View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2244_low_1 (Length: 796)
Name: NF2244_low_1
Description: NF2244
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2244_low_1 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 648; Significance: 0; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 648; E-Value: 0
Query Start/End: Original strand, 1 - 776
Target Start/End: Complemental strand, 14659444 - 14658675
Alignment:
| Q |
1 |
tccatgagaaagaagttcctctatttaagcttgggatcaatttcaactttaaatccatcaccataataattttttgattgagttatatattgctacggct |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
14659444 |
tccatgagaaagaaattcctctatttaagcttgggatcaatttcaactttaaatccatcaccataataattttttgatttggttatatattgctacggct |
14659345 |
T |
|
| Q |
101 |
aatcttgaacctacgccatttcaatggaaccagagggaattcttgaataatattgatataaaaattgccgtttcactaatttggaatttgaaataataac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
14659344 |
aatcttgaacctacgccatttcaatggaactagagggagttcttgaataatattgatataaaaattgccgtttcattaatttgaaatttgaaataataac |
14659245 |
T |
|
| Q |
201 |
aagcaaatgaaaaaatactaaagagtgaaaggacagggaattgaaggagtcaaatgggtaattgaggaagtagagagattggattcggttacgagtgaga |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
14659244 |
aagcaaatgaaaaaatactaaagagtgaaaggacggggaattgaaggagtggaatgggtaattgaggaagtagagagattggatccggtt------gaga |
14659151 |
T |
|
| Q |
301 |
gagagaacaatgaaagagatagagttggtgatggctaagatttagtgtggatagagtatgataagatttcatggatagtctaatctaaacattnnnnnnn |
400 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14659150 |
gagagaacaatgaaagagatagagttgatgatggctaagatttagtgtggatagagtatgataagatttcatggatagtctaatctaaacattaaaaaaa |
14659051 |
T |
|
| Q |
401 |
ttggtccatcatggaccaattcttcaattggtccaagctaaatggcacgtaataagtcttacttcttaagtgaaagtcataaatttctacttcttatgtg |
500 |
Q |
| |
|
||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
14659050 |
ttgatccatcatggaccaattcttcaattgatccaagctaaatggcacctaataagtcatacttcttaagggaaagtcataaatttctacttcttatgtg |
14658951 |
T |
|
| Q |
501 |
aaagaatccaatatatgtctcatcaattctaataaaatttgcatggcagctccttaataacaatatttcgcatttaagaatcctagacttacaagtctta |
600 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14658950 |
aaagaatccaatatatgactcatcaattctaataaaatttgcatggcagctccttaataataatatttcgcatttaagaatcctagacttacaagtctta |
14658851 |
T |
|
| Q |
601 |
cttcttatgtgaaactctccaataatgtgacccaagagtaaccagcaacaacgtaaatgtatttatactgaaatcaattttgtagaatcaagatcatgca |
700 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14658850 |
cttcttatgtgaaactctccaataatgtgacccaagagtaaccagcaacaatgtaaatgtatttatactgaaatcaattttgtagaatcaagatcatgca |
14658751 |
T |
|
| Q |
701 |
aaatcaaatttataagcatacataatgatttttagctaaaaagaatatcaattaggtcaaaagtaacttggtacta |
776 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14658750 |
aaatcaaatttataagcatacataatgatttttagctaaaaagaatatcaattaggtcaaaagtaacttagtacta |
14658675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 297 - 444
Target Start/End: Original strand, 13715381 - 13715528
Alignment:
| Q |
297 |
gagagagagaacaatgaaagagatagagttggtgatggctaagatttagtgtggatagagtatgataagatttcatggatagtctaatctaaacattnnn |
396 |
Q |
| |
|
|||||| ||| ||||||| ||||||||||||||||||||| |||| |||||| |||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
13715381 |
gagagaaagagcaatgaaggagatagagttggtgatggcttagatagggtgtgggtagagtatgataagatttggtggattgtctaatctaaacattaaa |
13715480 |
T |
|
| Q |
397 |
nnnnttggtccatcatggaccaattcttcaattggtccaagctaaatg |
444 |
Q |
| |
|
||||| |||||||||||| |||||| | | |||||||||||||| |
|
|
| T |
13715481 |
aaaattggtgcatcatggaccatttcttctactcgtccaagctaaatg |
13715528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 297 - 444
Target Start/End: Complemental strand, 4848632 - 4848485
Alignment:
| Q |
297 |
gagagagagaacaatgaaagagatagagttggtgatggctaagatttagtgtggatagagtatgataagatttcatggatagtctaatctaaacattnnn |
396 |
Q |
| |
|
|||||| ||| ||||||| ||||||||||||||||||||| |||| ||| ||| |||||||||||||||||| |||||| | |||||||||||||| |
|
|
| T |
4848632 |
gagagaaagagcaatgaaggagatagagttggtgatggcttagatagagtctgggtagagtatgataagatttgatggattgcctaatctaaacattaaa |
4848533 |
T |
|
| Q |
397 |
nnnnttggtccatcatggaccaattcttcaattggtccaagctaaatg |
444 |
Q |
| |
|
||| |||||||| ||||||||||||| | |||||| ||||||| |
|
|
| T |
4848532 |
aaaattgatccatcatacaccaattcttcaactagtccaaactaaatg |
4848485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 38226096 - 38226167
Alignment:
| Q |
116 |
ccatttcaatggaaccagagggaattcttgaataatattgatataaaaattgccgtttcactaatttggaat |
187 |
Q |
| |
|
||||||||||||||| ||||| | || ||||||| ||||||||||||||| | |||||||||||||||||| |
|
|
| T |
38226096 |
ccatttcaatggaactagaggaagttgttgaatagtattgatataaaaatggaagtttcactaatttggaat |
38226167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 328; Significance: 0; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 4 - 393
Target Start/End: Complemental strand, 44398662 - 44398274
Alignment:
| Q |
4 |
atgagaaagaagttcctctatttaagcttgggatcaatttcaactttaaatccatcaccataataattttttgattgagttatatattgctacggctaat |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||| |
|
|
| T |
44398662 |
atgagaaagaagttcctctatttaagcttgggatcaatttcaactttaaatccatcaccataataattttctgatttagttatatattgctacagctaat |
44398563 |
T |
|
| Q |
104 |
cttgaaccta-cgccatttcaatggaaccagagggaattcttgaataatattgatataaaaattgccgtttcactaatttggaatttgaaataataacaa |
202 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44398562 |
cttgaacctaacgccatttcaatggaatcagagggagttcttgaataatattgatataaaaattgccgtttcactaatttggaatttgaaataataacaa |
44398463 |
T |
|
| Q |
203 |
gcaaatgaaaaaatactaaagagtgaaaggacagggaattgaaggagtcaaatgggtaattgaggaagtagagagattggattcggttacgagtgagaga |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
44398462 |
gcaaatgaaaaaatactaaagagtgaaaggacagggaattgaaggagtggaatgggtaattgaggaagtagagagattggatccggttactagtgaga-- |
44398365 |
T |
|
| Q |
303 |
gagaacaatgaaagagatagagttggtgatggctaagatttagtgtggatagagtatgataagatttcatggatagtctaatctaaacatt |
393 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
44398364 |
gagaacaatgaaagagatagagttggtaatggctaagatttagtgtggatagagtatgataagatttgatggatagtctaatctaaacatt |
44398274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 1 - 444
Target Start/End: Complemental strand, 6127506 - 6127073
Alignment:
| Q |
1 |
tccatgagaaagaagttcctctatttaagcttgggatcaatttcaactttaaatccatcaccataataattttttgattgagttatatattgctacggct |
100 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
6127506 |
tccatgagaaagaagttcctttatttaagcttgggatcaatttcaactttaaatccatcaccataataattttttgatttagttatatattgctacggct |
6127407 |
T |
|
| Q |
101 |
aatcttgaacctacgccatttcaatggaaccagagggaattcttgaataatattgatataaaaattgccgtttcactaatttggaatttgaaataataac |
200 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
6127406 |
aatcttgaacctacatcatttcaatggaaccagagggagttcttgaataatattgatataaaaattgccgtttcattaatttggaatttgaaataataac |
6127307 |
T |
|
| Q |
201 |
aagcaaatgaaaaaatactaaagagtgaaaggacagggaattgaaggagtcaaatgggtaattgaggaagtagagagattggattcggttacgagtgaga |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| ||| |||||||||| ||| | || || ||||||| |
|
|
| T |
6127306 |
aagcaaatgaaaaaatactaaagagtgaaacgacggggaattgaaggagtggaat----------agaattagagagatttgatcccgtaactagtgaga |
6127217 |
T |
|
| Q |
301 |
gagagaacaatgaaagagatagagttggtgatggctaagatttagtgtggatagagtatgataagatttcatggatagtctaatctaaacattnnnnnnn |
400 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
6127216 |
gagagaacaatgaaagagatagagttgatgatggctaagatttagtgtggatagaatatgataagatttgatggatagtctaatctaaacattaaaaaaa |
6127117 |
T |
|
| Q |
401 |
ttggtccatcatggaccaattcttcaattggtccaagctaaatg |
444 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
6127116 |
ttggtccatcatggaccaattcttcaattgatctaagctaaatg |
6127073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 1 - 444
Target Start/End: Complemental strand, 43811264 - 43810833
Alignment:
| Q |
1 |
tccatgagaaagaagttcctctatttaagcttgggatcaatttcaactttaaatccatcaccataataattttttgattgagttatatattgctacggct |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
43811264 |
tccatgagaaagaagttcctctatttaagtttgggatcaatttcaactttaaatccatcaccataataattttttgatttagttatatattgctacggct |
43811165 |
T |
|
| Q |
101 |
aatcttgaaccta-cgccatttcaatggaaccagagggaattcttgaataatattgatataaaaattgccgtttcactaatttggaatttgaaataataa |
199 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
43811164 |
aatcttgaacctaacgccatttcaatggaac---------ttcttgaataatattgatataaaaactgccgtttcactaatttggaatttgaaataataa |
43811074 |
T |
|
| Q |
200 |
caagcaaatgaaaaaatactaaagagtgaaaggacagggaattgaaggagtcaaatgggtaattgaggaagtagagagattggattcggttacgagtgag |
299 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||| || ||||||| ||| |
|
|
| T |
43811073 |
caagcaaatgaaaaaatactaaagagtgaaaggatggagaattgaaggagtggaatgggtaattgaggaagtagagagattgaatccggttactagt--- |
43810977 |
T |
|
| Q |
300 |
agagagaacaatgaaagagatagagttggtgatggctaagatttagtgtggatagagtatgataagatttcatggatagtctaatctaaacattnnnnnn |
399 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||| |
|
|
| T |
43810976 |
-gagagaacaatgaaagagatagagttggtgatggctaagatttagtgtggatagagttcgataagatttgatggatagtctaatctaaatattaaaaaa |
43810878 |
T |
|
| Q |
400 |
nttggtccatcatggaccaattcttcaattggtccaagctaaatg |
444 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
43810877 |
attggtccatcataaaccaattattcaattggtccaagctaaatg |
43810833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 401 - 448
Target Start/End: Original strand, 49251450 - 49251497
Alignment:
| Q |
401 |
ttggtccatcatggaccaattcttcaattggtccaagctaaatggcac |
448 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
49251450 |
ttggtccatcatggaccaaaacttcaataggtccaagctaaatggcac |
49251497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 401 - 446
Target Start/End: Original strand, 24626015 - 24626060
Alignment:
| Q |
401 |
ttggtccatcatggaccaattcttcaattggtccaagctaaatggc |
446 |
Q |
| |
|
|||||||||||||||||||| | ||||| ||||||||||||||||| |
|
|
| T |
24626015 |
ttggtccatcatggaccaatacctcaatgggtccaagctaaatggc |
24626060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 444
Target Start/End: Original strand, 55863268 - 55863311
Alignment:
| Q |
401 |
ttggtccatcatggaccaattcttcaattggtccaagctaaatg |
444 |
Q |
| |
|
|||||||||||||||||||| ||||||| | ||||||||||||| |
|
|
| T |
55863268 |
ttggtccatcatggaccaatacttcaatagatccaagctaaatg |
55863311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 401 - 447
Target Start/End: Complemental strand, 38582194 - 38582148
Alignment:
| Q |
401 |
ttggtccatcatggaccaattcttcaattggtccaagctaaatggca |
447 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
38582194 |
ttggtccatcatggaccaatatctcaatgggtccaagctaaatggca |
38582148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 77; Significance: 3e-35; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 297 - 442
Target Start/End: Original strand, 4785003 - 4785148
Alignment:
| Q |
297 |
gagagagagaacaatgaaagagatagagttggtgatggctaagatttagtgtggatagagtatgataagatttcatggatagtctaatctaaacattnnn |
396 |
Q |
| |
|
|||||| ||| ||||||| ||||||||||||||||||||| |||| ||||||| |||||||||||||||||| ||||| |||||||||| ||||| |
|
|
| T |
4785003 |
gagagaaagagcaatgaaggagatagagttggtgatggcttagatagagtgtgggtagagtatgataagatttggtggattgtctaatctacacattaaa |
4785102 |
T |
|
| Q |
397 |
nnnnttggtccatcatggaccaattcttcaattggtccaagctaaa |
442 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
4785103 |
aaaattggtccatcatggaccaattcttcaactggtccaagctaaa |
4785148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 401 - 444
Target Start/End: Complemental strand, 30151882 - 30151839
Alignment:
| Q |
401 |
ttggtccatcatggaccaattcttcaattggtccaagctaaatg |
444 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
30151882 |
ttggtccatcatggaccaatacttcaatgggtccaagctaaatg |
30151839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 364
Target Start/End: Complemental strand, 22917177 - 22917110
Alignment:
| Q |
297 |
gagagagagaacaatgaaagagatagagttggtgatggctaagatttagtgtggatagagtatgataa |
364 |
Q |
| |
|
|||||| ||| ||| ||| ||||||||||||||||||||| |||| |||||| ||||||||||||| |
|
|
| T |
22917177 |
gagagaaagagcaaggaaggagatagagttggtgatggcttagatagggtgtgggtagagtatgataa |
22917110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 68; Significance: 6e-30; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 308 - 444
Target Start/End: Original strand, 39773715 - 39773851
Alignment:
| Q |
308 |
caatgaaagagatagagttggtgatggctaagatttagtgtggatagagtatgataagatttcatggatagtctaatctaaacattnnnnnnnttggtcc |
407 |
Q |
| |
|
||||||| ||||||||||||||||||||| |||| |||||| |||||||||||| ||||| ||||| |||||||||||||||| |||| || |
|
|
| T |
39773715 |
caatgaaggagatagagttggtgatggcttagatagggtgtgggtagagtatgatatgatttggtggattgtctaatctaaacattaaaaaaattggccc |
39773814 |
T |
|
| Q |
408 |
atcatggaccaattcttcaattggtccaagctaaatg |
444 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |
|
|
| T |
39773815 |
atcatggaccaattcttcaactggtccaagctaaatg |
39773851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 61; Significance: 9e-26; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 318 - 443
Target Start/End: Original strand, 45908165 - 45908290
Alignment:
| Q |
318 |
gatagagttggtgatggctaagatttagtgtggatagagtatgataagatttcatggatagtctaatctaaacattnnnnnnnttggtccatcatggacc |
417 |
Q |
| |
|
||||||||||||||||||| |||| |||||| |||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
45908165 |
gatagagttggtgatggcttagatagggtgtgggtagagtatgataagatttggtggattgtctaatctaaacattaaaaaaattggtccatcatggaca |
45908264 |
T |
|
| Q |
418 |
aattcttcaattggtccaagctaaat |
443 |
Q |
| |
|
|||| ||||| ||||||||||||||| |
|
|
| T |
45908265 |
aatttttcaactggtccaagctaaat |
45908290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 448
Target Start/End: Original strand, 44658291 - 44658338
Alignment:
| Q |
401 |
ttggtccatcatggaccaattcttcaattggtccaagctaaatggcac |
448 |
Q |
| |
|
||||||||| ||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
44658291 |
ttggtccattatggaccaaaacttcaataggtccaagctaaatggcac |
44658338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 444
Target Start/End: Original strand, 44827634 - 44827677
Alignment:
| Q |
401 |
ttggtccatcatggaccaattcttcaattggtccaagctaaatg |
444 |
Q |
| |
|
||||||||| |||||||||||||||||| |||||| |||||||| |
|
|
| T |
44827634 |
ttggtccattatggaccaattcttcaataggtccatgctaaatg |
44827677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 401 - 444
Target Start/End: Complemental strand, 7694670 - 7694627
Alignment:
| Q |
401 |
ttggtccatcatggaccaattcttcaattggtccaagctaaatg |
444 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
7694670 |
ttggtccatcatggaccaatacttcaatgggtccaagctaaatg |
7694627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 401 - 450
Target Start/End: Original strand, 38231772 - 38231821
Alignment:
| Q |
401 |
ttggtccatcatggaccaattcttcaattggtccaagctaaatggcacgt |
450 |
Q |
| |
|
|||||||||||||||||||| ||||||| | ||||||||||||| ||||| |
|
|
| T |
38231772 |
ttggtccatcatggaccaatacttcaatggttccaagctaaatgacacgt |
38231821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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