View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2243_low_2 (Length: 307)
Name: NF2243_low_2
Description: NF2243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2243_low_2 |
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Alignment Details
Target: chr4 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 162 - 296
Target Start/End: Complemental strand, 35725949 - 35725815
Alignment:
| Q |
162 |
aattagtagttaaattaatagtgacaacaaaatattttgaggaacaaaacaagcagaaaggttacacgtcgaaatttgatgttttctcttgttatctagt |
261 |
Q |
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| T |
35725949 |
aattagtagttaaattaatagtgacaacaaaatattttgaggaacaaaacaagcagaaaggttacacgtcgaaatttgatgttttctcttgttatctagt |
35725850 |
T |
|
| Q |
262 |
cattattgatgtgtcatgtttgtgatgttgatgat |
296 |
Q |
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|||| |||||||||||||||||||||||||||||| |
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| T |
35725849 |
cattcttgatgtgtcatgtttgtgatgttgatgat |
35725815 |
T |
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