44057361 - 44057264
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||| | |||||  |||| |||||||||||| ||| ||| ||||||||||||||||||||||| |||| || |||| | |||||| ||||||||    
T  44057361 gttattttggttacacataagtcatttaagtttgagatttgtaataaattggtcatttaagttattttagtcatacataag-tctttaagcttgtaaac 44057264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 191 - 333
Target Start/End: Original strand, 9999287 - 9999426
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaa-gtttgaggtttataacaaattggtca 289  Q
    ||||||||| || ||| |||||||| | ||| ||| |||| |||||| |   |||||||||  |||||||||| |||||| |||| ||||| ||||||      
T  9999287 ggtcctttaagtctgaggtttgtaacagatttatcctttaggttgttct---gatcacacataagtcctttaaagtttgatgtttctaacatattggtt- 9999382  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    |||||||||| |||||||||| ||| || |||||||||||||||    
T  9999383 tttaagttatattggtcacacataaattctttaagtttgtaaac 9999426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 436 - 543
Target Start/End: Complemental strand, 7246161 - 7246053
Alignment:
Q  436 accaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaa 534  Q
    |||||||| ||||||||||||||| | |||||||  | ||| ||||| ||||||| ||| || |||||||||||||  || ||||| |||||||  ||||    
T  7246161 accaaaattacttaaaggatcaatctgttacaaatataaaacttaaaggacttatgtgtaaccaaaataacttaaacgaccaatttgttacaaatatcaa 7246062  T
Q  535 acttaaagg 543  Q
    |||||||||    
T  7246061 acttaaagg 7246053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 409 - 543
Target Start/End: Original strand, 41519353 - 41519489
Alignment:
Q  409 tttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatg-tgactaaaataact 507  Q
    ||||||||||||||  ||||||||||||| ||||| ||||||| ||  ||| | ||| |||||||||  |||||| | || | || |||| |||||||||    
T  41519353 tttacaaacttaaaagacttatgtgtgactaaaatgacttaaatgactaatctgttaaaaacctcaatcttaaataatttttgtgttgacaaaaataact 41519452  T
Q  508 taaaa-acaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||| || ||||| ||| |||| |||||||||||||    
T  41519453 taaaagactaatttgttagaaacctcaaacttaaagg 41519489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 41519491 - 41519439
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtca 307  Q
    |||||||||||||||||||| ||||||||| ||| ||||||||||||| ||||    
T  41519491 gtcctttaagtttgaggtttctaacaaattagtcttttaagttatttttgtca 41519439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 2787945 - 2788021
Alignment:
Q  254 agtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    |||| ||||||||| |||||| ||||| ||| ||  ||||||||||||||||||||| |||||  ||||||||||||||    
T  2787945 agtcatttaagtttaaggtttgtaacatatttgt--tttaagttattttggtcacacataagtcatttaagtttgtaaa 2788021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 543
Target Start/End: Original strand, 24369269 - 24369340
Alignment:
Q  473 caaatttaaatgacttatatgtgactaaaataacttaaaa-acaaatttattacaaacgtcaaacttaaagg 543  Q
    |||| ||||| ||||||  ||||||||||||||||||||  |||||| |||||||||| |||||||||||||    
T  24369269 caaacttaaaggacttaggtgtgactaaaataacttaaaggacaaatctattacaaacctcaaacttaaagg 24369340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 333
Target Start/End: Complemental strand, 24684385 - 24684248
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| |||||| |||| ||||| |||| || |||||||| ||    |||| ||||   ||| ||||||||||||||||| ||||| ||||||      
T  24684385 gggtcctttaagtttgaggtttataatagattggtcttttaagttatt----tgattacacgtaagttctttaagtttgaggtttgtaacagattggt-- 24684292  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||||||  ||||||| |||||  ||||||||| |||||    
T  24684291 tttaagttatttcagtcacacataagtcctttaagtttataaac 24684248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 473 - 543
Target Start/End: Original strand, 26782498 - 26782569
Alignment:
Q  473 caaatttaaatgacttatatgtgactaaaataactt-aaaaacaaatttattacaaacgtcaaacttaaagg 543  Q
    |||| ||||| |||||||||||||| |||||||||| |||||  ||| |||||||||| |||||||||||||    
T  26782498 caaacttaaaagacttatatgtgacaaaaataacttaaaaaatcaatatattacaaacctcaaacttaaagg 26782569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 409 - 512
Target Start/End: Complemental strand, 45787159 - 45787056
Alignment:
Q  409 tttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataactt 508  Q
    |||| |||||||||   ||||||||| |||||||||| ||||| ||||||| | ||||||||||||||  |||  ||||| | ||| || ||||||||||    
T  45787159 tttataaacttaaatgtcttatgtgtaaccaaaataagttaaatgatcaatctgttacaaacctcaaacgtaagggacttctgtgtaaccaaaataactt 45787060  T
Q  509 aaaa 512  Q
    ||||    
T  45787059 aaaa 45787056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 45038252 - 45038318
Alignment:
Q  262 aagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||| |||||||||||| |||||||  ||||||||||| |||||||| |||||  ||||||||||    
T  45038252 aagtttaaggtttataacagattggtccgttaagttatttcggtcacacataagtcctttaagtttg 45038318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 235 - 301
Target Start/End: Original strand, 46196149 - 46196215
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattt 301  Q
    ||||||||| ||||| |  |||||||||||||||| |||| ||||||||||||| |||||| |||||    
T  46196149 gttattttggtcacaaataagtcctttaagtttgacgtttgtaacaaattggtcctttaagatattt 46196215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 7245991 - 7246064
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||||||| |||| |||||  ||| || |||||||||||||||||| || |||||  ||||||||||    
T  7245991 gtcctttaagtttgacgtttgtaacaggttgatcctttaagttattttggtcagacataagtcctttaagtttg 7246064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 255 - 332
Target Start/End: Complemental strand, 26782571 - 26782494
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    |||||||||||||||||||| ||| | |||| |  ||||||||||||| ||||||  |||||  ||||||||||||||    
T  26782571 gtcctttaagtttgaggtttgtaatatattgattttttaagttatttttgtcacatataagtcttttaagtttgtaaa 26782494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 40146955 - 40147012
Alignment:
Q  259 tttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagt 316  Q
    |||||||||||||||| | | | ||| ||||||||||||||||||||||||| |||||    
T  40146955 tttaagtttgaggtttgtgatagatttgtcatttaagttattttggtcacacataagt 40147012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 46196456 - 46196383
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||||||| |||||||||| ||  ||||| ||||||||||| |||| || |||||  ||||||||||    
T  46196456 gtcctttaagtttgacgtttataacagataagtcatgtaagttatttttgtcatacataagtcctttaagtttg 46196383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 451
Target Start/End: Complemental strand, 40119633 - 40119549
Alignment:
Q  368 ttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaa-gaacttatgtgtgaccaaaataacttaaa 451  Q
    ||||||||| ||||||||||| || ||||| ||||||||| |||| ||||||||| ||||||| || | | |||||| |||||||    
T  40119633 ttttgtaatatttggttaacataaggactaaattgaaaacgtttataaacttaaatgaacttacgtataatcaaaattacttaaa 40119549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 235 - 295
Target Start/End: Original strand, 45038285 - 45038345
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaag 295  Q
    ||||||| | |||||||  ||||||||||||||||| ||||||||| ||||||| ||||||    
T  45038285 gttatttcggtcacacataagtcctttaagtttgagatttataacagattggtcctttaag 45038345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 309
Target Start/End: Complemental strand, 11966850 - 11966795
Alignment:
Q  254 agtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcaca 309  Q
    ||||||||||||||||||||  ||| |||||| |||||||| |||||||| |||||    
T  11966850 agtcctttaagtttgaggttggtaataaattgatcatttaaattattttgatcaca 11966795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 316
Target Start/End: Complemental strand, 53863659 - 53863596
Alignment:
Q  253 gagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagt 316  Q
    ||||||||||||||| | |||| ||| | ||||||| ||||||||||||| ||||||| |||||    
T  53863659 gagtcctttaagtttcaagtttgtaatagattggtcgtttaagttattttagtcacacataagt 53863596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 193 - 370
Target Start/End: Complemental strand, 7246361 - 7246188
Alignment:
Q  193 tcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcattt 292  Q
    ||||||| |||||| |||||||| | |||| || ||||||||   |||||| ||| |||  ||||||||||||||||| |||  || | ||||||  |||    
T  7246361 tcctttaagtttgaggtttgtaacatattggtcttttaagtt---attttggtcatacataagtcctttaagtttgagatttggaatagattggttcttt 7246265  T
Q  293 aagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttt 370  Q
    |  |||||||  |||||| |||||  |||||||||||||| |       ||||||||||| ||| |||||||||||||    
T  7246264 agtttatttttatcacacataagtactttaagtttgtaaa-agttttcaatttagtccttatacgacatcatcatttt 7246188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 255 - 301
Target Start/End: Complemental strand, 14984109 - 14984063
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattt 301  Q
    ||||||||||||||| |||| ||||| ||||||| ||||||||||||    
T  14984109 gtcctttaagtttgatgtttgtaacatattggtcctttaagttattt 14984063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 487
Target Start/End: Original strand, 25056161 - 25056235
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    ||||||||||  |||| ||| | |||||||||||||||| || |||| | |||||||||||||| ||||| ||||    
T  25056161 caaacttaaatgacttttgtctcaccaaaataacttaaaagaccaatttgttacaaacctcaaacttaaaagact 25056235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 332
Target Start/End: Original strand, 40146955 - 40147087
Alignment:
Q  196 tttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaag 295  Q
    |||| |||||| |||||| ||| |||  |||||||||||   |||||| |||||||  ||||||| ||||||||||||| ||| | |||| ||  ||| |    
T  40146955 tttaagtttgaggtttgtgatagatttgtcatttaagtt---attttggtcacacataagtccttgaagtttgaggtttgtaatagattgatc-cttagg 40147050  T
Q  296 ttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    ||||||||||||||| | |||  |||||| |||||||    
T  40147051 ttattttggtcacacatgagtcctttaaggttgtaaa 40147087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 255 - 333
Target Start/End: Complemental strand, 40395377 - 40395299
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||| ||| |||||||||| ||||| ||| ||| ||||||||||||  ||||||| |||||  ||||| |||||||||    
T  40395377 gtcctctaaatttgaggtttgtaacagattagtcctttaagttatttctgtcacacataagtcctttaaatttgtaaac 40395299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 308
Target Start/End: Original strand, 45038191 - 45038241
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcatttaagttattttggtcac 308  Q
    ||||||||||||||||| ||| | |||| || |||||||||||||||||||    
T  45038191 ctttaagtttgaggtttgtaatatattgatcttttaagttattttggtcac 45038241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 290 - 332
Target Start/End: Original strand, 51950564 - 51950606
Alignment:
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  51950564 tttaagttattttggtcacacataagtcctttaagtttgtaaa 51950606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 12592259 - 12592316
Alignment:
Q  276 taacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||| |||| |||||||||||||||||||||||| ||| |  | |||||||||||||    
T  12592259 taacagattgatcatttaagttattttggtcacacataaatcttgtaagtttgtaaac 12592316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 316
Target Start/End: Original strand, 17236773 - 17236834
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagt 316  Q
    ||||||||||||| |  ||| ||| ||||  ||||||||||||||||||||||||| |||||    
T  17236773 gtcctttaagtttaaaatttgtaataaataagtcatttaagttattttggtcacacataagt 17236834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 259 - 328
Target Start/End: Original strand, 25055884 - 25055953
Alignment:
Q  259 tttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||||||||||||| ||| | ||| ||| |||||||||||||||| |||| ||| |  ||||||||||    
T  25055884 tttaagtttgaggtttgtaatagatttgtcctttaagttattttggtgacacataaatcctttaagtttg 25055953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 40395098 - 40395171
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||||||||||||| ||| | ||| ||||||| |||| |||||||| ||||||  |||||  ||||||||||    
T  40395098 gtcctttaagtttgagatttgttacagattggtcctttaggttatttttgtcacatataagtcctttaagtttg 40395171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 413 - 482
Target Start/End: Complemental strand, 40395171 - 40395102
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||| |||||| |||||| |||||||| ||||||| |||| | | ||||| |||||| |||||    
T  40395171 caaacttaaaggacttatatgtgacaaaaataacctaaaggaccaatctgtaacaaatctcaaacttaaa 40395102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 8e-60; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 259 - 541
Target Start/End: Complemental strand, 4048487 - 4048205
Alignment:
Q  259 tttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctacca 358  Q
    |||| |||| || ||| ||||| |||| ||||||||||||||||||| |||| |||||  ||||||||||||||||       |||||||| ||||||||    
T  4048487 tttaggtttaagatttgtaacagattgatcatttaagttattttggttacacataagtcctttaagtttgtaaacattttcg-atttagtctttctacca 4048389  T
Q  359 catcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaa 458  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||| | |||| ||||||||  ||||||||||||| |||    
T  4048388 catcatcatttttgtaatgtttggttaacaaaatgactaaattgaaaacgtttacaaacttcaaggatttatatgtgaccattataacttaaaggaccaa 4048289  T
Q  459 tattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaa 541  Q
    ||| |||||||||||| | |||||  |||||| |||||| ||||||||||||| ||  | | |||||||||| |||||||||||    
T  4048288 tatgttacaaacctcagacttaaagaacttatgtgtgaccaaaataacttaaagaattagtctattacaaacctcaaacttaaa 4048205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 191 - 543
Target Start/End: Complemental strand, 27280948 - 27280615
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcat 290  Q
    ||||||||| |||||| |||||||| |  |||| | ||||||||   |||||| |||||||  ||| |||||||||||||||| ||||||||||| || |    
T  27280948 ggtcctttaagtttgaggtttgtaacagcttgaccctttaagtt---attttggtcacacataagtactttaagtttgaggttcataacaaattgatcct 27280852  T
Q  291 ttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacaga 390  Q
    ||||||||||||||| |||| |||||  || ||||||                 |||||||||| |||||||||| ||||||||||||||||||||| ||    
T  27280851 ttaagttattttggtaacacataagtccttgaagttt-----------------tagtccttctgccacatcatcgtttttgtaatgtttggttaactga 27280769  T
Q  391 atgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttat 490  Q
    ||||||| || |||||| ||||||||||||||| ||||| |||| |||||||||||||||  ||| ||| | |||| ||||||||| |||||||||||||    
T  27280768 atgactaaatcgaaaacgtttacaaacttaaaggacttacgtgttaccaaaataacttaagtgattaatctcttacgaacctcaaacttaaatgacttat 27280669  T
Q  491 atgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
     |||| |||||||||||||||  || ||||| | |||||| |||||||||||||    
T  27280668 gtgtggctaaaataacttaaaggaccaatttgtaacaaacttcaaacttaaagg 27280615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 386 - 541
Target Start/End: Complemental strand, 11975606 - 11975451
Alignment:
Q  386 acagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatga 485  Q
    |||||| ||||| ||||||||| |||| |||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||| ||    
T  11975606 acagaaggactaaattgaaaacgtttaaaaacttaaaggacttatgtgtgaccacaataacttaaaggatcaatatgttacaaacctcaaacttaaagga 11975507  T
Q  486 cttatatgtgactaaaataacttaaaaacaaatttattacaaacgtcaaacttaaa 541  Q
    ||||| |||| | |||||||||||||||| |||||||||||||| |||||||||||    
T  11975506 cttatgtgtgtcaaaaataacttaaaaactaatttattacaaacctcaaacttaaa 11975451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 255 - 542
Target Start/End: Complemental strand, 6694808 - 6694533
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttct 354  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||  ||||||||| |||||        ||||| |||||||    
T  6694808 gtcctttaagtttgaggtttgtaacatattggtcctttaagttattttggtcacacataagtcctttaagtttataaac-gttttcgattta-tccttct 6694711  T
Q  355 accacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaagga 454  Q
     ||| |||||          |||||||||||||| || ||||| ||||||||| ||| ||||||||||| |||||||||| || ||||||||||||||||    
T  6694710 gccatatcat----------atgtttggttaacataaagactaaattgaaaacgtttgcaaacttaaaggacttatgtgtaac-aaaataacttaaagga 6694622  T
Q  455 tcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaa-acaaatttattacaaacgtcaaacttaaag 542  Q
    ||||| | ||||||||| |||| ||||| ||||||| || ||  |||||||||||||| || |||||||||||||| ||||||||||||    
T  6694621 tcaatctattacaaaccacaaacttaaaggacttatgtgggaacaaaataacttaaaagaccaatttattacaaacctcaaacttaaag 6694533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 190 - 482
Target Start/End: Original strand, 40951629 - 40951918
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||| ||||| ||||||  |||||| || ||||||||||||||||   |||||| ||||| |  |||  |||||||||||||| | || || |||| |||    
T  40951629 gggttctttaagtttgagatttgtagtagattgatcatttaagtt---attttgctcacaaataagtt-tttaagtttgaggtatgtaccagattg-tca 40951723  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaa--- 386  Q
    ||||||||||||||||| ||| |||||  |||||||||||||||        |||||||||||||  ||||||||| ||||||||||||||||||||       
T  40951724 tttaagttattttggtcgcacataagtcatttaagtttgtaaac-gctttcgatttagtccttctgtcacatcatcgtttttgtaatgtttggttaatta 40951822  T
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    || |||||||| || |||||  ||||||||||||||  | ||||||||||||||||||||||||| ||||||| | |||||||||||||| |||||    
T  40951823 cataatgactaaatagaaaatgtttacaaacttaaatgatttatgtgtgaccaaaataacttaaatgatcaatctattacaaacctcaaacttaaa 40951918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 342 - 497
Target Start/End: Complemental strand, 3198414 - 3198259
Alignment:
Q  342 atttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaa 441  Q
    |||||||| |||| ||| |||||| ||||||||||||||||||||||| |||| || ||||||||  ||||||||||| ||||||||||||| |||||||    
T  3198414 atttagtctttctgccagatcatcgtttttgtaatgtttggttaacaggatgattaaattgaaaatgtttacaaactttaagaacttatgtgggaccaaa 3198315  T
Q  442 ataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgac 497  Q
    |||||||||| || |||| | |||||||||||||| |||||  |||||| ||||||    
T  3198314 ataacttaaaagaccaatttgttacaaacctcaaacttaaagaacttatgtgtgac 3198259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 378 - 543
Target Start/End: Original strand, 27576501 - 27576667
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaat 477  Q
    ||||| || ||||| ||| | ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||   |||||||  |||||     
T  27576501 tttggctagcagaaggacaaaattgaaaacttttacaaacttaaaggacttatgtgtgaccaaaataacctaaaggaccaatcagttacaaatatcaaac 27576600  T
Q  478 ttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||||||||||| |||||| |||||||||||||  || ||| | ||||||||||||||||||||||    
T  27576601 ttaaatgacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacgtcaaacttaaagg 27576667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 378 - 543
Target Start/End: Original strand, 29710490 - 29710656
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaat 477  Q
    ||||||||||| || ||||| |||||||| |||||||||||||||  ||||||||||||| |||||||||||||||| ||||   ||||||| ||||||     
T  29710490 tttggttaacataaggactaaattgaaaagttttacaaacttaaatgacttatgtgtgacgaaaataacttaaaggaccaatccgttacaaatctcaaac 29710589  T
Q  478 ttaaatgacttatatgtgactaaaataacttaaaa-acaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||||||||||| ||| || |||||||| ||||| || ||| | ||||||||||||||||||||||    
T  29710590 ttaaatgacttatgtgttaccaaaataacctaaaagaccaatctgttacaaacgtcaaacttaaagg 29710656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 254 - 476
Target Start/End: Original strand, 43258302 - 43258522
Alignment:
Q  254 agtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttc 353  Q
    ||||||||||  |||| |||| ||| | |||| |||||||||||||||| ||||||| |||||  ||||||||||||||||       |||||||| |||    
T  43258302 agtcctttaaaattgaagtttgtaatagattgatcatttaagttatttttgtcacacataagtgttttaagtttgtaaacattttcg-atttagtctttc 43258400  T
Q  354 taccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaagg 453  Q
    | | |||||||| |||||||||| ||| |||||||||||||||| ||| ||||| |||| |||||||||| |||||||||||| |||||||| |||||      
T  43258401 tgcgacatcatcgtttttgtaatattttgttaacagaatgactaaattaaaaacgtttaaaaacttaaaggacttatgtgtgatcaaaataatttaaa-a 43258499  T
Q  454 atcaatattttacaaacctcaaa 476  Q
    |||||| | ||||||| ||||||    
T  43258500 atcaatctattacaaatctcaaa 43258522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 367 - 543
Target Start/End: Original strand, 30869559 - 30869736
Alignment:
Q  367 tttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttac 466  Q
    |||||||||||||||||||||| || ||||| ||||||||  ||||||||||||||| ||||| | ||||  |||||||||||||||| |||| | ||||    
T  30869559 tttttgtaatgtttggttaacaaaaagactaaattgaaaatgtttacaaacttaaaggacttacgcgtgataaaaataacttaaaggaccaatctgttac 30869658  T
Q  467 aaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    |||||||||| |||||  |||||| | |||| |||||||||||||  || |||  ||||||||| |||||||||||||    
T  30869659 aaacctcaaacttaaagaacttatgtatgaccaaaataacttaaaggaccaatcaattacaaacctcaaacttaaagg 30869736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 393 - 568
Target Start/End: Complemental strand, 42312911 - 42312735
Alignment:
Q  393 gactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatat 492  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||| |||||||  |||| || |||| | ||||||| |||||| ||||| ||||||| |    
T  42312911 gactaaattgaaaacttttacaaatttaaaggacttatgtgtgacaaaaataaactaaatgaccaatctattacaaatctcaaacttaaaggacttatgt 42312812  T
Q  493 gtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaaggttattcggtgtaacttagcctaaaa 568  Q
    ||||| |||||||||||||  || ||| |||||||||| |||||||||||||   |  ||||||| |||||||||||    
T  42312811 gtgaccaaaataacttaaatgaccaatatattacaaacctcaaacttaaaggacctcaggtgtaatttagcctaaaa 42312735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 390 - 543
Target Start/End: Original strand, 44293954 - 44294108
Alignment:
Q  390 aatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgactta 489  Q
    |||||||| || |||||  ||||||||||||||| |||||| |||||||||||||||||||||||||||| | ||||||||||||||  |||| ||||||    
T  44293954 aatgactatatcgaaaatgtttacaaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacgtaaaagactta 44294053  T
Q  490 tatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    | |||||| ||||||| |||||  || ||| | |||||||| ||||| |||||||    
T  44294054 tgtgtgaccaaaataatttaaaggactaatatgttacaaacctcaaatttaaagg 44294108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 378 - 511
Target Start/End: Complemental strand, 22750483 - 22750350
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaat 477  Q
    ||||||||| | |||| ||| ||||||||| || |||||||||||  | |||||| |||| ||||||| ||||| ||||||||| ||||||||||||||     
T  22750483 tttggttaataaaatggctaaattgaaaacgttcacaaacttaaaagatttatgtatgacaaaaataatttaaatgatcaatatattacaaacctcaaaa 22750384  T
Q  478 ttaaatgacttatatgtgactaaaataacttaaa 511  Q
    ||||||||||||| |||||| |||||||||||||    
T  22750383 ttaaatgacttatgtgtgaccaaaataacttaaa 22750350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 413 - 543
Target Start/End: Complemental strand, 29710451 - 29710321
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa- 511  Q
    |||||||||||| |||| |||||||||||||||||||||||| |||||| |||||||  ||||| ||||| |||||||||||||| |||||||||||||     
T  29710451 caaacttaaaga-cttaagtgtgaccaaaataacttaaaggaccaatatgttacaaatatcaaacttaaaggacttatatgtgaccaaaataacttaaag 29710353  T
Q  512 aacaaatttattacaaacgtcaaacttaaagg 543  Q
     |  ||| | ||||||||||||||||||||||    
T  29710352 gattaatctgttacaaacgtcaaacttaaagg 29710321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 388 - 534
Target Start/End: Original strand, 4048393 - 4048539
Alignment:
Q  388 agaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    |||| ||||| || |||||  ||||||||||||||| |||||||||| |||||||||||||||| ||||||| | ||||||| || |||  |||| || |    
T  4048393 agaaagactaaatcgaaaatgtttacaaacttaaaggacttatgtgtaaccaaaataacttaaatgatcaatctgttacaaatcttaaacctaaaagatt 4048492  T
Q  488 tatatgtgactaaaataacttaaaaacaaatttattacaaacgtcaa 534  Q
    ||| ||| || |||||||||||||||| |||||||| ||||| ||||    
T  4048493 tatgtgtcaccaaaataacttaaaaaccaatttattgcaaacttcaa 4048539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 382 - 511
Target Start/End: Original strand, 11975614 - 11975744
Alignment:
Q  382 gttaacagaatgactagattgaaaacttttacaaacttaaa-gaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaattta 480  Q
    ||||| |||| ||||| ||||||||  |||||||||||||| | ||||||||||||| |||||||||||||||| ||||   |||||||||||||| |||    
T  11975614 gttaatagaaggactaaattgaaaatatttacaaacttaaaaggacttatgtgtgacaaaaataacttaaaggaccaatcagttacaaacctcaaactta 11975713  T
Q  481 aatgacttatatgtgactaaaataacttaaa 511  Q
    || ||||||| ||| || |||||||||||||    
T  11975714 aaggacttatctgttacaaaaataacttaaa 11975744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 342 - 513
Target Start/End: Original strand, 26185890 - 26186064
Alignment:
Q  342 atttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaactttta----caaacttaaagaacttatgtgtgac 437  Q
    |||||||||||||  ||||| ||||||||| ||||||||||||||||||| | ||| ||  ||||| ||||    ||| ||||||| |||||||||||||    
T  26185890 atttagtccttctgtcacattatcatttttataatgtttggttaacagaaggtctaaataaaaaacgtttacaatcaatcttaaaggacttatgtgtgac 26185989  T
Q  438 caaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaaa 513  Q
    |||||||| |||||||| | | || ||||| |||||||| ||||| || |||| ||  ||||||||||||||||||    
T  26185990 caaaataatttaaaggaccca-atgttacacacctcaaacttaaaggaattatgtgctactaaaataacttaaaaa 26186064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 378 - 451
Target Start/End: Complemental strand, 29019415 - 29019342
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaa 451  Q
    |||| ||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  29019415 tttgattaacagaatgactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 29019342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 402 - 482
Target Start/End: Original strand, 6694724 - 6694804
Alignment:
Q  402 gaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||| |||| |||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||    
T  6694724 gaaaacgtttataaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatatgttacaaacctcaaacttaaa 6694804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 191 - 370
Target Start/End: Original strand, 42312757 - 42312932
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcat 290  Q
    ||||||||| |||||| |||||||||| |||| |||||||||||   |||||| |||||||  ||||||||||||||||| ||| ||| | |||||||||    
T  42312757 ggtcctttaagtttgaggtttgtaatatattggtcatttaagtt---attttggtcacacataagtcctttaagtttgagatttgtaatagattggtcat 42312853  T
Q  291 ttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttt 370  Q
    |||  ||||||| ||||||| |||||  ||||| |||||||| |       ||||||||||| ||| |||||||||||||    
T  42312854 ttagtttatttttgtcacacataagtcctttaaatttgtaaa-agttttcaatttagtccttatacgacatcatcatttt 42312932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 245 - 334
Target Start/End: Original strand, 3198260 - 3198349
Alignment:
Q  245 tcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
    |||||||  ||| ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||||| || |||||||||||||    
T  3198260 tcacacataagttctttaagtttgaggtttgtaacaaattggtcttttaagttattttggtcccacataagttcttaaagtttgtaaaca 3198349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 404 - 543
Target Start/End: Complemental strand, 41666285 - 41666145
Alignment:
Q  404 aaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaat 503  Q
    |||| ||||||||||||||  |||||||||| ||||||||| || |||  |||||||| |||||||||||||| ||||| ||||||||| | || |||||    
T  41666285 aaacgtttacaaacttaaactacttatgtgtaaccaaaatagctaaaaaaatcaatatgttacaaacctcaaacttaaaggacttatatataacaaaaat 41666186  T
Q  504 aacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||||||  |  ||||| ||| |||| |||||||||||||    
T  41666185 aacttaaatgatcaatttgttataaacctcaaacttaaagg 41666145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 193 - 334
Target Start/End: Complemental strand, 30869737 - 30869599
Alignment:
Q  193 tcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcattt 292  Q
    ||||||| |||||| |||||||||  |||| || ||||||||   |||||| ||| |||  ||| ||||||||||||||||| ||||| ||||||| |||    
T  30869737 tcctttaagtttgaggtttgtaattgattggtcctttaagtt---attttggtcatacataagttctttaagtttgaggtttgtaacagattggtccttt 30869641  T
Q  293 aagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
    ||||||||||  |||| |||||||  ||||||||||||||||    
T  30869640 aagttatttttatcacgcgtaagtcctttaagtttgtaaaca 30869599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 425 - 512
Target Start/End: Original strand, 42313008 - 42313095
Alignment:
Q  425 acttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaa 512  Q
    ||||||||||||||||||||| |||||||| |||| | |||||||  ||||||||||| ||||||| |||||| ||||||||||||||    
T  42313008 acttatgtgtgaccaaaataatttaaaggaccaatttgttacaaatatcaaatttaaaggacttatgtgtgaccaaaataacttaaaa 42313095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 414 - 511
Target Start/End: Original strand, 27280815 - 27280912
Alignment:
Q  414 aaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa 511  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||| | |||  ||||||||| |||||  |||||| |||||| |||||||||||||    
T  27280815 aaacttcaaggacttatgtgttaccaaaataacttaaaggatcaatttgttatgaacctcaaacttaaagtacttatgtgtgaccaaaataacttaaa 27280912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 387 - 492
Target Start/End: Complemental strand, 43258402 - 43258297
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    ||||| ||||| || |||||  ||||||||||||||  ||||||||||||| ||||||||||||| ||||||| | |||||||| |||| |||||| |||    
T  43258402 cagaaagactaaatcgaaaatgtttacaaacttaaaacacttatgtgtgacaaaaataacttaaatgatcaatctattacaaacttcaattttaaaggac 43258303  T
Q  487 ttatat 492  Q
    ||||||    
T  43258302 ttatat 43258297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 190 - 328
Target Start/End: Original strand, 29710317 - 29710451
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| |||||| |||||||| | ||| ||| ||||||||   |||||| ||||| |  ||||||||||||||||  ||| ||||| |||||||     
T  29710317 gggtcctttaagtttgacgtttgtaacagattaatcctttaagtt---attttggtcacatataagtcctttaagtttgatatttgtaacatattggtcc 29710413  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||||||||||||| |||| | ||||||||||    
T  29710414 tttaagttattttggtcacacttaag-tctttaagtttg 29710451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 27576671 - 27576596
Alignment:
Q  253 gagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||| |||||  ||||||||||    
T  27576671 gagtcctttaagtttgacgtttgtaacagattggtcctttaagttattttggtcacacataagtcatttaagtttg 27576596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 192 - 332
Target Start/End: Complemental strand, 27576669 - 27576532
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||||| |||||| |||||||| | |||| || ||||||||   |||||| |||||||  |||| |||||||||||  ||| ||||  ||||||| ||    
T  27576669 gtcctttaagtttgacgtttgtaacagattggtcctttaagtt---attttggtcacacataagtcatttaagtttgatatttgtaactgattggtcctt 27576573  T
Q  292 taagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    || |||||||||||||||| |||||  ||||||||||||||    
T  27576572 taggttattttggtcacacataagtcctttaagtttgtaaa 27576532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 33254490 - 33254420
Alignment:
Q  91 tttatcatatacctttaaactattataggtgtatatacctgtt-aaaaataggtaataatctggtgtggca 160  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||| | |||||||||| |||||||    
T  33254490 tttatcatatacctttaaactattataggtgtatatacctattaaaaaatggataataatctgatgtggca 33254420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 236 - 334
Target Start/End: Complemental strand, 44294069 - 44293971
Alignment:
Q  236 ttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
    |||||||| |||||||  |||| |||| ||||||||||| ||||| |||| || ||||||||||||||||||||  |||||  ||||||||||||||||    
T  44294069 ttattttggtcacacataagtcttttacgtttgaggtttgtaacagattgatcctttaagttattttggtcacaaataagtactttaagtttgtaaaca 44293971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 190 - 333
Target Start/End: Original strand, 27280611 - 27280751
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| ||||||||||||| | |||||| || ||||||||   |||||   ||||||  |||| |||||||||||||||  ||| | |||  |||    
T  27280611 gggtcctttaagtttgaagtttgttacaaattggtcctttaagtt---attttagccacacataagtcatttaagtttgaggttcgtaagagattaatca 27280707  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
     ||||||||||||||| ||||||||||  |||||||||||||||    
T  27280708 cttaagttattttggtaacacgtaagtcctttaagtttgtaaac 27280751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 413 - 482
Target Start/End: Original strand, 27280874 - 27280943
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||  | |||||||||||||| |||||    
T  27280874 caaacttaaagtacttatgtgtgaccaaaataacttaaagggtcaagctgttacaaacctcaaacttaaa 27280943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 256 - 332
Target Start/End: Complemental strand, 6069338 - 6069262
Alignment:
Q  256 tcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    ||||||||||||||||||| ||||| ||  |||||||||||||||||| ||| || |||||| ||||||||||||||    
T  6069338 tcctttaagtttgaggtttgtaacatatatgtcatttaagttattttgatcaaacataagttctttaagtttgtaaa 6069262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 3198513 - 3198458
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacac 310  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||    
T  3198513 gtcctttaagtttgaggtctataataaattggttatttaagttattttggtcacac 3198458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 254 - 333
Target Start/End: Original strand, 11975505 - 11975584
Alignment:
Q  254 agtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||||||||||||||| ||||| |||| || ||||||||||| ||||||||| |||||  ||||||||| |||||    
T  11975505 agtcctttaagtttgaggtttgtaacatattgatcctttaagttattgtggtcacacataagtcctttaagtttttaaac 11975584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 259 - 334
Target Start/End: Complemental strand, 40951918 - 40951843
Alignment:
Q  259 tttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
    |||||||||||||||| ||| | |||| |||||||||||||||||||||||| ||| |  ||||||||||||||||    
T  40951918 tttaagtttgaggtttgtaatagattgatcatttaagttattttggtcacacataaatcatttaagtttgtaaaca 40951843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 194 - 482
Target Start/End: Original strand, 41666145 - 41666418
Alignment:
Q  194 cctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcattta 293  Q
    |||||| |||||| |||| ||| |||||||||||||||||| || || | ||   | |  ||||||||||||||||||||| ||||| |||| |  |||     
T  41666145 cctttaagtttgaggtttataacaaattgatcatttaagttatttttgttat---atataagtcctttaagtttgaggtttgtaacatattgattttttt 41666241  T
Q  294 agttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatg 393  Q
    || ||||||||| |||| ||||| ||||||||||||||||        ||||| ||||| | |||||||||| ||||||||||           |||| |    
T  41666242 agctattttggttacacataagtagtttaagtttgtaaac-gtttacgatttaatccttttgccacatcatcttttttgtaat-----------agaagg 41666329  T
Q  394 actagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||| || |||||  ||||| ||||| ||| |||||||||||| | ||||||||||| |||  ||| | |||||||||||||| |||||    
T  41666330 actaaatcgaaaatgtttaccaactttaaggacttatgtgtgatcgaaataacttaagggacaaatctgttacaaacctcaaacttaaa 41666418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 368 - 482
Target Start/End: Complemental strand, 6068829 - 6068715
Alignment:
Q  368 ttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttaca 467  Q
    |||||||| ||| |||||||| |||||||| ||||||| | |||| ||||||| |||| |||||| |||  ||||||| ||||||||   || | |||||    
T  6068829 ttttgtaacgttgggttaacaaaatgactaaattgaaatcgtttataaacttatagaatttatgtatgattaaaataatttaaaggacatatttattaca 6068730  T
Q  468 aacctcaaatttaaa 482  Q
    |||||||||||||||    
T  6068729 aacctcaaatttaaa 6068715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 426 - 543
Target Start/End: Complemental strand, 6222198 - 6222081
Alignment:
Q  426 cttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaa-acaaatttatta 524  Q
    ||||||||||||||||||||||||||  |  ||| | |||||||  | ||| ||||| ||||||| ||||||||||||||||||||| || ||| |||||    
T  6222198 cttatgtgtgaccaaaataacttaaataactaatctgttacaaattttaaacttaaa-gacttatgtgtgactaaaataacttaaaagaccaatatatta 6222100  T
Q  525 caaacgtcaaacttaaagg 543  Q
    ||||| | |||||||||||    
T  6222099 caaaccttaaacttaaagg 6222081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 413 - 487
Target Start/End: Original strand, 27576596 - 27576670
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    ||||||||||  |||||||||||||||||||||||||||||| |||| | |||||||| ||||| ||||| ||||    
T  27576596 caaacttaaatgacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacgtcaaacttaaaggact 27576670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 192 - 332
Target Start/End: Complemental strand, 29710658 - 29710521
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||||| |||||| |||||||| | |||| || |||| |||   |||||| | |||||  |||| |||||||||||| ||| ||||  ||||||| ||    
T  29710658 gtcctttaagtttgacgtttgtaacagattggtcttttaggtt---attttggtaacacataagtcatttaagtttgagatttgtaacggattggtcctt 29710562  T
Q  292 taagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    ||||||||||| ||||||| |||||  ||||||||||||||    
T  29710561 taagttattttcgtcacacataagtcatttaagtttgtaaa 29710521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 409 - 482
Target Start/End: Original strand, 6069262 - 6069335
Alignment:
Q  409 tttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||||||||||||||||||||| ||| |||||||||||||| ||   |||| |||||||||||||| |||||    
T  6069262 tttacaaacttaaagaacttatgtttgatcaaaataacttaaatgacatatatgttacaaacctcaaacttaaa 6069335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 31453120 - 31453047
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||||||||||||||||| ||||| ||| || |||||||||||||| ||||||| |||||  ||||||||||    
T  31453120 gtcctttaagtttgaggtttgtaacagattagttatttaagttatttttgtcacacataagtcctttaagtttg 31453047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 235 - 316
Target Start/End: Complemental strand, 42313089 - 42313008
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagt 316  Q
    ||||||||| |||||||  |||||||||| |||||  ||| ||||||||||||| ||||| ||||||||||||||| |||||    
T  42313089 gttattttggtcacacataagtcctttaaatttgatatttgtaacaaattggtcctttaaattattttggtcacacataagt 42313008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 195 - 333
Target Start/End: Original strand, 6694533 - 6694667
Alignment:
Q  195 ctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaa 294  Q
    ||||| |||||| ||||||||||||||| || ||||||||   |||||| || ||||  ||||||||||||||| ||||| ||| | |||| || |||||    
T  6694533 ctttaagtttgaggtttgtaataaattggtcttttaagtt---attttgttcccacataagtcctttaagtttgtggtttgtaatagattgatcctttaa 6694629  T
Q  295 gttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    |||||||| || |||| |||||  |||||||||| ||||    
T  6694630 gttatttt-gttacacataagtcctttaagtttgcaaac 6694667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 11975720 - 11975641
Alignment:
Q  254 agtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagt-tgtttaagtttgtaaa 332  Q
    ||||||||||||||||||||| ||||  ||||||| ||||||||||||| ||||||| |||||   ||||||||||||||    
T  11975720 agtcctttaagtttgaggtttgtaactgattggtcctttaagttatttttgtcacacataagtccttttaagtttgtaaa 11975641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 29710660 - 29710585
Alignment:
Q  253 gagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||||||||| |||| ||||| ||||||| |||| ||||||||||| |||| |||||  ||||||||||    
T  29710660 gagtcctttaagtttgacgtttgtaacagattggtcttttaggttattttggtaacacataagtcatttaagtttg 29710585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 235 - 302
Target Start/End: Original strand, 30662194 - 30662261
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttatttt 302  Q
    ||||||||||| |||||  ||||||||||||||||| ||||||||| |||| |||||||| |||||||    
T  30662194 gttattttgattacacataagtcctttaagtttgagatttataacagattgatcatttaaattatttt 30662261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 414 - 487
Target Start/End: Complemental strand, 6222150 - 6222078
Alignment:
Q  414 aaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    ||||||||||| |||||||||||| ||||||||||||| || |||||| |||||||||| ||| ||||| ||||    
T  6222150 aaacttaaaga-cttatgtgtgactaaaataacttaaaagaccaatatattacaaaccttaaacttaaaggact 6222078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 386 - 511
Target Start/End: Complemental strand, 40951789 - 40951666
Alignment:
Q  386 acagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatga 485  Q
    |||||| ||||| || |||| | ||||||||||||||  ||||||||| ||||||||||||||||| || |||| |  |||| |||||||| |||||  |    
T  40951789 acagaaggactaaatcgaaagcgtttacaaacttaaatgacttatgtgcgaccaaaataacttaaatga-caatctggtacatacctcaaacttaaa-aa 40951692  T
Q  486 cttatatgtgactaaaataacttaaa 511  Q
    ||||| |||||  |||||||||||||    
T  40951691 cttatttgtgagcaaaataacttaaa 40951666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 413 - 476
Target Start/End: Complemental strand, 3198283 - 3198222
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaa 476  Q
    ||||||||||||||||||||||||||   |||||||||||||||||| | |||||||| |||||    
T  3198283 caaacttaaagaacttatgtgtgacc--cataacttaaaggatcaatctgttacaaacttcaaa 3198222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 26978402 - 26978282
Alignment:
Q  367 tttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttac 466  Q
    ||||||||| ||||||||||| ||| |  || ||||||||| | ||||||||||||| |||| ||||| |||||||||  ||||  || | || | ||||    
T  26978402 tttttgtaacgtttggttaaccgaaggtttaaattgaaaacgtctacaaacttaaaggacttgtgtgttaccaaaatattttaacagacctatttattac 26978303  T
Q  467 aaacctcaaatttaaatgact 487  Q
    |||||| ||||||||| ||||    
T  26978302 aaaccttaaatttaaaagact 26978282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 253 - 316
Target Start/End: Original strand, 6222077 - 6222140
Alignment:
Q  253 gagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagt 316  Q
    ||||||||||||||| |||||| ||| | ||||||| ||||||||||||| ||||||| |||||    
T  6222077 gagtcctttaagtttaaggtttgtaatatattggtcttttaagttattttagtcacacataagt 6222140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 416 - 450
Target Start/End: Complemental strand, 44293845 - 44293811
Alignment:
Q  416 acttaaagaacttatgtgtgaccaaaataacttaa 450  Q
    |||||||||||||||||||||||||||||||||||    
T  44293845 acttaaagaacttatgtgtgaccaaaataacttaa 44293811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 250 - 316
Target Start/End: Complemental strand, 44294115 - 44294049
Alignment:
Q  250 cacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagt 316  Q
    |||| ||||||||| |||||||||| ||||| ||| ||| ||||| ||||||||||||||| |||||    
T  44294115 cacgtgtcctttaaatttgaggtttgtaacatattagtcctttaaattattttggtcacacataagt 44294049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 543
Target Start/End: Original strand, 31453045 - 31453118
Alignment:
Q  471 ctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    |||||| ||||| ||||||| |||||| ||||||||||||| ||| ||| | |||||||| |||||||||||||    
T  31453045 ctcaaacttaaaggacttatgtgtgacaaaaataacttaaataactaatctgttacaaacctcaaacttaaagg 31453118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 413 - 482
Target Start/End: Original strand, 31453047 - 31453116
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||| ||||||||||||| |||||||||||||  |  ||| | |||||||||||||| |||||    
T  31453047 caaacttaaaggacttatgtgtgacaaaaataacttaaataactaatctgttacaaacctcaaacttaaa 31453116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 413 - 482
Target Start/End: Complemental strand, 46713282 - 46713214
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||||||||| ||||||| ||||||||||||||||||  |  ||| | ||||||||||||||||||||    
T  46713282 caaacttaaaga-cttatgtatgaccaaaataacttaaataactaatctattacaaacctcaaatttaaa 46713214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 256 - 325
Target Start/End: Original strand, 44293780 - 44293845
Alignment:
Q  256 tcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagt 325  Q
    ||||||||||||| ||||| ||||||||| ||    ||||||||||||||||||| |||||| |||||||    
T  44293780 tcctttaagtttgtggtttgtaacaaattagt----taagttattttggtcacacataagttctttaagt 44293845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 376 - 452
Target Start/End: Complemental strand, 44293941 - 44293865
Alignment:
Q  376 tgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaag 452  Q
    |||||||||||   || ||||| || |||||  ||||||||||||||| | |||| |||||||||||||||||||||    
T  44293941 tgtttggttaaagaaaggactaaatagaaaatgtttacaaacttaaagtatttatttgtgaccaaaataacttaaag 44293865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 290 - 333
Target Start/End: Original strand, 29019342 - 29019385
Alignment:
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||||||||||||||| |||||  |||||||||||||||    
T  29019342 tttaagttattttggtcacacataagtcctttaagtttgtaaac 29019385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 334
Target Start/End: Complemental strand, 41666422 - 41666343
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
    |||||||||||||||||||| ||||| ||| |||  ||||||||||| | |||||| |||||  || ||||| |||||||    
T  41666422 gtcctttaagtttgaggtttgtaacagatttgtcccttaagttatttcgatcacacataagtccttaaagttggtaaaca 41666343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 492 - 569
Target Start/End: Original strand, 3198459 - 3198537
Alignment:
Q  492 tgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaaggttattcggtgtaacttagcctaaaaa 569  Q
    |||||| ||||||||||||| ||| ||||||||| | || |||||||||||||   || ||||||| ||||||||||||    
T  3198459 tgtgaccaaaataacttaaataaccaatttattatagacctcaaacttaaaggacctttggtgtaatttagcctaaaaa 3198537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 368 - 422
Target Start/End: Complemental strand, 22026464 - 22026410
Alignment:
Q  368 ttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaa 422  Q
    |||||||| |||||||||||| || ||||| ||| ||||| ||||||||||||||    
T  22026464 ttttgtaacgtttggttaacataaggactaaattaaaaacgtttacaaacttaaa 22026410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 22750355 - 22750449
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgt 329  Q
    ||||||||| |||||||  |||| ||||| |||||||||| ||| | |||| |||||||| ||||||| |||| || ||| |  |||||||||||    
T  22750355 gttattttggtcacacataagtcatttaattttgaggtttgtaatatattgatcatttaaattatttttgtcatacataaatcttttaagtttgt 22750449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 357 - 451
Target Start/End: Original strand, 23164048 - 23164142
Alignment:
Q  357 cacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaa 451  Q
    ||||||||| |||||||||  |||| ||||||  || | || ||||||||  | |||||||||||| ||||||||||||| ||| | ||||||||    
T  23164048 cacatcatcgtttttgtaacatttgattaacaacataaataaattgaaaatgtatacaaacttaaataacttatgtgtgaacaatacaacttaaa 23164142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 487
Target Start/End: Original strand, 29710585 - 29710659
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    ||||||||||  |||||||||| ||||||||||| |||| || |||| | |||||||| ||||| ||||| ||||    
T  29710585 caaacttaaatgacttatgtgttaccaaaataacctaaaagaccaatctgttacaaacgtcaaacttaaaggact 29710659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 482
Target Start/End: Complemental strand, 40081256 - 40081194
Alignment:
Q  420 aaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||| |||||||| |||||||||||||||| ||||||| | |||||| ||| ||| |||||    
T  40081256 aaagaatttatgtgtaaccaaaataacttaaatgatcaatctattacaacccttaaacttaaa 40081194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 451
Target Start/End: Original strand, 42313056 - 42313094
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaa 451  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  42313056 caaatttaaaggacttatgtgtgaccaaaataacttaaa 42313094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 542
Target Start/End: Complemental strand, 46713342 - 46713272
Alignment:
Q  473 caaatttaaatgacttatatgtgactaaaataacttaaaa-acaaatttattacaaacgtcaaacttaaag 542  Q
    |||||||||| ||||||| ||| | |||||||| |||||  || |||||||||||||| ||||||||||||    
T  46713342 caaatttaaaggacttatgtgttattaaaataatttaaatgactaatttattacaaacttcaaacttaaag 46713272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 315
Target Start/End: Original strand, 6222079 - 6222198
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||||| |||| | |||||||||| |||| || ||||||||   |||||  |||||||  |||| ||||||||| |  ||| ||||| ||| || |||    
T  6222079 gtcctttaagtttaaggtttgtaatatattggtcttttaagtt---attttagtcacacataagtc-tttaagtttaaaatttgtaacagattagttatt 6222174  T
Q  292 taagttattttggtcacacgtaag 315  Q
    ||||||||||||||||||| ||||    
T  6222175 taagttattttggtcacacataag 6222198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 11975779 - 11975706
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||||||||||||| |||  |||| ||||||| ||||||||||||| || |||  |||||  ||||||||||    
T  11975779 gtcctttaagtttgagatttgaaacagattggtcctttaagttatttttgtaacagataagtcctttaagtttg 11975706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 413 - 482
Target Start/End: Original strand, 11975706 - 11975775
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||| |||||| ||| || |||||||||||||||| |||| | || |||| |||||| |||||    
T  11975706 caaacttaaaggacttatctgttacaaaaataacttaaaggaccaatctgtttcaaatctcaaacttaaa 11975775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 415 - 512
Target Start/End: Complemental strand, 30662284 - 30662188
Alignment:
Q  415 aacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaa 512  Q
    |||||||||| ||||||||| |  ||||||| ||||| ||||||| | ||| ||| |||||| ||||| ||||||| ||| |  ||||||||||||||    
T  30662284 aacttaaaga-cttatgtgtaattaaaataatttaaatgatcaatctgttataaatctcaaacttaaaggacttatgtgtaatcaaaataacttaaaa 30662188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 413 - 482
Target Start/End: Complemental strand, 30869481 - 30869412
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||| |||| ||||| ||||||||||||| | ||| ||||   |||||||||||||| |||||    
T  30869481 caaacttaaaggacttgtgtgtaaccaaaataactttagggaccaatcgattacaaacctcaaacttaaa 30869412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 413 - 482
Target Start/End: Complemental strand, 40951703 - 40951635
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||||||| ||||||| ||||| |||||||||||||| ||||||| |  |||||| |||||| |||||    
T  40951703 caaacttaaa-aacttatttgtgagcaaaataacttaaatgatcaatctactacaaatctcaaacttaaa 40951635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 2e-54; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 190 - 543
Target Start/End: Original strand, 21598442 - 21598782
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| |||||| |||| ||| | |||| || ||||||||   |||||| |  ||||  ||||||||||||||||||||| ||||| |||||||     
T  21598442 gggtcctttaagtttgaggtttataacagattggtcctttaagtt---attttggttgcacataagtcctttaagtttgaggtttgtaacagattggtcc 21598538  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacag 389  Q
    |||||||||||||| || ||| |||||  ||||||||| |||||        |||||||||||||||||||||||          ||||||||||||||     
T  21598539 tttaagttattttgatcccacataagtcctttaagtttataaac-gttttcgatttagtccttctaccacatcat----------atgtttggttaacat 21598627  T
Q  390 aatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgactta 489  Q
    || ||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||| |||| ||||| ||||||    
T  21598628 aaggactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatatgttacaaaccacaaacttaaaggactta 21598727  T
Q  490 tatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    | || ||  |||||||||||||  || ||| | |||||||| |||||||||||||    
T  21598728 tgtgagaacaaaataacttaaaggaccaatctgttacaaacctcaaacttaaagg 21598782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 190 - 482
Target Start/End: Original strand, 35225395 - 35225683
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| |||||| |||||||| |||||| || ||||||||   |||||| ||| |||  | |||||||||||| |||||| ||||| |||||||     
T  35225395 gggtcctttaagtttgaggtttgtaacaaattggtcctttaagtt---attttggtcatacataaatcctttaagtttaaggtttgtaacagattggtcc 35225491  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacag 389  Q
    ||||||||||| || |||||| |||||| |||||||||||||||        |||||| |||||| ||||||||||||||||||||||||| |||||||     
T  35225492 tttaagttattctgatcacacataagttctttaagtttgtaaac-gttttcgatttaggccttctgccacatcatcatttttgtaatgtttagttaacaa 35225590  T
Q  390 aatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    || ||||| |||||| || |||||||||||| || | ||||||||||| ||||||||| ||| ||||||| | ||||||| | |||| |||||    
T  35225591 aaggactaaattgaatacgtttacaaacttataggaattatgtgtgacaaaaataactcaaatgatcaatttattacaaatcccaaacttaaa 35225683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 342 - 543
Target Start/End: Complemental strand, 24059868 - 24059668
Alignment:
Q  342 atttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaa 441  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||| |||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||    
T  24059868 atttagtccttctgccacatcatcatttttgtaacttttggttaatagaaggactagattaaaaacgtttacaaacttaaaggacttatgtgtgaccaaa 24059769  T
Q  442 ataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaaacaaatttattacaaacgtcaaacttaaa 541  Q
    |||| ||||| ||||||| | ||| |||||||||| ||||| ||||||| || | | ||| |||||||||| | ||| | |||||||| |||||||||||    
T  24059768 ataatttaaatgatcaatctgttataaacctcaaacttaaaggacttatgtggggccaaagtaacttaaaatc-aatatgttacaaacctcaaacttaaa 24059670  T
Q  542 gg 543  Q
    ||    
T  24059669 gg 24059668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 378 - 574
Target Start/End: Complemental strand, 17137011 - 17136814
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaat 477  Q
    ||||||||||| || ||||| ||||||||| ||||||||||||||  |||||||||||||||||||||||||||| || ||| | ||||||||||||||     
T  17137011 tttggttaacaaaaggactaaattgaaaacgtttacaaacttaaaagacttatgtgtgaccaaaataacttaaagaattaatctgttacaaacctcaaac 17136912  T
Q  478 ttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaaggttattcggtgtaacttagcctaaaaaataat 574  Q
    ||||||||||||| || ||| |||||||||||||  || ||| |||||||||| ||||| |||||||   |  ||||||| ||||||||| |||||||    
T  17136911 ttaaatgacttatgtgagaccaaaataacttaaaggactaatctattacaaacctcaaatttaaaggacctctggtgtaatttagcctaataaataat 17136814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 290 - 543
Target Start/End: Complemental strand, 364241 - 363988
Alignment:
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnn-atttagtccttctaccacatcatcatttttgtaatgtttggttaaca 388  Q
    ||||||||||||||||||||| |||||  |||||||||||||| |        ||||||||||| | |||||||||||||||||||| |||||||||| |    
T  364241 tttaagttattttggtcacacataagtcttttaagtttgtaaaaatattttcgatttagtccttatgccacatcatcatttttgtaacgtttggttaata 364142  T
Q  389 gaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgactt 488  Q
    |||||| ||  |||||||  |||||||||||||||||||||| ||||||||||| ||||||||  |||||| | |||||||||| ||| ||||| |||||    
T  364141 gaatgattaagttgaaaatgtttacaaacttaaagaacttatttgtgaccaaaacaacttaaa-aatcaatctgttacaaaccttaaacttaaaggactt 364043  T
Q  489 atatgtgactaaaataacttaaaaacaaatttattacaaacgtcaaacttaaagg 543  Q
     | | | || ||||||| ||||| |   || |||||||||| | |||||||||||    
T  364042 ctgtttaaccaaaataatttaaagaatcatctattacaaacttaaaacttaaagg 363988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 236 - 543
Target Start/End: Original strand, 9982710 - 9983006
Alignment:
Q  236 ttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacan 335  Q
    ||||||||||||||||  ||||||||||||||||| ||| ||||| |||| || ||| ||||||||||||| ||| |||||  |||||||||||||||      
T  9982710 ttattttgatcacacataagtcctttaagtttgagttttgtaacagattgatcctttgagttattttggtcgcacataagtcttttaagtttgtaaac-g 9982808  T
Q  336 nnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtg 435  Q
          |||||||||||||  ||||||||| ||||          ||||||||||| ||||| |||||||| ||| |||||||||||| ||||||||| |    
T  9982809 ttttcaatttagtccttctgtcacatcatcgtttt----------ggttaacagaaggactaaattgaaaagttt-acaaacttaaaggacttatgtgag 9982897  T
Q  436 accaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaa 534  Q
    || |||| ||||||||||| |||||| ||||||||   ||| ||||| ||||||| |||||| |||||||||||||  |  ||||| |||||| | ||||    
T  9982898 acaaaaagaacttaaaggaccaatatgttacaaactctaaacttaaaggacttatgtgtgaccaaaataacttaaaggatcaatttgttacaatcctcaa 9982997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 387 - 511
Target Start/End: Original strand, 17342620 - 17342744
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||| ||| || |||||||||||||| ||||| |||    
T  17342620 cagaatgactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccgaaataacttaaaggaccaacatgttacaaacctcaaacttaaaagac 17342719  T
Q  487 ttatatgtgactaaaataacttaaa 511  Q
    |||| | | || |||||||||||||    
T  17342720 ttatgtattaccaaaataacttaaa 17342744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 378 - 543
Target Start/End: Original strand, 10356432 - 10356598
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaat 477  Q
    ||||||||||| || || || |||||||| |||||||||||||||| ||||||||||| | ||||||||||||| || |||| | ||||||| ||||||     
T  10356432 tttggttaacataaggattaaattgaaaagttttacaaacttaaaggacttatgtgtggcaaaaataacttaaaagaccaatctgttacaaatctcaaac 10356531  T
Q  478 ttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||| ||||||| ||| || |||||||| ||||  || ||| | ||||||||||||||||||||||    
T  10356532 ttaaaggacttatgtgttaccaaaataacctaaaggaccaatctgttacaaacgtcaaacttaaagg 10356598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 402 - 543
Target Start/End: Complemental strand, 35225541 - 35225399
Alignment:
Q  402 gaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaa 501  Q
    |||||| |||||||||||||||||||||||||||| || |||||||||||||| |||| | |||||||||| ||| ||||| || |||| | |||| |||    
T  35225541 gaaaacgtttacaaacttaaagaacttatgtgtgatcagaataacttaaaggaccaatctgttacaaaccttaaacttaaaggatttatgtatgaccaaa 35225442  T
Q  502 ataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||||||||  || ||||| |||||||| |||||||||||||    
T  35225441 ataacttaaaggaccaatttgttacaaacctcaaacttaaagg 35225399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 386 - 511
Target Start/End: Complemental strand, 9982829 - 9982704
Alignment:
Q  386 acagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatga 485  Q
    |||||| ||||| ||||||||| ||||||||||||||  ||||||||| ||||||||||||| ||||||||||| | ||||||| |||||| ||||| ||    
T  9982829 acagaaggactaaattgaaaacgtttacaaacttaaaagacttatgtgcgaccaaaataactcaaaggatcaatctgttacaaaactcaaacttaaagga 9982730  T
Q  486 cttatatgtgactaaaataacttaaa 511  Q
    ||||| |||||  ||||||| |||||    
T  9982729 cttatgtgtgatcaaaataatttaaa 9982704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 190 - 333
Target Start/End: Complemental strand, 21598786 - 21598646
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| |||||| |||||||| | |||| || ||||||||   |||||| || ||||  ||||||||||||||| ||||| ||||| |||||||     
T  21598786 gggtcctttaagtttgaggtttgtaacagattggtcctttaagtt---attttgttctcacataagtcctttaagtttgtggtttgtaacatattggtcc 21598690  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||||||||||||||| |||||  |||||||||||||||    
T  21598689 tttaagttattttggtcacacataagtcctttaagtttgtaaac 21598646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 254 - 451
Target Start/End: Complemental strand, 17342720 - 17342534
Alignment:
Q  254 agtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttc 353  Q
    |||| |||||||||||||||| |||||  |||||| |||||||||||| |||||||| |||||  |||||||||||||||        |||||||| |||    
T  17342720 agtcttttaagtttgaggtttgtaacatgttggtcctttaagttatttcggtcacacataagtcctttaagtttgtaaac-gttttcaatttagtcattc 17342622  T
Q  354 taccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaa 451  Q
    |  ||||||||||||||          ||||||| ||| ||||| |||||||||  |||||||||||||| |||||||||||||| ||||||||||||    
T  17342621 tgacacatcatcatttt----------ggttaacggaaggactaaattgaaaacacttacaaacttaaaggacttatgtgtgaccgaaataacttaaa 17342534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 388 - 543
Target Start/End: Complemental strand, 21598602 - 21598446
Alignment:
Q  388 agaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    |||| ||||| || |||||| |||| |||||||||| ||||||||| || ||||||||||||||||| |||| | |||||||||||||| ||||| ||||    
T  21598602 agaaggactaaatcgaaaacgtttataaacttaaaggacttatgtgggatcaaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggact 21598503  T
Q  488 tatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||| ||  || |||||||||||||  || ||| | ||| |||| |||||||||||||    
T  21598502 tatgtgcaaccaaaataacttaaaggaccaatctgttataaacctcaaacttaaagg 21598446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 413 - 543
Target Start/End: Complemental strand, 10356393 - 10356262
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa- 511  Q
    ||||||||||| ||||| |||||||||||||||||||||| | |||| | |||||||  ||||| ||||| ||||||| |||||| ||||||| |||||     
T  10356393 caaacttaaaggacttaagtgtgaccaaaataacttaaagaaccaatctgttacaaatatcaaacttaaaggacttatgtgtgaccaaaataatttaaag 10356294  T
Q  512 aacaaatttattacaaacgtcaaacttaaagg 543  Q
     || ||||| |||||||| |||||||||||||    
T  10356293 gactaatttgttacaaacctcaaacttaaagg 10356262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 254 - 333
Target Start/End: Original strand, 24059723 - 24059802
Alignment:
Q  254 agtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||| |||||  |||||||||||||||    
T  24059723 agtcctttaagtttgaggtttataacagattgatcatttaaattattttggtcacacataagtcctttaagtttgtaaac 24059802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 190 - 333
Target Start/End: Complemental strand, 9983010 - 9982870
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| |||||| | |||||| ||||||||| ||||||||   |||||| |||||||  ||||||||||||||   |||| ||||| |||||||     
T  9983010 gggtcctttaagtttgaggattgtaacaaattgatcctttaagtt---attttggtcacacataagtcctttaagtttagagtttgtaacatattggtcc 9982914  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    |||||||| |||| ||| ||| |||||  |||||||||||||||    
T  9982913 tttaagttctttttgtctcacataagtcctttaagtttgtaaac 9982870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 191 - 505
Target Start/End: Original strand, 13273066 - 13273362
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcat 290  Q
    ||||||||| |||||| |||||||||| |||| || ||| | ||   |||||| ||| |||  ||| ||||||||||||||||||||||| ||||   ||    
T  13273066 ggtcctttaagtttgatgtttgtaatagattggtcttttgaatt---attttggtcatacataagttctttaagtttgaggtttataacagattg---at 13273159  T
Q  291 ttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacaga 390  Q
    || ||||||||||||| ||| |||||| ||||||||||||||||       ||||||||  ||| | ||| |||| |          |||||||| || |    
T  13273160 tttagttattttggtcccacataagttatttaagtttgtaaaca-ttttcaatttagtctgtctgcgacaacatcgt----------tttggttagcata 13273248  T
Q  391 atgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttat 490  Q
    |  |||| ||||||||  || |||||||||||||||||||||||||| ||||||||||||| || |||| | ||||||| || ||| ||||| || ||||    
T  13273249 aaaactaaattgaaaaagttcacaaacttaaagaacttatgtgtgacaaaaataacttaaatgaccaatctgttacaaa-ctaaaacttaaaggatttat 13273347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 393 - 543
Target Start/End: Complemental strand, 13273217 - 13273069
Alignment:
Q  393 gactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatat 492  Q
    ||||| ||||||||  |||||||||||||| |||||||||| ||||||||||||| ||   |||||| | ||| |||||||||| |||||  |||||| |    
T  13273217 gactaaattgaaaatgtttacaaacttaaataacttatgtgggaccaaaataactaaa---atcaatctgttataaacctcaaacttaaagaacttatgt 13273121  T
Q  493 gtgactaaaataacttaaaa-acaaatttattacaaacgtcaaacttaaagg 543  Q
     |||| ||||||| | |||| || ||| |||||||||| |||||||||||||    
T  13273120 atgaccaaaataattcaaaagaccaatctattacaaacatcaaacttaaagg 13273069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 190 - 328
Target Start/End: Original strand, 10356258 - 10356393
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| |||||| |||||||| |||||  || ||||| ||   |||||| |||||||  ||||||||||||||||  ||| ||||| ||||||      
T  10356258 gggtcctttaagtttgaggtttgtaacaaattagtcctttaaatt---attttggtcacacataagtcctttaagtttgatatttgtaacagattggttc 10356354  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||||||||||||| |||||  ||||||||||    
T  10356355 tttaagttattttggtcacacttaagtcctttaagtttg 10356393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 191 - 332
Target Start/End: Complemental strand, 10356601 - 10356463
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcat 290  Q
    ||||||||| |||||| |||||||| | |||| || |||| |||   |||||| | |||||  ||||||||||||||||| ||| ||||| ||||||| |    
T  10356601 ggtcctttaagtttgacgtttgtaacagattggtcctttaggtt---attttggtaacacataagtcctttaagtttgagatttgtaacagattggtctt 10356505  T
Q  291 ttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    |||||||||||| | ||||| |||||  ||||||||||||||    
T  10356504 ttaagttatttttgccacacataagtcctttaagtttgtaaa 10356463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 380 - 482
Target Start/End: Original strand, 2761574 - 2761676
Alignment:
Q  380 tggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaattt 479  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||| | |||||||||| ||||||||| |||| || |||| | ||| |||  ||||||||    
T  2761574 tggttaacagaaggactaaattgaaaacgtttacaaacttaaaggatttatgtgtgatcaaaataacctaaaagaccaatttattataaatttcaaattt 2761673  T
Q  480 aaa 482  Q
    |||    
T  2761674 aaa 2761676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 413 - 482
Target Start/End: Complemental strand, 9982742 - 9982673
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||| |||||||||||| |||||||| ||||||||| ||||| |||||||||||||| |||||    
T  9982742 caaacttaaaggacttatgtgtgatcaaaataatttaaaggatgaatatgttacaaacctcaaacttaaa 9982673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 2761559 - 2761495
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaa 451  Q
    ||||| ||||| ||||||||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  2761559 cagaaggactaaattgaaaacgtttacaaacttaaaggacttatgtgtgatcaaaataacttaaa 2761495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 191 - 333
Target Start/End: Original strand, 17136842 - 17136981
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcat 290  Q
    |||||||||  ||||| |||||||||| |||  || ||||||||   |||||| || ||||  |||| |||||||||||||||| ||||| |||  |  |    
T  17136842 ggtcctttaaatttgaggtttgtaatagattagtcctttaagtt---attttggtctcacataagtcatttaagtttgaggtttgtaacagattaattct 17136938  T
Q  291 ttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    |||||||||||||||||||| |||||  |||||||||||||||    
T  17136939 ttaagttattttggtcacacataagtcttttaagtttgtaaac 17136981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 414 - 482
Target Start/End: Original strand, 35050847 - 35050915
Alignment:
Q  414 aaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||||||| ||||||| |||||| |||||||||||||||||||| | |||||||||||||| |||||    
T  35050847 aaacttaaaggacttatgcgtgacctaaataacttaaaggatcaatttattacaaacctcaaacttaaa 35050915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 194 - 311
Target Start/End: Complemental strand, 35050917 - 35050803
Alignment:
Q  194 cctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcattta 293  Q
    |||||| |||||| |||||||||||||||||| ||||||||   |||| | |||| ||  |||||||||||||| | |||| ||||| ||||||| ||||    
T  35050917 cctttaagtttgaggtttgtaataaattgatcctttaagtt---atttaggtcacgcataagtcctttaagtttaaagtttgtaacagattggtccttta 35050821  T
Q  294 agttattttggtcacacg 311  Q
    |||||||| ||| |||||    
T  35050820 agttatttaggtaacacg 35050803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 408 - 482
Target Start/End: Original strand, 364198 - 364271
Alignment:
Q  408 ttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||||||||||||  ||||||||||||||||||||||||||| ||||||| | |||||||  |||||||||||    
T  364198 ttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gatcaatctattacaaatatcaaatttaaa 364271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 13273342 - 13273270
Alignment:
Q  256 tcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgt 329  Q
    |||||||||||| || ||| ||||| ||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  13273342 tcctttaagttttag-tttgtaacagattggtcatttaagttatttttgtcacacataagttctttaagtttgt 13273270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 413 - 482
Target Start/End: Original strand, 35050731 - 35050800
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||||||||||||||||||||| | ||||||||||||||| |||| | |||||||||| ||| |||||    
T  35050731 caaacttaaagaacttatgtgtgatcgaaataacttaaaggaccaatctgttacaaaccttaaacttaaa 35050800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 367 - 482
Target Start/End: Complemental strand, 3848666 - 3848551
Alignment:
Q  367 tttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttac 466  Q
    |||||||||  ||||||||||| || ||||| ||||||| | |||||||||||||||   |||| ||| | |||| ||||||||| || | || ||||||    
T  3848666 tttttgtaacatttggttaacaaaaggactaaattgaaaccgtttacaaacttaaaggtattatatgtaagcaaactaacttaaatgacctattttttac 3848567  T
Q  467 aaacctcaaatttaaa 482  Q
    |||||||||| |||||    
T  3848566 aaacctcaaacttaaa 3848551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 35050802 - 35050731
Alignment:
Q  257 cctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||| |||||| ||||| ||||||| |||||||||||| | |||||| |||||| ||||||||||    
T  35050802 cctttaagtttaaggtttgtaacagattggtcctttaagttatttcgatcacacataagttctttaagtttg 35050731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 431 - 545
Target Start/End: Original strand, 35050804 - 35050919
Alignment:
Q  431 gtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaac 529  Q
    |||| ||| ||||||||||||||| |||| | |||||||| | ||| ||||| |||||||  |||||  ||||||||||||  |  ||||||||||||||    
T  35050804 gtgttacctaaataacttaaaggaccaatctgttacaaactttaaacttaaaggacttatgcgtgacctaaataacttaaaggatcaatttattacaaac 35050903  T
Q  530 gtcaaacttaaaggtt 545  Q
     |||||||||||||||    
T  35050904 ctcaaacttaaaggtt 35050919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 413 - 482
Target Start/End: Original strand, 17342706 - 17342775
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||  |||||||| | ||||||||||||||||||| ||| || |||||||||||||| |||||    
T  17342706 caaacttaaaagacttatgtattaccaaaataacttaaaggaccaacatgttacaaacctcaaacttaaa 17342775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 254 - 334
Target Start/End: Original strand, 364044 - 364123
Alignment:
Q  254 agtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
    |||||||||||||| |||||| ||||| |||| |  |||||||| |||||||||||  |||||| ||||||||||||||||    
T  364044 agtcctttaagtttaaggtttgtaacagattgatt-tttaagttgttttggtcacaaataagttctttaagtttgtaaaca 364123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 237 - 300
Target Start/End: Complemental strand, 19557935 - 19557872
Alignment:
Q  237 tattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttatt 300  Q
    ||||||| |||||||  |||| |||||||||||||||||||||| || |||| |||||||||||    
T  19557935 tattttggtcacacataagtcttttaagtttgaggtttataacagatcggtcctttaagttatt 19557872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 255 - 333
Target Start/End: Complemental strand, 2761680 - 2761602
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||| |||||  ||||||| ||||||||| |||| ||||||||| |||||| ||| |  |||||||||||||||    
T  2761680 gtcctttaaatttgaaatttataataaattggtcttttaggttattttgatcacacataaatcctttaagtttgtaaac 2761602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 17342776 - 17342706
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||||||||| |||||  |||||| |||||||||||||||| | || |||||  ||||||||||    
T  17342776 ctttaagtttgaggtttgtaacatgttggtcctttaagttattttggtaatacataagtcttttaagtttg 17342706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 35050917 - 35050847
Alignment:
Q  257 cctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagttt 327  Q
    |||||||||||||||||| ||| |||||| || |||||||||||| |||||| | |||||  |||||||||    
T  35050917 cctttaagtttgaggtttgtaataaattgatcctttaagttatttaggtcacgcataagtcctttaagttt 35050847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 488
Target Start/End: Complemental strand, 13812342 - 13812241
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    ||||||||||| || |||||| |||||||| |||||  |||||||||| | |||||||| ||| || |  ||| | ||| |||||||||| |||||||||    
T  13812342 cagaatgactaaatcgaaaacatttacaaatttaaatgacttatgtgttaacaaaataatttatagaactaatttgttataaacctcaaacttaaatgac 13812243  T
Q  487 tt 488  Q
    ||    
T  13812242 tt 13812241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 367 - 451
Target Start/End: Complemental strand, 31091345 - 31091261
Alignment:
Q  367 tttttgtaatgtttggttaacagaa-tgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaa 451  Q
    |||||||||||| ||||||||| ||  ||||| ||||||||| |||||||| ||||| || |||||| ||| ||||||||||||||    
T  31091345 tttttgtaatgtatggttaacaaaaccgactaaattgaaaacgtttacaaatttaaa-aatttatgtttgatcaaaataacttaaa 31091261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 3848547 - 3848595
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttg 303  Q
    |||||||||||||||||||| ||| |||| |||||||||||||| ||||    
T  3848547 gtcctttaagtttgaggtttgtaaaaaataggtcatttaagttagtttg 3848595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 387 - 454
Target Start/End: Complemental strand, 35050694 - 35050627
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaagga 454  Q
    ||||| ||||| || |||||| |||| |||||||||  | ||||||||||| ||||||||||||||||    
T  35050694 cagaaggactaaatcgaaaacgtttataaacttaaaagatttatgtgtgacaaaaataacttaaagga 35050627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 13812242 - 13812320
Alignment:
Q  254 agtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    |||| |||||||||||||||||||||||||| ||  | ||| |||||||| | |||| |||||  ||||| ||||||||    
T  13812242 agtcatttaagtttgaggtttataacaaattagttctataaattattttgttaacacataagtcatttaaatttgtaaa 13812320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 259 - 328
Target Start/End: Original strand, 9982673 - 9982742
Alignment:
Q  259 tttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||||||||||||| ||||| |||  || ||||| |||||||| |||||| |||||  ||||||||||    
T  9982673 tttaagtttgaggtttgtaacatattcatcctttaaattattttgatcacacataagtcctttaagtttg 9982742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 413 - 470
Target Start/End: Original strand, 19557904 - 19557961
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaac 470  Q
    ||||||||||  ||||||||||||||||||||  |||||||| |||| | ||||||||    
T  19557904 caaacttaaaagacttatgtgtgaccaaaatattttaaaggaccaatctgttacaaac 19557961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 1e-52; HSPs: 122)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 191 - 512
Target Start/End: Complemental strand, 1996492 - 1996175
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcat 290  Q
    |||| |||| |||||| |||||||||| |||| |||||||   || ||||||| || || |  ||||||||||||||||||||| ||| | |||| || |    
T  1996492 ggtcttttaagtttgaggtttgtaatagattggtcattta---tgatattttggtctcagataagtcctttaagtttgaggtttgtaagagattgttcct 1996396  T
Q  291 ttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacaga 390  Q
    |||| ||||||||||||| | ||||   |||||||||||||  |       |||||||| |||| |||||||||  ||||||||||||||||||| || |    
T  1996395 ttaaattattttggtcactcataagccatttaagtttgtaaggattttcg-atttagtcattctgccacatcattgtttttgtaatgtttggttatcaaa 1996297  T
Q  391 atgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttat 490  Q
    | ||||| ||||||||| |||||||||||| || ||||||||||||||||||||||||||||||  ||| | ||||||||| |||| ||||| || ||||    
T  1996296 aagactaaattgaaaacgtttacaaacttataggacttatgtgtgaccaaaataacttaaaggactaatctattacaaaccccaaacttaaaggatttat 1996197  T
Q  491 atgtgactaaaataacttaaaa 512  Q
    ||||||| ||||||||||||||    
T  1996196 atgtgaccaaaataacttaaaa 1996175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 193 - 543
Target Start/End: Complemental strand, 16327434 - 16327099
Alignment:
Q  193 tcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcattt 292  Q
    ||||||| |||||| |||||||||| ||| |||||||||||| ||  || ||   ||||  ||||||||||||||||||||| ||||| |||| || |||    
T  16327434 tcctttaagtttgaggtttgtaatagattaatcatttaagttatt--ttaga---cacataagtcctttaagtttgaggtttgtaacagattgatccttt 16327340  T
Q  293 aagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaat 392  Q
    |||||||||||||||||  |||||  |||||||||||||||        ||||||||||||| |||||||||| ||||          |||||||| ||     
T  16327339 aagttattttggtcacaaataagtactttaagtttgtaaac-gttttcaatttagtccttctgccacatcatcgtttt----------ggttaacataag 16327251  T
Q  393 gactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatat 492  Q
    ||||| ||||||||| ||||||||||||||| |||||||||| |||||||||||||||| || |||| | |||||||||||||| ||||| ||||||| |    
T  16327250 gactaaattgaaaacgtttacaaacttaaaggacttatgtgttaccaaaataacttaaacgaccaatctgttacaaacctcaaacttaaaggacttatgt 16327151  T
Q  493 gtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    | |||||||||||||||||  |  ||| |||||||||| || ||||||||||    
T  16327150 gcgactaaaataacttaaacgatcaatctattacaaacctctaacttaaagg 16327099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 190 - 475
Target Start/End: Original strand, 5746091 - 5746374
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaa-ttgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtc 288  Q
    ||||||||||  |||||||||| ||| ||| ||| |||||||||||   |||||| |||||||  ||| |||||| |||||||||||||||| |||||||    
T  5746091 gggtcctttaattttgaagtttataaaaaaattggtcatttaagtt---attttggtcacacataagttctttaaatttgaggtttataacagattggtc 5746187  T
Q  289 atttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatca-tttttgtaatgtttggttaac 387  Q
    ||||||||||||||||| | || |||||  |||||||||||||||        ||||||| |||||||||||||||   ||||||||| |||||||||||    
T  5746188 atttaagttattttggtaaaacataagtcctttaagtttgtaaac-gttttttatttagttcttctaccacatcatttgtttttgtaacgtttggttaac 5746286  T
Q  388 agaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaa 475  Q
    |||| ||||| ||| ||||| ||||||||||||||  |||||||| |||||||||||| ||||| ||| ||| | |||||||||||||    
T  5746287 agaaagactaaattaaaaacgtttacaaacttaaatgacttatgtatgaccaaaataatttaaaagattaatttgttacaaacctcaa 5746374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 192 - 543
Target Start/End: Complemental strand, 35461774 - 35461437
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||||| |||||| |||||||||| |||| || ||||||||   |||||| |||||||  |||| ||||| |||||| ||| ||||| |||| |||||    
T  35461774 gtcctttaagtttgaggtttgtaatagattggtcctttaagtt---attttggtcacacataagtcatttaattttgagatttgtaacagattgatcatt 35461678  T
Q  292 taagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaa 391  Q
    ||||||||||| ||||||  ||| |  |||||||||||||||        ||| |||| ||||||||||||||           ||||||||||| | ||    
T  35461677 taagttatttttgtcacaaataactcttttaagtttgtaaacgctttcatatt-agtcattctaccacatcat-----------tgtttggttaatataa 35461590  T
Q  392 tgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttata 491  Q
     ||||| || |||||||||||||||||||||| |||||| ||||| |||||||| |||||||| |||| | |||||||| ||||| ||| | |||||||     
T  35461589 ggactaaatcgaaaacttttacaaacttaaaggacttatttgtgatcaaaataatttaaaggaccaatctgttacaaacttcaaacttacaggacttatg 35461490  T
Q  492 tgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    |||||| |||||||||||||  || ||| |||||||||| |||||||||||||    
T  35461489 tgtgaccaaaataacttaaaggaccaatatattacaaacctcaaacttaaagg 35461437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 192 - 539
Target Start/End: Complemental strand, 17400885 - 17400550
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||||| ||||||  ||||||| | |||| |||||||||||   ||||||||||||||  ||||||||||||||||| ||| ||||| ||||||| |     
T  17400885 gtcctttaagtttgagatttgtaacatattggtcatttaagtt---attttgatcacacataagtcctttaagtttgagttttgtaacagattggtcctg 17400789  T
Q  292 taagttattttggtcacacg--taagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacag 389  Q
    |||||| ||||||||||||   |||||  ||||| |||||||||        |||||||||||||||||||||||      |||    |||||||||| |    
T  17400788 taagttgttttggtcacacacataagtcctttaaatttgtaaac-gttttcaatttagtccttctaccacatcat------tgt----tttggttaactg 17400700  T
Q  390 aatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgactta 489  Q
    ||  |||| ||||||||| ||| ||| ||||||| ||||||||| || ||||| ||||||||||| |||| | |||||||  ||||| ||||| ||||||    
T  17400699 aagaactaaattgaaaacgtttgcaaccttaaaggacttatgtgagatcaaaagaacttaaaggaccaatttgttacaaatttcaaacttaaaagactta 17400600  T
Q  490 tatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaactta 539  Q
    | |||||| ||||||||||||| ||| ||||||||||| || |||||||||    
T  17400599 tgtgtgac-aaaataacttaaagaaccaatttattacacacctcaaactta 17400550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 387 - 543
Target Start/End: Original strand, 16327278 - 16327433
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    ||||| ||||| ||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||| | |||||||||||||| ||||| |||    
T  16327278 cagaaggactaaattgaaaacgtttacaaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacttaaaggac 16327377  T
Q  487 ttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    |  |||||| |||||||||||||||  |  ||| |||||||||| |||||||||||||    
T  16327378 t--tatgtgtctaaaataacttaaatgattaatctattacaaacctcaaacttaaagg 16327433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 235 - 541
Target Start/End: Original strand, 10827146 - 10827440
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
    ||||||||| |||||||  |||| |||||||||||| ||| ||||| ||||||| ||||||||||||||||||||  || ||  |||||||||||||||     
T  10827146 gttattttggtcacacataagtcttttaagtttgagttttgtaacagattggtc-tttaagttattttggtcacattta-gtcctttaagtttgtaaac- 10827242  T
Q  335 nnnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgt 434  Q
           ||||||||||||||||||||||| ||||           ||||||  ||| ||||| || |||||| ||||||||||||||| |||| | |||    
T  10827243 ggtttagatttagtccttctaccacatcattattt-----------ggttaatggaaggactaaatcgaaaacgtttacaaacttaaaggacttgtttgt 10827331  T
Q  435 gaccaaaataacttaaaggatcaatattttacaaacctcaaa-tttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtc 532  Q
    ||||||||||| ||||||||||||| | ||||||| |||||| || ||| |||||||  ||||| |||| ||||||||  || |||||||||||||| ||    
T  10827332 gaccaaaataatttaaaggatcaatctgttacaaaactcaaacttaaaaggacttatgagtgaccaaaacaacttaaaggaccaatttattacaaacctc 10827431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 399 - 543
Target Start/End: Complemental strand, 28559381 - 28559236
Alignment:
Q  399 attgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgact 498  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||| | |||||||||||||| | || ||||||||  || ||     
T  28559381 attgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaactgaattgacttatgcgtaaca 28559282  T
Q  499 aaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    |||||||||||||  || ||| | ||||||||||||||||||||||    
T  28559281 aaaataacttaaaggaccaatctgttacaaacgtcaaacttaaagg 28559236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 378 - 511
Target Start/End: Original strand, 12713055 - 12713190
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaa--gaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaa 475  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||  ||  ||||| ||||||||||||||||||| ||||||||| ||| ||| |||||    
T  12713055 tttggttaacagaatgactaaattgaaaacgtttacaaacttaaaaagactttatgcgtgaccaaaataacttaaaagatcaatatgttagaaatctcaa 12713154  T
Q  476 atttaaatgacttatatgtgactaaaataacttaaa 511  Q
    | ||||| ||||||| |||||| |||||||||||||    
T  12713155 acttaaaggacttatgtgtgacaaaaataacttaaa 12713190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 378 - 511
Target Start/End: Original strand, 12774319 - 12774454
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaa--gaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaa 475  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||  ||  ||||| ||||||||||||||||||| ||||||||| ||| ||| |||||    
T  12774319 tttggttaacagaatgactaaattgaaaacgtttacaaacttaaaaggactttatgcgtgaccaaaataacttaaaagatcaatatgttagaaatctcaa 12774418  T
Q  476 atttaaatgacttatatgtgactaaaataacttaaa 511  Q
    | ||||| ||||||| |||||| |||||||||||||    
T  12774419 acttaaaggacttatgtgtgacaaaaataacttaaa 12774454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 263 - 543
Target Start/End: Original strand, 28559302 - 28559572
Alignment:
Q  263 agtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatc 362  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||  |||||||||||||||        ||||| ||||| |  ||||||    
T  28559302 agtttgaggtttgtaacagattggtcctttaagttattttggtcacacataagtcctttaagtttgtaaac-gttttcaatttaatccttatggcacatc 28559400  T
Q  363 atcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatatt 462  Q
    ||| ||||          | ||||| ||||||||| ||||||||| |||| |||||||||| ||||||||||||| ||||||| |||||||| |||| |     
T  28559401 atcgtttt----------gcttaacggaatgactaaattgaaaacgtttataaacttaaaggacttatgtgtgactaaaataatttaaaggaccaatctg 28559490  T
Q  463 ttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||| |||||||||| ||||| ||||| | |||||| ||||||   ||||  || ||||| |||||||| |||||||||||||    
T  28559491 ttataaacctcaaacttaaaggacttgtgtgtgaccaaaatactataaaggactaatttgttacaaacatcaaacttaaagg 28559572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 357 - 476
Target Start/End: Complemental strand, 7209976 - 7209857
Alignment:
Q  357 cacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatc 456  Q
    ||||||||| |||||||||||||||||||||| ||  |||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||      
T  7209976 cacatcatcgtttttgtaatgtttggttaacataagaactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaatgacg 7209877  T
Q  457 aatattttacaaacctcaaa 476  Q
     || | ||||||||||||||    
T  7209876 tatttattacaaacctcaaa 7209857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 376 - 543
Target Start/End: Complemental strand, 25456444 - 25456277
Alignment:
Q  376 tgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaa 475  Q
    |||||| |||| |||| ||||| || |||||| ||||| ||||||||  |||||| ||||||||||||||||||||||| |||| | |||||||||||||    
T  25456444 tgtttgcttaatagaaggactaaatcgaaaacatttaccaacttaaaagacttatttgtgaccaaaataacttaaaggaccaatctgttacaaacctcaa 25456345  T
Q  476 atttaaatgacttatatgtgactaaaataacttaaaaacaaatttattacaaacgtcaaacttaaagg 543  Q
    | ||||| ||||||| |||||  ||||||||||||  || ||| | |||||||| | |||||||||||    
T  25456344 acttaaaggacttatgtgtgatcaaaataacttaaggaccaatatgttacaaacctaaaacttaaagg 25456277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 190 - 334
Target Start/End: Original strand, 20927842 - 20927983
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    ||||| |||| ||||||  ||||||||| ||||||||||||||||   |||||  | |||||  |||||||||| |||||||||| ||| ||||||||||    
T  20927842 gggtcttttaagtttgagatttgtaatagattgatcatttaagtt---attttagttacacataagtcctttaaatttgaggtttgtaataaattggtca 20927938  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
    |||||||||||||||||||| ||||||  ||||||||||||||||    
T  20927939 tttaagttattttggtcacaagtaagtcttttaagtttgtaaaca 20927983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 388 - 543
Target Start/End: Original strand, 35461616 - 35461772
Alignment:
Q  388 agaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    ||||||||||   ||||| | ||||||||||||||  | |||| |||||| ||||||||||||| ||||||| | ||||||| |||||| ||||||||||    
T  35461616 agaatgactaatatgaaagcgtttacaaacttaaaagagttatttgtgacaaaaataacttaaatgatcaatctgttacaaatctcaaaattaaatgact 35461715  T
Q  488 tatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||| |||||| |||||||||||||  || ||| |||||||||| |||||||||||||    
T  35461716 tatgtgtgaccaaaataacttaaaggaccaatctattacaaacctcaaacttaaagg 35461772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 403 - 542
Target Start/End: Original strand, 25456470 - 25456609
Alignment:
Q  403 aaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaa 502  Q
    |||||||||| |||||||||  | || | ||||||||||||||||||||||| |||| | |||||||||||||| |||||  | |||| |||||||||||    
T  25456470 aaaacttttaaaaacttaaaagaattctttgtgaccaaaataacttaaaggaccaatctattacaaacctcaaacttaaagtatttatgtgtgactaaaa 25456569  T
Q  503 taacttaaaaacaaatttattacaaacgtcaaacttaaag 542  Q
    ||||||||| || ||| | |||||||| ||||||||||||    
T  25456570 taacttaaagaccaatctgttacaaacctcaaacttaaag 25456609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 235 - 447
Target Start/End: Complemental strand, 35813596 - 35813386
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
    ||||||||| | |||||  |||||||||||| |||||||| ||||| ||| ||  |||||||||||||| ||| || |||||  |||||| |||||||      
T  35813596 gttattttggttacacataagtcctttaagtgtgaggtttgtaacagatttgtt-tttaagttattttgctcatacataagtcatttaagattgtaaat- 35813499  T
Q  335 nnnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgt 434  Q
           ||||||| |||||||||||||||| ||||||||   ||||||||| | || ||||| ||||||||| ||||||||||||||| ||||||||||    
T  35813498 gttttcaatttagttcttctaccacatcatcgtttttgtagaatttggttaataaaaagactatattgaaaacgtttacaaacttaaaggacttatgtgt 35813399  T
Q  435 gaccaaaataact 447  Q
    ||| |||||||||    
T  35813398 gactaaaataact 35813386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 202 - 543
Target Start/End: Original strand, 23661888 - 23662215
Alignment:
Q  202 tttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattt 301  Q
    ||||| |||||||| | ||||||| ||||||||   |||||| | |||||  ||||||||||||||||  ||| | ||| |||| |  ||||||||||||    
T  23661888 tttgacgtttgtaacagattgatcttttaagtt---attttggttacacataagtcctttaagtttgatatttgtgacagattgat--tttaagttattt 23661982  T
Q  302 tggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagatt 401  Q
    ||||||||| |||||  |||||||||||||| |       ||||||||| ||| | |||||||| ||||          |||||||| || ||||| |||    
T  23661983 tggtcacacataagtcttttaagtttgtaaa-agttttaaatttagtccatctgcgacatcatcctttt----------ggttaacaaaaggactaaatt 23662071  T
Q  402 gaaaacttttacaaacttaaagaacttatgtgtgaccaaaataactt-aaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaa 500  Q
    |||||||||||||||||| ||| | ||||||  ||| |||||||||| |||| | |||| | ||||||| |||||| |||||  |||||| ||| || ||    
T  23662072 gaaaacttttacaaacttgaaggagttatgtacgacaaaaataacttaaaagaaccaatttgttacaaatctcaaacttaaagaacttatgtgtaaccaa 23662171  T
Q  501 aataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    |||||||||||  || |||||||||||||| |||||||||||||    
T  23662172 aataacttaaaggaccaatttattacaaacctcaaacttaaagg 23662215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 362 - 452
Target Start/End: Complemental strand, 36759786 - 36759696
Alignment:
Q  362 catcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaag 452  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||| ||||||  ||||||||||||| ||||||    
T  36759786 catcatttttgtaatgtttggttaacataatgactaaattgaaaacatttacaaacttaaaggacttataagtgaccaaaataatttaaag 36759696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 382 - 511
Target Start/End: Complemental strand, 20928008 - 20927879
Alignment:
Q  382 gttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaa 481  Q
    ||||| |||| ||||| || |||||  ||||||||||||||  |||||  |||||||||||||||||||| || |||| | |||||||||||||||||||    
T  20928008 gttaatagaaggactaaatcgaaaatgtttacaaacttaaaagacttacttgtgaccaaaataacttaaatgaccaatttattacaaacctcaaatttaa 20927909  T
Q  482 atgacttatatgtgactaaaataacttaaa 511  Q
    | ||||||| ||| ||||||||||||||||    
T  20927908 aggacttatgtgtaactaaaataacttaaa 20927879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 377 - 508
Target Start/End: Complemental strand, 14604234 - 14604102
Alignment:
Q  377 gtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataac-ttaaaggatcaatattttacaaacctcaa 475  Q
    ||||||||||||||| ||||| ||||| ||  |||||||| |||||| |||||| ||||||||||||||| | ||| ||||||| | |||||||||||||    
T  14604234 gtttggttaacagaaggactaaattgataaaatttacaaatttaaaggacttatatgtgaccaaaataacataaaatgatcaatctgttacaaacctcaa 14604135  T
Q  476 atttaaatgacttatatgtgactaaaataactt 508  Q
    | ||||| ||||||| |||||| ||||||||||    
T  14604134 acttaaaggacttatgtgtgaccaaaataactt 14604102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 191 - 333
Target Start/End: Original strand, 16327096 - 16327235
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcat 290  Q
    ||||||||| ||| || |||||||||| ||||||| ||||||||   |||||  || ||||  ||||||||||||||||||||| ||||| ||||||| |    
T  16327096 ggtcctttaagttagaggtttgtaatagattgatcgtttaagtt---attttagtcgcacataagtcctttaagtttgaggtttgtaacagattggtcgt 16327192  T
Q  291 ttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||||||||| |||| |||||  |||||||||||||||    
T  16327193 ttaagttattttggtaacacataagtcctttaagtttgtaaac 16327235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 378 - 511
Target Start/End: Original strand, 4943069 - 4943204
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaa-gaacttatgtgtgaccaaaataactt-aaaggatcaatattttacaaacctcaa 475  Q
    ||||||||| |||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||||| ||||||||||| | ||| |||  ||||    
T  4943069 tttggttaatagaatgactaaattgaaaatgtttacaaacttaaaagaacttatgtgtgaccaaaataacttaaaaggatcaatctgttataaatttcaa 4943168  T
Q  476 atttaaatgacttatatgtgactaaaataacttaaa 511  Q
    | ||||| ||||||| |||||  ||||||| |||||    
T  4943169 acttaaaggacttatgtgtgatcaaaataatttaaa 4943204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 287 - 543
Target Start/End: Original strand, 35811996 - 35812252
Alignment:
Q  287 tcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaa 386  Q
    |||||||| |||||||||||| |  |||||  ||||||||||||||||       ||||| || | || |||||||||  ||||||||| ||||||||||    
T  35811996 tcatttaaattattttggtcatatataagtactttaagtttgtaaacatttttt-atttattcatcctgccacatcattgtttttgtaaagtttggttaa 35812094  T
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
     |||||||||| | | ||||  |||| ||| |||||  | ||||||||||||||||||||||  |||||||||   ||||||| |||||| |||||||||    
T  35812095 tagaatgactaaaataaaaatatttataaatttaaatgatttatgtgtgaccaaaataacttcgaggatcaatcagttacaaatctcaaacttaaatgac 35812194  T
Q  487 ttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||  ||||| ||||||| |||||  || ||| |||||||||| | ||| |||||||    
T  35812195 ttatgcgtgaccaaaataatttaaaggaccaatctattacaaactttaaatttaaagg 35812252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 25456314 - 25456411
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    |||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||  |||||  |||||||| |||||    
T  25456314 gttattttgatcacacataagtcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataagtcttttaagttggtaaa 25456411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 403 - 511
Target Start/End: Complemental strand, 5746237 - 5746129
Alignment:
Q  403 aaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaa 502  Q
    ||||| ||||||||||||||| |||||||| | |||||||||||||||| || |||| | ||| ||||||||||||||||  |||||| |||||| ||||    
T  5746237 aaaacgtttacaaacttaaaggacttatgttttaccaaaataacttaaatgaccaatctgttataaacctcaaatttaaagaacttatgtgtgaccaaaa 5746138  T
Q  503 taacttaaa 511  Q
    |||||||||    
T  5746137 taacttaaa 5746129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 237 - 333
Target Start/End: Complemental strand, 28559532 - 28559436
Alignment:
Q  237 tattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||| |||||||| ||||||||||||||||||||||||||| ||||||| ||||| ||||||| ||||||| |||||  ||||||||| |||||    
T  28559532 tattttggtcacacacaagtcctttaagtttgaggtttataacagattggtcctttaaattattttagtcacacataagtcctttaagtttataaac 28559436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 393 - 542
Target Start/End: Complemental strand, 23662029 - 23661881
Alignment:
Q  393 gactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatat 492  Q
    ||||| ||| ||||||||||||||||||||  |||||||||||||||||||||||||||  |||||| | | |||||  ||||| ||||| ||||||| |    
T  23662029 gactaaatttaaaacttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa--atcaatctgtcacaaatatcaaacttaaaggacttatgt 23661932  T
Q  493 gtgactaaaataacttaaaa-acaaatttattacaaacgtcaaacttaaag 542  Q
    || || |||||||||||||| |  ||| | |||||||||||||| ||||||    
T  23661931 gtaaccaaaataacttaaaagatcaatctgttacaaacgtcaaatttaaag 23661881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 393 - 542
Target Start/End: Original strand, 23796541 - 23796689
Alignment:
Q  393 gactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatat 492  Q
    ||||| ||| ||||||||||||||||||||  |||||||||||||||||||||||||||  |||||| | | |||||  ||||| ||||| ||||||| |    
T  23796541 gactaaatttaaaacttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa--atcaatctgtcacaaatatcaaacttaaaggacttatgt 23796638  T
Q  493 gtgactaaaataacttaaaa-acaaatttattacaaacgtcaaacttaaag 542  Q
    || || |||||||||||||| |  ||| | |||||||||||||| ||||||    
T  23796639 gtaaccaaaataacttaaaagatcaatctgttacaaacgtcaaatttaaag 23796689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 192 - 323
Target Start/End: Original strand, 32361167 - 32361295
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    ||||||||  |||||||||||||||| ||||||||||||||||   |||||| |||||||  |||  ||||||||||| |||| ||||||||| |||  |    
T  32361167 gtcctttaaatttgaagtttgtaatagattgatcatttaagtt---attttggtcacacataagttatttaagtttgaagtttgtaacaaattagtccct 32361263  T
Q  292 taagttattttggtcacacgtaagttgtttaa 323  Q
    |||||||||||||||| || |||||| |||||    
T  32361264 taagttattttggtcatacataagttatttaa 32361295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 189 - 332
Target Start/End: Original strand, 35461432 - 35461572
Alignment:
Q  189 cgggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtc 288  Q
    ||||||||||| |||||| |||||||||| |||| || ||||||||   |||||| |||||||  |||||| ||||||||| |||| ||||| |||||||    
T  35461432 cgggtcctttaagtttgaggtttgtaatatattggtcctttaagtt---attttggtcacacataagtcctgtaagtttgaagtttgtaacagattggtc 35461528  T
Q  289 atttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
     ||||| |||||||| |||||  |||||  ||||||||||||||    
T  35461529 ctttaaattattttgatcacaaataagtcctttaagtttgtaaa 35461572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 387 - 541
Target Start/End: Original strand, 1996332 - 1996487
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    ||||||||||| || |||||   |||||||||||||   |||||| ||||||||||||| |||||||| |||| | |||||||||||||| ||||| |||    
T  1996332 cagaatgactaaatcgaaaatccttacaaacttaaatggcttatgagtgaccaaaataatttaaaggaacaatctcttacaaacctcaaacttaaaggac 1996431  T
Q  487 ttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaa 541  Q
    |||| || ||| |||||| | ||||  || ||| |||||||||| |||||||||||    
T  1996432 ttatctgagaccaaaatatcataaatgaccaatctattacaaacctcaaacttaaa 1996487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 452
Target Start/End: Original strand, 7210214 - 7210309
Alignment:
Q  357 cacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaag 452  Q
    |||||||| |||||||||| ||||  ||||||||||||||| ||| ||||| ||||||||||||||  |||||||||  |||||||||||||||||    
T  7210214 cacatcattatttttgtaacgtttaattaacagaatgactaaatttaaaacgtttacaaacttaaatgacttatgtgcaaccaaaataacttaaag 7210309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 409 - 512
Target Start/End: Original strand, 14604267 - 14604370
Alignment:
Q  409 tttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataactt 508  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||| |||| | |||||||| | |||||||||  | |||  |||||| ||||||||||    
T  14604267 tttacaatcttaacgaacttatgtgtgaccaaaataacttaaaggaccaatctattacaaactttaaatttaaagaatttaggtgtgaccaaaataactt 14604366  T
Q  509 aaaa 512  Q
    ||||    
T  14604367 aaaa 14604370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 388 - 543
Target Start/End: Original strand, 17400725 - 17400883
Alignment:
Q  388 agaatgactagattgaaaacttttacaaacttaaagaacttatgtg--tgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatga 485  Q
    |||| ||||| ||||||||| |||||||| |||||| |||||||||  ||||||||| |||||| |||| |||| | ||||||| |||||| ||||| ||    
T  17400725 agaaggactaaattgaaaacgtttacaaatttaaaggacttatgtgtgtgaccaaaacaacttacaggaccaatctgttacaaaactcaaacttaaagga 17400824  T
Q  486 cttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||| |||||  |||||||||||||  || ||| | |||||||  |||||||||||||    
T  17400825 cttatgtgtgatcaaaataacttaaatgaccaatatgttacaaatctcaaacttaaagg 17400883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 413 - 488
Target Start/End: Complemental strand, 32361240 - 32361165
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgactt 488  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||| | |||||||| ||||||||||| |||||    
T  32361240 caaacttaaataacttatgtgtgaccaaaataacttaaatgatcaatctattacaaacttcaaatttaaaggactt 32361165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 425 - 542
Target Start/End: Complemental strand, 19550219 - 19550101
Alignment:
Q  425 acttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttatt 523  Q
    |||||||||| |||||||||||||||| |||||| || ||| ||| |||||| ||||| ||||||| ||| || ||||||||||||| ||  ||| ||||    
T  19550219 acttatgtgtaaccaaaataacttaaatgatcaaaatgttaaaaatctcaaacttaaaagacttatgtgtcaccaaaataacttaaagaatcaatctatt 19550120  T
Q  524 acaaacgtcaaacttaaag 542  Q
    |||||| ||||||||||||    
T  19550119 acaaacctcaaacttaaag 19550101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 399 - 543
Target Start/End: Complemental strand, 32361314 - 32361169
Alignment:
Q  399 attgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgact 498  Q
    ||||||||| ||| |||  ||||| ||||||||| ||||||||||||||||| |||  ||| | |||||||| ||||| |||||| |||||| ||||||     
T  32361314 attgaaaacattttcaactttaaataacttatgtatgaccaaaataacttaagggactaatttgttacaaacttcaaacttaaataacttatgtgtgacc 32361215  T
Q  499 aaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    |||||||||||||  |  ||| |||||||||| ||||| |||||||    
T  32361214 aaaataacttaaatgatcaatctattacaaacttcaaatttaaagg 32361169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 236 - 334
Target Start/End: Complemental strand, 4943198 - 4943098
Alignment:
Q  236 ttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggt-catttaagttattttggtcacacgtaagtt-gtttaagtttgtaaac 333  Q
    ||||||||||||||||  ||||||||||||||||  ||||||||| |||| | | ||||||||||||||||||||| ||||||  |||||||||||||||    
T  4943198 ttattttgatcacacataagtcctttaagtttgaaatttataacagattgatccttttaagttattttggtcacacataagttcttttaagtttgtaaac 4943099  T
Q  334 a 334  Q
    |    
T  4943098 a 4943098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 413 - 543
Target Start/End: Original strand, 4943166 - 4943298
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatg-acttatatgtgactaaaataacttaaa 511  Q
    ||||||||||| |||||||||||| |||||||| |||||| | |||||| ||||||| |||||| ||||| | |||||| |||||| |||||||||||||    
T  4943166 caaacttaaaggacttatgtgtgatcaaaataatttaaagtaccaatatgttacaaatctcaaacttaaaagaacttatgtgtgaccaaaataacttaaa 4943265  T
Q  512 -aacaaatttattacaaacgtcaaacttaaagg 543  Q
      || ||| ||| |||||| ||||| |||||||    
T  4943266 tgaccaatctatcacaaacctcaaatttaaagg 4943298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 374 - 482
Target Start/End: Original strand, 36760764 - 36760872
Alignment:
Q  374 aatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctc 473  Q
    ||||||||||||| |||| ||||| ||||||||  |||||||||| |||  |||||||||||||| ||||||||||||  ||| || | |||||||||||    
T  36760764 aatgtttggttaatagaaggactaaattgaaaatgtttacaaactaaaaagacttatgtgtgaccgaaataacttaaattatctatctgttacaaacctc 36760863  T
Q  474 aaatttaaa 482  Q
    ||| |||||    
T  36760864 aaacttaaa 36760872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 378 - 490
Target Start/End: Complemental strand, 37642961 - 37642849
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaat 477  Q
    ||||||||| |||||||||| || |||||| ||||||||||||||| | |||| || ||||||||||||||||| || ||| || |||||||| | |||     
T  37642961 tttggttaatagaatgactaaatcgaaaacgtttacaaacttaaaggatttatttgagaccaaaataacttaaatgagcaacatgttacaaacttaaaac 37642862  T
Q  478 ttaaatgacttat 490  Q
    ||||| |||||||    
T  37642861 ttaaacgacttat 37642849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 23662215 - 23662144
Alignment:
Q  257 cctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||||||||||||||| ||| ||||||||| |||||||||||||||| |||| |||||| ||||||||||    
T  23662215 cctttaagtttgaggtttgtaataaattggtcctttaagttattttggttacacataagttctttaagtttg 23662144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 235 - 334
Target Start/End: Complemental strand, 28022246 - 28022147
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
    ||||| ||| |||||||  ||| ||||||||||||||||||||| |||||| |||||||||||||||||||||| | ||||   ||||| ||||||||||    
T  28022246 gttatcttggtcacacataagttctttaagtttgaggtttataataaattgatcatttaagttattttggtcacgcataagccctttaaatttgtaaaca 28022147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 254 - 328
Target Start/End: Complemental strand, 17400886 - 17400812
Alignment:
Q  254 agtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||||||||| ||| ||||| |||||||||||||||||||||| |||||| |||||  ||||||||||    
T  17400886 agtcctttaagtttgagatttgtaacatattggtcatttaagttattttgatcacacataagtcctttaagtttg 17400812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 387 - 481
Target Start/End: Original strand, 38682784 - 38682878
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaa 481  Q
    ||||| ||||| || |||||  ||||||||||||||  |||||||||| ||||||||||||| |||||||||| | |||||||||||||| ||||    
T  38682784 cagaaagactaaatcgaaaatgtttacaaacttaaaagacttatgtgtaaccaaaataactttaaggatcaatctattacaaacctcaaacttaa 38682878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 256 - 333
Target Start/End: Original strand, 7209848 - 7209925
Alignment:
Q  256 tcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||| ||||||||||| ||| ||||  ||||||||||||||||||||||||| |||||  |||||||||||||||    
T  7209848 tcctttatgtttgaggtttgtaataaatacgtcatttaagttattttggtcacacataagtcctttaagtttgtaaac 7209925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 413 - 490
Target Start/End: Original strand, 17400812 - 17400889
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttat 490  Q
    ||||||||||| |||||||||||| |||||||||||||| || |||||| ||||||| |||||| ||||| |||||||    
T  17400812 caaacttaaaggacttatgtgtgatcaaaataacttaaatgaccaatatgttacaaatctcaaacttaaaggacttat 17400889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 413 - 482
Target Start/End: Complemental strand, 40980783 - 40980714
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||||| | |||||||||||||| |||||    
T  40980783 caaacttaaagtacttatgtgtgatcaaaataacttaaatgatcaatctattacaaacctcaaacttaaa 40980714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 418 - 514
Target Start/End: Original strand, 1649341 - 1649436
Alignment:
Q  418 ttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaaac 514  Q
    |||||| ||||||| |||| ||||||||||||| |||||||| | |||||||||||||| ||||| ||||||| | |||| |||||| |||||||||    
T  1649341 ttaaaggacttatgagtgatcaaaataacttaatggatcaatctgttacaaacctcaaacttaaa-gacttatgtctgaccaaaatagcttaaaaac 1649436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 386 - 482
Target Start/End: Complemental strand, 20181500 - 20181404
Alignment:
Q  386 acagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||| ||| | ||||||||| ||||||||||||||  |||||| | ||||||||||||| |||| ||||||| | |||||| |||||||||||||    
T  20181500 acagaaggacaaaattgaaaacatttacaaacttaaatgacttatatttgaccaaaataacataaatgatcaatctattacaaccctcaaatttaaa 20181404  T

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Target: chr5; HSP #52
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 409 - 508
Target Start/End: Original strand, 28022149 - 28022248
Alignment:
Q  409 tttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataactt 508  Q
    |||||||| ||||||  |||||| ||||||||||||||||||| ||||||| | ||| |||||||||| |||||  |||||| |||||| || |||||||    
T  28022149 tttacaaatttaaagggcttatgcgtgaccaaaataacttaaatgatcaatttattataaacctcaaacttaaagaacttatgtgtgaccaagataactt 28022248  T

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Target: chr5; HSP #53
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 387 - 490
Target Start/End: Complemental strand, 33491670 - 33491567
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    ||||| ||||| |||||||| ||||||||| |||||| |||||| ||||| |||||||||||||||||  |||   |||||||||| ||| ||||| |||    
T  33491670 cagaaggactaaattgaaaatttttacaaagttaaaggacttatctgtgatcaaaataacttaaaggactaattgattacaaaccttaaacttaaaggac 33491571  T
Q  487 ttat 490  Q
    ||||    
T  33491570 ttat 33491567  T

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Target: chr5; HSP #54
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 192 - 293
Target Start/End: Original strand, 40980710 - 40980808
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||||| |||||| |||||||||| |||||||||||||   |||||||||||||||||  ||| ||||||||||||  ||| ||| ||||||||| ||    
T  40980710 gtcctttaagtttgaggtttgtaatagattgatcatttaa---gttattttgatcacacataagtactttaagtttgaaatttgtaataaattggtcttt 40980806  T

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Target: chr5; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 14604104 - 14604202
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca-tttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    ||||||||| |||||||  ||||||||||||||||||||| ||||| |||| ||| |||| |||||||||||||||  |||||  ||||| ||||||||    
T  14604104 gttattttggtcacacataagtcctttaagtttgaggtttgtaacagattgatcattttatgttattttggtcacatataagtcctttaaatttgtaaa 14604202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 20928114 - 20928052
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagtt 297  Q
    ||||||||| |||||||  ||||||||||||||||| ||| ||||||||||||||||||||||    
T  20928114 gttattttggtcacacataagtcctttaagtttgagttttctaacaaattggtcatttaagtt 20928052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 254 - 328
Target Start/End: Original strand, 32361166 - 32361240
Alignment:
Q  254 agtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||||||| ||||| |||| ||| | |||| |||||||||||||||||||||||| |||||| ||||||||||    
T  32361166 agtcctttaaatttgaagtttgtaatagattgatcatttaagttattttggtcacacataagttatttaagtttg 32361240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 250 - 316
Target Start/End: Original strand, 35461430 - 35461496
Alignment:
Q  250 cacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagt 316  Q
    |||| |||||||||||||||||||| ||| | ||||||| ||||||||||||||||||||| |||||    
T  35461430 cacgggtcctttaagtttgaggtttgtaatatattggtcctttaagttattttggtcacacataagt 35461496  T

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Target: chr5; HSP #59
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 409 - 511
Target Start/End: Original strand, 37642995 - 37643097
Alignment:
Q  409 tttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataactt 508  Q
    ||||||||||||||| |||||| |||||||||||||| ||||||| |||||   |||||||| ||||  ||||| |||||||  ||||  ||||||||||    
T  37642995 tttacaaacttaaaggacttatttgtgaccaaaataatttaaagggtcaatccgttacaaacatcaatgttaaaggacttatgagtgatcaaaataactt 37643094  T
Q  509 aaa 511  Q
    |||    
T  37643095 aaa 37643097  T

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Target: chr5; HSP #60
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 333
Target Start/End: Complemental strand, 10827445 - 10827305
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtccttt-aagtttgaggtttataacaaattggtca 289  Q
    |||| |||| |||||| ||||||||||||||| || |||||||||||   ||| |||| ||  |||||||| ||||||||| ||| ||||| |||| ||     
T  10827445 ggtcatttaagtttgaggtttgtaataaattggtcctttaagttgtt---ttggtcactcataagtccttttaagtttgagttttgtaacagattgatcc 10827349  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||| ||||||||||||||   ||||  |||||||||||||||    
T  10827348 tttaaattattttggtcacaaacaagtcctttaagtttgtaaac 10827305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 413 - 482
Target Start/End: Complemental strand, 19550171 - 19550102
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||  |||||||||| ||||||||||||||||| |||||| | |||||||||||||| |||||    
T  19550171 caaacttaaaagacttatgtgtcaccaaaataacttaaagaatcaatctattacaaacctcaaacttaaa 19550102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 259 - 328
Target Start/End: Complemental strand, 20928150 - 20928081
Alignment:
Q  259 tttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||| |||||||||||||||| ||| ||| ||||||||||||||||||||| |||||  ||||||||||    
T  20928150 tttaactttgaggtttataacagatttgtcctttaagttattttggtcacacataagtcctttaagtttg 20928081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 413 - 482
Target Start/End: Original strand, 20928081 - 20928150
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||| ||||||||||||||||||||||||||||||  ||| | ||| |||||||||| |||||    
T  20928081 caaacttaaaggacttatgtgtgaccaaaataacttaaaggacaaatctgttataaacctcaaagttaaa 20928150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 40980710 - 40980783
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||||||||||||||||| ||| | |||| ||||||||||||||||| |||||| |||||  ||||||||||    
T  40980710 gtcctttaagtttgaggtttgtaatagattgatcatttaagttattttgatcacacataagtactttaagtttg 40980783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 88 - 159
Target Start/End: Original strand, 4841789 - 4841861
Alignment:
Q  88 atatttatcatatacctttaaactattataggtgtatatacctgttaa-aaataggtaataatctggtgtggc 159  Q
    |||||||||||||| ||||||||||| ||||||||||||| || |||| ||||  ||||||||||||||||||    
T  4841789 atatttatcatatatctttaaactataataggtgtatatatctattaagaaatgagtaataatctggtgtggc 4841861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 409 - 509
Target Start/End: Complemental strand, 10827241 - 10827143
Alignment:
Q  409 tttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataactt 508  Q
    ||||||||||||||| ||| |  ||||||||||||||||||||| | |||| | ||||||| |||||| ||||| ||||||| |||||| ||||||||||    
T  10827241 tttacaaacttaaaggactaaa-tgtgaccaaaataacttaaag-accaatctgttacaaaactcaaacttaaaagacttatgtgtgaccaaaataactt 10827144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 413 - 482
Target Start/End: Complemental strand, 14604137 - 14604072
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||| ||||||||||||||||||||||||    ||||||| | ||||||||||||||||||||    
T  14604137 caaacttaaaggacttatgtgtgaccaaaataactt----gatcaatctattacaaacctcaaatttaaa 14604072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 357 - 489
Target Start/End: Original strand, 19550228 - 19550359
Alignment:
Q  357 cacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatc 456  Q
    ||||||||  ||| |||| |||||||||||||||| ||||| ||||||||  ||||| ||||||||  | ||| ||| |||||| |||||||||| ||||    
T  19550228 cacatcatagtttatgtactgtttggttaacagaaggactaaattgaaaa-gtttactaacttaaatgagttacgtgggaccaagataacttaaaagatc 19550326  T
Q  457 aatattttacaaacctcaaatttaaatgactta 489  Q
    ||| | |||||||| ||||| || || ||||||    
T  19550327 aatctgttacaaacatcaaacttgaaggactta 19550359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 394 - 541
Target Start/End: Original strand, 35813485 - 35813632
Alignment:
Q  394 actagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatg 493  Q
    |||| ||||||||| ||||||| ||||||  |||||||| ||| ||||||||||||||  |  ||| | |||||||||||| | ||||| ||||||| ||    
T  35813485 actaaattgaaaacatttacaatcttaaatgacttatgtatgagcaaaataacttaaa-aacaaatctgttacaaacctcacacttaaaggacttatgtg 35813583  T
Q  494 tgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaa 541  Q
    | || ||||||||||||| ||| ||| | |||||||| | |||||||||    
T  35813584 taaccaaaataacttaaataactaatctgttacaaaccttaaacttaaa 35813632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 192 - 333
Target Start/End: Original strand, 1996141 - 1996279
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||||| ||||||  ||||||| | ||||||  ||||||||   |||||| ||||| |  | ||||||||||||| ||||| ||| | ||| ||| ||    
T  1996141 gtcctttaagtttgagatttgtaacagattgatattttaagtt---attttggtcacatataaatcctttaagtttggggtttgtaatagattagtcctt 1996237  T
Q  292 taagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||||||||||||| |||||  | |||||||||||||    
T  1996238 taagttattttggtcacacataagtcctataagtttgtaaac 1996279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 316
Target Start/End: Original strand, 19550101 - 19550219
Alignment:
Q  195 ctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaa 294  Q
    ||||| |||||| |||||||||| ||||||  ||||||||   |||||| | |||||  |||| |||||||||||| ||| |||||  ||| ||||||||    
T  19550101 ctttaagtttgaggtttgtaatagattgattctttaagtt---attttggtgacacataagtcttttaagtttgagatttttaacattttgatcatttaa 19550197  T
Q  295 gttattttggtcacacgtaagt 316  Q
    ||||||||||| |||| |||||    
T  19550198 gttattttggttacacataagt 19550219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 23662215 - 23662109
Alignment:
Q  194 cctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattgg-tcattt 292  Q
    |||||| |||||| ||||||||||||||| || ||||||||   |||||| | |||||  ||| ||||||||||||| ||| ||||||||||| || |||    
T  23662215 cctttaagtttgaggtttgtaataaattggtcctttaagtt---attttggttacacataagttctttaagtttgagatttgtaacaaattggttctttt 23662119  T
Q  293 aagttatttt 302  Q
    ||||||||||    
T  23662118 aagttatttt 23662109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 257 - 316
Target Start/End: Original strand, 23796373 - 23796432
Alignment:
Q  257 cctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagt 316  Q
    |||||||||||||||||| ||| ||||||||| |||||||||||||||| |||| |||||    
T  23796373 cctttaagtttgaggtttgtaataaattggtcctttaagttattttggttacacataagt 23796432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 409 - 482
Target Start/End: Original strand, 6588074 - 6588144
Alignment:
Q  409 tttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||||||||||| |  ||||||| |||||||||||||||||  |||||||| ||||||||||||||||||||    
T  6588074 tttacaaacttaaatag-ttatgtgcgaccaaaataacttaaa--atcaatatgttacaaacctcaaatttaaa 6588144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 264 - 391
Target Start/End: Complemental strand, 10074194 - 10074068
Alignment:
Q  264 gtttgaggtttataacaaattggtcatttaagttattttgg-tcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatc 362  Q
    ||||||||||| ||||| |||  |||||||||| |||||   |||||| |||||| ||||||||||||||||       ||||| ||||||||| | |||    
T  10074194 gtttgaggtttgtaacagattaatcatttaagtaattttttatcacacataagtt-tttaagtttgtaaacattttcg-atttaatccttctactatatc 10074097  T
Q  363 atcatttttgtaatgtttggttaacagaa 391  Q
    |||||||||||||||||||||||| ||||    
T  10074096 atcatttttgtaatgtttggttaatagaa 10074068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 420 - 486
Target Start/End: Original strand, 10827378 - 10827444
Alignment:
Q  420 aaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    |||| ||||||| |||||||||| ||||||||||| |||| | |||||||||||||| |||||||||    
T  10827378 aaaggacttatgagtgaccaaaacaacttaaaggaccaatttattacaaacctcaaacttaaatgac 10827444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 236 - 450
Target Start/End: Original strand, 33491552 - 33491754
Alignment:
Q  236 ttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacan 335  Q
    ||||||||||  ||||  |||||||||||||| |||||| |||  |||| ||| |||||||||||||| |||||  |||||  ||||| |||||||| |     
T  33491552 ttattttgattgcacataagtcctttaagtttaaggtttgtaatcaattagtcctttaagttattttgatcacagataagtcctttaactttgtaaa-aa 33491650  T
Q  336 nnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtg 435  Q
          ||||||||||||| || ||||||| ||||          |||||||||||  |||| ||||||||| | ||| ||||||||| ||| |||||||    
T  33491651 ttttcaatttagtccttctgccgcatcatcttttt----------ggttaacagaagaactaaattgaaaacgtctacgaacttaaag-actcatgtgtg 33491739  T
Q  436 accaaaataacttaa 450  Q
    |||||||||||||||    
T  33491740 accaaaataacttaa 33491754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 256 - 334
Target Start/End: Complemental strand, 36760875 - 36760797
Alignment:
Q  256 tcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
    ||||||||||||||||||| ||||| || | | ||||||||||||| |||||||| |||||  ||| ||||||||||||    
T  36760875 tcctttaagtttgaggtttgtaacagatagataatttaagttatttcggtcacacataagtctttttagtttgtaaaca 36760797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 235 - 316
Target Start/End: Complemental strand, 1649487 - 1649407
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagt 316  Q
    |||||||||||||||||| |||| || ||| ||||||||||||||| ||||||  |||||| ||||||||||| || |||||    
T  1649487 gttattttgatcacacacaagtcattaaagcttgaggtttataacatattggt-ttttaagctattttggtcagacataagt 1649407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 4943299 - 4943238
Alignment:
Q  256 tcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagtt 317  Q
    |||||||| |||||||||| | | | ||||||||||||||||||||||||||||| ||||||    
T  4943299 tcctttaaatttgaggtttgtgatagattggtcatttaagttattttggtcacacataagtt 4943238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 235 - 308
Target Start/End: Complemental strand, 12713185 - 12713112
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcac 308  Q
    ||||||||  |||||||  ||||||||||||||||| ||| ||||| |||| || |||||||||||||||||||    
T  12713185 gttatttttgtcacacataagtcctttaagtttgagatttctaacatattgatcttttaagttattttggtcac 12713112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 235 - 308
Target Start/End: Complemental strand, 12774449 - 12774376
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcac 308  Q
    ||||||||  |||||||  ||||||||||||||||| ||| ||||| |||| || |||||||||||||||||||    
T  12774449 gttatttttgtcacacataagtcctttaagtttgagatttctaacatattgatcttttaagttattttggtcac 12774376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 425 - 482
Target Start/End: Complemental strand, 23796432 - 23796375
Alignment:
Q  425 acttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||||||| ||||||||||||||||||| |||| | |||||||||||||| |||||    
T  23796432 acttatgtgtaaccaaaataacttaaaggaccaatttattacaaacctcaaacttaaa 23796375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 202 - 332
Target Start/End: Complemental strand, 23796682 - 23796557
Alignment:
Q  202 tttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattt 301  Q
    ||||| |||||||| | ||||||| ||||||||   |||||| | |||||  ||||||||||||||||  ||| | ||| |||| |  ||||||||||||    
T  23796682 tttgacgtttgtaacagattgatcttttaagtt---attttggttacacataagtcctttaagtttgatatttgtgacagattgat--tttaagttattt 23796588  T
Q  302 tggtcacacgtaagttgtttaagtttgtaaa 332  Q
    ||||||||| |||||  ||||||||||||||    
T  23796587 tggtcacacataagtcttttaagtttgtaaa 23796557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 260 - 406
Target Start/End: Complemental strand, 38682878 - 38682733
Alignment:
Q  260 ttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccac 359  Q
    ||||||||||||||| ||| | |||| || || ||||||||||||| |||| |||||  ||||||||||||||||       |||||||| |||| |||     
T  38682878 ttaagtttgaggtttgtaatagattgatccttaaagttattttggttacacataagtcttttaagtttgtaaaca-ttttcgatttagtctttctgccat 38682780  T
Q  360 atcatcatttttgtaatgtttggttaacagaatgactagattgaaaa 406  Q
    || ||| ||||||||| ||||| |||| ||||  |||| ||||||||    
T  38682779 attatcgtttttgtaaagtttgattaatagaagaactaaattgaaaa 38682733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 413 - 464
Target Start/End: Complemental strand, 5746167 - 5746116
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatatttt 464  Q
    |||| |||||||||||||||||||||||||||||||||| || |||| ||||    
T  5746167 caaatttaaagaacttatgtgtgaccaaaataacttaaatgaccaatttttt 5746116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 25456550 - 25456499
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcatttaagttattttggtcaca 309  Q
    ||||||||||||||||| ||| | ||||||| ||||||||||||||||||||    
T  25456550 ctttaagtttgaggtttgtaatagattggtcctttaagttattttggtcaca 25456499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 356 - 451
Target Start/End: Complemental strand, 35188089 - 35187994
Alignment:
Q  356 ccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaa 451  Q
    |||||||||| ||||| ||| ||||| |||||| ||  | || ||| ||||  ||||||||||||||  | |||||||||||||||||||||||||    
T  35188089 ccacatcatcgtttttataacgtttgattaacataaacagtaaattaaaaatgtttacaaacttaaatgatttatgtgtgaccaaaataacttaaa 35187994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 427 - 482
Target Start/End: Complemental strand, 38680688 - 38680633
Alignment:
Q  427 ttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||||||||||||||||||| ||||| | |||||||| ||||| |||||    
T  38680688 ttatgtgtgaccaaaataacttaaagggtcaatctattacaaacttcaaacttaaa 38680633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 342 - 469
Target Start/End: Original strand, 40980855 - 40980981
Alignment:
Q  342 atttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaa 441  Q
    |||||||| || | |||||||||| |||||||||||| ||  ||||| || ||||| ||||||||  | ||| || || |||||||||||||| |  |||    
T  40980855 atttagtcattttgccacatcatcgtttttgtaatgtgtgactaacataaagactaaattgaaaatgtgtac-aagtttaagaacttatgtgttataaaa 40980953  T
Q  442 ataacttaaaggatcaatattttacaaa 469  Q
    |||||||||| ||||||| | |||||||    
T  40980954 ataacttaaaagatcaatttattacaaa 40980981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 543
Target Start/End: Original strand, 1649396 - 1649523
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaa 512  Q
    |||||||||||| ||||||| ||||||||||| ||||||  | |||||| ||| |||||||||  || |||||||| | |||||  ||||||||||||||    
T  1649396 caaacttaaaga-cttatgtctgaccaaaatagcttaaaa-accaatatgttataaacctcaagctttaatgacttgtgtgtgatcaaaataacttaaaa 1649493  T
Q  513 acaaatttattacaaacgtcaaacttaaagg 543  Q
     | ||| | |||||||| | |||||||||||    
T  1649494 tc-aatatgttacaaaccttaaacttaaagg 1649523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 328
Target Start/End: Complemental strand, 4943299 - 4943166
Alignment:
Q  193 tcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtccttt-aagtttgaggtttataacaaattggtcatt 291  Q
    |||||||  ||||| |||||| ||| |||| |||||||||||   |||||| |||||||  ||| |||| ||||||||| ||| ||||| ||||||  ||    
T  4943299 tcctttaaatttgaggtttgtgatagattggtcatttaagtt---attttggtcacacataagttcttttaagtttgagatttgtaacatattggtactt 4943203  T
Q  292 taagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||| |||||||| |||||| |||||  ||||||||||    
T  4943202 taaattattttgatcacacataagtcctttaagtttg 4943166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 259 - 333
Target Start/End: Complemental strand, 5746381 - 5746307
Alignment:
Q  259 tttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    |||||| ||||||||| |||||||||  || ||||| |||||||||||| || |||||  |||||||||||||||    
T  5746381 tttaagcttgaggtttgtaacaaattaatcttttaaattattttggtcatacataagtcatttaagtttgtaaac 5746307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 10074257 - 10074211
Alignment:
Q  261 taagtttgaggtttataacaaattggtcatttaagttattttggtca 307  Q
    |||||||||||||| ||||| |||| |||||||||||||||||||||    
T  10074257 taagtttgaggtttgtaacagattgttcatttaagttattttggtca 10074211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 25456609 - 25456540
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||||||||| ||||| ||||||| ||||||||||||| ||||||| ||| |  ||||||||||    
T  25456609 ctttaagtttgaggtttgtaacagattggtc-tttaagttattttagtcacacataaatactttaagtttg 25456540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 487
Target Start/End: Original strand, 35812181 - 35812255
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    ||||||||||  ||||||| ||||||||||||| |||||||| |||| | |||||||| | ||||||||| ||||    
T  35812181 caaacttaaatgacttatgcgtgaccaaaataatttaaaggaccaatctattacaaactttaaatttaaaggact 35812255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 413 - 482
Target Start/End: Complemental strand, 1996214 - 1996145
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||| | |||| ||||||||||||||||||||  |||||| | ||||||| |||||| |||||    
T  1996214 caaacttaaaggatttatatgtgaccaaaataacttaaaatatcaatctgttacaaatctcaaacttaaa 1996145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #98
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 7209848 - 7209920
Alignment:
Q  193 tcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttg 268  Q
    |||||||||||||| |||||||||||||   ||||||||   ||||||||| |||||||  |||||||||||||||    
T  7209848 tcctttatgtttgaggtttgtaataaatacgtcatttaa---gttattttggtcacacataagtcctttaagtttg 7209920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #99
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 413 - 482
Target Start/End: Complemental strand, 20927917 - 20927848
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||| |||||| |||||||||| || ||||||||||||| ||||||| | ||||||| |||||| |||||    
T  20927917 caaatttaaaggacttatgtgtaactaaaataacttaaatgatcaatctattacaaatctcaaacttaaa 20927848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #100
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 25456275 - 25456347
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||||| |||||| ||||| |||||||  ||||||||||||| |||||| |||||  ||||||||||    
T  25456275 gtcctttaagttttaggtttgtaacatattggtc-cttaagttattttgatcacacataagtcctttaagtttg 25456347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #101
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 409 - 482
Target Start/End: Complemental strand, 35812041 - 35811968
Alignment:
Q  409 tttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||||||||||||| |||||| | |||||||||||| ||||| ||||||  | |||||| | |||||||||||    
T  35812041 tttacaaacttaaagtacttatatatgaccaaaataatttaaatgatcaacctattacaatcatcaaatttaaa 35811968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #102
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 478 - 543
Target Start/End: Original strand, 35813509 - 35813574
Alignment:
Q  478 ttaaatgacttatatgtgactaaaataacttaaaaacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||||||||||| | |||  |||||||||||||||||||| | |||||||| ||| |||||||||    
T  35813509 ttaaatgacttatgtatgagcaaaataacttaaaaacaaatctgttacaaacctcacacttaaagg 35813574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #103
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 259 - 307
Target Start/End: Original strand, 13170001 - 13170048
Alignment:
Q  259 tttaagtttgaggtttataacaaattggtcatttaagttattttggtca 307  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  13170001 tttaagtttgaggtttgtaataaattggtc-tttaagttattttggtca 13170048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #104
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 302
Target Start/End: Original strand, 28559229 - 28559281
Alignment:
Q  250 cacgagtcctttaagtttgaggtttataacaaattggtcatttaagttatttt 302  Q
    |||| ||||||||||||||| |||| ||||| ||||||| |||||||||||||    
T  28559229 cacgggtcctttaagtttgacgtttgtaacagattggtcctttaagttatttt 28559281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #105
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 191 - 305
Target Start/End: Original strand, 38680628 - 38680734
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcat 290  Q
    ||||||||| ||||||||||||||||| ||||| | |||||   ||||||||| |||||||  | || ||||| |||| ||||| |||||     |||||    
T  38680628 ggtcctttaagtttgaagtttgtaatagattgaccctttaa---gttattttggtcacacataaatcttttaattttgcggtttgtaaca-----gtcat 38680719  T
Q  291 ttaagttattttggt 305  Q
    |||||||||||||||    
T  38680720 ttaagttattttggt 38680734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #106
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 494 - 541
Target Start/End: Complemental strand, 13170048 - 13170001
Alignment:
Q  494 tgactaaaataacttaaaaacaaatttattacaaacgtcaaacttaaa 541  Q
    |||| ||||||||||||| || |||||||||||||| |||||||||||    
T  13170048 tgaccaaaataacttaaagaccaatttattacaaacctcaaacttaaa 13170001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #107
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 14604317 - 14604266
Alignment:
Q  282 attggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||| ||||||||||||||||||||| ||||||  ||||| ||||||||    
T  14604317 attggtcctttaagttattttggtcacacataagttcgttaagattgtaaac 14604266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #108
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 333
Target Start/End: Complemental strand, 37643116 - 37642994
Alignment:
Q  208 gtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtca 307  Q
    |||| ||||| |||| |||||||||||   ||||||||||| ||  ||||||||||  |||| |||| ||||  ||||  | ||||| ||||||||||||    
T  37643116 gtttataatatattggtcatttaagtt---attttgatcactcataagtcctttaacattgatgtttgtaacggattgaccctttaaattattttggtca 37643020  T
Q  308 cacgtaagttgtttaagtttgtaaac 333  Q
    ||  |||||  |||||||||||||||    
T  37643019 caaataagtcctttaagtttgtaaac 37642994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #109
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 37643134 - 37643079
Alignment:
Q  253 gagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcac 308  Q
    |||| ||||||||||  ||||||||| | |||||||||||||||||||||| ||||    
T  37643134 gagttctttaagttttgggtttataatatattggtcatttaagttattttgatcac 37643079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #110
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 12713222 - 12713152
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||| |||||| ||||||| |  || ||||||||||||||||| ||||||| |||||  ||||||||||    
T  12713222 ctttaaatttgagctttataataggttagtcatttaagttatttttgtcacacataagtcctttaagtttg 12713152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #111
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 12774486 - 12774416
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||| |||||| ||||||| |  || ||||||||||||||||| ||||||| |||||  ||||||||||    
T  12774486 ctttaaatttgagctttataataggttagtcatttaagttatttttgtcacacataagtcctttaagtttg 12774416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #112
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 17400584 - 17400681
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||| |||||||  |||| |||||||||||  ||| ||||||||||||| |||||||| ||||| || ||| |||||  |||||| ||| ||||    
T  17400584 gttattttg-tcacacataagtcttttaagtttgaaatttgtaacaaattggtcctttaagttcttttgatctcacataagtcctttaaggttgcaaac 17400681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #113
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 19550101 - 19550171
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||||||||| ||| | |||| |  |||||||||||||||| |||| |||||  ||||||||||    
T  19550101 ctttaagtttgaggtttgtaatagattgattctttaagttattttggtgacacataagtcttttaagtttg 19550171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #114
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 255 - 301
Target Start/End: Complemental strand, 19550405 - 19550359
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattt 301  Q
    |||||||||||||||||||| ||||| |||| || ||||||||||||    
T  19550405 gtcctttaagtttgaggtttgtaacagattgttcctttaagttattt 19550359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #115
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 23661881 - 23661951
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||| ||||| |||| ||||| |||| || |||||||||||||||| |||| |||||  ||||||||||    
T  23661881 ctttaaatttgacgtttgtaacagattgatcttttaagttattttggttacacataagtcctttaagtttg 23661951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #116
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 23796689 - 23796619
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||| ||||| |||| ||||| |||| || |||||||||||||||| |||| |||||  ||||||||||    
T  23796689 ctttaaatttgacgtttgtaacagattgatcttttaagttattttggttacacataagtcctttaagtttg 23796619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #117
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 35813632 - 35813566
Alignment:
Q  259 tttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagt 325  Q
    ||||||||| |||||| ||||| ||| || ||||||||||||||||| |||| |||||  |||||||    
T  35813632 tttaagtttaaggtttgtaacagattagttatttaagttattttggttacacataagtcctttaagt 35813566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #118
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 451
Target Start/End: Original strand, 37032963 - 37033001
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaa 451  Q
    ||||||| ||| |||||||||||||||||||||||||||    
T  37032963 caaacttgaaggacttatgtgtgaccaaaataacttaaa 37033001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #119
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 37642833 - 37642931
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||||  |||||  |||| ||||||||| | |||| |||||  ||| |||||||||||||||||||| ||  ||| |  |||||||||||||||    
T  37642833 gttattttgacaacacataagtcgtttaagttttaagtttgtaacatgttgctcatttaagttattttggtctcaaataaatcctttaagtttgtaaac 37642931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #120
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 434 - 510
Target Start/End: Complemental strand, 13170048 - 13169972
Alignment:
Q  434 tgaccaaaataacttaaaggatcaatattttacaaacctcaaa-tttaaatgacttatatgtgactaaaataacttaa 510  Q
    |||||||||||||||||| || |||| | |||||||||||||| || ||| ||||||| | ||| |||||||||||||    
T  13170048 tgaccaaaataacttaaa-gaccaatttattacaaacctcaaacttaaaaagacttatgtatgattaaaataacttaa 13169972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #121
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 28559574 - 28559501
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||||||| |||| ||||||||| ||| ||||   ||||||||||||||  ||||  ||||||||||    
T  28559574 gtcctttaagtttgatgtttgtaacaaattagtcctttatagtattttggtcacacacaagtcctttaagtttg 28559501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #122
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 416 - 485
Target Start/End: Original strand, 35813566 - 35813635
Alignment:
Q  416 acttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatga 485  Q
    |||||||| |||||||||| ||||||||||||||||  |  ||| | |||||||||| ||| ||||||||    
T  35813566 acttaaaggacttatgtgtaaccaaaataacttaaataactaatctgttacaaaccttaaacttaaatga 35813635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 101; Significance: 1e-49; HSPs: 5)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 190 - 543
Target Start/End: Original strand, 161401 - 161741
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| |||||| |||||||| | |||| || ||||| ||   |||||| |||||||  ||||||||||||||||| ||| ||||| |||||||     
T  161401 gggtcctttaagtttgaggtttgtaacagattggtcctttaactt---attttggtcacacataagtcctttaagtttgagatttgtaacagattggtcc 161497  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacag 389  Q
    ||||| ||||||| ||||||| |||||  |||||||||||| | |       || |||||||| | | |||||||| ||||          || ||||||    
T  161498 tttaacttatttttgtcacacataagtcctttaagtttgtaca-aaatttcaatgtagtccttttgcgacatcatcctttt----------ggctaacag 161586  T
Q  390 aatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgactta 489  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| | |||||||  ||||||||||| ||||||    
T  161587 aatgactaaattgaaaacttttacaaacttaaaggacttatgtgtgaccaaaataacctaaaggaccaatctgttacaaatatcaaatttaaaggactta 161686  T
Q  490 tatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    | |||||| |||||||||||||  |  ||| |||||||||| |||||||||||||    
T  161687 tgtgtgaccaaaataacttaaaggatcaatctattacaaacatcaaacttaaagg 161741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 393 - 543
Target Start/End: Complemental strand, 161556 - 161405
Alignment:
Q  393 gactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatat 492  Q
    ||||| |||||||  || ||||||||||||| ||||||||||||| ||||||| |||||||| |||| | ||||||| |||||| ||||| ||||||| |    
T  161556 gactacattgaaattttgtacaaacttaaaggacttatgtgtgacaaaaataagttaaaggaccaatctgttacaaatctcaaacttaaaggacttatgt 161457  T
Q  493 gtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||| ||||||| |||||  || ||| | |||||||| |||||||||||||    
T  161456 gtgaccaaaataagttaaaggaccaatctgttacaaacctcaaacttaaagg 161405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 192 - 332
Target Start/End: Complemental strand, 161743 - 161606
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||||| |||||| |||||||||| ||||||| ||||||||   |||||| |||||||  |||||||||| |||||  ||| ||||| ||||||| ||    
T  161743 gtcctttaagtttgatgtttgtaatagattgatcctttaagtt---attttggtcacacataagtcctttaaatttgatatttgtaacagattggtcctt 161647  T
Q  292 taagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    || |||||||||||||||| |||||  ||||||||||||||    
T  161646 taggttattttggtcacacataagtcctttaagtttgtaaa 161606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 413 - 487
Target Start/End: Original strand, 161670 - 161744
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||| | |||||||| ||||| ||||| ||||    
T  161670 caaatttaaaggacttatgtgtgaccaaaataacttaaaggatcaatctattacaaacatcaaacttaaaggact 161744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 253 - 316
Target Start/End: Complemental strand, 161745 - 161682
Alignment:
Q  253 gagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagt 316  Q
    ||||||||||||||||| |||| ||| | |||| || ||||||||||||||||||||| |||||    
T  161745 gagtcctttaagtttgatgtttgtaatagattgatcctttaagttattttggtcacacataagt 161682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 7e-48; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 235 - 452
Target Start/End: Original strand, 52913178 - 52913395
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataa-caaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||| |||||||  ||||||||||||||||||||| ||| || ||||||| ||||||||||| | ||||||| |||||  |||||||||||||||    
T  52913178 gttattttggtcacacataagtcctttaagtttgaggtttgtaaacagattggtcctttaagttattctagtcacacataagtcctttaagtttgtaaac 52913277  T
Q  334 annnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtg 433  Q
            |||||||| |||| |||||||||| ||||||||||||||||||||||||| ||||| || |||||| ||||||||||||||| |||||||||    
T  52913278 -gttttcgatttagtcattctgccacatcatcgtttttgtaatgtttggttaacagaaggactaaatagaaaacgtttacaaacttaaaggacttatgtg 52913376  T
Q  434 tgaccaaaataacttaaag 452  Q
    ||| |||||||||| ||||    
T  52913377 tgatcaaaataactcaaag 52913395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 259 - 511
Target Start/End: Original strand, 1173075 - 1173316
Alignment:
Q  259 tttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctacca 358  Q
    |||||||||||||||||||||| ||| ||  ||||||||||||||||||||| |||||  ||||||||||||||||       |||||||| |||| |||    
T  1173075 tttaagtttgaggtttataacagattagtt-tttaagttattttggtcacacataagtc-tttaagtttgtaaacattttcg-atttagtcattctgcca 1173171  T
Q  359 catcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaa 458  Q
    ||||||| ||||||||||||||| ||||||||| ||||| ||||||||| || ||||||| |||| ||||||||||||| |||||||        |||||    
T  1173172 catcatcgtttttgtaatgtttgtttaacagaaagactaaattgaaaacgttcacaaactcaaaggacttatgtgtgacaaaaataa--------atcaa 1173263  T
Q  459 tattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa 511  Q
    | | ||||||| ||||||||||||  |||||||||| ||||||||||||||||    
T  1173264 tctattacaaaactcaaatttaaagaacttatatgtaactaaaataacttaaa 1173316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 236 - 482
Target Start/End: Original strand, 2633185 - 2633430
Alignment:
Q  236 ttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacan 335  Q
    |||||||| ||||||   |||| |||||||||||| ||| ||| | |||| ||||||||||||||||||| |||| ||| |  ||||||||||||||||     
T  2633185 ttattttgttcacacgtaagtcttttaagtttgagatttgtaatagattgttcatttaagttattttggttacacataaatcatttaagtttgtaaacat 2633284  T
Q  336 nnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtg 435  Q
          |||||||| |||||| |||||||| |||||||||||||||||||||| |||||||| ||| ||||  |||||||| |||||| ||||||| |||    
T  2633285 tttcg-atttagtcattctactacatcatcgtttttgtaatgtttggttaacataatgactaaattaaaaatgtttacaaatttaaaggacttatgcgtg 2633383  T
Q  436 accaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    || |||||||||||||| |  ||||| |||||||||||||| |||||    
T  2633384 acaaaaataacttaaagaacaaatatgttacaaacctcaaacttaaa 2633430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 258 - 482
Target Start/End: Original strand, 18981052 - 18981273
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctacc 357  Q
    |||||||||| || ||||||| |||||| |||| ||||||||||||||||||| |||||  ||||||||||||||||       |||| ||| |||||||    
T  18981052 ctttaagtttaagttttataataaattgatcatataagttattttggtcacacataagtcctttaagtttgtaaacattttcg-atttcgtctttctacc 18981150  T
Q  358 acatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatca 457  Q
    |||| |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||| ||||||| | |||  ||||||||||||| |||||    
T  18981151 acattatcatttttgtaatgtttggttaatagaatgacta-attgaaaacatttacaaacttaaataacttatatatgattaaaataacttaaa-gatca 18981248  T
Q  458 atattttacaaacctcaaatttaaa 482  Q
    || | | ||||| |||||| |||||    
T  18981249 atctgtaacaaatctcaaacttaaa 18981273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 191 - 543
Target Start/End: Complemental strand, 33650740 - 33650399
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcat 290  Q
    ||||||||| |||||| ||| |||| | ||||||| ||||||||   | |||| || ||||  |||||||||| |||| ||||| ||| | ||||||| |    
T  33650740 ggtcctttaagtttgaggttcgtaacagattgatcctttaagtt---actttgttcccacataagtcctttaactttgtggtttgtaagagattggtcct 33650644  T
Q  291 ttaagttattttggtcacacgtaagttgttt-aagtttgtaaacannnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacag 389  Q
    |||||||||||||||| ||| |||||  ||| ||||||||||||        ||||||||||||| |||||||||          ||||||||||||||     
T  33650643 ttaagttattttggtctcacataagtccttttaagtttgtaaac-gtttttgatttagtccttctgccacatcat----------atgtttggttaacat 33650555  T
Q  390 aatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataactt-aaaggatcaatattttacaaacctcaaatttaaatgactt 488  Q
    || ||||| |||||||  |||  ||||||||||| ||||| |||||||||||||||||| |||||| |||||| ||||| ||| |||| |||||||||||    
T  33650554 aaagactaaattgaaacgtttaccaaacttaaaggacttacgtgtgaccaaaataacttaaaaggaccaatatgttacataccacaaacttaaatgactt 33650455  T
Q  489 atatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    || || ||  |||||||||||||  || ||| | ||| |||| |||||||||||||    
T  33650454 atgtgggaacaaaataacttaaaggaccaatctgttataaacctcaaacttaaagg 33650399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 387 - 511
Target Start/End: Complemental strand, 52913298 - 52913173
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatat-tttacaaacctcaaatttaaatga 485  Q
    ||||||||||| || |||||| ||||||||||||||| ||||||||||||| | |||||||||||||| |||| | ||||||||||||||| ||||| ||    
T  52913298 cagaatgactaaatcgaaaacgtttacaaacttaaaggacttatgtgtgactagaataacttaaaggaccaatctgtttacaaacctcaaacttaaagga 52913199  T
Q  486 cttatatgtgactaaaataacttaaa 511  Q
    ||||| |||||| |||||||||||||    
T  52913198 cttatgtgtgaccaaaataacttaaa 52913173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 378 - 543
Target Start/End: Original strand, 26879571 - 26879737
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaat 477  Q
    ||||||||||| |||||||| ||||||||| |||| ||| |||||| || ||| ||||| |||||||||||||||||||||| | || ||||| |||||     
T  26879571 tttggttaacataatgactaaattgaaaacgtttaaaaatttaaaggacatatatgtgatcaaaataacttaaaggatcaatctgtttcaaacttcaaac 26879670  T
Q  478 ttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||| ||||||| |||||  |||||||||||||  || ||| | |||||||| |||||||||||||    
T  26879671 ttaaaagacttatgtgtgataaaaataacttaaatgaccaatctgttacaaacctcaaacttaaagg 26879737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 388 - 490
Target Start/End: Complemental strand, 18608735 - 18608633
Alignment:
Q  388 agaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    |||| ||||| ||||||||| ||||||||||||||| ||||| |||||||||||||||||||||| |||||| | |||||||||||||| ||||| ||||    
T  18608735 agaaggactaaattgaaaacatttacaaacttaaaggacttaagtgtgaccaaaataacttaaagaatcaatctgttacaaacctcaaacttaaaggact 18608636  T
Q  488 tat 490  Q
    |||    
T  18608635 tat 18608633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 358 - 541
Target Start/End: Complemental strand, 38699036 - 38698857
Alignment:
Q  358 acatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatca 457  Q
    |||||||| |||||||||| |||||||||||  ||||||| ||||||||| |||||||| |||||  |||  ||||||||||||||||||||    | ||    
T  38699036 acatcatcgtttttgtaatatttggttaacaacatgactaaattgaaaacgtttacaaatttaaaagactcgtgtgtgaccaaaataactta----acca 38698941  T
Q  458 atattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaaacaaatttattacaaacgtcaaacttaaa 541  Q
    || | ||||||| |||||| |||||  |||||||||| || |||||||| |||| |||||| | |||||||| | |||||||||    
T  38698940 atttgttacaaatctcaaagttaaacaacttatatgttaccaaaataacgtaaagacaaatctgttacaaaccttaaacttaaa 38698857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 360 - 452
Target Start/End: Original strand, 41007425 - 41007517
Alignment:
Q  360 atcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaag 452  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||  |||||| |||||||||| ||| ||||||    
T  41007425 atcatcatttttgtaatgtttgattaacagaatgactaaattgaaaacgtttacaaacttaaaagacttatatgtgaccaaattaatttaaag 41007517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 413 - 511
Target Start/End: Complemental strand, 7490031 - 7489933
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa 511  Q
    ||||||||||| | ||||||||||||||||||||||||| ||| ||| | |||||||||||||| ||||| ||||||| |||||||||||||| |||||    
T  7490031 caaacttaaaggatttatgtgtgaccaaaataacttaaatgattaatctgttacaaacctcaaacttaaaggacttatgtgtgactaaaataatttaaa 7489933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 240 - 541
Target Start/End: Original strand, 18608622 - 18608913
Alignment:
Q  240 tttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnn 339  Q
    |||||| |||||  ||||||||||||||||||||| ||||| |||| |  ||||||||||||||||||||| |||||  ||||||||||||||           
T  18608622 tttgataacacataagtcctttaagtttgaggtttgtaacagattgattctttaagttattttggtcacacttaagtcctttaagtttgtaaat-gtttt 18608720  T
Q  340 nnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgacca 439  Q
      ||||||||||||||||| |  |          | | |||||||||| |||  |||| ||||||||| ||||||||||||||| |||||| | ||| ||    
T  18608721 caatttagtccttctaccaaaata----------agtctttggttaaccgaagaactaaattgaaaacgtttacaaacttaaaggacttatctatgatca 18608810  T
Q  440 aaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaactt 538  Q
    ||||||||||||  |||||| | |||||||| |||||  |||| ||||||| |||||  |||||| ||||||  |||||||| ||| |||| | ||||||    
T  18608811 aaataacttaaaatatcaatctgttacaaacatcaaacgtaaacgacttatgtgtgatcaaaatagcttaaaggacaaatttgttataaaccttaaactt 18608910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 63 - 160
Target Start/End: Complemental strand, 29702580 - 29702482
Alignment:
Q  63 aagtaatcataatctgcaataaatgatatttatcatatacctttaaactattataggtgtatatacctgtt-aaaaataggtaataatctggtgtggca 160  Q
    |||| |||||||| ||||  |||| |||||||||||||||||||||||||||||||||||| |||||| || |||||| | ||||||||||||||||||    
T  29702580 aagttatcataatttgcacgaaataatatttatcatatacctttaaactattataggtgtacatacctattaaaaaatggataataatctggtgtggca 29702482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 430 - 543
Target Start/End: Complemental strand, 7490074 - 7489960
Alignment:
Q  430 tgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaa 528  Q
    |||||||||||||||| ||||||||||||| | |||||||||||||| ||||| || |||| |||||| |||||||||||||  |  ||| | |||||||    
T  7490074 tgtgtgaccaaaataatttaaaggatcaatctattacaaacctcaaacttaaaggatttatgtgtgaccaaaataacttaaatgattaatctgttacaaa 7489975  T
Q  529 cgtcaaacttaaagg 543  Q
    | |||||||||||||    
T  7489974 cctcaaacttaaagg 7489960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 357 - 511
Target Start/End: Original strand, 40892457 - 40892602
Alignment:
Q  357 cacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatc 456  Q
    ||||||||| ||||||||||||||||||||         || ||||||||| |||| ||||| |||  |||||||||||| | |||||||||||||   |    
T  40892457 cacatcatcgtttttgtaatgtttggttaat--------taaattgaaaacgtttaaaaactcaaatgacttatgtgtgatcgaaataacttaaagtc-c 40892547  T
Q  457 aatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa 511  Q
    ||| | |||||||||||||||||||| ||||||| |||||| |||||||||||||    
T  40892548 aatctgttacaaacctcaaatttaaaggacttatgtgtgaccaaaataacttaaa 40892602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 420 - 516
Target Start/End: Original strand, 18204925 - 18205020
Alignment:
Q  420 aaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaaacaa 516  Q
    ||||||||||||||||||||||||||  ||||  |||||||| |||||||||||||| ||||| ||  ||| | |||||||||||||||||||||||    
T  18204925 aaagaacttatgtgtgaccaaaataatctaaaa-atcaatatgttacaaacctcaaacttaaaagatctatgtatgactaaaataacttaaaaacaa 18205020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 413 - 476
Target Start/End: Original strand, 40892564 - 40892627
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaa 476  Q
    |||| |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  40892564 caaatttaaaggacttatgtgtgaccaaaataacttaaatgatcaatatgttacaaacctcaaa 40892627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 196 - 328
Target Start/End: Original strand, 7489902 - 7490031
Alignment:
Q  196 tttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaag 295  Q
    |||| |||||| |||||| | | ||||||||||||| ||   |||||  |||||||  ||||||||||||||||||||| ||||| |||  |||||||||    
T  7489902 tttaagtttgaggtttgtgagagattgatcatttaaatt---attttagtcacacataagtcctttaagtttgaggtttgtaacagattaatcatttaag 7489998  T
Q  296 ttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||||||| ||| |  ||||||||||    
T  7489999 ttattttggtcacacataaatcctttaagtttg 7490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 33650397 - 33650471
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgt 329  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||| || ||| |||||  |||||||||||    
T  33650397 gtcctttaagtttgaggtttataacagattggtcctttaagttattttgttcccacataagtcatttaagtttgt 33650471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 26879739 - 26879666
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||  |||||| |||||  ||||||||||    
T  26879739 gtcctttaagtttgaggtttgtaacagattggtcatttaagttatttttatcacacataagtcttttaagtttg 26879666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 403 - 511
Target Start/End: Original strand, 33650595 - 33650704
Alignment:
Q  403 aaaacttttacaaacttaaa-gaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaa 501  Q
    ||||| |||||||||||||| | ||||||||| |||||||||||||||||||| |||| | ||||||||| |||| ||||| ||||||| || ||  |||    
T  33650595 aaaacgtttacaaacttaaaaggacttatgtgagaccaaaataacttaaaggaccaatctcttacaaaccacaaagttaaaggacttatgtgggaacaaa 33650694  T
Q  502 ataacttaaa 511  Q
     |||||||||    
T  33650695 gtaacttaaa 33650704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 359 - 456
Target Start/End: Complemental strand, 41007177 - 41007081
Alignment:
Q  359 catcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatc 456  Q
    |||||||||||||||||  ||| ||||||| |||||||| ||||||||  |||||||||||||| |||||| ||||||| ||||||||| ||| ||||    
T  41007177 catcatcatttttgtaacatttcgttaacataatgactaaattgaaaaaatttacaaacttaaa-aacttacgtgtgactaaaataactcaaatgatc 41007081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 192 - 310
Target Start/End: Original strand, 7489958 - 7490073
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||||| |||||| |||||||| | ||| ||||||||||||   |||||| |||||||  | ||||||||||||||||||| ||| | |||| || ||    
T  7489958 gtcctttaagtttgaggtttgtaacagattaatcatttaagtt---attttggtcacacataaatcctttaagtttgaggtttgtaatagattgatcctt 7490054  T
Q  292 taagttattttggtcacac 310  Q
    ||| |||||||||||||||    
T  7490055 taaattattttggtcacac 7490073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 191 - 333
Target Start/End: Complemental strand, 40892638 - 40892500
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcat 290  Q
    ||||||||  |||||| |||||||| | |||||||||||||   ||||||||| |||||||  |||||||||| |||||||||| ||||| ||||| | |    
T  40892638 ggtcctttgagtttgaggtttgtaacatattgatcatttaa---gttattttggtcacacataagtcctttaaatttgaggtttgtaacagattggac-t 40892543  T
Q  291 ttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||||| | |||||| |||||  ||| ||||| |||||    
T  40892542 ttaagttatttcgatcacacataagtcatttgagtttttaaac 40892500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 409 - 543
Target Start/End: Original strand, 50727572 - 50727708
Alignment:
Q  409 tttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaattt-aaatgacttatatgtgactaaaataact 507  Q
    |||||||| |||||| | |  |||||||| ||||||||||||| ||  ||| | |||||||||| |||||| ||| ||||||| || |||||||||||||    
T  50727572 tttacaaatttaaaggattcgtgtgtgactaaaataacttaaaagacaaatctgttacaaaccttaaatttaaaaggacttatgtgcgactaaaataact 50727671  T
Q  508 taaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||  |||||||| ||| |||| |||||||||||||    
T  50727672 taaatgacaaatttgttagaaacctcaaacttaaagg 50727708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 254 - 309
Target Start/End: Complemental strand, 2633602 - 2633547
Alignment:
Q  254 agtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcaca 309  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  2633602 agtcctttaagtttgaggtttgtgacagattggtcatttaagttattttggtcaca 2633547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 409 - 512
Target Start/End: Complemental strand, 18981126 - 18981024
Alignment:
Q  409 tttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataactt 508  Q
    ||||||||||||||| ||||||||||||||||||||||||| | ||||||| | ||| ||| || ||| ||||| ||||||  |||||| ||||||| ||    
T  18981126 tttacaaacttaaaggacttatgtgtgaccaaaataacttatatgatcaatttattataaaacttaaacttaaa-gacttaggtgtgaccaaaataattt 18981028  T
Q  509 aaaa 512  Q
    ||||    
T  18981027 aaaa 18981024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 418 - 541
Target Start/End: Complemental strand, 52913160 - 52913034
Alignment:
Q  418 ttaaagaacttatgtgtgaccaaaataacttaaaggatcaatat-tttacaaacctcaaa-tttaaatgacttatatgtgactaaaataacttaaa-aac 514  Q
    |||||| ||||||||||||||| ||||||||||| || |||| | ||||||||||||||| || ||| || |||| |||||| |||||||||||||  ||    
T  52913160 ttaaaggacttatgtgtgaccagaataacttaaatgaccaatctgtttacaaacctcaaacttaaaaggatttatgtgtgaccaaaataacttaaaggac 52913061  T
Q  515 aaatttattacaaacgtcaaacttaaa 541  Q
     ||| | |||||||| |||||||||||    
T  52913060 taatctgttacaaacttcaaacttaaa 52913034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 388 - 489
Target Start/End: Complemental strand, 2633302 - 2633201
Alignment:
Q  388 agaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    |||||||||| || |||||  ||||||||||||||  | |||||||| |||||||||||||||| || |||| | ||||||| |||||| ||||| ||||    
T  2633302 agaatgactaaatcgaaaatgtttacaaacttaaatgatttatgtgtaaccaaaataacttaaatgaacaatctattacaaatctcaaacttaaaagact 2633203  T
Q  488 ta 489  Q
    ||    
T  2633202 ta 2633201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 328
Target Start/End: Original strand, 33650395 - 33650531
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| |||||| |||| ||| | |||| || ||||||||   |||||| || ||||  |||| |||||||||| ||| | ||||| |||||||     
T  33650395 gggtcctttaagtttgaggtttataacagattggtcctttaagtt---attttgttcccacataagtcatttaagtttgtggtatgtaacatattggtcc 33650491  T
Q  290 ttt-aagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||| ||||||||||||||||||||||||  ||||||||||    
T  33650492 ttttaagttattttggtcacacgtaagtcctttaagtttg 33650531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 1173168 - 1173105
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaa 451  Q
    ||||||||||| || |||||  |||||||||||||||| ||||||||||||||||||||||||||    
T  1173168 cagaatgactaaatcgaaaatgtttacaaacttaaaga-cttatgtgtgaccaaaataacttaaa 1173105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 191 - 309
Target Start/End: Complemental strand, 26879740 - 26879625
Alignment:
Q  191 ggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcat 290  Q
    ||||||||| |||||| |||||||| | |||| |||||||||||   ||||| ||||||||  |||| ||||||||||| ||||  |||| |||| || |    
T  26879740 ggtcctttaagtttgaggtttgtaacagattggtcatttaagtt---atttttatcacacataagtcttttaagtttgaagtttgaaacagattgatcct 26879644  T
Q  291 ttaagttattttggtcaca 309  Q
    ||||||||||||| |||||    
T  26879643 ttaagttattttgatcaca 26879625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 50727709 - 50727649
Alignment:
Q  256 tcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagt 316  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||| ||| ||| |||||    
T  50727709 tcctttaagtttgaggtttctaacaaatttgtcatttaagttattttagtcgcacataagt 50727649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 413 - 461
Target Start/End: Complemental strand, 52913211 - 52913163
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatat 461  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  52913211 caaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatat 52913163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 413 - 484
Target Start/End: Complemental strand, 7489971 - 7489900
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatg 484  Q
    ||||||||||| ||||||||||||| ||||||| ||||| ||||||| | | |||||||||||| |||||||    
T  7489971 caaacttaaaggacttatgtgtgactaaaataatttaaatgatcaatctctcacaaacctcaaacttaaatg 7489900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 331
Target Start/End: Original strand, 34173315 - 34173393
Alignment:
Q  253 gagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaa 331  Q
    ||||||||||||||||| |||| ||||| ||||||| |||||||||||||||| |||  |||||  ||||| |||||||    
T  34173315 gagtcctttaagtttgatgtttgtaacagattggtcctttaagttattttggttacaaataagtcctttaaatttgtaa 34173393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 52913028 - 52913153
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtccttt-aagtttgaggtttataa-caaattggt 287  Q
    ||||| |||| ||||||||||||||| | |||  || ||||||||   |||||| |||||||  | |||||| ||||||||||||| ||| || ||||||    
T  52913028 gggtcttttaagtttgaagtttgtaacagattagtcctttaagtt---attttggtcacacataaatccttttaagtttgaggtttgtaaacagattggt 52913124  T
Q  288 catttaagttattttggtcacacgtaagt 316  Q
    ||||||||||||| ||||||||| |||||    
T  52913125 catttaagttattctggtcacacataagt 52913153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 259 - 328
Target Start/End: Complemental strand, 18608913 - 18608844
Alignment:
Q  259 tttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||| |||||| ||||| ||||| |||||    
T  18608913 tttaagtttaaggtttataacaaatttgtcctttaagctattttgatcacacataagtcgtttacgtttg 18608844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 410 - 487
Target Start/End: Complemental strand, 34173393 - 34173316
Alignment:
Q  410 ttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    ||||||| |||||| |||||| ||| ||||||||||||||||||| |||| | |||||||| ||||| ||||| ||||    
T  34173393 ttacaaatttaaaggacttatttgtaaccaaaataacttaaaggaccaatctgttacaaacatcaaacttaaaggact 34173316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 255 - 332
Target Start/End: Original strand, 41007051 - 41007127
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    |||||||||||||||| |||||||   || | |||||| ||||||||| |||||||||||||| ||||||||||||||    
T  41007051 gtcctttaagtttgagatttataattgatagatcatttgagttattttagtcacacgtaagtt-tttaagtttgtaaa 41007127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 359 - 423
Target Start/End: Original strand, 38699114 - 38699178
Alignment:
Q  359 catcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaag 423  Q
    ||||||| ||||||||| ||||||||||| ||| || || ||||||||| |||||||||||||||    
T  38699114 catcatcgtttttgtaacgtttggttaaccgaaggattaaattgaaaacgtttacaaacttaaag 38699178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 542
Target Start/End: Original strand, 2633361 - 2633431
Alignment:
Q  473 caaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaag 542  Q
    |||||||||| |||||||  ||||| ||||||||||||| ||||||| | |||||||| ||||||||||||    
T  2633361 caaatttaaaggacttatgcgtgacaaaaataacttaaagaacaaatatgttacaaacctcaaacttaaag 2633431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 33650665 - 33650735
Alignment:
Q  412 acaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 482  Q
    ||||| |||||| ||||||||| || |||| ||||||||||||||||| | |||| ||||||||| |||||    
T  33650665 acaaagttaaaggacttatgtgggaacaaagtaacttaaaggatcaatctgttacgaacctcaaacttaaa 33650735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 425 - 490
Target Start/End: Original strand, 2633540 - 2633605
Alignment:
Q  425 acttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttat 490  Q
    |||||| |||||||||||||||||||| || |||| | | |||||||||||| ||||| |||||||    
T  2633540 acttatatgtgaccaaaataacttaaatgaccaatctgtcacaaacctcaaacttaaaggacttat 2633605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 334
Target Start/End: Complemental strand, 2633431 - 2633355
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
    ||||||||||||||||| ||||| ||| ||  ||||||||||||| ||||| | |||||  ||||| ||||||||||    
T  2633431 ctttaagtttgaggtttgtaacatatttgttctttaagttatttttgtcacgcataagtcctttaaatttgtaaaca 2633355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 237 - 333
Target Start/End: Complemental strand, 18608875 - 18608779
Alignment:
Q  237 tattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    |||||||||||||||  |||| |||| |||||| |||| ||||| |||| |  |||||||||||||| ||| |  |||||  |||||||||||||||    
T  18608875 tattttgatcacacataagtcgtttacgtttgatgtttgtaacagattgatattttaagttattttgatcatagataagtcctttaagtttgtaaac 18608779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 476
Target Start/End: Original strand, 1173278 - 1173341
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaa 476  Q
    |||| ||||||||||||| ||| || ||||||||||||||  ||||| | ||||||||||||||    
T  1173278 caaatttaaagaacttatatgtaactaaaataacttaaagtttcaatctattacaaacctcaaa 1173341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 514
Target Start/End: Complemental strand, 30611967 - 30611920
Alignment:
Q  467 aaacctcaaatttaaatgacttatatgtgactaaaataacttaaaaac 514  Q
    |||| ||||||||||| || |||| |||||||||||||||||||||||    
T  30611967 aaacatcaaatttaaaggatttatgtgtgactaaaataacttaaaaac 30611920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 404 - 487
Target Start/End: Original strand, 36956472 - 36956555
Alignment:
Q  404 aaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    |||| |||||||||| |||  ||||  ||||||||||||||||||||| ||| ||| ||||| |||| ||||| ||||| ||||    
T  36956472 aaacatttacaaactcaaaagacttgagtgtgaccaaaataacttaaacgatgaatgttttataaacttcaaacttaaaagact 36956555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 36956556 - 36956477
Alignment:
Q  253 gagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    ||||| ||||||||||| |||||||| | |||  || |||||||||||||||||||||  ||||  ||| ||||||||||    
T  36956556 gagtcttttaagtttgaagtttataaaacattcatcgtttaagttattttggtcacactcaagtcttttgagtttgtaaa 36956477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 328
Target Start/End: Original strand, 52913160 - 52913211
Alignment:
Q  277 aacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||| ||||||| ||||||||||||||||||||| |||||  ||||||||||    
T  52913160 aacatattggtcctttaagttattttggtcacacataagtcctttaagtttg 52913211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 574
Target Start/End: Original strand, 52913356 - 52913458
Alignment:
Q  473 caaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaaggttattcggtgtaacttagcctaaaaaat 571  Q
    |||| ||||| ||||||| |||||  ||||||||| ||| ||| ||||||||||||   | |||||||||||    | ||||||||||||||||||||||    
T  52913356 caaacttaaaggacttatgtgtgatcaaaataactcaaagaactaatttattacaagtctgaaacttaaaggactcttggtgtaacttagcctaaaaaat 52913455  T
Q  572 aat 574  Q
    |||    
T  52913456 aat 52913458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 541
Target Start/End: Complemental strand, 1173132 - 1173075
Alignment:
Q  484 gacttatatgtgactaaaataacttaaaaacaaatttattacaaacgtcaaacttaaa 541  Q
    ||||||| |||||| |||||||||||||||| ||| | ||| |||| |||||||||||    
T  1173132 gacttatgtgtgaccaaaataacttaaaaactaatctgttataaacctcaaacttaaa 1173075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 79; Significance: 1e-36; HSPs: 4)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 378 - 543
Target Start/End: Original strand, 1105 - 1271
Alignment:
Q  378 tttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaat 477  Q
    ||||| || ||||| ||| | ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||   |||||||  |||||     
T  1105 tttggctagcagaaggacaaaattgaaaacttttacaaacttaaaggacttatgtgtgaccaaaataacctaaaggaccaatcagttacaaatatcaaac 1204  T
Q  478 ttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtcaaacttaaagg 543  Q
    ||||||||||||| |||||| |||||||||||||  || ||| | ||||||||||||||||||||||    
T  1205 ttaaatgacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacgtcaaacttaaagg 1271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 1275 - 1200
Alignment:
Q  253 gagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    ||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||| |||||  ||||||||||    
T  1275 gagtcctttaagtttgacgtttgtaacagattggtcctttaagttattttggtcacacataagtcatttaagtttg 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 192 - 332
Target Start/End: Complemental strand, 1273 - 1136
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||||| |||||| |||||||| | |||| || ||||||||   |||||| |||||||  |||| |||||||||||  ||| ||||  ||||||| ||    
T  1273 gtcctttaagtttgacgtttgtaacagattggtcctttaagtt---attttggtcacacataagtcatttaagtttgatatttgtaactgattggtcctt 1177  T
Q  292 taagttattttggtcacacgtaagttgtttaagtttgtaaa 332  Q
    || |||||||||||||||| |||||  ||||||||||||||    
T  1176 taggttattttggtcacacataagtcctttaagtttgtaaa 1136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 413 - 487
Target Start/End: Original strand, 1200 - 1274
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    ||||||||||  |||||||||||||||||||||||||||||| |||| | |||||||| ||||| ||||| ||||    
T  1200 caaacttaaatgacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacgtcaaacttaaaggact 1274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 78; Significance: 6e-36; HSPs: 3)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 257 - 451
Target Start/End: Complemental strand, 2667 - 2475
Alignment:
Q  257 cctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaacannnnnnnatttagtccttctac 356  Q
    |||||||||||||||||||||||| |||| | |||||||||| |||  | |||| |||||| |||||||||||||||        ||||| || || |||    
T  2667 cctttaagtttgaggtttataacagattgtt-atttaagttacttttataacacataagttctttaagtttgtaaac-gttttcaatttattcgttatac 2570  T
Q  357 cacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaa 451  Q
    || |||||| |||||||||||||||||||| |||| |||||||| | |||| ||||||||||||||||||||||||||||| ||||||| |||||    
T  2569 catatcatcgtttttgtaatgtttggttaatagaaggactagataggaaacgtttacaaacttaaagaacttatgtgtgactaaaataaattaaa 2475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 399 - 536
Target Start/End: Original strand, 2583 - 2720
Alignment:
Q  399 attgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgact 498  Q
    ||||||||| |||||||||||||||||||||||||| |  ||| |||||||||  | |||| | ||| |||||||||| ||||| | ||||||||| ||     
T  2583 attgaaaacgtttacaaacttaaagaacttatgtgttataaaagtaacttaaa-taacaatctgttataaacctcaaacttaaaggtcttatatgtaacc 2681  T
Q  499 aaaataacttaaa-aacaaatttattacaaacgtcaaac 536  Q
    |||||||| |||| ||| | ||| |||||||| ||||||    
T  2682 aaaataacgtaaagaaccattttcttacaaacctcaaac 2720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 255 - 333
Target Start/End: Original strand, 2440 - 2518
Alignment:
Q  255 gtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||||||||||||||| ||||| || | ||| | ||||||| ||||||| ||||||| |||||| |||||||||||||||    
T  2440 gtcctttaagtttgaagtttacaaaagattagacatttaatttattttagtcacacataagttctttaagtttgtaaac 2518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 73; Significance: 6e-33; HSPs: 5)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 387 - 540
Target Start/End: Original strand, 21699 - 21854
Alignment:
Q  387 cagaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    ||||| ||||| |||||||  |||||||||||||||| | ||||||||||||||||||||||||| ||||||||| || ||||||| ||| ||||| |||    
T  21699 cagaaggactaaattgaaattttttacaaacttaaaggatttatgtgtgaccaaaataacttaaaagatcaatatattgcaaaccttaaacttaaaagac 21798  T
Q  487 ttatatgtgactaaaataacttaaaa--acaaatttattacaaacgtcaaacttaa 540  Q
    |||| |||||| ||||||||||||||  || ||| |||||||||| ||||| ||||    
T  21799 ttatgtgtgacaaaaataacttaaaaggaccaatctattacaaacctcaaatttaa 21854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 235 - 543
Target Start/End: Complemental strand, 21818 - 21521
Alignment:
Q  235 gttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
    ||||||||  |||||||  |||| ||||||||| ||||||  || | |||| || ||||||||||||||||||||| ||| |  |||||||||||||| |    
T  21818 gttatttttgtcacacataagtcttttaagtttaaggtttgcaatatattgatcttttaagttattttggtcacacataaatcctttaagtttgtaaa-a 21720  T
Q  335 nnnnnnnatttagtccttctaccacatcatcatttttgtaatgtttggttaacagaatgactagattgaaaacttttacaaacttaaagaacttatgtgt 434  Q
           ||||||||||||| |||||||||| ||||||||||           |||| ||||| || |||||| |||||||| |||||  ||||||||||    
T  21719 aatttcaatttagtccttctgccacatcatcttttttgtaat-----------agaaggactaaatcgaaaacgtttacaaatttaaaagacttatgtgt 21631  T
Q  435 gaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaa-aacaaatttattacaaacgtca 533  Q
    |||| |||||| ||||||||| | | | ||||||| |||||| ||||| ||||||| ||||| ||||||||||||||  |  ||| |||||||||| |||    
T  21630 gaccgaaataatttaaaggattagtctgttacaaatctcaaacttaaaggacttatgtgtgattaaaataacttaaatgatcaatctattacaaacctca 21531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 192 - 333
Target Start/End: Original strand, 21519 - 21657
Alignment:
Q  192 gtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtcatt 291  Q
    |||||||| |||||| |||||||||| ||||||||||||||||   ||||| ||||||||  ||||||||||||||||| ||| ||||| | |  || ||    
T  21519 gtcctttaagtttgaggtttgtaatagattgatcatttaagtt---attttaatcacacataagtcctttaagtttgagatttgtaacagactaatcctt 21615  T
Q  292 taagttattttggtcacacgtaagttgtttaagtttgtaaac 333  Q
    ||| |||||| |||||||| |||||  ||||| |||||||||    
T  21616 taaattatttcggtcacacataagtcttttaaatttgtaaac 21657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 413 - 487
Target Start/End: Complemental strand, 21592 - 21518
Alignment:
Q  413 caaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgact 487  Q
    ||||||||||| ||||||||||||  ||||||||||||| ||||||| | |||||||||||||| ||||| ||||    
T  21592 caaacttaaaggacttatgtgtgattaaaataacttaaatgatcaatctattacaaacctcaaacttaaaggact 21518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 21517 - 21592
Alignment:
Q  253 gagtcctttaagtttgaggtttataacaaattggtcatttaagttattttggtcacacgtaagttgtttaagtttg 328  Q
    |||||||||||||||||||||| ||| | |||| ||||||||||||||||  |||||| |||||  ||||||||||    
T  21517 gagtcctttaagtttgaggtttgtaatagattgatcatttaagttattttaatcacacataagtcctttaagtttg 21592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 59; Significance: 1e-24; HSPs: 5)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 373 - 541
Target Start/End: Original strand, 12212 - 12377
Alignment:
Q  373 taatgtttggttaaca-gaatgactagattgaaaacttttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacc 471  Q
    |||||||||||||||| ||| ||||| ||||||||| |||||||| |||||  | |||||||  | |||||||| |||||| | |||| | |||||||||    
T  12212 taatgtttggttaacaagaaggactaaattgaaaacatttacaaatttaaaagatttatgtg--atcaaaataagttaaag-accaatctgttacaaacc 12308  T
Q  472 tcaaatttaaatgacttatatgtgactaaaataacttaaaaacaaatttattacaaacgtcaaacttaaa 541  Q
    ||||| |||| ||||||||||||||  |||||||||||||| | ||| |||||||||| |||||||||||    
T  12309 tcaaacttaattgacttatatgtgatcaaaataacttaaaatc-aatctattacaaacctcaaacttaaa 12377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 409 - 543
Target Start/End: Complemental strand, 12184 - 12052
Alignment:
Q  409 tttacaaacttaaagaacttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataactt 508  Q
    ||||||||||||||| |||| |||||||| |||||||||| ||||| |||| | ||||||| |||||| ||||| |   ||| |||||| ||||||||||    
T  12184 tttacaaacttaaaggacttgtgtgtgacaaaaataactt-aaggaccaatttgttacaaatctcaaacttaaagggtatatgtgtgaccaaaataactt 12086  T
Q  509 aaaaacaaatttattacaaacgtcaaacttaaagg 543  Q
      |||| |||||||||||||| |||||||||||||    
T  12085 -gaaaccaatttattacaaacctcaaacttaaagg 12052  T

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Target: scaffold0002; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 334
Target Start/End: Original strand, 12048 - 12186
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    |||||||||| |||||| ||||||||||||||| |  || |||||   |||||| |||||||     |||||||||||||| ||| |||||||||||||     
T  12048 gggtcctttaagtttgaggtttgtaataaattggt--ttcaagtt---attttggtcacacatataccctttaagtttgagatttgtaacaaattggtc- 12141  T
Q  290 tttaagttattttggtcacacgtaagttgtttaagtttgtaaaca 334  Q
     |||||||||||| |||||||  ||||  ||||||||||||||||    
T  12142 cttaagttatttttgtcacacacaagtcctttaagtttgtaaaca 12186  T

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Target: scaffold0002; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 309
Target Start/End: Complemental strand, 12383 - 12270
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataacaaattggtca 289  Q
    ||||| |||| |||||| |||||||||| ||||||  ||||||||   |||||||||||| |  ||||  ||||||||||||||| ||||| |||||||     
T  12383 gggtcatttaagtttgaggtttgtaatagattgat--tttaagtt---attttgatcacatataagtcaattaagtttgaggtttgtaacagattggtc- 12290  T
Q  290 tttaagttattttggtcaca 309  Q
    ||||| |||||||| |||||    
T  12289 tttaacttattttgatcaca 12270  T

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Target: scaffold0002; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 425 - 486
Target Start/End: Original strand, 12322 - 12381
Alignment:
Q  425 acttatgtgtgaccaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgac 486  Q
    |||||| ||||| ||||||||||||||  |||||| | |||||||||||||| |||||||||    
T  12322 acttatatgtgatcaaaataacttaaa--atcaatctattacaaacctcaaacttaaatgac 12381  T

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Target: scaffold0578 (Bit Score: 39; Significance: 0.000000000001; HSPs: 4)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 463 - 542
Target Start/End: Original strand, 2436 - 2517
Alignment:
Q  463 ttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaa--acaaatttattacaaacgtcaaacttaaag 542  Q
    ||||||||| |||| ||||||||||||| |||||  ||||||||||||||  || ||| |||||||||| ||||||||||||    
T  2436 ttacaaaccacaaacttaaatgacttatgtgtgaacaaaataacttaaaaggaccaatctattacaaacctcaaacttaaag 2517  T

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Target: scaffold0578; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 2445 - 2516
Alignment:
Q  412 acaaacttaaagaacttatgtgtgaccaaaataactt-aaaggatcaatattttacaaacctcaaatttaaa 482  Q
    |||||||||||  |||||||||||| ||||||||||| |||||| |||| | |||||||||||||| |||||    
T  2445 acaaacttaaatgacttatgtgtgaacaaaataacttaaaaggaccaatctattacaaacctcaaacttaaa 2516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 190 - 310
Target Start/End: Complemental strand, 2522 - 2400
Alignment:
Q  190 gggtcctttatgtttgaagtttgtaataaattgatcatttaagttgttattttgatcacacacgagtcctttaagtttgaggtttataaca----aattg 285  Q
    |||| ||||| |||||| |||||||||| |||| || ||| |   ||||||||| |||||||  |||| |||||||||| ||||| |||||    ||||     
T  2522 gggttctttaagtttgaggtttgtaatagattggtccttttaa--gttattttgttcacacataagtcatttaagtttgtggtttgtaacagattaattt 2425  T
Q  286 gtcatttaagttattttggtcacac 310  Q
    |||||||||||||||||| ||||||    
T  2424 gtcatttaagttattttgatcacac 2400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 329
Target Start/End: Complemental strand, 2517 - 2445
Alignment:
Q  258 ctttaagtttgaggtttataacaaattggtcattt-aagttattttggtcacacgtaagttgtttaagtttgt 329  Q
    ||||||||||||||||| ||| | ||||||| ||| ||||||||||| |||||| |||||  |||||||||||    
T  2517 ctttaagtttgaggtttgtaatagattggtccttttaagttattttgttcacacataagtcatttaagtttgt 2445  T

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Target: scaffold0380 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 5077 - 5003
Alignment:
Q  88 atatttatcatatacctttaaactattataggtgtatatacctgtt-aaaaataggtaataatctggtgtggcac 161  Q
    |||||||| ||||| ||||||||||| ||||| |||||||||| || |||||| ||||||||||| |||||||||    
T  5077 atatttattatatagctttaaactataataggggtatatacctattaaaaaatgggtaataatctagtgtggcac 5003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1191 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1191
Description:

Target: scaffold1191; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 541
Target Start/End: Complemental strand, 1322 - 1243
Alignment:
Q  463 ttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaa-acaaatttattacaaacgtcaaacttaaa 541  Q
    |||||||| || ||||| ||  ||||||||||||||||||||||| |||| || ||| ||||| |||| |||||||||||    
T  1322 ttacaaacatctaatttgaagaacttatatgtgactaaaataactaaaaagacgaatatattataaacctcaaacttaaa 1243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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