View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2244_low_13 (Length: 324)

Name: NF2244_low_13
Description: NF2244
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2244_low_13
NF2244_low_13
[»] chr1 (29 HSPs)
chr1 (85-309)||(49976118-49976342)
chr1 (13-82)||(6017445-6017514)
chr1 (13-80)||(45299323-45299390)
chr1 (13-79)||(26543874-26543940)
chr1 (13-80)||(8251145-8251212)
chr1 (13-80)||(10100509-10100576)
chr1 (13-74)||(10124120-10124181)
chr1 (13-80)||(52749286-52749353)
chr1 (13-55)||(1821624-1821666)
chr1 (13-78)||(29253486-29253551)
chr1 (13-80)||(5606387-5606454)
chr1 (13-80)||(7075326-7075393)
chr1 (13-80)||(31932174-31932241)
chr1 (13-80)||(41855717-41855784)
chr1 (13-80)||(44240524-44240591)
chr1 (13-55)||(44452225-44452267)
chr1 (13-60)||(10648197-10648244)
chr1 (13-80)||(41414208-41414275)
chr1 (13-79)||(5945771-5945837)
chr1 (13-55)||(48389096-48389138)
chr1 (19-55)||(52688559-52688595)
chr1 (13-80)||(8048744-8048811)
chr1 (13-80)||(28490165-28490232)
chr1 (13-76)||(31651897-31651960)
chr1 (13-80)||(50014557-50014624)
chr1 (13-51)||(2126686-2126724)
chr1 (13-55)||(33730190-33730232)
chr1 (13-51)||(40883445-40883483)
chr1 (13-55)||(44741373-44741415)
[»] chr6 (25 HSPs)
chr6 (13-80)||(17496314-17496381)
chr6 (13-80)||(2667321-2667388)
chr6 (13-80)||(24798542-24798609)
chr6 (13-80)||(2397775-2397842)
chr6 (13-80)||(29795456-29795523)
chr6 (13-78)||(2656666-2656731)
chr6 (13-77)||(28483046-28483110)
chr6 (13-80)||(30699266-30699333)
chr6 (13-80)||(32541473-32541540)
chr6 (13-57)||(24825193-24825237)
chr6 (13-80)||(9022845-9022912)
chr6 (13-80)||(29515022-29515089)
chr6 (13-58)||(6142503-6142548)
chr6 (13-57)||(6188652-6188696)
chr6 (13-55)||(13358539-13358581)
chr6 (13-58)||(2141595-2141640)
chr6 (13-80)||(16661598-16661665)
chr6 (13-51)||(4890122-4890160)
chr6 (13-55)||(16969408-16969450)
chr6 (13-55)||(35117310-35117352)
chr6 (19-51)||(10109413-10109445)
chr6 (20-80)||(24949540-24949600)
chr6 (13-80)||(995568-995635)
chr6 (13-80)||(31708898-31708965)
chr6 (13-78)||(32673755-32673820)
[»] chr2 (22 HSPs)
chr2 (13-82)||(12208992-12209061)
chr2 (13-80)||(7724602-7724669)
chr2 (13-80)||(8373439-8373506)
chr2 (13-80)||(31603407-31603474)
chr2 (13-80)||(40471741-40471808)
chr2 (13-79)||(16126073-16126139)
chr2 (13-79)||(16333486-16333552)
chr2 (13-58)||(38963822-38963867)
chr2 (13-80)||(10333569-10333636)
chr2 (13-80)||(16127771-16127838)
chr2 (13-55)||(8896301-8896343)
chr2 (13-80)||(5096253-5096320)
chr2 (13-80)||(41436837-41436904)
chr2 (13-80)||(41575567-41575634)
chr2 (13-67)||(22718534-22718588)
chr2 (13-74)||(11277562-11277623)
chr2 (13-77)||(2831715-2831779)
chr2 (13-56)||(44022297-44022340)
chr2 (13-55)||(18504502-18504544)
chr2 (13-67)||(37987927-37987981)
chr2 (13-55)||(43328792-43328834)
chr2 (13-54)||(6730094-6730135)
[»] scaffold0221 (1 HSPs)
scaffold0221 (13-80)||(5381-5448)
[»] scaffold0001 (1 HSPs)
scaffold0001 (13-80)||(183971-184038)
[»] chr7 (20 HSPs)
chr7 (13-80)||(30462213-30462280)
chr7 (13-80)||(16807138-16807205)
chr7 (15-78)||(25274011-25274074)
chr7 (13-80)||(38069056-38069123)
chr7 (13-80)||(35693822-35693889)
chr7 (13-80)||(36819621-36819688)
chr7 (13-80)||(40231933-40232000)
chr7 (13-80)||(37101018-37101085)
chr7 (13-55)||(46242472-46242514)
chr7 (13-55)||(4620097-4620139)
chr7 (13-55)||(28016145-28016187)
chr7 (13-55)||(38850732-38850774)
chr7 (13-55)||(47713424-47713466)
chr7 (13-78)||(40818689-40818754)
chr7 (13-55)||(31496637-31496679)
chr7 (13-55)||(38441843-38441885)
chr7 (13-80)||(32972319-32972386)
chr7 (13-51)||(9173328-9173366)
chr7 (13-55)||(18756629-18756671)
chr7 (13-51)||(41007948-41007986)
[»] chr5 (33 HSPs)
chr5 (13-80)||(1098180-1098247)
chr5 (13-80)||(14633012-14633079)
chr5 (13-80)||(1781137-1781204)
chr5 (13-80)||(14057713-14057780)
chr5 (13-80)||(20040407-20040474)
chr5 (13-78)||(19344691-19344756)
chr5 (13-82)||(20022863-20022932)
chr5 (13-80)||(31191169-31191236)
chr5 (13-80)||(40316823-40316890)
chr5 (13-80)||(41263121-41263188)
chr5 (13-80)||(41410651-41410718)
chr5 (13-79)||(30211733-30211799)
chr5 (13-58)||(13548240-13548285)
chr5 (13-80)||(1831356-1831423)
chr5 (13-80)||(14607549-14607616)
chr5 (13-78)||(8627142-8627207)
chr5 (13-80)||(30721677-30721744)
chr5 (13-80)||(33402583-33402650)
chr5 (13-74)||(41042829-41042890)
chr5 (19-55)||(2799661-2799697)
chr5 (13-80)||(9936880-9936947)
chr5 (13-80)||(27675545-27675612)
chr5 (13-80)||(32110664-32110731)
chr5 (13-55)||(30788235-30788277)
chr5 (13-55)||(34347497-34347539)
chr5 (19-55)||(2805827-2805863)
chr5 (13-76)||(34169838-34169901)
chr5 (13-80)||(39925208-39925275)
chr5 (13-55)||(967222-967264)
chr5 (13-51)||(2551619-2551657)
chr5 (13-51)||(20503040-20503078)
chr5 (13-55)||(28142958-28143000)
chr5 (13-55)||(40080011-40080053)
[»] chr4 (30 HSPs)
chr4 (13-80)||(43447170-43447237)
chr4 (13-82)||(39170961-39171030)
chr4 (13-82)||(46608216-46608285)
chr4 (13-80)||(3708258-3708325)
chr4 (13-80)||(10384853-10384920)
chr4 (13-80)||(31152666-31152733)
chr4 (13-80)||(37667765-37667832)
chr4 (13-80)||(39332821-39332888)
chr4 (13-80)||(40411600-40411667)
chr4 (13-80)||(55631866-55631933)
chr4 (13-80)||(48380478-48380545)
chr4 (13-82)||(43047390-43047459)
chr4 (13-80)||(28914373-28914440)
chr4 (13-80)||(8525407-8525474)
chr4 (13-80)||(31657347-31657414)
chr4 (13-55)||(29821080-29821122)
chr4 (13-51)||(33394111-33394149)
chr4 (13-78)||(6520442-6520507)
chr4 (13-80)||(42185279-42185346)
chr4 (20-55)||(48336426-48336461)
chr4 (13-55)||(1377533-1377575)
chr4 (13-55)||(1613209-1613251)
chr4 (13-79)||(23605893-23605959)
chr4 (13-55)||(47834135-47834177)
chr4 (13-55)||(1981373-1981415)
chr4 (14-80)||(28899063-28899129)
chr4 (13-55)||(37164046-37164088)
chr4 (13-63)||(50684942-50684992)
chr4 (13-51)||(53987771-53987809)
chr4 (14-55)||(24334373-24334414)
[»] chr3 (38 HSPs)
chr3 (13-80)||(901075-901142)
chr3 (13-80)||(9484601-9484668)
chr3 (13-80)||(29793365-29793432)
chr3 (13-80)||(42098614-42098681)
chr3 (13-80)||(48927789-48927856)
chr3 (13-80)||(49076413-49076480)
chr3 (20-80)||(29720400-29720460)
chr3 (13-80)||(12948045-12948112)
chr3 (13-80)||(16434844-16434911)
chr3 (13-80)||(34263691-34263758)
chr3 (13-82)||(34669611-34669680)
chr3 (13-80)||(29455695-29455762)
chr3 (13-80)||(34555156-34555223)
chr3 (13-80)||(50673682-50673749)
chr3 (13-82)||(38833952-38834021)
chr3 (13-79)||(36179123-36179189)
chr3 (13-78)||(53274982-53275047)
chr3 (13-80)||(38878465-38878532)
chr3 (21-80)||(46866348-46866407)
chr3 (13-82)||(1778364-1778433)
chr3 (24-80)||(14751040-14751096)
chr3 (13-76)||(36364750-36364811)
chr3 (13-80)||(2643256-2643323)
chr3 (13-80)||(4945838-4945905)
chr3 (13-80)||(28958986-28959053)
chr3 (13-67)||(26759497-26759551)
chr3 (13-54)||(49818788-49818829)
chr3 (13-80)||(29809350-29809417)
chr3 (20-55)||(43370321-43370356)
chr3 (13-56)||(43394545-43394588)
chr3 (13-55)||(4229175-4229217)
chr3 (13-55)||(18013457-18013499)
chr3 (13-43)||(29588415-29588445)
chr3 (13-51)||(32961280-32961318)
chr3 (13-55)||(36594406-36594448)
chr3 (22-80)||(44781979-44782037)
chr3 (13-55)||(52094081-52094123)
chr3 (13-55)||(53055612-53055654)
[»] chr8 (28 HSPs)
chr8 (13-82)||(25009147-25009216)
chr8 (13-80)||(30464437-30464504)
chr8 (13-80)||(14378675-14378742)
chr8 (13-80)||(23437802-23437869)
chr8 (13-80)||(44887704-44887771)
chr8 (13-78)||(25691586-25691651)
chr8 (13-82)||(37094135-37094204)
chr8 (13-80)||(761555-761622)
chr8 (13-55)||(8496875-8496917)
chr8 (13-76)||(4327108-4327171)
chr8 (13-80)||(20671261-20671328)
chr8 (13-80)||(28583292-28583359)
chr8 (13-55)||(11756806-11756848)
chr8 (13-55)||(21132917-21132959)
chr8 (13-82)||(38842165-38842235)
chr8 (13-78)||(4960158-4960223)
chr8 (13-80)||(43184768-43184835)
chr8 (13-78)||(43049258-43049323)
chr8 (20-80)||(3466288-3466348)
chr8 (13-80)||(15870180-15870247)
chr8 (13-80)||(44717301-44717368)
chr8 (13-55)||(17523835-17523877)
chr8 (13-55)||(18419028-18419070)
chr8 (13-51)||(29917917-29917955)
chr8 (13-51)||(30653394-30653432)
chr8 (13-55)||(40645639-40645681)
chr8 (19-55)||(2026602-2026638)
chr8 (13-45)||(25866103-25866135)
[»] scaffold0281 (1 HSPs)
scaffold0281 (13-80)||(13109-13176)
[»] scaffold0204 (1 HSPs)
scaffold0204 (20-55)||(23948-23983)
[»] scaffold0500 (1 HSPs)
scaffold0500 (13-55)||(667-709)
[»] scaffold1248 (1 HSPs)
scaffold1248 (13-51)||(1448-1486)
[»] scaffold0952 (1 HSPs)
scaffold0952 (13-51)||(827-865)
[»] scaffold0069 (1 HSPs)
scaffold0069 (13-51)||(4475-4513)
[»] scaffold0289 (1 HSPs)
scaffold0289 (22-55)||(9165-9198)


Alignment Details
Target: chr1 (Bit Score: 188; Significance: 1e-102; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 85 - 309
Target Start/End: Original strand, 49976118 - 49976342
Alignment:
Q  85 tatgtttttgcaagagaacatgaataaatattattagtatccttaatttcacaatgacgtttttgccaacataaactaacttttaatcnnnnnnnatttg 184  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||    
T  49976118 tatgtttttgcaagagaacaagaataaatattattagtatccttaatttcacaatgacgtttttgccaacataaactaacttttaatctttttttatttg 49976217  T
Q  185 aaggaatcaaaatcaactttcacctcatgtaaccaaacattccctaagccgctagctaatcttttttaaagtcacgagaagaactgtcccttattgtttg 284  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  49976218 aaggaatcaaaatcaactttcacctcatgtaaccaaacatgccctaagctgctagctaatcttttttaaagtcacgagaagaactgtcccttactgtttg 49976317  T
Q  285 attaactcaataaatattgtgtgtg 309  Q
    |||||||||||||||||||||||||    
T  49976318 attaactcaataaatattgtgtgtg 49976342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 6017445 - 6017514
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggaggaa 82  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||    
T  6017445 aatatggtcaaagtaagttagatcaaaattgcacattttcaaacagatcatttattgcgggacggaggaa 6017514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 45299390 - 45299323
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  45299390 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 45299323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 26543940 - 26543874
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggag 79  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||    
T  26543940 aatatggtcaaagtaagttaggtcaaaattgtacattttcaaacagatcatttattgcgggacggag 26543874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 8251145 - 8251212
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| | |||||| ||||||||||||    
T  8251145 aatatggtcaaagtaagttagatcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 8251212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 10100509 - 10100576
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||    
T  10100509 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagg 10100576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 10124181 - 10124120
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcggga 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||    
T  10124181 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcggga 10124120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 52749353 - 52749286
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||| |||||||||| |||||||||||||||||||||| | |||||| ||||||||||||    
T  52749353 aatatggtcaaaataagttaggtaaaaattgcacattttcaaacaggtcatttattgcgggacggagg 52749286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 1821624 - 1821666
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1821624 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 1821666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 29253551 - 29253486
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacgga 78  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| |||| || ||| ||||||||||    
T  29253551 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaatagatcatctattgcgggacgga 29253486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 5606387 - 5606454
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||| |||||||||||| |||||||||||| |||||||| || | |||||| ||||||||||||    
T  5606387 aatatggttaaagtaagttagatcaaaattgcactttttcaaataggtcatttattgcgggacggagg 5606454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 7075326 - 7075393
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||  | |||||| |||||| |||||    
T  7075326 aatatggtcaaagtaagttagatcaaaattgcacgttttcaaacaagtcatttattgcgggatggagg 7075393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 31932174 - 31932241
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||  ||||||||||||||| ||||||||| |||| || ||| ||||||||||||    
T  31932174 aatatggtcaaagtaaactaggtcaaaattgcaaattttcaaatagatcatctattgcgggacggagg 31932241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 41855717 - 41855784
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| || | ||||||  |||||||||||    
T  41855717 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattacgggacggagg 41855784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 44240591 - 44240524
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||| ||||||||||||||| ||||| ||| || | |||||| ||||||||||||    
T  44240591 aatatggtcaaagtaagctaggtcaaaattgcaaatttttaaataggtcatttattgcgggacggagg 44240524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 44452267 - 44452225
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  44452267 aatatggtcaaagtaagttaggtcaaaattacacattttcaaa 44452225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 10648197 - 10648244
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagat 60  Q
    |||||||||||| ||||||||||||||||| |||||||||||| ||||    
T  10648197 aatatggtcaaaataagttaggtcaaaattacacattttcaaatagat 10648244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 41414275 - 41414208
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| || | || ||| || |||||||||    
T  41414275 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtaatctattgcaggacggagg 41414208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 5945837 - 5945771
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggag 79  Q
    |||||||| ||| ||| ||| ||||||||||||||||||||||||  | |||||| |||||||||||    
T  5945837 aatatggttaaaataaattatgtcaaaattgcacattttcaaacatgtcatttattgcgggacggag 5945771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 48389138 - 48389096
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||||||||||||||| ||||||||||||||| |||||||||    
T  48389138 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaa 48389096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 52688595 - 52688559
Alignment:
Q  19 gtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||||||||||| ||||||||||||    
T  52688595 gtcaaagtaagttaggtcaaaattccacattttcaaa 52688559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 8048744 - 8048811
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||| |||| ||||||||||||||| ||||||||| || | || ||| || |||||||||    
T  8048744 aatatggtcaaaataagctaggtcaaaattgcaaattttcaaataggtcatctattgcaggacggagg 8048811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 28490232 - 28490165
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||  || |||||||||||| ||||||||| || | || ||| ||||||||||||    
T  28490232 aatatggtcaaagtaaactatgtcaaaattgcaaattttcaaataggtcatctattgcgggacggagg 28490165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 31651897 - 31651960
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacg 76  Q
    |||||||||||| ||||  |||| ||||||||||||||||||| || | |||||| ||||||||    
T  31651897 aatatggtcaaattaagccaggttaaaattgcacattttcaaataggtcatttattgcgggacg 31651960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 50014557 - 50014624
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||| ||| ||||||||||| ||||||||| |  | || |||| |||||||||||    
T  50014557 aatatggtcaaagtaagctagatcaaaattgcaaattttcaaataagtcatctatgacgggacggagg 50014624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 2126724 - 2126686
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacatttt 51  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  2126724 aatatggtcaaagtaaattaggtcaaaattacacatttt 2126686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 33730190 - 33730232
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||| ||||||||||| ||||||||| ||||||||||||    
T  33730190 aatatggttaaagtaagttatgtcaaaattacacattttcaaa 33730232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 40883483 - 40883445
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacatttt 51  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  40883483 aatatgatcaaagtaagttaggtcaaaatttcacatttt 40883445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 44741415 - 44741373
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||| |||||||| |||||||||||||| ||||||    
T  44741415 aatatggtcaaaataagttagatcaaaattgcacatattcaaa 44741373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 17496314 - 17496381
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  17496314 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggagg 17496381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 2667321 - 2667388
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  2667321 aatatagtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggagg 2667388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 24798542 - 24798609
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  24798542 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 24798609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 2397842 - 2397775
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  2397842 aatatggtcaaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 2397775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 29795523 - 29795456
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||    
T  29795523 aatatggttaaagtaagttagatcaaaattgcacattttcaaacagatcatttattgcgggacggagg 29795456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 2656666 - 2656731
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacgga 78  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||    
T  2656666 aatatagtcaaagtaagttaggtcaaaattgcacattttcaaacagctcatttattgcgggacgga 2656731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 28483110 - 28483046
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacgg 77  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||| |||||| |||||||||    
T  28483110 aatatggttaaagtaagttagatcaaaattgcacattttcaaacagatcatttattgcgggacgg 28483046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 30699333 - 30699266
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||| |||||| |||| |||||||    
T  30699333 aatatggtcaaagtaagttaggtcaaaattacacatttttaaacagatcatttattgcggaacggagg 30699266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 32541473 - 32541540
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||| |||||||||||||||| |||||||||||| | |||||| ||||||||||||    
T  32541473 aatatggtcaaagtaaattaggtcaaaattgcatattttcaaacaggtcatttattgcgggacggagg 32541540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 24825237 - 24825193
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  24825237 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 24825193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 9022912 - 9022845
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||| | |||||| || |||||||||    
T  9022912 aatatggtcaaagtatgttaggtcaaaattgcatattttcaaacaggtcatttattgcaggacggagg 9022845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 29515022 - 29515089
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||   ||||||||||    
T  29515022 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggttacttattaagggacggagg 29515089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 6142503 - 6142548
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacag 58  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  6142503 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacag 6142548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 6188652 - 6188696
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaaca 57  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  6188652 aatatgctcaaagtaagttaggtcaaaattgcacattttcaaaca 6188696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 13358581 - 13358539
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  13358581 aatatggtcaaagtaagttaggtcaaaattacacattttcaaa 13358539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 2141640 - 2141595
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacag 58  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||    
T  2141640 aatatgatcaaagtaagttaggtcaaaattgtacattttcaaacag 2141595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 16661598 - 16661665
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||| ||||||||||||||||||||||||| ||||||||||||  ||| || ||| ||||||| ||||    
T  16661598 aatacggtcaaagtaagttaggtcaaaattacacattttcaaatggatcatctattgcgggactgagg 16661665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 4890122 - 4890160
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacatttt 51  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  4890122 aatatggtcaaagtaaattaggtcaaaattgcacatttt 4890160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 16969450 - 16969408
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||| ||| ||||||||||||||||||||||    
T  16969450 aatatggtcaaagtaaattaagtcaaaattgcacattttcaaa 16969408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 35117352 - 35117310
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||||||| || |||||||||||||||||||    
T  35117352 aatatggtcaaagtaagttatgttaaaattgcacattttcaaa 35117310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 10109413 - 10109445
Alignment:
Q  19 gtcaaagtaagttaggtcaaaattgcacatttt 51  Q
    |||||||||||||||||||||||||||||||||    
T  10109413 gtcaaagtaagttaggtcaaaattgcacatttt 10109445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 24949600 - 24949540
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||| |||||||||||||||||||||  | | || ||| ||||||||||||    
T  24949600 tcaaagtaagttagatcaaaattgcacattttcaaatgggtcatctattgcgggacggagg 24949540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 995635 - 995568
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||| |||||||||| || |||||||||| ||||||||||||||  | |||||| || |||||||||    
T  995635 aatatagtcaaagtaaatttggtcaaaattacacattttcaaacatgtcatttattgcaggacggagg 995568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 31708965 - 31708898
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||| ||||||||||| ||| |||||||||||||||||| ||| |||| || ||| || |||||||||    
T  31708965 aatacggtcaaagtaaattaagtcaaaattgcacatttttaaatagatcatctattgcaggacggagg 31708898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 32673820 - 32673755
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacgga 78  Q
    |||||||||||| |||||||| ||||||||||| ||||| ||| |||| || |||  |||||||||    
T  32673820 aatatggtcaaaataagttagatcaaaattgcaaatttttaaatagatcatctattacgggacgga 32673755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 12209061 - 12208992
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggaggaa 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||    
T  12209061 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggaa 12208992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 7724602 - 7724669
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  7724602 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 7724669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 8373506 - 8373439
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||    
T  8373506 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacagagg 8373439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 31603407 - 31603474
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| | |||||| | ||||||||||    
T  31603407 aatattgtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgtgggacggagg 31603474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 40471808 - 40471741
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||    
T  40471808 aatatgatcaaaataagttaagtcaaaattgcacattttcaaacaggttatttattgcgggacggagg 40471741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 16126073 - 16126139
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggag 79  Q
    |||||||||||||||||||||||||||||||||||||||||||  | | |||||| |||||||||||    
T  16126073 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatttattgcgggacggag 16126139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 16333552 - 16333486
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggag 79  Q
    |||||||||||||||||||||||||||||||||||||||||||  | | |||||| |||||||||||    
T  16333552 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatttattgcgggacggag 16333486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 38963867 - 38963822
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacag 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  38963867 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacag 38963822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 10333569 - 10333636
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||  || ||||||||    
T  10333569 aatatggtcaaaataagttaggtcaaaattacacattttcaaacagatcatttattacgagacggagg 10333636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 16127771 - 16127838
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||| ||||||||||||||||||||||| |||||||||||| || | |||||| ||||||||||||    
T  16127771 aatatgatcaaagtaagttaggtcaaaattacacattttcaaataggtcatttattgcgggacggagg 16127838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 8896343 - 8896301
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8896343 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 8896301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 5096320 - 5096253
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||| ||||| ||||||| |||||||||| |||||||||||||| | |||||| ||||||||||||    
T  5096320 aatatgatcaaaataagttatgtcaaaattgtacattttcaaacaggtaatttattgcgggacggagg 5096253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 41436904 - 41436837
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||||||||||||||||  |||||||||||||  | ||||||  |||||||||||    
T  41436904 aatatggtcaaagtaagttaggtcaaaattatacattttcaaacatttcatttattacgggacggagg 41436837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 41575634 - 41575567
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||| |||||||||| ||||||||||||||| ||||||||| || | |||||| ||||||||||||    
T  41575634 aatatgatcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgggacggagg 41575567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 22718534 - 22718588
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttat 67  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| |||| ||||||    
T  22718534 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaatagatcatttat 22718588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 11277623 - 11277562
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcggga 74  Q
    |||||| ||||||||||||| |||||||||||||||||||||| || | |||||| ||||||    
T  11277623 aatatgatcaaagtaagttatgtcaaaattgcacattttcaaataggtcatttattgcggga 11277562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 2831779 - 2831715
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacgg 77  Q
    |||||||||||||||||||||||||||||| |||||||| |||  ||| |||||| |||| ||||    
T  2831779 aatatggtcaaagtaagttaggtcaaaattacacatttttaaatggatcatttatcgcggtacgg 2831715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 44022340 - 44022297
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaac 56  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||    
T  44022340 aatatagtcaaagtaagttaggttaaaattgcacattttcaaac 44022297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 18504544 - 18504502
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||    
T  18504544 aatatggtcaaaataagttacgtcaaaattacacattttcaaa 18504502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 37987927 - 37987981
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttat 67  Q
    |||||| ||||||||| |||| |||||||||| ||||||||||||| | ||||||    
T  37987927 aatatgatcaaagtaacttagatcaaaattgcgcattttcaaacaggtcatttat 37987981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 43328792 - 43328834
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||||||||||||||||||| ||||||||  |||||||||||    
T  43328792 aatatggtcaaagtaagttagatcaaaattatacattttcaaa 43328834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 6730094 - 6730135
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaa 54  Q
    ||||||||||| ||||| ||||||||||||||| ||||||||    
T  6730094 aatatggtcaatgtaagctaggtcaaaattgcaaattttcaa 6730135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 5448 - 5381
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  5448 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 5381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 184038 - 183971
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||    
T  184038 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggttatttattgcgagacggagg 183971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 30462213 - 30462280
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||    
T  30462213 aatatggtcaaagtaagttaagtcaaaattgcacattttcaaacagatcatttattgcgggacggagg 30462280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 16807138 - 16807205
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||  |||||||||||    
T  16807138 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagg 16807205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 25274011 - 25274074
Alignment:
Q  15 tatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacgga 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||    
T  25274011 tatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcaggacgga 25274074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 38069123 - 38069056
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||| |||||||    
T  38069123 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcggaacggagg 38069056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 35693822 - 35693889
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| | |||||| ||| ||||||||    
T  35693822 aatatggtcgaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgcgacggagg 35693889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 36819688 - 36819621
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| | |||||| |||| |||||||    
T  36819688 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcggaacggagg 36819621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 40232000 - 40231933
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||  |||||||||||    
T  40232000 aatatggtcaaaataaattaggtcaaaattgcacattttcaaacaggttatttattacgggacggagg 40231933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 37101018 - 37101085
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||| |||||||||||| || | || ||| ||||||||||||    
T  37101018 aatatggtcaaagtaagttaggtcaaaattacacattttcaaataggtcatctattgcgggacggagg 37101085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 46242472 - 46242514
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  46242472 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 46242514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 4620139 - 4620097
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  4620139 aatatggtcaaagtaagttaggtcaaaattacacattttcaaa 4620097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 28016187 - 28016145
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  28016187 aatatggtcaaagtaagttagatcaaaattgcacattttcaaa 28016145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 38850774 - 38850732
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  38850774 aatatggtcaaagtaagttaggtcaaaattacacattttcaaa 38850732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 47713424 - 47713466
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  47713424 aatacggtcaaagtaagttaggtcaaaattgcacattttcaaa 47713466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 40818689 - 40818754
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacgga 78  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||| || |||  |||||||||    
T  40818689 aatatggtcagagtaagttagatcaaaattgcacattttcaaatagatcatctattacgggacgga 40818754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 31496637 - 31496679
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  31496637 aatacggtcaaagtaagttaggtcaaaattgtacattttcaaa 31496679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 38441885 - 38441843
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||||||||||||||||||||| |||||| ||||||||||||    
T  38441885 aatatggtcaaagtaagttaggtaaaaattacacattttcaaa 38441843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 32972319 - 32972386
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||| || | || ||| |||||| |||||    
T  32972319 aatatggtcaaagtaagctaggtcaaacttgcaaattttcaaataggtcatctattgcgggagggagg 32972386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 9173328 - 9173366
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacatttt 51  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  9173328 aatatggtcaaagtaagttaggtcaaaattacacgtttt 9173366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 18756671 - 18756629
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||| ||||||||||| ||||||||||||||| |||||||||    
T  18756671 aatatagtcaaagtaagataggtcaaaattgcatattttcaaa 18756629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 41007948 - 41007986
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacatttt 51  Q
    |||||||||||||||||||||||||||||| || |||||    
T  41007948 aatatggtcaaagtaagttaggtcaaaattacatatttt 41007986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 1098247 - 1098180
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  1098247 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 1098180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 14633079 - 14633012
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||    
T  14633079 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcaggacggagg 14633012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 1781137 - 1781204
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  1781137 aatatggtcaaagtaacttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 1781204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 14057780 - 14057713
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||    
T  14057780 aatatgatcaaagtaagttaggtcaaaattgcatattttcaaacagatcatttattgcgggacggagg 14057713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 20040407 - 20040474
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||  |||||||||||    
T  20040407 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagg 20040474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 19344691 - 19344756
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacgga 78  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| | |||||| ||||||||||    
T  19344691 aatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacgga 19344756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 20022932 - 20022863
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggaggaa 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||| || |||||||    
T  20022932 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgagaaggaggaa 20022863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 31191169 - 31191236
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||| ||||||||||||||||||||||||||||  | |||||| ||||||||||||    
T  31191169 aatatggtcaaagtaaattaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagg 31191236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 40316890 - 40316823
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  40316890 aatatggtcgaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 40316823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 41263121 - 41263188
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| || |||||| | ||||||||||    
T  41263121 aatatggtcaaagtaagttaggtcaaaattgcacatttttaaacatatcatttattgagggacggagg 41263188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 41410651 - 41410718
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  41410651 aatatggtcgaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 41410718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 30211733 - 30211799
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggag 79  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| | |||||| |||||||||||    
T  30211733 aatatggtcaaagtaagttagatcaaaattgcacatttttaaacaggtcatttattgcgggacggag 30211799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 13548285 - 13548240
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacag 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  13548285 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacag 13548240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 1831423 - 1831356
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||| |||||| ||| ||||||||||||||||||||||||| | |||||| ||||||||||||    
T  1831423 aatatggtcgaagtaaattatgtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 1831356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 14607549 - 14607616
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||  | |||||| ||||||||||||    
T  14607549 aatatggtcaaattaaattaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagg 14607616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 8627207 - 8627142
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacgga 78  Q
    ||||||||||||||||||||| ||||||||||||||||||||| || | || ||| ||||||||||    
T  8627207 aatatggtcaaagtaagttagatcaaaattgcacattttcaaataggtcatctattgcgggacgga 8627142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 30721677 - 30721744
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||| |||||||||||||||||||||||||||||| |  | |||||| |||||| |||||    
T  30721677 aatatggtcaaaataagttaggtcaaaattgcacattttcaaatatgtcatttattgcgggatggagg 30721744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 33402583 - 33402650
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||||| || |||  |||||||||||    
T  33402583 aatatgatcaaagtaagttaggtcaaaattacacatttttaaacagatcatctattacgggacggagg 33402650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 41042829 - 41042890
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcggga 74  Q
    ||||||||||||||||| ||| ||||||||||| ||||||||| || |||||||| ||||||    
T  41042829 aatatggtcaaagtaagctagatcaaaattgcaaattttcaaataggttatttattgcggga 41042890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 2799697 - 2799661
Alignment:
Q  19 gtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||||||||||||||||||||||||    
T  2799697 gtcaaagtaagttaggtcaaaattgcacattttcaaa 2799661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 9936880 - 9936947
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||| ||| |||| ||||||||||||||||| ||| | || |||||| ||||||||||||    
T  9936880 aatatggtcaaaataaattagatcaaaattgcacatttttaaatatatcatttattgcgggacggagg 9936947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 27675612 - 27675545
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||| |||||||||| ||||||||||||||| ||||||||| |  | |||||| ||||||||||||    
T  27675612 aatatgatcaaagtaagctaggtcaaaattgcaaattttcaaataagtcatttattgcgggacggagg 27675545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 32110664 - 32110731
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||| ||||||||||| |||| |||||||||||||||||||||  |||||| ||| |||| |||||||    
T  32110664 aatacggtcaaagtaaattagatcaaaattgcacattttcaaatggattatctattgcggaacggagg 32110731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 30788277 - 30788235
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||||||| ||||||||| ||||||||||||    
T  30788277 aatatggtcaaagtaagttatgtcaaaattacacattttcaaa 30788235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 34347539 - 34347497
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||||||| ||||||||| ||||||||||||    
T  34347539 aatatggtcaaagtaagttatgtcaaaattacacattttcaaa 34347497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 2805863 - 2805827
Alignment:
Q  19 gtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||| ||||||||||||||||||||||||||    
T  2805863 gtcaaagtaaattaggtcaaaattgcacattttcaaa 2805827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 34169901 - 34169838
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacg 76  Q
    ||||||||||||||||  ||| ||||||||||| ||||||||| |||| || ||| ||||||||    
T  34169901 aatatggtcaaagtaaactagatcaaaattgcaaattttcaaatagatcatctattgcgggacg 34169838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 39925275 - 39925208
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||| || |||||||||| || |||||||||  ||| || ||| ||||||||||||    
T  39925275 aatatggtcaaagtaaatttggtcaaaattacaaattttcaaatggatcatctattgcgggacggagg 39925208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 967264 - 967222
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||| || |||||||||||||||||||||||| |||||||||    
T  967264 aatatagttaaagtaagttaggtcaaaattgcaaattttcaaa 967222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 2551619 - 2551657
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacatttt 51  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  2551619 aatatggttaaaataagttaggtcaaaattgcacatttt 2551657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 20503040 - 20503078
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacatttt 51  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  20503040 aatatggtctaagtaagttaggtcaaaattacacatttt 20503078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 28143000 - 28142958
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||| |||| | |||||||||||||||||||    
T  28143000 aatatggtcaaagtaaattagattaaaattgcacattttcaaa 28142958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 40080053 - 40080011
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||||||||||||||||||||| ||||||| | |||||||||    
T  40080053 aatatggtcaaagtaagttaggttaaaattgtaaattttcaaa 40080011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 43447237 - 43447170
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||    
T  43447237 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattacgggacggagg 43447170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 39171030 - 39170961
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggaggaa 82  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||    
T  39171030 aatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggaa 39170961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 46608285 - 46608216
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggaggaa 82  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||    
T  46608285 aatatggtcaaagtaagttaggtcaaaatttcacattttcaaacaggtcatttattgcgggacggaggaa 46608216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 3708325 - 3708258
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  3708325 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgtgggacggagg 3708258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 10384920 - 10384853
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  10384920 aatatggttaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 10384853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 31152733 - 31152666
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||| | ||||||||||    
T  31152733 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgtgggacggagg 31152666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 37667765 - 37667832
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  37667765 aatatggtcaaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 37667832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 39332821 - 39332888
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||| ||||||||    
T  39332821 aatatggtcaaagtaagttagttcaaaattgcacattttcaaacagatcatttattgcgtgacggagg 39332888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 40411600 - 40411667
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||  |||||||||||    
T  40411600 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagg 40411667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 55631866 - 55631933
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  55631866 aatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 55631933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 48380545 - 48380478
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| | | |||| ||||||||||||    
T  48380545 aatatggtcaaagtaagttaggtcaaaaatgcacattttcaaacaggtcacttattgcgggacggagg 48380478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 43047459 - 43047390
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggaggaa 82  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  | |||||| |||||| |||||||    
T  43047459 aatatggtcaaagtaagttaggttaaaattgcacattttcaaacaagtcatttattgcgggatggaggaa 43047390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 28914440 - 28914373
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||||||||||||||||| | ||||| |||||| |||||||| |||| |||||||    
T  28914440 aatatggtcaaagtaagttaggtcaaaattgtaaattttgaaacagtttatttattgcggaacggagg 28914373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 8525407 - 8525474
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| | ||||||   ||||||||||    
T  8525407 aatatgatcaaagtaagttaggtcaaaattgcatattttcaaacaggtcatttattatgggacggagg 8525474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 31657347 - 31657414
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||| ||||||||||||||| ||||| ||| || | |||||| ||||||||||||    
T  31657347 aatatggtcaaagtaagctaggtcaaaattgcaaatttttaaataggtcatttattgcgggacggagg 31657414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 29821122 - 29821080
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  29821122 aatatggtcaaagtaagttagatcaaaattgcacattttcaaa 29821080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 33394149 - 33394111
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacatttt 51  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33394149 aatatggtcaaagtaagttaggtcaaaattgcacatttt 33394111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 6520507 - 6520442
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacgga 78  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||| || | |||||| ||||||||||    
T  6520507 aatatagtcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgggacgga 6520442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 42185346 - 42185279
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||| ||| |||||||||||||||| |||||||||  ||| || ||| ||||||||||||    
T  42185346 aatatggtcaaactaaattaggtcaaaattgcaaattttcaaatggatcatctattgcgggacggagg 42185279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 48336426 - 48336461
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  48336426 tcaaagtaagttaggtcaaaattgcacattttcaaa 48336461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 1377575 - 1377533
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||||||||||||||| ||||||||||||||| |||||||||    
T  1377575 aatatggtcaaagtaagataggtcaaaattgcaaattttcaaa 1377533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 1613209 - 1613251
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||| ||||||||||||| ||||||||||||    
T  1613209 aatatggtcaaagtaaattaggtcaaaattacacattttcaaa 1613251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 23605893 - 23605959
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggag 79  Q
    |||||| |||||||||| ||||||||||||| | ||||||||| |||| |||||| |||||| ||||    
T  23605893 aatatgatcaaagtaagctaggtcaaaattgtaaattttcaaatagatcatttattgcgggatggag 23605959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 47834135 - 47834177
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||||||| ||||||||| ||||||||||||    
T  47834135 aatatggtcaaagtaagttatgtcaaaattacacattttcaaa 47834177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 1981373 - 1981415
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||||||||||||||||||| |||||||| || |||||||||    
T  1981373 aatatggtcaaagtaagttagatcaaaattacaaattttcaaa 1981415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 28899063 - 28899129
Alignment:
Q  14 atatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||  ||||||||||||||| ||||||||| || | || ||| ||||||| ||||    
T  28899063 atatggtcaaagtaaactaggtcaaaattgcaaattttcaaataggtcatctattgcgggacagagg 28899129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 37164088 - 37164046
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||| ||||||||||||||||||||||||| | |||||||||    
T  37164088 aatatagtcaaagtaagttaggtcaaaattgtatattttcaaa 37164046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 50684992 - 50684942
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattat 63  Q
    |||||| |||||||||||||| ||||||||||| ||||| ||| |||||||    
T  50684992 aatatgatcaaagtaagttagatcaaaattgcatatttttaaatagattat 50684942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 53987771 - 53987809
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacatttt 51  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  53987771 aatatggtcaaagtaagttaggttaatattgcacatttt 53987809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 24334373 - 24334414
Alignment:
Q  14 atatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||  ||||||||||||||| |||||||||    
T  24334373 atatggtcaaagtaaactaggtcaaaattgcaaattttcaaa 24334414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 901075 - 901142
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  901075 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggagg 901142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 9484668 - 9484601
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  9484668 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 9484601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 29793365 - 29793432
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  29793365 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 29793432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 42098614 - 42098681
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  42098614 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 42098681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 48927789 - 48927856
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||    
T  48927789 aatatggtcaaagtaagttaggtaaaaattgcacattttcaaacagatcatttattgcgggacggagg 48927856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 49076413 - 49076480
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  49076413 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 49076480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 29720460 - 29720400
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  29720460 tcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggagg 29720400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 12948112 - 12948045
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||    
T  12948112 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagg 12948045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 16434844 - 16434911
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  16434844 aatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 16434911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 34263691 - 34263758
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| | |||||| ||||||||||||    
T  34263691 aatatggtcaaagtaagttaggtcaaaattgcacatttttaaacaggtcatttattgcgggacggagg 34263758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 34669680 - 34669611
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggaggaa 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||||    
T  34669680 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggaggaa 34669611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 29455695 - 29455762
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||  | |||||||||    
T  29455695 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacaggacggagg 29455762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 34555223 - 34555156
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| | | |||| ||||||||||||    
T  34555223 aatatggtcaaagtaagttaggtcaaaaatgcacattttcaaacaggtcacttattgcgggacggagg 34555156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 50673749 - 50673682
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| | |||||| |||| |||||||    
T  50673749 aatatggtcaaagtaagttaagtcaaaattgcacattttcaaacaggtcatttattgcggaacggagg 50673682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 38833952 - 38834021
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggaggaa 82  Q
    |||||||||||||||||||||||||||||| |||||||| |||||| | |||||| ||||||| ||||||    
T  38833952 aatatggtcaaagtaagttaggtcaaaattacacatttttaaacaggtcatttattgcgggacagaggaa 38834021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 36179123 - 36179189
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggag 79  Q
    |||||| ||||||||| ||| ||||||||||||||||||||||||| |||||||| | |||||||||    
T  36179123 aatatgatcaaagtaaattaagtcaaaattgcacattttcaaacaggttatttattgtgggacggag 36179189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 53274982 - 53275047
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacgga 78  Q
    |||||| ||||| |||||||||||||||||||||||||||||| || | |||||| ||||||||||    
T  53274982 aatatgatcaaaataagttaggtcaaaattgcacattttcaaataggtcatttattgcgggacgga 53275047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 38878465 - 38878532
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||||| | ||||||  |||||||||||    
T  38878465 aatatggtcaaaataatttatgtcaaaattgcacattttcaaacaggtcatttattacgggacggagg 38878532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 46866407 - 46866348
Alignment:
Q  21 caaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||| ||||||||||||||||||||||||||||||||  | |||||| ||||||||||||    
T  46866407 caaaataagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagg 46866348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 1778433 - 1778364
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggaggaa 82  Q
    ||||||||||||||||| || |||||||||||| ||||||||| || | || ||| ||||||||||||||    
T  1778433 aatatggtcaaagtaagctaagtcaaaattgcaaattttcaaataggtcatctattgcgggacggaggaa 1778364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 14751040 - 14751096
Alignment:
Q  24 agtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||||||||||||||||||||| | || ||| |||||| |||||    
T  14751040 agtaagttaggtcaaaattgcacattttcaaacaggtcatctattgcgggagggagg 14751096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 36364750 - 36364811
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacg 76  Q
    |||||||||||| ||||||||||||||||||  |||||||||| || |||||||| ||||||||    
T  36364750 aatatggtcaaaataagttaggtcaaaattg--cattttcaaataggttatttattgcgggacg 36364811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 2643256 - 2643323
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||  ||||||||||||||| ||||||||| || | || ||| ||||||||||||    
T  2643256 aatatggtcaaagtaaactaggtcaaaattgcaaattttcaaataggtcatctattgcgggacggagg 2643323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 4945838 - 4945905
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| |  | || ||||| ||||||||||    
T  4945838 aatatggtcaaagtaagttaggtcaaaattgcaaattctcaaatacgtcatctatggtgggacggagg 4945905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 28958986 - 28959053
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||| ||||||||||||||| ||||| ||| |||| || ||| ||| ||||||||    
T  28958986 aatatggtcaaagtaagctaggtcaaaattgcaaatttttaaatagatcatctattgcgagacggagg 28959053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 26759551 - 26759497
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttat 67  Q
    |||||||||||||||||||||||||||||| || ||||| ||| |||| ||||||    
T  26759551 aatatggtcaaagtaagttaggtcaaaattacaaatttttaaatagatcatttat 26759497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 49818829 - 49818788
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaa 54  Q
    |||||||||||||||| |||||||||||||||| ||||||||    
T  49818829 aatatggtcaaagtaaattaggtcaaaattgcaaattttcaa 49818788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 29809417 - 29809350
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||| ||||||| ||| ||||||||||| ||||||||| || | || ||| ||||||||||||    
T  29809417 aatatggtcgaagtaagctagatcaaaattgcaaattttcaaataggtcatctattgcgggacggagg 29809350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 43370356 - 43370321
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||||||||||| ||||||||||||||||||||||    
T  43370356 tcaaagtaagttatgtcaaaattgcacattttcaaa 43370321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 43394545 - 43394588
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaac 56  Q
    |||||||||||| |||||||| ||| ||||||||||||||||||    
T  43394545 aatatggtcaaaataagttagatcagaattgcacattttcaaac 43394588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 4229175 - 4229217
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| |||||||||| ||||||||||||||| |||||||||    
T  4229175 aatatgatcaaagtaagctaggtcaaaattgcaaattttcaaa 4229217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 18013457 - 18013499
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||||||| ||| ||||||||||||||||||||||    
T  18013457 aatatgatcaaagtaaattatgtcaaaattgcacattttcaaa 18013499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 43
Target Start/End: Complemental strand, 29588445 - 29588415
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattg 43  Q
    |||||||||||||||||||||||||||||||    
T  29588445 aatatggtcaaagtaagttaggtcaaaattg 29588415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 32961318 - 32961280
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacatttt 51  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  32961318 aatatggtcaaactaagttaggtcaaaattgcaaatttt 32961280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 36594406 - 36594448
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||    
T  36594406 aatatgatcaaaataagttaggtcaaaattacacattttcaaa 36594448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 44781979 - 44782037
Alignment:
Q  22 aaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||| ||||||||||| ||||||||| || | || ||| ||||||||||||    
T  44781979 aaagtaagttagttcaaaattgcaaattttcaaataggtcatctattgcgggacggagg 44782037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 52094081 - 52094123
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||| |||||||| ||||||||||| |||||||||    
T  52094081 aatatggtcaaattaagttagatcaaaattgcaaattttcaaa 52094123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 53055612 - 53055654
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||| | ||||||||||||||| ||||||||||||    
T  53055612 aatatggtcaaaattagttaggtcaaaattacacattttcaaa 53055654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 5e-22; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 25009216 - 25009147
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggaggaa 82  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||| | ||||||||||||    
T  25009216 aatatggtcaaagtaaattaggtcaaaattgcacattttcaaacagatcatttattgagggacggaggaa 25009147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 30464504 - 30464437
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||    
T  30464504 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagg 30464437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 14378675 - 14378742
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  || |||||| ||||||||||||    
T  14378675 aatatagtcaaagtaagttaggtcaaaattgcacattttcaaacctatcatttattgcgggacggagg 14378742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 23437802 - 23437869
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  23437802 aatatggtcaaagcaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 23437869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 44887704 - 44887771
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||| ||||| |||||||||||||||||||||||| |||| |||||| ||||||||||||    
T  44887704 aatatggtcaaactaagtcaggtcaaaattgcacattttcaaatagatcatttattgcgggacggagg 44887771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 25691586 - 25691651
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacgga 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | |||||| |||| |||||    
T  25691586 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcggaacgga 25691651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 37094204 - 37094135
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggaggaa 82  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| || | |||||| ||||||||||||||    
T  37094204 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgggacggaggaa 37094135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 761622 - 761555
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||| | |||||| ||||||| ||||    
T  761622 aatatggtcaaagtaaattaggtcaaaattacacattttcaaacaggtcatttattgcgggacagagg 761555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 8496875 - 8496917
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8496875 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 8496917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 4327108 - 4327171
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacg 76  Q
    |||||| |||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||    
T  4327108 aatatgatcaaagtaagttagatcaaaattgcacattttcaaacaagtcatttattgcgggacg 4327171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 20671328 - 20671261
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||| || ||| ||| ||||||||    
T  20671328 aatatggtcaaagtaagttaggtcaaaattacacattttcaaattgatcatctattgcgcgacggagg 20671261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 28583292 - 28583359
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||| ||||||||| |||||||||||||||||||||||||| || | || ||| ||||||||||||    
T  28583292 aatatgctcaaagtaaattaggtcaaaattgcacattttcaaaaaggtcatctattgcgggacggagg 28583359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 11756848 - 11756806
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  11756848 aatatggtcaaagtaagttaggtcaaaattgcaaattttcaaa 11756806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 21132917 - 21132959
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  21132917 aatatggtcaaagtaagttaagtcaaaattgcacattttcaaa 21132959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 38842235 - 38842165
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcaca-ttttcaaacagattatttatggcgggacggaggaa 82  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||||| | ||||||  |||||||||||||    
T  38842235 aatatgatcaaagtaagttaggtcaaaattacacatttttcaaacaggtcatttattacgggacggaggaa 38842165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 4960223 - 4960158
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacgga 78  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| |||| || |||  |||||||||    
T  4960223 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaatagatcatctattacgggacgga 4960158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 43184768 - 43184835
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||||||||||||||||||||||||||  |||||||| |||||| | |||||| || ||| |||||    
T  43184768 aatatggtcaaagtaagttaggtcaaaataacacatttttaaacaggtcatttattgcaggatggagg 43184835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 43049258 - 43049323
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacgga 78  Q
    |||||||||||||| || ||| |||||||| || ||||||||| |||| |||||| ||||||||||    
T  43049258 aatatggtcaaagttagctagatcaaaattacaaattttcaaatagatcatttattgcgggacgga 43049323  T

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Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 3466348 - 3466288
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||||||||||| ||||||||||  | | || ||| ||||||||||||    
T  3466348 tcaaagtaagttaggtcaaaattgcgcattttcaaatgggtcatctattgcgggacggagg 3466288  T

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Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 15870247 - 15870180
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||| ||||||||| |||| |||||||||  ||||||||||||| ||||||||  | |||||||||    
T  15870247 aatatgatcaaagtaaattagatcaaaattgttcattttcaaacaggttatttattactggacggagg 15870180  T

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Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 44717368 - 44717301
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    |||||| |||||||||||||| |||||||| ||||||||||||  ||| ||  || ||||||||||||    
T  44717368 aatatgatcaaagtaagttagttcaaaattacacattttcaaatggatcatccattgcgggacggagg 44717301  T

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Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 17523877 - 17523835
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| |||||||||||||||| |||| ||||||||||||||    
T  17523877 aatatgatcaaagtaagttaggttaaaactgcacattttcaaa 17523835  T

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Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 18419070 - 18419028
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||||||||||||||| |||||||||||| || |||||||||    
T  18419070 aatatggtcaaagtaagctaggtcaaaattacaaattttcaaa 18419028  T

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Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 29917917 - 29917955
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacatttt 51  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  29917917 aatatggtcaaaataagttaggtcaaaattacacatttt 29917955  T

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Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 30653432 - 30653394
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacatttt 51  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  30653432 aatatggtcaaagtaagttagattaaaattgcacatttt 30653394  T

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Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 40645681 - 40645639
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| |||||||||||||||||||||||| | |||||||||    
T  40645681 aatatgatcaaagtaagttaggtcaaaattgaaaattttcaaa 40645639  T

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Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 2026638 - 2026602
Alignment:
Q  19 gtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||||||||||||||||||||||  |||||||||||    
T  2026638 gtcaaagtaagttaggtcaaaattaaacattttcaaa 2026602  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 25866135 - 25866103
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgca 45  Q
    ||||||||||||||||||||| |||||||||||    
T  25866135 aatatggtcaaagtaagttagatcaaaattgca 25866103  T

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Target: scaffold0281 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 13176 - 13109
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagattatttatggcgggacggagg 80  Q
    ||||||||||||||||| ||||||||||||||| ||||| |||||| | |||||| | ||||||||||    
T  13176 aatatggtcaaagtaagctaggtcaaaattgcaaatttttaaacaggtcatttattgtgggacggagg 13109  T

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Target: scaffold0204 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 23948 - 23983
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  23948 tcaaagtaagttaggtcaaaattgcacattttcaaa 23983  T

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Target: scaffold0500 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 667 - 709
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||| |||||||||||||||||||| |||||||||    
T  667 aatatggtcaaactaagttaggtcaaaattgcatattttcaaa 709  T

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Target: scaffold1248 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 1448 - 1486
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacatttt 51  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  1448 aatatggtcaaagtaagttatgtcaaaattacacatttt 1486  T

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Target: scaffold0952 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 865 - 827
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacatttt 51  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  865 aatatggtcaaagtaagttatgtcaaaattacacatttt 827  T

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Target: scaffold0069 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 4513 - 4475
Alignment:
Q  13 aatatggtcaaagtaagttaggtcaaaattgcacatttt 51  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  4513 aatacggtcaaaataagttaggtcaaaattgcacatttt 4475  T

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Target: scaffold0289 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 9198 - 9165
Alignment:
Q  22 aaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||| |||||||||||||||||||||    
T  9198 aaagtaagttagatcaaaattgcacattttcaaa 9165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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