View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2242_high_6 (Length: 315)
Name: NF2242_high_6
Description: NF2242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2242_high_6 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 24)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 5160110 - 5160408
Alignment:
| Q |
1 |
ttgatagcttaacccgcctcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttca |
100 |
Q |
| |
|
||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
5160110 |
ttgataggttaaccagactcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgtttcgaaaacgaaagactatgattttca |
5160209 |
T |
 |
| Q |
101 |
ccttttgaatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttccg |
200 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||||| ||| |||||| ||||||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
5160210 |
ccttttgaatgg-agctcagtcaaggttcccttcatgac---cagcgaggagaatcagtttattgaagcttatgacgactttaaagttcttcgtcttccg |
5160305 |
T |
 |
| Q |
201 |
tataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggtggcttctgaat |
300 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
5160306 |
tataagaaaggcaaagataagcgtccattctctatgtacattttccttccaaatgcaaaagatggcttgtcgactttggttaagaaggtggcttctgaat |
5160405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 5156080 - 5156341
Alignment:
| Q |
1 |
ttgatagcttaacccgcctcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5156080 |
ttgatagcttaacccgcctcatctttgctaatgcactctactttaaaggagcatggagtgagaagtttgatgttttgaaaacgaaagactatgattttca |
5156179 |
T |
 |
| Q |
101 |
ccttttgaatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttccg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||| |||||||| | |||||||||||||||||||||| |
|
|
| T |
5156180 |
ccttttgaatggcagctcggtcaaggttcccttcat---gaccagcgaggagaatcagtttattgaagcttatggtggctttaaagttcttcgtcttccg |
5156276 |
T |
 |
| Q |
201 |
tataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatgg |
265 |
Q |
| |
|
||||| |||||||||||||||| || |||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
5156277 |
tataaaaaaggcaaagataagcgtcgattctctatgtacatttttcttccaaatgctaaagatgg |
5156341 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 11 - 303
Target Start/End: Original strand, 46479635 - 46479924
Alignment:
| Q |
11 |
aacccgcctcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttcaccttttgaat |
110 |
Q |
| |
|
|||||| ||||||||||| |||||||| ||||| |||||||| |||| |||||||||||||| || |||||| ||||||| || ||||||||||||||| |
|
|
| T |
46479635 |
aacccggctcatctttgccaatgcactatacttcaaaggagcgtggaatgataagtttgatgcttcaaaaacggaagactacgagtttcaccttttgaat |
46479734 |
T |
 |
| Q |
111 |
ggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttccgtataagaaag |
210 |
Q |
| |
|
|| ||| | ||||||||||||||||| |||||| ||| ||| ||||||||||| ||||| | | | ||||||||||| ||||||| |||||| ||| |
|
|
| T |
46479735 |
ggtagcccagtcaaggttcccttcat---gaccagcaagaagaagcagtttattagagcttttgatggttttaaagttctcggtcttccttataagcaag |
46479831 |
T |
 |
| Q |
211 |
gcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggtggcttctgaatctg |
303 |
Q |
| |
|
|| ||||||||| || |||| | |||||| |||| |||||||||||||||||||| ||| | |||||||| | ||||||||||||||||||| |
|
|
| T |
46479832 |
gcgaagataagcgtcaattcaccatgtacttttttcttccaaatgcaaaagatgggttggcagctttggtcgaaaaggtggcttctgaatctg |
46479924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 4 - 265
Target Start/End: Original strand, 46490547 - 46490805
Alignment:
| Q |
4 |
atagcttaacccgcctcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttcacct |
103 |
Q |
| |
|
||||||||||| | || ||| ||||||||||||| ||||| ||||||| |||| |||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
46490547 |
atagcttaaccaggctaatcattgctaatgcactatacttcaaaggagtgtggaatgataagtttgatgcttcaaaaacgaaagactatgattttcacct |
46490646 |
T |
 |
| Q |
104 |
tttgaatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttccgtat |
203 |
Q |
| |
|
||||||||||||||| | |||||||||||||| ||| || ||||| || | ||||| ||||| | || |||||||||||| | ||||| ||| |
|
|
| T |
46490647 |
tttgaatggcagctcaattaaggttcccttcat---gactagcaaggaagaacaatatattagagctttcgatgattttaaagttcttggccttccttat |
46490743 |
T |
 |
| Q |
204 |
aagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatgg |
265 |
Q |
| |
|
||| ||||| ||||||||| | ||| |||||||| |||| |||||||||||||||||||| |
|
|
| T |
46490744 |
aagcaaggcgaagataagcgtgaatttactatgtacttttttcttccaaatgcaaaagatgg |
46490805 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 77 - 277
Target Start/End: Original strand, 51943801 - 51943998
Alignment:
| Q |
77 |
gaaaacgaaagactatgattttcaccttttgaatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataac |
176 |
Q |
| |
|
|||||| ||||| ||||||||||||||| | ||||| ||||| |||||||||||||||||||| ||| || ||| |||||||||| ||| |||| | |
|
|
| T |
51943801 |
gaaaactaaagattatgattttcaccttctaaatggtagctcagtcaaggttcccttcatgac---cagcaataagaagcagtttattgaagtttatgat |
51943897 |
T |
 |
| Q |
177 |
gactttaaagttcttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctt |
276 |
Q |
| |
|
|| ||||||||||||| |||||| ||||||||||| ||||||||| | |||||||||||| |||| |||||||||||||||||||| ||||| |||| |
|
|
| T |
51943898 |
gattttaaagttcttcatcttccttataagaaaggtgaagataagcgccaattctctatgtatttttttcttccaaatgcaaaagatgggttgtcagctt |
51943997 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 78 - 265
Target Start/End: Original strand, 46483960 - 46484144
Alignment:
| Q |
78 |
aaaacgaaagactatgattttcaccttttgaatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacg |
177 |
Q |
| |
|
||||| ||||||||||||||||||||| | ||||||||||| |||||||||||||| ||||| | || || ||| ||||||||||| ||||| | | | |
|
|
| T |
46483960 |
aaaacaaaagactatgattttcaccttctcaatggcagctcagtcaaggttccctttatgactagca---agaagaagcagtttattagagcttttgatg |
46484056 |
T |
 |
| Q |
178 |
actttaaagttcttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatgg |
265 |
Q |
| |
|
|||||||||||| ||||||| |||||| ||||| ||||||||| || ||| |||||||| |||| |||||||||||||||||||| |
|
|
| T |
46484057 |
gttttaaagttcttggtcttccttataagcaaggcgaagataagcgtcgtttcactatgtacttttttcttccaaatgcaaaagatgg |
46484144 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 22 - 303
Target Start/End: Original strand, 46473785 - 46474063
Alignment:
| Q |
22 |
tctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttcaccttttgaatggcagctcggt |
121 |
Q |
| |
|
|||||||||||||| | || ||||||||| |||||| | | ||| |||||| || | ||| ||||||||||||||| ||||| | ||||||||||| || |
|
|
| T |
46473785 |
tctttgctaatgcattgtattttaaaggatcatggaatcagaagattgatgcttcaacaacaaaagactatgatttttaccttctcaatggcagctcagt |
46473884 |
T |
 |
| Q |
122 |
caaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttccgtataagaaaggcaaagataag |
221 |
Q |
| |
|
|||||| |||| ||||| | || || ||| ||||||||||| ||||| | | | |||||||||||| ||||||| |||||| ||||| |||||||| |
|
|
| T |
46473885 |
taaggtttcctttatgactagca---agaagaagcagtttattagagcttttgatggttttaaagttcttggtcttccttataagcaaggcgaagataag |
46473981 |
T |
 |
| Q |
222 |
cttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggtggcttctgaatctg |
303 |
Q |
| |
|
| || ||| |||||||| |||| |||||||||||||||||||| | | ||||||| | ||||||||||||||||||| |
|
|
| T |
46473982 |
cgtcgtttcactatgtacttttttcttccaaatgcaaaagatgggcttccaagtttggttgaaaaggtggcttctgaatctg |
46474063 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 24 - 265
Target Start/End: Original strand, 46497803 - 46498044
Alignment:
| Q |
24 |
tttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttcaccttttgaatggcagctcggtca |
123 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||| |||||| ||||||| || | ||||||| | |||||||||||||||||||||||| | ||| || | |
|
|
| T |
46497803 |
tttgctaatgcactatactttaaaggagagtggaatgataattttgatgcttcggaaacgaatgtctatgattttcaccttttgaatggaaactcagtta |
46497902 |
T |
 |
| Q |
124 |
aggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttccgtataagaaaggcaaagataagct |
223 |
Q |
| |
|
||||| ||||||||| | || ||| ||||||||||| || || | || |||||||||||| | ||||| |||||| ||||| |||| |||| |
|
|
| T |
46497903 |
aggttgacttcatgactagtgatgagaagaagcagtttattagagatttcgatgattttaaagttcttggccttccttataagcaaggcgaagacaagcg |
46498002 |
T |
 |
| Q |
224 |
tccattctctatgtacattttccttccaaatgcaaaagatgg |
265 |
Q |
| |
|
|| ||| | |||||| |||| |||||||||||||||||||| |
|
|
| T |
46498003 |
tcaatttacgatgtacttttttcttccaaatgcaaaagatgg |
46498044 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 46531754 - 46532045
Alignment:
| Q |
1 |
ttgatagcttaacccgcctcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttca |
100 |
Q |
| |
|
||||||||||||| | ||||| ||||||||||||||||||||||| ||||||||| | | ||||||| || ||||| |||||| |||||||||| |
|
|
| T |
46531754 |
ttgatagcttaactggactcatttttgctaatgcactctactttaatggagcatggcatcaaccatttgatgcttcaaaaacaaaagaccatgattttca |
46531853 |
T |
 |
| Q |
101 |
ccttttgaatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttccg |
200 |
Q |
| |
|
|||| | ||||||||| | |||||||||||||| ||| || ||| ||| ||||||||| || |||| | | | ||||| | ||||||||||| |
|
|
| T |
46531854 |
ccttctcggtggcagctcaattaaggttcccttcat---gactagcaagaagaagcagtttataaatgcttttgatggttttaagatccttcgtcttcct |
46531950 |
T |
 |
| Q |
201 |
tataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggtggcttc |
295 |
Q |
| |
|
|||||| ||||||| |||| | || ||||||||||||| |||| ||||| ||||| ||||||| |||| |||||| || | || |||||||| |
|
|
| T |
46531951 |
tataagcaaggcaacgatattcgtcaattctctatgtacttttttcttcccgatgcacaagatggattgttagctttgattgagaaagtggcttc |
46532045 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 303
Target Start/End: Complemental strand, 47414376 - 47414184
Alignment:
| Q |
108 |
aatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttccgtataaga |
207 |
Q |
| |
|
||||| ||||| |||||||||||||||||||| | || |||| |||||||||| ||||| | | || |||||||||||| | ||||| ||||| | |
|
|
| T |
47414376 |
aatggaagctcagtcaaggttcccttcatgaccaatgga---gagaagcagtttattggagcttttgatgattttaaagttctttgccttccttataata |
47414280 |
T |
 |
| Q |
208 |
aaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggtggcttctgaatctg |
303 |
Q |
| |
|
|||| |||||| || |||||||||||||||||| |||||||| ||| |||||| |||| ||||||||| | ||||||||||||||||||| |
|
|
| T |
47414279 |
aaggagaagatacgcggaaattctctatgtacatttttcttccaaacacaagagatggactgtcagctttggttgagaaggtggcttctgaatctg |
47414184 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 302
Target Start/End: Complemental strand, 45883814 - 45883727
Alignment:
| Q |
215 |
agataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggtggcttctgaatct |
302 |
Q |
| |
|
|||||||| || ||||||||||||| |||| |||||||||||||||||||| |||| |||||||| | |||||||||||||||||| |
|
|
| T |
45883814 |
agataagcgtcgattctctatgtacttttttcttccaaatgcaaaagatggactgtcagctttggtcgagaaggtggcttctgaatct |
45883727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 46544292 - 46544430
Alignment:
| Q |
1 |
ttgatagcttaacccgcctcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttca |
100 |
Q |
| |
|
|||||||||||||| |||||||||||| || ||||| ||||| |||||||||||| || |||||||| || ||||| ||||||||||||||| | |
|
|
| T |
46544292 |
ttgatagcttaaccaacctcatctttgcaaacgcactatacttcaaaggagcatggtcggaggagtttgatacttcaaaaacaaaagactatgattttaa |
46544391 |
T |
 |
| Q |
101 |
ccttttgaatggcagctcggtcaaggttcccttcatgac |
139 |
Q |
| |
|
|||| | ||||||||| ||||||||||| |||||||| |
|
|
| T |
46544392 |
ccttctcaatggcagccaagtcaaggttcctttcatgac |
46544430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 265
Target Start/End: Original strand, 45902797 - 45903050
Alignment:
| Q |
9 |
ttaacccgcctcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttcaccttttga |
108 |
Q |
| |
|
|||||| | |||||||||||||| ||| | || |||||||||||||||| |||||||| ||| || || || || ||||| ||||| ||||| | | |
|
|
| T |
45902797 |
ttaaccagactcatctttgctaacgcattgtattttaaaggagcatggaaaaataagtttcatgcttcgaggacacaaaactataatttttaccttctaa |
45902896 |
T |
 |
| Q |
109 |
atggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttccgtataagaa |
208 |
Q |
| |
|
|||| ||||| ||||||||||||||||| |||||| || ||| ||||||||| | || | | || ||||| ||||||||||| ||| || | |
|
|
| T |
45902897 |
atggtagctcagtcaaggttcccttcat---gaccagcgagaagaggcagtttatccgcgttttcgatggtttcaaagtacttcgtcttccttatgagca |
45902993 |
T |
 |
| Q |
209 |
aggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatgg |
265 |
Q |
| |
|
||| ||||||||| || |||||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
45902994 |
aggagaagataagcgtcaattctctatgtatatttttcttccaaaagcaaaagatgg |
45903050 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 46236909 - 46236791
Alignment:
| Q |
182 |
taaagttcttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggtt |
281 |
Q |
| |
|
|||||||||| |||||| ||||| ||||||||||| || || |||||||||||| ||||| |||||| ||||||||||||| ||||| | |||||| |
|
|
| T |
46236909 |
taaagttctttatcttccttataatcaaggcaaagatgagtgtcaattctctatgtatatttttcttccagatgcaaaagatgggttgtcaaccttggtt |
46236810 |
T |
 |
| Q |
282 |
aataaggtggcttctgaat |
300 |
Q |
| |
|
| ||| |||||||||||| |
|
|
| T |
46236809 |
gagaagctggcttctgaat |
46236791 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 46549260 - 46549142
Alignment:
| Q |
18 |
ctcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttcaccttttgaatggcagct |
117 |
Q |
| |
|
||||||||||| |||||| | ||||| |||||||||||| ||| |||||| || | || | | | ||| ||||||||||||||| | |||||||||| |
|
|
| T |
46549260 |
ctcatctttgcaaatgcattatacttcaaaggagcatgggatgagaagtttaatactatggacatggaaggatatgattttcaccttctcaatggcagct |
46549161 |
T |
 |
| Q |
118 |
cggtcaaggttcccttcat |
136 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
46549160 |
cggtcaaggttcccttcat |
46549142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 51942965 - 51943039
Alignment:
| Q |
1 |
ttgatagcttaacccgcctcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttt |
75 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| | ||||||| ||||||||||| ||| ||||||||||||| |
|
|
| T |
51942965 |
ttgatagcttaactagcctcatctttgctaatgcgttgtactttagaggagcatggaatgagaagtttgatgttt |
51943039 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 46538897 - 46538958
Alignment:
| Q |
78 |
aaaacgaaagactatgattttcaccttttgaatggcagctcggtcaaggttcccttcatgac |
139 |
Q |
| |
|
||||| ||||||||||||||| ||||| | ||||||||||| |||||||||||||||||||| |
|
|
| T |
46538897 |
aaaacaaaagactatgattttaaccttcttaatggcagctcagtcaaggttcccttcatgac |
46538958 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 46526707 - 46526577
Alignment:
| Q |
9 |
ttaacccgcctcatctttgctaatgcactctacttt-aaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttcaccttttg |
107 |
Q |
| |
|
|||||| | ||||||||||| || ||||| || ||| ||||||||||||| | |||||| || || || ||| ||| |||||||||||||||||| |
|
|
| T |
46526707 |
ttaaccagactcatctttgcaaacgcactgtatttttaaaggagcatggaaaaagaagtttcctgcttcgagaacaaaaaactatgattttcaccttta- |
46526609 |
T |
 |
| Q |
108 |
aatggcagctcggtcaaggttcccttcatgac |
139 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |
|
|
| T |
46526608 |
aatggcagctcagtcaaggttcccttcatgac |
46526577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 46526536 - 46526454
Alignment:
| Q |
183 |
aaagttcttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatgg |
265 |
Q |
| |
|
||||| || |||||||| |||||| |||| ||||||||| || |||||||||||||||||| ||||||| |||| |||||| |
|
|
| T |
46526536 |
aaagtactccgtcttccttataagcaaggagaagataagcgtcaattctctatgtacatttttcttccaagagcaagagatgg |
46526454 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 46554477 - 46554343
Alignment:
| Q |
1 |
ttgatagcttaacccgcctcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttca |
100 |
Q |
| |
|
||||||| |||||| | ||||| |||||||||||||| || |||||||| |||||| | | |||||| | || |||| ||||||||||||||||| |
|
|
| T |
46554477 |
ttgatagtttaaccagactcatttttgctaatgcactatattttaaaggtgcatggcatcaaccgtttgacgcttcagaaacaaaagactatgattttca |
46554378 |
T |
 |
| Q |
101 |
ccttttgaatggcagctcggtcaaggttcccttca |
135 |
Q |
| |
|
|||| | |||| ||||| ||||||||||||||| |
|
|
| T |
46554377 |
ccttcttgatggtagctcattcaaggttcccttca |
46554343 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 46237070 - 46236949
Alignment:
| Q |
18 |
ctcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttcaccttttgaatggcagct |
117 |
Q |
| |
|
||||| ||||| |||||| | |||||||||||| ||||| ||| ||||||||| || | |||||||||| ||| | | ||||||| ||||| |||| |
|
|
| T |
46237070 |
ctcatatttgcaaatgcaatgtactttaaaggaatatggaatgagaagtttgatacttcggtaacgaaagacagtgactgttaccttttaaatggtagct |
46236971 |
T |
 |
| Q |
118 |
cggtcaaggttcccttcatgac |
139 |
Q |
| |
|
| ||||| |||||||||||||| |
|
|
| T |
46236970 |
ccgtcaaagttcccttcatgac |
46236949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 46549098 - 46549016
Alignment:
| Q |
183 |
aaagttcttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatgg |
265 |
Q |
| |
|
||||||||| |||||| ||||| |||| |||||||| | | ||||||||||||| |||| ||||||||| |||||||||| |
|
|
| T |
46549098 |
aaagttctttatcttccttataaataaggaaaagataaacgacaattctctatgtacttttttcttccaaatacaaaagatgg |
46549016 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 47397419 - 47397337
Alignment:
| Q |
183 |
aaagttcttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatgg |
265 |
Q |
| |
|
||||| ||||||||| | |||| | |||| ||||||||| | ||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
47397419 |
aaagtacttcgtctttcttataggcaaggtgaagataagcgccatttctccatgtacatttttcttccaaatgcaaaagatgg |
47397337 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 46554250 - 46554178
Alignment:
| Q |
228 |
ttctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggtggcttctgaat |
300 |
Q |
| |
|
|||||||||||| |||| ||||| ||||||||||||| ||||| |||||| || | || |||||||| |||| |
|
|
| T |
46554250 |
ttctctatgtactttttacttcccgatgcaaaagatgggttgtcagctttgattgagaaagtggcttcggaat |
46554178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 80; Significance: 2e-37; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 88 - 298
Target Start/End: Original strand, 35162361 - 35162567
Alignment:
| Q |
88 |
actatgattttcaccttttgaatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagt |
187 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| |||||||||||||||||||| |||| | ||| |||||||||| ||||| | | | |||||||| |
|
|
| T |
35162361 |
actatgattttcaccttctgaatggaagctcagtcaaggttcccttcatgactacca--accttgat-cagtttattagagcttttgatggttttaaagt |
35162457 |
T |
 |
| Q |
188 |
tcttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataag |
287 |
Q |
| |
|
|||||||||||| |||||| |||| |||||| ||| ||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| | ||| |
|
|
| T |
35162458 |
tcttcgtcttccttataagcaaggaaaagatgagcggaaattctctatgtacattttc-ttccaaatgcaaaagatggcctgtcagctttggttgagaag |
35162556 |
T |
 |
| Q |
288 |
gtggcttctga |
298 |
Q |
| |
|
||||||||||| |
|
|
| T |
35162557 |
gtggcttctga |
35162567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 90 - 300
Target Start/End: Original strand, 35155342 - 35155549
Alignment:
| Q |
90 |
tatgattttcaccttttgaatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttc |
189 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||||||||||||||||| | ||| || || ||||||| ||||| | | | |||||||||| |
|
|
| T |
35155342 |
tatgattttcaccttctgaatggcagctcagtcaaggttcccttcatgaccagcagccttgat---caatttattagagcttttgatggttttaaagttc |
35155438 |
T |
 |
| Q |
190 |
ttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggt |
289 |
Q |
| |
|
||||||||||||||||| |||| |||||| ||| |||||||||||||||||| |||||||||||||||||||| | || ||||||||| | ||||| |
|
|
| T |
35155439 |
ttcgtcttccgtataagcaaggaaaagatgagcggaaattctctatgtacatttttcttccaaatgcaaaagatggactatcagctttggttgagaaggt |
35155538 |
T |
 |
| Q |
290 |
ggcttctgaat |
300 |
Q |
| |
|
||||||||||| |
|
|
| T |
35155539 |
ggcttctgaat |
35155549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 15555852 - 15555976
Alignment:
| Q |
6 |
agcttaacccgcctcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttcaccttt |
105 |
Q |
| |
|
||||||||| | ||||||||||| |||||||| |||||||||||| |||| | | |||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
15555852 |
agcttaaccagactcatctttgcaaatgcactgtactttaaaggactatggtatcagaagtttgatgcttccaaaacgaaagactatgattttcaccttc |
15555951 |
T |
 |
| Q |
106 |
tgaatggcagctcggtcaaggttcc |
130 |
Q |
| |
|
| ||||| ||||| |||||||||| |
|
|
| T |
15555952 |
tcaatggtagctcactcaaggttcc |
15555976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 303
Target Start/End: Original strand, 15556070 - 15556146
Alignment:
| Q |
227 |
attctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggtggcttctgaatctg |
303 |
Q |
| |
|
||||||||| ||| || | |||||| ||||||||||||| | |||||||||||| | ||||||||||| ||||||| |
|
|
| T |
15556070 |
attctctatctactttattcttccagatgcaaaagatggactctcggctttggttgaaaaggtggcttcagaatctg |
15556146 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 35155260 - 35155309
Alignment:
| Q |
8 |
cttaacccgcctcatctttgctaatgcactctactttaaaggagcatgga |
57 |
Q |
| |
|
||||||| | |||||||||||||||||||| || ||||||||||| |||| |
|
|
| T |
35155260 |
cttaaccagactcatctttgctaatgcactgtattttaaaggagcttgga |
35155309 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 265
Target Start/End: Complemental strand, 20169304 - 20169061
Alignment:
| Q |
19 |
tcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttcaccttttgaatggcagctc |
118 |
Q |
| |
|
||||||||||||||||| | ||||||| ||||||||||| ||| ||||| || ||| ||||| || ||| ||||||||| ||||||||||| | ||| |
|
|
| T |
20169304 |
tcatctttgctaatgcattgtactttataggagcatggaatgagaagttcgacctttccaaaacagaaaactgtgattttcatcttttgaatggaaactc |
20169205 |
T |
 |
| Q |
119 |
ggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttccgtataagaaaggcaaagat |
218 |
Q |
| |
|
||||||||||| |||||| | || || ||||||| |||||| |||||||| ||| | |||||||||||||||||| ||||| ||||| ||||| |
|
|
| T |
20169204 |
agtcaaggttcctttcatggtaagca---agaagatgcaatttattgaagcttatgacggttctaaagttcttcgtcttccttataaaaaaggtcaagat |
20169108 |
T |
 |
| Q |
219 |
aagcttccattctctatgtacattttccttccaaatgcaaaagatgg |
265 |
Q |
| |
|
| || || |||||||||||| ||||| | ||||| ||||||||||| |
|
|
| T |
20169107 |
acgcgtcaattctctatgtatatttttttgccaaacgcaaaagatgg |
20169061 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 19 - 265
Target Start/End: Original strand, 20358982 - 20359223
Alignment:
| Q |
19 |
tcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttcaccttttgaatggcagctc |
118 |
Q |
| |
|
||||||||||||||||| | ||||||| ||||||||||| ||| ||||| || ||| ||||| || || ||||||||| ||||||||||| | ||| |
|
|
| T |
20358982 |
tcatctttgctaatgcattgtactttataggagcatggaatgagaagttcgacctttccaaaacagaa--ctgtgattttcatcttttgaatggaaactc |
20359079 |
T |
 |
| Q |
119 |
ggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttccgtataagaaaggcaaagat |
218 |
Q |
| |
|
||||||||||| |||||| | || || |||||||||||||| |||||||| ||| | |||||||||||||||||| ||||| ||||| ||||| |
|
|
| T |
20359080 |
agtcaaggttcctttcatggtaagca---agaagatgcagtttattgaagcttatgacggttctaaagttcttcgtcttccttataaaaaaggtcaagat |
20359176 |
T |
 |
| Q |
219 |
aagcttccattctctatgtacattttccttccaaatgcaaaagatgg |
265 |
Q |
| |
|
| || || |||||||||||| ||||| | ||||| ||||||||||| |
|
|
| T |
20359177 |
acgcgtcaattctctatgtatatttttttgccaaacgcaaaagatgg |
20359223 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 265
Target Start/End: Original strand, 20144470 - 20144713
Alignment:
| Q |
19 |
tcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttcaccttttgaatggcagctc |
118 |
Q |
| |
|
||||||||||||||||| | ||||||| ||||||||||| ||| ||||| || ||| ||||| || || ||||||||| ||||||||||| | ||| |
|
|
| T |
20144470 |
tcatctttgctaatgcattgtactttataggagcatggaatgagaagttcgacctttcaaaaacagaaaacagtgattttcatcttttgaatggaaactc |
20144569 |
T |
 |
| Q |
119 |
ggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttccgtataagaaaggcaaagat |
218 |
Q |
| |
|
||||||||||| |||||| | || || |||||||||||||| |||||||| ||| | |||||||||||||||||| ||||| ||||| ||||| |
|
|
| T |
20144570 |
agtcaaggttcctttcatggtaagca---agaagatgcagtttattgaagcttatgacggttctaaagttcttcgtcttccttataaaaaaggtcaagat |
20144666 |
T |
 |
| Q |
219 |
aagcttccattctctatgtacattttccttccaaatgcaaaagatgg |
265 |
Q |
| |
|
| || || |||||||||||| ||||| | || || ||||||||||| |
|
|
| T |
20144667 |
acgcgtcaattctctatgtatatttttttgcctaacgcaaaagatgg |
20144713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 130
Target Start/End: Complemental strand, 20141841 - 20141802
Alignment:
| Q |
91 |
atgattttcaccttttgaatggcagctcggtcaaggttcc |
130 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
20141841 |
atgattttcaccttttgaatggaagctccgtcaaggttcc |
20141802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 300
Target Start/End: Complemental strand, 9675979 - 9675690
Alignment:
| Q |
8 |
cttaacccgcctcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttcaccttttg |
107 |
Q |
| |
|
||||||| | |||||||||||||||||||| || |||||||||| |||| |||| | ||| || || || || || ||||||||||||||||| || |
|
|
| T |
9675979 |
cttaaccagactcatctttgctaatgcactatattttaaaggagaatgggttgatcaattttttgattataataccgaaaactatgattttcaccttctg |
9675880 |
T |
 |
| Q |
108 |
aatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttccgtataaga |
207 |
Q |
| |
|
||||||||||| ||||| |||||||| |||| |||| | ||| |||||||||| ||||| | | | |||||||| ||| |||| || ||| || |
|
|
| T |
9675879 |
aatggcagctcagtcaaagttccctttatgagcacca--accttgat-cagtttattagagcttttgatggttttaaagtgctttgtctcccttatgagc |
9675783 |
T |
 |
| Q |
208 |
aaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggtggcttctgaat |
300 |
Q |
| |
|
|||| |||||||| | |||||||||||||||||| |||||||||||||||| ||| | |||||| ||||| | |||||||||||||||| |
|
|
| T |
9675782 |
aaggtggagataagcgacaattctctatgtacatttttcttccaaatgcaaaaggtggactatcggctatggttgaaaaggtggcttctgaat |
9675690 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 9693008 - 9692748
Alignment:
| Q |
1 |
ttgatagcttaacccgcctcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttca |
100 |
Q |
| |
|
|||| ||||||||| | |||||||||||||||||| | || |||||||||||||||||| || ||| || || || || | || ||||||||||| |
|
|
| T |
9693008 |
ttgacagcttaaccagactcatctttgctaatgcattgtattttaaaggagcatggagtaatccttttcctgcttggaggacaagcgaatatgattttca |
9692909 |
T |
 |
| Q |
101 |
ccttttgaatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttccg |
200 |
Q |
| |
|
|||| |||||||||||| ||||||||||| || |||| | || | ||| |||||||||| ||||| | | | |||||||||||||||||||| |
|
|
| T |
9692908 |
ccttccgaatggcagctcagtcaaggttccttttatgagcagca--accttgat-cagtttattagagcttttgatggttttaaagttcttcgtcttcct |
9692812 |
T |
 |
| Q |
201 |
tataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatg |
264 |
Q |
| |
|
||||| |||| ||| |||||| | |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
9692811 |
tataattaaggaaaaaataagcgacaattctctatgtacatttttcttccaaatgcaaaagatg |
9692748 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 302
Target Start/End: Complemental strand, 21464304 - 21464182
Alignment:
| Q |
180 |
tttaaagttcttcgtcttccgtataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttgg |
279 |
Q |
| |
|
|||||||| ||||||||||| |||| | |||| |||| || | || |||||| || ||| |||| ||||| ||||||||||||| |||| |||||| |
|
|
| T |
21464304 |
tttaaagtccttcgtcttccttatacgcaaggtgaagacaaacatcgattctcaatttacttttttcttcctgatgcaaaagatggattgttagctttga |
21464205 |
T |
 |
| Q |
280 |
ttaataaggtggcttctgaatct |
302 |
Q |
| |
|
|||| ||||| ||||| |||||| |
|
|
| T |
21464204 |
ttaagaaggttgcttccgaatct |
21464182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 17744948 - 17745081
Alignment:
| Q |
6 |
agcttaacccgcctcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttcaccttt |
105 |
Q |
| |
|
||||||||| |||| ||||||||||||||||| ||||| ||||||| ||||| | ||||||||| || |||||||| |||||||||||| ||||| |
|
|
| T |
17744948 |
agcttaaccagcctaatctttgctaatgcactatacttcaaaggagtatggaaacaaaagtttgatacttcaaaaacgaaggactatgattttgaccttc |
17745047 |
T |
 |
| Q |
106 |
tgaatggcagctcggtcaaggttcccttcatgac |
139 |
Q |
| |
|
| || |||| || || ||||||||||| ||||| |
|
|
| T |
17745048 |
ttaacggcaagtcagtaaaggttccctttatgac |
17745081 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 16721990 - 16722035
Alignment:
| Q |
6 |
agcttaacccgcctcatctttgctaatgcactctactttaaaggag |
51 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || || ||||||| |
|
|
| T |
16721990 |
agcttaacccgcctcatctttgctaatgcactatatttcaaaggag |
16722035 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 17699004 - 17699049
Alignment:
| Q |
6 |
agcttaacccgcctcatctttgctaatgcactctactttaaaggag |
51 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || || ||||||| |
|
|
| T |
17699004 |
agcttaacccgcctcatctttgctaatgcactatatttcaaaggag |
17699049 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 17735762 - 17736061
Alignment:
| Q |
1 |
ttgatagcttaacccgcctcatctttgctaatgcactctactttaaaggagcatggagtgataagtttgatgttttgaaaacgaaagactatgattttca |
100 |
Q |
| |
|
|||| ||||||||| ||||||||||||| |||||||| ||||| ||||||| |||| ||||||| || |||||||| |||||||||||| | |
|
|
| T |
17735762 |
ttgacagcttaaccagcctcatctttgcgaatgcactatacttcaaaggagtttggaaacgaccgtttgatacttcaaaaacgaaggactatgattttga |
17735861 |
T |
 |
| Q |
101 |
ccttttgaatggcagctcggtcaaggttcccttcatgacgaccagaaaggagatgcagtttattaaagcttataacgactttaaagttcttcgtcttccg |
200 |
Q |
| |
|
|||| | ||||||| || || ||||||||||| || |||||| ||| | | |||||||| | ||| | | | |||||||| ||| ||||||| |
|
|
| T |
17735862 |
ccttctcaatggcaagtcagtaaaggttccctttat---gaccagcaagaataatcagtttatcagttcttttgatggttttaaagtccttggtcttcct |
17735958 |
T |
 |
| Q |
201 |
tataagaaaggcaaagataagcttccattctctatgtacattttccttccaaatgcaaaagatggcttgtcggctttggttaataaggtggcttctgaat |
300 |
Q |
| |
|
|| || ||||||| ||||||| | |||||||||| ||| |||| ||||| | | ||||||||| ||||| |||||| || |||| || |||||||| | |
|
|
| T |
17735959 |
tacaaacaaggcaatgataagcgtgcattctctatttacttttttcttcctgacgaaaaagatgggttgtcagctttgattgataaagtagcttctgatt |
17736058 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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