View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2244_low_19 (Length: 240)

Name: NF2244_low_19
Description: NF2244
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2244_low_19
NF2244_low_19
[»] chr4 (45 HSPs)
chr4 (1-216)||(4937750-4937965)
chr4 (8-153)||(9048644-9048789)
chr4 (8-111)||(52944333-52944436)
chr4 (11-88)||(52060910-52060987)
chr4 (8-111)||(9713934-9714037)
chr4 (8-101)||(10496367-10496460)
chr4 (17-110)||(51888204-51888297)
chr4 (51-111)||(18138908-18138968)
chr4 (51-111)||(49126121-49126181)
chr4 (8-87)||(8670531-8670610)
chr4 (18-155)||(17949318-17949453)
chr4 (18-155)||(17953170-17953305)
chr4 (7-63)||(53444188-53444244)
chr4 (50-101)||(7393303-7393354)
chr4 (180-227)||(52944219-52944266)
chr4 (25-107)||(18048909-18048991)
chr4 (17-111)||(28857424-28857518)
chr4 (8-111)||(33332553-33332658)
chr4 (17-111)||(36161733-36161827)
chr4 (8-101)||(21662469-21662562)
chr4 (8-101)||(21671233-21671326)
chr4 (17-82)||(27651995-27652060)
chr4 (17-82)||(36194760-36194825)
chr4 (17-101)||(9643420-9643504)
chr4 (17-101)||(38166223-38166306)
chr4 (17-101)||(48351179-48351263)
chr4 (17-100)||(12199686-12199769)
chr4 (17-88)||(54021905-54021976)
chr4 (183-217)||(2520695-2520729)
chr4 (183-217)||(24099227-24099261)
chr4 (179-209)||(37188708-37188738)
chr4 (179-209)||(43444336-43444366)
chr4 (179-209)||(52978750-52978780)
chr4 (11-76)||(1621491-1621556)
chr4 (52-101)||(3336152-3336201)
chr4 (15-76)||(6155217-6155278)
chr4 (179-216)||(43095549-43095586)
chr4 (179-216)||(54021780-54021817)
chr4 (8-101)||(56156626-56156719)
chr4 (182-214)||(1621654-1621686)
chr4 (8-66)||(11299978-11300033)
chr4 (182-214)||(27651868-27651900)
chr4 (7-63)||(32766584-32766640)
chr4 (8-107)||(36204363-36204467)
chr4 (17-101)||(37030293-37030377)
[»] chr1 (44 HSPs)
chr1 (7-110)||(1602096-1602198)
chr1 (8-111)||(49626919-49627021)
chr1 (8-111)||(24582956-24583058)
chr1 (8-111)||(47132908-47133011)
chr1 (8-154)||(16161795-16161946)
chr1 (8-82)||(48750219-48750293)
chr1 (7-100)||(44915655-44915748)
chr1 (8-100)||(27580112-27580204)
chr1 (17-111)||(6217820-6217914)
chr1 (17-111)||(12635175-12635269)
chr1 (17-111)||(16262866-16262960)
chr1 (15-101)||(34528745-34528831)
chr1 (8-110)||(44543279-44543380)
chr1 (8-101)||(23291626-23291719)
chr1 (175-228)||(26535284-26535337)
chr1 (22-82)||(34413088-34413148)
chr1 (17-100)||(18939336-18939418)
chr1 (10-101)||(27456555-27456646)
chr1 (8-63)||(34878262-34878317)
chr1 (8-75)||(36775694-36775761)
chr1 (17-111)||(31692460-31692553)
chr1 (8-101)||(1742296-1742389)
chr1 (8-101)||(7836780-7836873)
chr1 (8-65)||(14872690-14872747)
chr1 (10-99)||(45789558-45789647)
chr1 (8-100)||(3228285-3228377)
chr1 (8-88)||(5983864-5983944)
chr1 (10-62)||(39888236-39888288)
chr1 (17-155)||(19060870-19061008)
chr1 (8-47)||(28053700-28053739)
chr1 (179-217)||(1742181-1742219)
chr1 (8-101)||(10776445-10776538)
chr1 (179-208)||(12635076-12635105)
chr1 (179-216)||(23291796-23291833)
chr1 (175-216)||(27456443-27456484)
chr1 (19-84)||(30506167-30506232)
chr1 (17-102)||(40163422-40163507)
chr1 (179-223)||(8212063-8212107)
chr1 (51-111)||(9687199-9687259)
chr1 (8-40)||(15431650-15431682)
chr1 (182-214)||(34413247-34413279)
chr1 (8-76)||(37720133-37720201)
chr1 (42-86)||(40163515-40163559)
chr1 (182-214)||(48750092-48750124)
[»] chr3 (46 HSPs)
chr3 (8-89)||(26716091-26716172)
chr3 (17-151)||(35175364-35175499)
chr3 (7-101)||(19339187-19339281)
chr3 (8-111)||(21289798-21289905)
chr3 (17-154)||(29239300-29239438)
chr3 (8-82)||(51303627-51303701)
chr3 (17-101)||(4821818-4821902)
chr3 (8-96)||(14859506-14859594)
chr3 (7-101)||(20464953-20465047)
chr3 (8-101)||(33579891-33579984)
chr3 (8-155)||(38545758-38545903)
chr3 (17-89)||(628916-628987)
chr3 (8-76)||(8914748-8914816)
chr3 (8-100)||(21313048-21313140)
chr3 (12-88)||(32246471-32246547)
chr3 (17-89)||(48199800-48199872)
chr3 (8-63)||(53099839-53099894)
chr3 (25-107)||(4396335-4396417)
chr3 (8-82)||(51923757-51923831)
chr3 (8-86)||(53508252-53508330)
chr3 (8-110)||(53807842-53807943)
chr3 (8-101)||(18011031-18011124)
chr3 (19-88)||(27856188-27856257)
chr3 (51-111)||(31794090-31794150)
chr3 (179-215)||(33579767-33579803)
chr3 (17-101)||(35864925-35865009)
chr3 (8-88)||(46304504-46304584)
chr3 (8-63)||(47042032-47042087)
chr3 (8-110)||(2208838-2208939)
chr3 (179-209)||(2342420-2342450)
chr3 (8-82)||(7546645-7546719)
chr3 (176-206)||(22290846-22290876)
chr3 (8-82)||(27706210-27706284)
chr3 (183-217)||(36461588-36461622)
chr3 (43-88)||(38142558-38142604)
chr3 (8-86)||(45424824-45424902)
chr3 (179-217)||(47042205-47042243)
chr3 (44-110)||(52496929-52496995)
chr3 (8-45)||(23799894-23799931)
chr3 (179-228)||(53808019-53808068)
chr3 (7-63)||(6954679-6954735)
chr3 (8-101)||(7887427-7887522)
chr3 (8-40)||(32701563-32701595)
chr3 (17-101)||(37040780-37040864)
chr3 (179-215)||(47896051-47896087)
chr3 (179-215)||(53508120-53508156)
[»] chr7 (38 HSPs)
chr7 (17-101)||(38880571-38880655)
chr7 (8-154)||(28476183-28476334)
chr7 (8-154)||(22742900-22743051)
chr7 (8-101)||(37837442-37837535)
chr7 (20-88)||(22087344-22087412)
chr7 (10-101)||(5348578-5348669)
chr7 (8-101)||(45349783-45349876)
chr7 (8-76)||(35132986-35133054)
chr7 (17-76)||(1749140-1749199)
chr7 (8-63)||(9977190-9977245)
chr7 (8-154)||(24350823-24350972)
chr7 (19-101)||(26623784-26623867)
chr7 (8-63)||(38798833-38798888)
chr7 (8-63)||(39328774-39328829)
chr7 (8-154)||(44311776-44311922)
chr7 (11-101)||(4530090-4530180)
chr7 (7-101)||(19404740-19404834)
chr7 (8-101)||(31482082-31482172)
chr7 (8-88)||(24770273-24770353)
chr7 (10-74)||(39229055-39229119)
chr7 (183-217)||(9450294-9450328)
chr7 (182-228)||(19404911-19404957)
chr7 (17-111)||(24069387-24069481)
chr7 (182-228)||(24351000-24351046)
chr7 (183-217)||(30756976-30757010)
chr7 (175-217)||(37837608-37837650)
chr7 (179-217)||(42978509-42978547)
chr7 (182-223)||(1749300-1749341)
chr7 (179-216)||(24770155-24770192)
chr7 (7-100)||(25287169-25287262)
chr7 (8-101)||(47590325-47590418)
chr7 (8-88)||(11343837-11343917)
chr7 (182-214)||(22742840-22742872)
chr7 (175-215)||(25287335-25287375)
chr7 (11-101)||(27997105-27997192)
chr7 (182-214)||(28476123-28476155)
chr7 (17-101)||(46700049-46700133)
chr7 (182-214)||(48930682-48930714)
[»] chr2 (49 HSPs)
chr2 (8-100)||(30400020-30400112)
chr2 (10-101)||(17151445-17151536)
chr2 (10-101)||(28871775-28871866)
chr2 (8-101)||(41327525-41327618)
chr2 (8-155)||(32448604-32448751)
chr2 (8-111)||(28533939-28534042)
chr2 (17-111)||(29574622-29574716)
chr2 (8-88)||(36175481-36175561)
chr2 (17-84)||(12554175-12554242)
chr2 (8-111)||(17249132-17249234)
chr2 (8-111)||(23933604-23933707)
chr2 (11-154)||(3308909-3309057)
chr2 (7-101)||(4264494-4264588)
chr2 (7-101)||(6436629-6436723)
chr2 (22-112)||(11812694-11812784)
chr2 (8-101)||(25509053-25509146)
chr2 (8-76)||(10237201-10237269)
chr2 (8-88)||(31128765-31128845)
chr2 (8-63)||(1415617-1415672)
chr2 (17-88)||(10929700-10929771)
chr2 (17-88)||(33760187-33760258)
chr2 (8-66)||(12677435-12677493)
chr2 (20-72)||(10792862-10792914)
chr2 (8-60)||(41694684-41694736)
chr2 (178-209)||(4192774-4192805)
chr2 (8-63)||(19028899-19028954)
chr2 (22-101)||(19597901-19597980)
chr2 (8-63)||(33923765-33923820)
chr2 (8-63)||(35220385-35220440)
chr2 (42-101)||(37994301-37994360)
chr2 (27-101)||(4904149-4904223)
chr2 (8-82)||(14955570-14955644)
chr2 (17-87)||(24461479-24461549)
chr2 (179-217)||(43397274-43397312)
chr2 (179-216)||(12648078-12648115)
chr2 (8-101)||(14423347-14423440)
chr2 (179-216)||(28227839-28227876)
chr2 (179-216)||(29279724-29279761)
chr2 (179-216)||(31128933-31128970)
chr2 (8-101)||(36691896-36691989)
chr2 (17-66)||(42698695-42698744)
chr2 (16-60)||(7646536-7646580)
chr2 (182-214)||(10237370-10237402)
chr2 (8-76)||(18763515-18763583)
chr2 (8-60)||(19062337-19062389)
chr2 (179-215)||(29574787-29574823)
chr2 (183-215)||(31788366-31788398)
chr2 (7-111)||(34128668-34128772)
chr2 (51-111)||(34599013-34599073)
[»] chr8 (42 HSPs)
chr8 (8-111)||(5333433-5333536)
chr8 (8-111)||(15344313-15344415)
chr8 (8-111)||(15433378-15433480)
chr8 (8-111)||(15524682-15524784)
chr8 (8-154)||(41896473-41896624)
chr8 (10-101)||(33347505-33347595)
chr8 (19-111)||(1236690-1236781)
chr8 (19-111)||(1239390-1239481)
chr8 (8-76)||(18890681-18890749)
chr8 (29-101)||(41060252-41060324)
chr8 (8-153)||(45445793-45445936)
chr8 (8-111)||(29617256-29617359)
chr8 (7-62)||(42046274-42046329)
chr8 (7-101)||(16247204-16247298)
chr8 (7-76)||(18847120-18847189)
chr8 (8-112)||(8981166-8981270)
chr8 (8-154)||(20227263-20227409)
chr8 (17-60)||(28086804-28086847)
chr8 (8-154)||(39657410-39657561)
chr8 (8-76)||(27498347-27498414)
chr8 (11-88)||(34609860-34609940)
chr8 (8-63)||(33214653-33214708)
chr8 (14-101)||(36948425-36948512)
chr8 (17-111)||(8443502-8443596)
chr8 (182-216)||(14585600-14585634)
chr8 (183-217)||(20553401-20553435)
chr8 (183-217)||(20559901-20559935)
chr8 (183-217)||(20571463-20571497)
chr8 (179-209)||(26469348-26469378)
chr8 (175-217)||(33214779-33214821)
chr8 (183-217)||(37971192-37971226)
chr8 (183-225)||(41896402-41896444)
chr8 (8-101)||(471148-471241)
chr8 (179-216)||(14545053-14545090)
chr8 (8-101)||(17693596-17693689)
chr8 (42-154)||(24099271-24099384)
chr8 (179-208)||(40619224-40619253)
chr8 (8-88)||(3673468-3673548)
chr8 (17-101)||(5046767-5046851)
chr8 (8-76)||(14585716-14585784)
chr8 (17-101)||(14916178-14916262)
chr8 (8-76)||(26469128-26469196)
[»] chr5 (33 HSPs)
chr5 (7-154)||(19103450-19103602)
chr5 (8-111)||(8088196-8088298)
chr5 (10-101)||(41749337-41749428)
chr5 (17-101)||(37986106-37986190)
chr5 (8-94)||(6216916-6217002)
chr5 (8-101)||(19120924-19121016)
chr5 (8-154)||(28540890-28541041)
chr5 (7-63)||(13421982-13422038)
chr5 (8-88)||(26878092-26878172)
chr5 (8-100)||(31391737-31391829)
chr5 (8-76)||(41630538-41630606)
chr5 (8-82)||(2979290-2979364)
chr5 (8-82)||(14211257-14211331)
chr5 (8-61)||(39567321-39567374)
chr5 (8-76)||(10722797-10722865)
chr5 (17-101)||(11976928-11977012)
chr5 (8-88)||(25980182-25980262)
chr5 (16-88)||(31315932-31316004)
chr5 (8-63)||(35850848-35850903)
chr5 (179-217)||(8096651-8096689)
chr5 (15-140)||(10332539-10332665)
chr5 (179-217)||(11977090-11977128)
chr5 (7-40)||(1409570-1409603)
chr5 (179-216)||(7036126-7036163)
chr5 (50-111)||(28235609-28235670)
chr5 (182-214)||(2979469-2979501)
chr5 (179-215)||(4771039-4771075)
chr5 (182-214)||(14211130-14211162)
chr5 (8-76)||(15571522-15571590)
chr5 (183-215)||(24229942-24229974)
chr5 (182-214)||(28541069-28541101)
chr5 (17-101)||(35920989-35921073)
chr5 (182-214)||(39567195-39567227)
[»] chr6 (29 HSPs)
chr6 (17-111)||(26588465-26588559)
chr6 (17-110)||(679113-679206)
chr6 (8-101)||(6957163-6957256)
chr6 (8-81)||(29255430-29255503)
chr6 (17-101)||(11321462-11321546)
chr6 (8-76)||(14801865-14801933)
chr6 (8-111)||(528334-528437)
chr6 (8-82)||(546062-546137)
chr6 (8-111)||(31296823-31296926)
chr6 (8-62)||(8102778-8102832)
chr6 (17-62)||(23128670-23128715)
chr6 (8-101)||(34018573-34018666)
chr6 (175-215)||(11321618-11321658)
chr6 (8-63)||(127720-127775)
chr6 (17-111)||(22571477-22571572)
chr6 (8-111)||(30493535-30493638)
chr6 (11-62)||(30776715-30776766)
chr6 (179-209)||(4984694-4984724)
chr6 (179-209)||(9508832-9508862)
chr6 (12-66)||(20225899-20225953)
chr6 (12-66)||(22119883-22119937)
chr6 (8-62)||(30894652-30894706)
chr6 (19-155)||(28981135-28981272)
chr6 (8-101)||(34185677-34185770)
chr6 (8-40)||(7515186-7515218)
chr6 (51-111)||(12652966-12653026)
chr6 (51-111)||(23947313-23947373)
chr6 (179-223)||(28981069-28981113)
chr6 (179-223)||(30608667-30608711)
[»] scaffold0445 (1 HSPs)
scaffold0445 (8-101)||(1356-1449)
[»] scaffold0009 (2 HSPs)
scaffold0009 (8-100)||(58072-58164)
scaffold0009 (179-228)||(58233-58282)
[»] scaffold0262 (1 HSPs)
scaffold0262 (17-88)||(1812-1883)
[»] scaffold0128 (1 HSPs)
scaffold0128 (7-44)||(36894-36931)
[»] scaffold0042 (1 HSPs)
scaffold0042 (8-101)||(92480-92573)
[»] scaffold0888 (2 HSPs)
scaffold0888 (17-76)||(1671-1730)
scaffold0888 (182-214)||(1831-1863)
[»] scaffold0347 (1 HSPs)
scaffold0347 (17-156)||(5986-6126)


Alignment Details
Target: chr4 (Bit Score: 126; Significance: 4e-65; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 4937965 - 4937750
Alignment:
Q  1 ccgtaaattgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 100  Q
    ||||| |||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4937965 ccgtatattgacgcctaaatcattgattgaatttataatcgactgaagttgatctttcaataaaaatcaaacgaactccgcaacaagatgtaaaatcaaa 4937866  T
Q  101 ctacgccgcactaacgacatacaagacaacgtggtactcagacgaagaaatcacacnnnnnnnnnnnnnnnnnncttaatatatgtgaaaatcacttatt 200  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||||||||||                  |||||||||| |||||||||||||||    
T  4937865 caacgccgcactaacgacatacaagacaacgtcgtactcagacgaagaaatcacacaaaacaaaaaagaaaaaacttaatatatatgaaaatcacttatt 4937766  T
Q  201 tagattgaacgaaaag 216  Q
    ||||||||||||||||    
T  4937765 tagattgaacgaaaag 4937750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 9048789 - 9048644
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||||  |||||||||||||||||||| ||||||||||||| ||||||||| ||||| ||||||||| |||||||||||    |||||| || |||||    
T  9048789 ttgacgctcaaatcattgattgaatttgtgattaactgaagcttatctttcaaaagaaaccaaacgaacaccgcaacaagacccgaaatcagacaacgcc 9048690  T
Q  108 gcacta-acgacatacaagacaacgtggtactcagacgaagaaatca 153  Q
    |||| | |||||| |||||| ||||  | ||||||||||| ||||||    
T  9048689 gcacaagacgacaaacaaga-aacgccgcactcagacgaaaaaatca 9048644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 52944436 - 52944333
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||| | ||||||| |||||||| ||| ||| |||||||||||||||||||||  || ||||||||| ||||||||||| | ||||| |||| |||||    
T  52944436 ttgacgtccaaatcatcgattgaatctgtgattgactgaagctgatctttcaatatgaaacaaacgaacaccgcaacaagacgcaaaattaaacaacgcc 52944337  T
Q  108 gcac 111  Q
    ||||    
T  52944336 gcac 52944333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 52060910 - 52060987
Alignment:
Q  11 acgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 88  Q
    ||||| |||||||||||||||| ||||||| ||||||| |||||||||||||| ||| |||||||| || ||||||||    
T  52060910 acgcccaaatcattgattgaatctgtaattgactgaagttgatctttcaataggaattaaacgaacacctcaacaaga 52060987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 9714037 - 9713934
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||||| ||||| |||||||||||||| |||   ||||||||||||| |||||  ||  |||||||||||||||||| |||| ||||||||| ||| |    
T  9714037 ttgacgcccaaatcgttgattgaatttgtgattgtttgaagctgatcttccaatatgaaagaaacgaactccgcaacaatatgtgaaatcaaacaacgtc 9713938  T
Q  108 gcac 111  Q
    ||||    
T  9713937 gcac 9713934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 10496460 - 10496367
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||| ||||||||| |||||||||||||| ||||| || ||||||||||||| ||  |||||||| | || |||||| | ||||||||||    
T  10496460 ttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaataggaactaaacgaacactgcgacaagacgcaaaatcaaac 10496367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 51888204 - 51888297
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgca 110  Q
    |||||||||||| ||||||| ||| | ||||| |||||||||||||  || ||||||||| |||||||||||||  ||||||||| ||| ||||    
T  51888204 aaatcattgattaaatttgtgattgattgaagttgatctttcaatatgaaccaaacgaacaccgcaacaagatgcgaaatcaaacaacgtcgca 51888297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 18138908 - 18138968
Alignment:
Q  51 gatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    ||||||||||||||||||||| |||| | ||||||||||| |||||||||| |||||||||    
T  18138908 gatctttcaatagaaatcaaatgaacactgcaacaagatggaaaatcaaacaacgccgcac 18138968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 49126121 - 49126181
Alignment:
Q  51 gatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    ||||||||||||||||||||| |||| | ||||||||||| |||||||||| |||||||||    
T  49126121 gatctttcaatagaaatcaaatgaacactgcaacaagatggaaaatcaaacaacgccgcac 49126181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 8670610 - 8670531
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaag 87  Q
    |||||||| ||||||||| |||||||||||||| ||||| || ||||||||||||| ||  |||||||| |||| |||||    
T  8670610 ttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaataggaaataaacgaacaccgcgacaag 8670531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 17949318 - 17949453
Alignment:
Q  18 aatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcacta-acg 116  Q
    |||||||| |||||||||||||| ||||| |  ||||||||||||| ||| |||||||| |||| |||| | | ||||||||   ||||||||| | |||    
T  17949318 aatcattggttgaatttgtaattgactgatgtagatctttcaataggaattaaacgaacaccgcgacaaaacgcaaaatcaa---acgccgcacaacacg 17949414  T
Q  117 acatacaagacaacgtggtactcagacgaagaaatcaca 155  Q
    ||| |||| ||||||  | ||| |||||| |||||||||    
T  17949415 acaaacaacacaacgccgcacttagacgacgaaatcaca 17949453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 17953170 - 17953305
Alignment:
Q  18 aatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcacta-acg 116  Q
    |||||||| |||||||||||||| ||||| |  ||||||||||||| ||| |||||||| |||| |||| | | ||||||||   ||||||||| | |||    
T  17953170 aatcattggttgaatttgtaattgactgatgtagatctttcaataggaattaaacgaacaccgcgacaaaacgcaaaatcaa---acgccgcacaacacg 17953266  T
Q  117 acatacaagacaacgtggtactcagacgaagaaatcaca 155  Q
    ||| |||| ||||||  | ||| |||||| |||||||||    
T  17953267 acaaacaacacaacgccgcacttagacgacgaaatcaca 17953305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 53444244 - 53444188
Alignment:
Q  7 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 63  Q
    ||||||||| ||||||||| |||||||||||||| ||||| || |||||||||||||    
T  53444244 attgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaatag 53444188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 7393354 - 7393303
Alignment:
Q  50 tgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||||||||| |||||||||||| || ||||||||||| |||||||||    
T  7393354 tgatctttcaataggaatcaaacgaacaccacaacaagatgtgaaatcaaac 7393303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 52944266 - 52944219
Alignment:
Q  180 tatatgtgaaaatcacttatttagattgaacgaaaaggacaaaatgat 227  Q
    |||||||||||||||||||||||||||||| |||||||  ||||||||    
T  52944266 tatatgtgaaaatcacttatttagattgaaagaaaagggaaaaatgat 52944219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 18048991 - 18048909
Alignment:
Q  25 gattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||||| | | ||| ||||||||| |||||||||||  |||||||||||| ||||||||||  | |||||||||| |||||    
T  18048991 gattgaatctatgattgactgaagcttatctttcaatatgaatcaaacgaacaccgcaacaaggcgcaaaatcaaacaacgcc 18048909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 28857518 - 28857424
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    |||||||  ||||||| ||| ||| |||||||||||||||||||||  || ||||||||| ||||||| ||| |   |||||||| |||||||||    
T  28857518 aaatcatcaattgaatatgtgattgactgaagctgatctttcaatatgaaacaaacgaacaccgcaactagacgcggaatcaaacaacgccgcac 28857424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 33332553 - 33332658
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccg--caacaagatgtaaaatcaaactacg 105  Q
    |||||| | |||||||||||||||| ||| |||  |||||| ||||||||||||| |||  |||||||| |||  ||||||||||  ||||||||| |||    
T  33332553 ttgacgtccaaatcattgattgaatctgtgattgtctgaagttgatctttcaataaaaacgaaacgaacaccgcacaacaagatgcgaaatcaaacaacg 33332652  T
Q  106 ccgcac 111  Q
     |||||    
T  33332653 tcgcac 33332658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 36161827 - 36161733
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    |||||||||||||||| ||| ||| |||||| || ||||||| |||  ||  |||||||| ||||||||| | |||||||||||| ||| |||||    
T  36161827 aaatcattgattgaatatgtgattgactgaaactaatctttcgatatgaacaaaacgaacaccgcaacaaaacgtaaaatcaaacaacgacgcac 36161733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 21662562 - 21662469
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||  ||||||||||||| |||||||||| ||||| | |||||||||||||| ||  |||||||  |||| |||||| |  |||||||||    
T  21662562 ttgacgctcaaatcattgattggatttgtaattgactgatgttgatctttcaataggaactaaacgaataccgcgacaagacgcgaaatcaaac 21662469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 21671326 - 21671233
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||  ||||||||||||| |||||||||| ||||| | |||||||||||||| ||  |||||||  |||| |||||| |  |||||||||    
T  21671326 ttgacgctcaaatcattgattggatttgtaattgactgatgttgatctttcaataggaactaaacgaataccgcgacaagacgcgaaatcaaac 21671233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 27652060 - 27651995
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 82  Q
    |||||||||||||||||||| |||  || |||||||||||||||||  || ||||||||| |||||    
T  27652060 aaatcattgattgaatttgtgattgtctaaagctgatctttcaatacgaaccaaacgaacaccgca 27651995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 36194825 - 36194760
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 82  Q
    |||||||||||||||||||| |||   |||||||||||||||||||  || ||||||||| |||||    
T  36194825 aaatcattgattgaatttgtgattgtttgaagctgatctttcaatacgaaccaaacgaacaccgca 36194760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 9643504 - 9643420
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||| ||||||| ||| ||| ||||||| |||||||| ||||  || ||||||||| | |||||||||||  |||||||||    
T  9643504 aaatcattaattgaatatgtgattgactgaagttgatcttttaatatgaaccaaacgaacactgcaacaagatgagaaatcaaac 9643420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 38166223 - 38166306
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    ||||||||| |||||| | | ||||||| ||| ||||||||||||| ||||||||| ||| || ||| ||||||| |||||||||    
T  38166223 aaatcattgcttgaatctatgattaact-aagttgatctttcaatataaatcaaacaaacaccacaataagatgtgaaatcaaac 38166306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 48351179 - 48351263
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    ||||||| | |||||| ||| ||| ||||||||||||||||||||| ||| ||||||||| |||  |||||| |  |||||||||    
T  48351179 aaatcataggttgaatatgtgattgactgaagctgatctttcaatataaaccaaacgaacaccgtgacaagacgcgaaatcaaac 48351263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 12199686 - 12199769
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 100  Q
    ||||| |||||||||| ||||| | ||||||| |||| ||||||||  ||  |||||||| ||||||||||| | |||||||||    
T  12199686 aaatctttgattgaatctgtaactgactgaagttgatatttcaatatgaactaaacgaacaccgcaacaagacgcaaaatcaaa 12199769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 54021976 - 54021905
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 88  Q
    |||||||||||| ||||||||||| ||||| |  ||||||||||||| ||  |||||||| |||| ||||||    
T  54021976 aaatcattgattcaatttgtaattgactgatgtcgatctttcaataggaactaaacgaacaccgcgacaaga 54021905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 2520729 - 2520695
Alignment:
Q  183 atgtgaaaatcacttatttagattgaacgaaaagg 217  Q
    ||||||||| |||||||||||||||||||||||||    
T  2520729 atgtgaaaaccacttatttagattgaacgaaaagg 2520695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 24099227 - 24099261
Alignment:
Q  183 atgtgaaaatcacttatttagattgaacgaaaagg 217  Q
    ||||||||||||||||||||||||||| |||||||    
T  24099227 atgtgaaaatcacttatttagattgaaagaaaagg 24099261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 209
Target Start/End: Original strand, 37188708 - 37188738
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaa 209  Q
    |||||||||||||||||||||||||||||||    
T  37188708 atatatgtgaaaatcacttatttagattgaa 37188738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 209
Target Start/End: Complemental strand, 43444366 - 43444336
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaa 209  Q
    |||||||||||||||||||||||||||||||    
T  43444366 atatatgtgaaaatcacttatttagattgaa 43444336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 209
Target Start/End: Complemental strand, 52978780 - 52978750
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaa 209  Q
    |||||||||||||||||||||||||||||||    
T  52978780 atatatgtgaaaatcacttatttagattgaa 52978750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 1621491 - 1621556
Alignment:
Q  11 acgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 76  Q
    ||||| |||||||||||||||||| | |||   |||||||||||||||||||  || |||||||||    
T  1621491 acgcccaaatcattgattgaatttatgattgtttgaagctgatctttcaatacgaaccaaacgaac 1621556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 3336152 - 3336201
Alignment:
Q  52 atctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||||||  ||||||| |||| ||||||||||||| ||||||||||    
T  3336152 atctttcaatatgaatcaaatgaacaccgcaacaagatggaaaatcaaac 3336201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 6155217 - 6155278
Alignment:
Q  15 ctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 76  Q
    ||||||||| |||||||  ||| ||| |||||| ||||||||||||||  ||||||||||||    
T  6155217 ctaaatcatcgattgaacatgtgattgactgaaactgatctttcaatatgaatcaaacgaac 6155278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 43095586 - 43095549
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaag 216  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  43095586 atatatgtgaaaaccacttatttagattgaaagaaaag 43095549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 54021817 - 54021780
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaag 216  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  54021817 atatatgtgaaaaccacttatttagattgaaagaaaag 54021780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 56156626 - 56156719
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    ||||||||  |||||||| |||||||||||||| ||||| | | ||||||||| || ||  |||||||| |||| |||||| |  |||||||||    
T  56156626 ttgacgccccaatcattggttgaatttgtaattgactgatgttaatctttcaagaggaactaaacgaacaccgcgacaagacgcgaaatcaaac 56156719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 1621654 - 1621686
Alignment:
Q  182 tatgtgaaaatcacttatttagattgaacgaaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  1621654 tatgtgaaaatcacttatttagattgaatgaaa 1621686  T

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Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 11299978 - 11300033
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaa 66  Q
    |||||||| ||||||||| |||||||||||||  |||   |||||||||||||||||||    
T  11299978 ttgacgcccaaatcattgtttgaatttgtaatcgact---gctgatctttcaatagaaa 11300033  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 27651900 - 27651868
Alignment:
Q  182 tatgtgaaaatcacttatttagattgaacgaaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  27651900 tatgtgaaaatcacttatttagattgaaagaaa 27651868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 32766640 - 32766584
Alignment:
Q  7 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 63  Q
    ||||||| | |||||||||||||||||||||||| ||||| |  ||||||| |||||    
T  32766640 attgacgtccaaatcattgattgaatttgtaattgactgatgtagatcttttaatag 32766584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 36204363 - 36204467
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaat-----taactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaact 102  Q
    |||||| | |||||||||||||||||||| ||     | |||||||||||| ||||||||  || |||| |||| ||||||||| |||  |||||||||     
T  36204363 ttgacgtccaaatcattgattgaatttgtgatgtgattgactgaagctgatttttcaatatgaaccaaatgaacaccgcaacaatatgcgaaatcaaaca 36204462  T
Q  103 acgcc 107  Q
    |||||    
T  36204463 acgcc 36204467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 37030377 - 37030293
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||||||||||| |||| || | ||||| ||||||||  ||||||| |||||| || |||| ||||||  | |||||||||    
T  37030377 aaatcattgattgaatctgtatttgattgaagttgatcttttgatagaaaccaaacgtacaccgcgacaagacatgaaatcaaac 37030293  T

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Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 1602198 - 1602096
Alignment:
Q  7 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgc 106  Q
    ||||| ||||||||||||||||||| |||||||| ||| |||  |||||||||||||||||||||||||| ||||||||||||| |||||||||| |||     
T  1602198 attgatgcctaaatcattgattgaaattgtaattgact-aagtcgatctttcaatagaaatcaaacgaacgccgcaacaagatgcaaaatcaaacaacgt 1602100  T
Q  107 cgca 110  Q
    ||||    
T  1602099 cgca 1602096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 49627021 - 49626919
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||| | |||||||||||||||||||| ||| |||||||||||||||||||||  || | ||||||| |||||||||||||| ||||||||| |||||    
T  49627021 ttgacgtccaaatcattgattgaatttgtgattgactgaagctgatctttcaatatgaa-ccaacgaacaccgcaacaagatgtcaaatcaaacaacgcc 49626923  T
Q  108 gcac 111  Q
    ||||    
T  49626922 gcac 49626919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 24583058 - 24582956
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||| | |||||||||||||||| ||| ||| |||||||||||||||||||||  || | ||||||| |||||||||||||  ||||||||| |||||    
T  24583058 ttgacgtccaaatcattgattgaatctgtgattgactgaagctgatctttcaatatgaa-ccaacgaacaccgcaacaagatgccaaatcaaacaacgcc 24582960  T
Q  108 gcac 111  Q
    ||||    
T  24582959 gcac 24582956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 47133011 - 47132908
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||| | ||||||| |||||||| ||| ||| |||||||||||||||||||||  || ||||||||| ||||||||||| |  |||| |||| |||||    
T  47133011 ttgacgtccaaatcatcgattgaatctgtgattgactgaagctgatctttcaatatgaagcaaacgaacaccgcaacaagacgcgaaattaaacaacgcc 47132912  T
Q  108 gcac 111  Q
    ||||    
T  47132911 gcac 47132908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 16161946 - 16161795
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca----acaagatgtaaaatcaaacta 103  Q
    |||||||| |||||||||| ||||||||| |||  || |||||||||||||||||  || ||||||||| |||||    | ||||||| ||||||||| |    
T  16161946 ttgacgcccaaatcattgaatgaatttgtgattgtcttaagctgatctttcaatacgaaccaaacgaacaccgcacaacaaaagatgtgaaatcaaacaa 16161847  T
Q  104 cgccgcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 154  Q
    |||||||| | |||||  |||| ||||||| | ||| |||||| ||||||||    
T  16161846 cgccgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcac 16161795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 48750293 - 48750219
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 82  Q
    |||||||| |||||||||||| ||||||| |||  ||||||||||||||||||||  |||||||||||| |||||    
T  48750293 ttgacgcccaaatcattgattaaatttgtgattgtctgaagctgatctttcaatacgaatcaaacgaacaccgca 48750219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 44915748 - 44915655
Alignment:
Q  7 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 100  Q
    ||||||||| |||||||||||||||||||||||| ||||| | |||||||||||||  ||  |||||||| |||| |||| | | |||||||||    
T  44915748 attgacgcccaaatcattgattgaatttgtaattgactgatgttgatctttcaatatgaactaaacgaacaccgcgacaaaacgcaaaatcaaa 44915655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 27580112 - 27580204
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 100  Q
    |||||||| |||||||| ||||||||||||||| |||||||  ||||||||||||| ||  ||| |||| |||| |||||| | |||||||||    
T  27580112 ttgacgcccaaatcatttattgaatttgtaatttactgaagtcgatctttcaataggaactaaatgaacaccgcgacaagacgcaaaatcaaa 27580204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 6217820 - 6217914
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||| | | |||||||||  |  ||||||| | |||||||||| ||| |||||    
T  6217820 aaatcattgattgaatttgtgattgactgaagttgatctttcaatatataccaaacgaacaacataacaagacgcaaaatcaaacaacgtcgcac 6217914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 12635269 - 12635175
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    |||||||||||||||||||| ||| ||| ||| |||||||||||||  || |||| |||| || | |||| | |||||||||||| |||||||||    
T  12635269 aaatcattgattgaatttgtgatttactaaagttgatctttcaatatgaaccaaatgaacaccactacaaaacgtaaaatcaaacaacgccgcac 12635175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 16262960 - 16262866
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    |||||||||||||||| ||| ||| |||| || |||| ||||||||  |||||||||||| || |||||||| |  ||||||||| |||||||||    
T  16262960 aaatcattgattgaatatgtgattgactgcagttgatttttcaatatgaatcaaacgaacaccacaacaagacgcgaaatcaaacaacgccgcac 16262866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 34528831 - 34528745
Alignment:
Q  15 ctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||||||||||||| ||| ||| ||||||| ||||||||||||| ||| ||||  ||| ||| |||||||||  |||||||||    
T  34528831 ctaaatcattgattgaatctgtgattgactgaagttgatctttcaatataaaccaaagaaacaccgaaacaagatgcgaaatcaaac 34528745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 44543380 - 44543279
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||| | |||||||||||||||| ||| ||| ||| |||||||||||||||||  || | ||||||| |||||| ||||||  ||||||||| |||||    
T  44543380 ttgacgtccaaatcattgattgaatctgtgattgactaaagctgatctttcaatatgaa-ccaacgaacaccgcaataagatgccaaatcaaacaacgcc 44543282  T
Q  108 gca 110  Q
    |||    
T  44543281 gca 44543279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 23291626 - 23291719
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||| ||| ||||||||| |||||||||||||| ||||| || ||||||||||||| ||  |||||||| |||| |||||| |  |||||||||    
T  23291626 ttgatgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaataggaaataaacgaacaccgcgacaagaagcgaaatcaaac 23291719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 26535337 - 26535284
Alignment:
Q  175 cttaatatatgtgaaaatcacttatttagattgaacgaaaaggacaaaatgatg 228  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| |||| ||||    
T  26535337 cttaatatatgtgaaaaccacttatttagattgaaagaaaaggagaaaaagatg 26535284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 34413088 - 34413148
Alignment:
Q  22 attgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 82  Q
    ||||||||||||||| |||  ||| |||||||||||||||| ||||||||||||| |||||    
T  34413088 attgattgaatttgtgattgtctggagctgatctttcaatacaaatcaaacgaacaccgca 34413148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 18939418 - 18939336
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 100  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||| ||| |||| |||| |||||||| || || ||||||||    
T  18939418 aaatcattgattaaatctgtaattgactgaagttgatctttcaata-aaaccaaatgaacaccgcaacaggacgtgaaatcaaa 18939336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 27456646 - 27456555
Alignment:
Q  10 gacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||| ||||||||||||||| |||||||| ||||| |  ||||||||||||| ||  |||||||| |||| |||||| |  |||||||||    
T  27456646 gacgcccaaatcattgattgaacttgtaattgactgatgtcgatctttcaataggaactaaacgaacaccgcgacaagacgcgaaatcaaac 27456555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 34878262 - 34878317
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 63  Q
    |||||||| ||||||||| |||||||||||||| ||||| || |||||||||||||    
T  34878262 ttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaatag 34878317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 36775694 - 36775761
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaa 75  Q
    |||||||| |||||||||||||||||||| |||  ||||||| ||||||||||||  || ||||||||    
T  36775694 ttgacgcccaaatcattgattgaatttgtgattgtctgaagccgatctttcaatacgaaccaaacgaa 36775761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 31692460 - 31692553
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    |||||||||||| ||||||| ||| ||| ||||| |||||||||||  || | ||||||| ||||||||||| | |||||||||| || ||||||    
T  31692460 aaatcattgattaaatttgttattgactaaagctaatctttcaatatgaa-ccaacgaacaccgcaacaagaagcaaaatcaaacaacaccgcac 31692553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 1742389 - 1742296
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||| ||||||||| |||||||||||||| | ||| || ||||||||||||| ||  |||||||| || | |||||| |  |||||||||    
T  1742389 ttgacgcccaaatcattggttgaatttgtaattgattgatgccgatctttcaataggaaataaacgaacaccacgacaagacgcgaaatcaaac 1742296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 7836780 - 7836873
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||| ||||||||| |||||||||||||| ||||| |  |||||||| |||| ||  |||||||| |||| |||||| |  |||||||||    
T  7836780 ttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcgataggaaataaacgaacgccgcgacaagacgcgaaatcaaac 7836873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 14872747 - 14872690
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaa 65  Q
    |||||||| ||||||||| |||||||||||||| ||||| |  |||||||||||||||    
T  14872747 ttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcaatagaa 14872690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 45789647 - 45789558
Alignment:
Q  10 gacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaa 99  Q
    |||||| |||||||||||||||| ||||||| | | ||| |||| ||||||||| || ||||| |||  |||||||| | ||||||||||    
T  45789647 gacgcccaaatcattgattgaatctgtaattgattaaagttgatatttcaataggaaccaaacaaacatcgcaacaacacgtaaaatcaa 45789558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 3228377 - 3228285
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 100  Q
    |||||||| ||||||||||||| |||||||||| |||||    ||||||||||||| ||  |||| ||| |||| ||||||||  ||||||||    
T  3228377 ttgacgcccaaatcattgattgtatttgtaattgactgatatcgatctttcaataggaactaaacaaacaccgcgacaagatgcgaaatcaaa 3228285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 5983944 - 5983864
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 88  Q
    |||||||| ||||||||| |||||||||||||| ||||| |  ||||||||||||| ||  |||| ||| |||| ||||||    
T  5983944 ttgacgcccaaatcattggttgaatttgtaattgactgatgtagatctttcaataggaactaaacaaacaccgcgacaaga 5983864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 39888288 - 39888236
Alignment:
Q  10 gacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaata 62  Q
    |||||| ||||||||||||||| |||||||| |||||||  ||||||||||||    
T  39888288 gacgcccaaatcattgattgaagttgtaattgactgaagtcgatctttcaata 39888236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 155
Target Start/End: Complemental strand, 19061008 - 19060870
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcacta-ac 115  Q
    |||| ||||||||||  ||| ||| ||||||||| |||||||||||  || ||| ||||| | |||||||||||| ||||||||| ||||| ||| | ||    
T  19061008 aaattattgattgaacctgtgattgactgaagctaatctttcaatatgaaccaa-cgaacactgcaacaagatgtcaaatcaaacaacgccacacaagac 19060910  T
Q  116 gacatacaagacaacgtggtactcagacgaagaaatcaca 155  Q
    |||  |||| |||| || | ||| |||||| |||||||||    
T  19060909 gacgaacaacacaaggtcgcacttagacgacgaaatcaca 19060870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 28053700 - 28053739
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaa 47  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  28053700 ttgacgcctaaataattgattgaatttgtaattgactgaa 28053739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 1742219 - 1742181
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaagg 217  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  1742219 atatatgtgaaaaccacttatttagattgaaagaaaagg 1742181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 10776445 - 10776538
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||| | ||||||||||||| |||||||||| ||||| |  |||||||||| || ||  |||||||| |||| |||||| | | ||||||||    
T  10776445 ttgacgtccaaatcattgattggatttgtaattgactgatgtcgatctttcaaaaggaagtaaacgaacaccgcgacaagacgcacaatcaaac 10776538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 208
Target Start/End: Complemental strand, 12635105 - 12635076
Alignment:
Q  179 atatatgtgaaaatcacttatttagattga 208  Q
    ||||||||||||||||||||||||||||||    
T  12635105 atatatgtgaaaatcacttatttagattga 12635076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 23291796 - 23291833
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaag 216  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  23291796 atatatgtgaaaaccacttatttagattgaaagaaaag 23291833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 27456484 - 27456443
Alignment:
Q  175 cttaatatatgtgaaaatcacttatttagattgaacgaaaag 216  Q
    ||||||||||| ||||| ||||||||||||||||| ||||||    
T  27456484 cttaatatatgcgaaaaccacttatttagattgaaagaaaag 27456443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 30506167 - 30506232
Alignment:
Q  19 atcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaac 84  Q
    |||||||||||||| || |||| | | |||| ||||||||||||| || ||||||||| |||||||    
T  30506167 atcattgattgaatctgcaattgattcaagccgatctttcaataggaagcaaacgaacaccgcaac 30506232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 40163422 - 40163507
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaact 102  Q
    |||||||||||| ||||| |  || ||||||||||||||| ||||||||| ||||| ||| || ||| |||| |  ||||||||||    
T  40163422 aaatcattgattaaatttttgtttgactgaagctgatcttgcaatagaaaccaaacaaacaccacaataagaggcgaaatcaaact 40163507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 8212063 - 8212107
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaaggacaaaa 223  Q
    ||||||||||||| |||||||||||||| || |||||||| ||||    
T  8212063 atatatgtgaaaaccacttatttagatttaaagaaaaggaaaaaa 8212107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 9687199 - 9687259
Alignment:
Q  51 gatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    ||||||||||||  ||||||| |||| |||||| ||||||  ||||||||| |||||||||    
T  9687199 gatctttcaatatgaatcaaatgaacaccgcaagaagatgggaaatcaaacaacgccgcac 9687259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 15431650 - 15431682
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaatt 40  Q
    |||||||| ||||||||||||||||||||||||    
T  15431650 ttgacgcccaaatcattgattgaatttgtaatt 15431682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 34413247 - 34413279
Alignment:
Q  182 tatgtgaaaatcacttatttagattgaacgaaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  34413247 tatgtgaaaatcacttatttagattgaaagaaa 34413279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 37720133 - 37720201
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 76  Q
    |||||||| |||||||| | ||||||||| |||  |||||| |||||||||||||  || |||||||||    
T  37720133 ttgacgcccaaatcattaaatgaatttgtgattgtctgaagttgatctttcaatacgaaccaaacgaac 37720201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 40163515 - 40163559
Alignment:
Q  42 actgaagctgatctttcaatagaaatcaaacgaactccgcaacaa 86  Q
    ||||||||||||||| ||||||||| ||||| ||| |||||||||    
T  40163515 actgaagctgatcttccaatagaaaccaaacaaacaccgcaacaa 40163559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 48750124 - 48750092
Alignment:
Q  182 tatgtgaaaatcacttatttagattgaacgaaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  48750124 tatgtgaaaatcacttatttagattgaaagaaa 48750092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 26716091 - 26716172
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagat 89  Q
    |||||||| |||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  26716091 ttgacgccaaaatcattgattgaatttatgattgactgaagctaatctttcaatagaaatcaaacgaacaccgcaacaagat 26716172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 151
Target Start/End: Complemental strand, 35175499 - 35175364
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcacta-ac 115  Q
    |||||||||||||||| ||| ||| ||||||||||||||||||||| ||| ||||||||| |||||||||||  | ||||||||| |||| |||| | ||    
T  35175499 aaatcattgattgaatatgtgattgactgaagctgatctttcaatataaaccaaacgaacaccgcaacaagacatgaaatcaaacaacgctgcacaagac 35175400  T
Q  116 gacatacaagacaacgtggtactcagacgaagaaat 151  Q
    ||   |||| |||| || |||||||||||| |||||    
T  35175399 gatgaacaacacaatgtcgtactcagacgacgaaat 35175364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 19339281 - 19339187
Alignment:
Q  7 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||| ||||||||||||||||||||||||||| ||| ||| |||||||||||||| ||  |||||||| || | |||||| || |||| ||||    
T  19339281 attgacacctaaatcattgattgaatttgtaattgactaaagttgatctttcaataggaactaaacgaacgccacgacaagacgtgaaattaaac 19339187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 21289798 - 21289905
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca----acaagatgtaaaatcaaacta 103  Q
    ||||| || |||||||||||||||||||| |||  ||||||||||||||||||||  || ||||||||| |||||    | |||||| |||||||||| |    
T  21289798 ttgacaccaaaatcattgattgaatttgtgattgtctgaagctgatctttcaatacgaaccaaacgaacaccgcacaacaaaagatgcaaaatcaaacaa 21289897  T
Q  104 cgccgcac 111  Q
    ||||||||    
T  21289898 cgccgcac 21289905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 29239438 - 29239300
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcacta-ac 115  Q
    |||||||||||| ||| ||| ||| ||||||||||||||| |||||  || ||||||||| || |||||||| || |||||||||  |||||||| | ||    
T  29239438 aaatcattgattaaatctgtgattgactgaagctgatcttccaatacgaaccaaacgaacaccacaacaagacgtgaaatcaaacagcgccgcacaagac 29239339  T
Q  116 gacatacaagacaacgtggtactcagacgaagaaatcac 154  Q
    |||  |||| ||||||  | |||||||||| ||||||||    
T  29239338 gacgaacaacacaacgccgcactcagacgatgaaatcac 29239300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 51303627 - 51303701
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 82  Q
    |||||||| |||||||||||||||||||| |||  | |||||||||||||||||| ||| ||||||||| |||||    
T  51303627 ttgacgcccaaatcattgattgaatttgtgattgtcagaagctgatctttcaatacaaaccaaacgaacaccgca 51303701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 4821902 - 4821818
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    ||||||| |||||||| ||| ||| ||| |||||||||||||||||  || ||||||||| ||||||||||| | ||||||||||    
T  4821902 aaatcatggattgaatatgtgattgactcaagctgatctttcaatatgaaccaaacgaacaccgcaacaagacgcaaaatcaaac 4821818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 14859594 - 14859506
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaat 96  Q
    |||||| | |||||||||||||||| ||| ||| | |||||||||||||||||||  || |||| |||| ||||||||||||| |||||    
T  14859594 ttgacgtccaaatcattgattgaatatgtgattgattgaagctgatctttcaatatgaaccaaatgaacaccgcaacaagatgcaaaat 14859506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 20464953 - 20465047
Alignment:
Q  7 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    ||||||||| |||||||| ||||||||||||||| ||||||   ||||||||||||| | | ||| |||| |||| |||||| | ||||||||||    
T  20464953 attgacgcccaaatcatttattgaatttgtaattgactgaaatcgatctttcaataggatttaaatgaacaccgcgacaagacgcaaaatcaaac 20465047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 33579984 - 33579891
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaata-gaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||| ||||||||| |||||||||||||| ||||| |  |||||||||||| ||||| |||||||| |||| |||||| | ||||||||||    
T  33579984 ttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcaatatgaaat-aaacgaacaccgcgacaagacgcaaaatcaaac 33579891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 155
Target Start/End: Complemental strand, 38545903 - 38545758
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||||| ||||||||| |||||||||||||| ||||| |  ||||||||||| ||||  |||| ||| |||| |||||| |  |||||||   |||||    
T  38545903 ttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcaatggaaaataaacaaacaccgcgacaagacgcgaaatcaa---acgcc 38545807  T
Q  108 gcacta-acgacatacaagacaacgtggtactcagacgaagaaatcaca 155  Q
    |||| | |||||  |||| ||||||| ||||| |||||| |||||||||    
T  38545806 gcacaagacgacgaacaacacaacgtcgtacttagacgacgaaatcaca 38545758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 628916 - 628987
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagat 89  Q
    |||||||||||||||| ||| ||| |||||||||||||||||||||  || | ||||||| ||||||||||||    
T  628916 aaatcattgattgaatctgtgattgactgaagctgatctttcaatatgaa-ccaacgaacaccgcaacaagat 628987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 8914816 - 8914748
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 76  Q
    |||||||| |||||||||||||||||||| |||  |||||||| |||||||||||  || |||||||||    
T  8914816 ttgacgcccaaatcattgattgaatttgtgattgtctgaagctaatctttcaatacgaaccaaacgaac 8914748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 21313140 - 21313048
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 100  Q
    |||||| | |||||||||||||||||||||||| |||||  | ||| ||||||||||||  |||||||| |||| |||| | || ||||||||    
T  21313140 ttgacgtccaaatcattgattgaatttgtaattgactgataccgatatttcaatagaaactaaacgaacaccgcgacaaaacgtgaaatcaaa 21313048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 32246547 - 32246471
Alignment:
Q  12 cgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 88  Q
    |||| |||||||||||||||| ||| ||||||||||| |||||||||||||| || |||  ||||  ||||||||||    
T  32246547 cgcccaaatcattgattgaatatgtgattaactgaagttgatctttcaataggaaccaagtgaacagcgcaacaaga 32246471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 48199872 - 48199800
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagat 89  Q
    |||||||||||| ||||| ||||| | ||||| |||||||||||||| || ||||||||| || |||||||||    
T  48199872 aaatcattgattaaatttataattgattgaagttgatctttcaataggaaccaaacgaacaccacaacaagat 48199800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 53099894 - 53099839
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 63  Q
    |||||||| ||||||||||||||| |||||||| ||| | ||||||||||||||||    
T  53099894 ttgacgcccaaatcattgattgaacttgtaattgactcatgctgatctttcaatag 53099839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 4396335 - 4396417
Alignment:
Q  25 gattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||||| | | ||| ||||||||| |||||||||||  |||||||||||| ||||||||||  | |||||||||| |||||    
T  4396335 gattgaatctatgattgactgaagcttatctttcaatatgaatcaaacgaacaccgcaacaaggcgcaaaatcaaacaacgcc 4396417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 51923831 - 51923757
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 82  Q
    |||||| | |||||||||||||||||||  |||  ||||||||||||||||||||  || ||||||||| |||||    
T  51923831 ttgacgtccaaatcattgattgaatttgcgattgtctgaagctgatctttcaatacgaaccaaacgaacaccgca 51923757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 53508330 - 53508252
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaa 86  Q
    |||||| | |||||||||||||||| ||| |||||||| |  |||||||||||||| || ||||||||| | |||||||    
T  53508330 ttgacgtccaaatcattgattgaatctgtgattaactggatttgatctttcaataggaaccaaacgaacactgcaacaa 53508252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 53807842 - 53807943
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||| | |||||||||||||||| ||| ||| ||||||| |||||||||||||  || | ||||||| | |||||||||||  ||||||||| | |||    
T  53807842 ttgacgtccaaatcattgattgaatctgtgattgactgaagttgatctttcaatatgaa-ccaacgaacacagcaacaagatgccaaatcaaacaatgcc 53807940  T
Q  108 gca 110  Q
    |||    
T  53807941 gca 53807943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 18011124 - 18011031
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||| || | |||||||||| |||| ||| ||| |||  ||||||||||||||||  |||||||| |||  ||||||||| |||||||||    
T  18011124 ttgacgcccaagtgattgattgaaattgttattgactaaagtcgatctttcaatagaaactaaacgaacaccgtgacaagatgtgaaatcaaac 18011031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 27856257 - 27856188
Alignment:
Q  19 atcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 88  Q
    |||||||||||||||||| ||| ||||||| | |||||||||||| || ||||||| | ||||| |||||    
T  27856257 atcattgattgaatttgttatttactgaagttaatctttcaataggaaccaaacgagcaccgcatcaaga 27856188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 31794150 - 31794090
Alignment:
Q  51 gatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    ||||||||||||  ||||||| |||| ||||||||||||  |||||||||| |||||||||    
T  31794150 gatctttcaatatgaatcaaatgaacaccgcaacaagatagaaaatcaaacaacgccgcac 31794090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 33579803 - 33579767
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaa 215  Q
    ||||||||||||||||||||||||||||||| |||||    
T  33579803 atatatgtgaaaatcacttatttagattgaaagaaaa 33579767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 35864925 - 35865009
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||||||||||||||||||| | ||| |  ||||||||||||| ||  |||||||| |||| | |||| | ||||||||||    
T  35864925 aaatcattgattgaatttgtaattgattgatgtcgatctttcaataggaactaaacgaacaccgcgaaaagacgcaaaatcaaac 35865009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 46304504 - 46304584
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 88  Q
    |||||||||||||||||| |||||||||||||| ||||| |  ||| ||||||||| ||  |||| ||| |||| ||||||    
T  46304504 ttgacgcctaaatcattggttgaatttgtaattgactgatgtagatatttcaataggaactaaacaaacaccgcgacaaga 46304584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 47042032 - 47042087
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 63  Q
    |||||||| ||| ||||| |||||||||||| | ||||| ||||||||||||||||    
T  47042032 ttgacgcccaaaccattggttgaatttgtaactgactgatgctgatctttcaatag 47042087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 2208939 - 2208838
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    ||||| || ||||||||| |||||| | ||||| ||||||   | |||||||||||||||||||||||| || | |||||||| | |||||||| || ||    
T  2208939 ttgacacccaaatcattg-ttgaatatataattgactgaaatcggtctttcaatagaaatcaaacgaacaccacgacaagatggataatcaaacaacacc 2208841  T
Q  108 gca 110  Q
    |||    
T  2208840 gca 2208838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 209
Target Start/End: Complemental strand, 2342450 - 2342420
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaa 209  Q
    |||||||||||||||||||||||||||||||    
T  2342450 atatatgtgaaaatcacttatttagattgaa 2342420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 7546719 - 7546645
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 82  Q
    |||||||  |||||||||| ||||||||| |||  ||||| ||||||||||||||  || ||||||||| |||||    
T  7546719 ttgacgctcaaatcattgactgaatttgtgattgtctgaaactgatctttcaatacgaaccaaacgaacaccgca 7546645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 206
Target Start/End: Complemental strand, 22290876 - 22290846
Alignment:
Q  176 ttaatatatgtgaaaatcacttatttagatt 206  Q
    |||||||||||||||||||||||||||||||    
T  22290876 ttaatatatgtgaaaatcacttatttagatt 22290846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 27706210 - 27706284
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 82  Q
    |||||||| |||||||||||||||||||| |||     |||||||||||||||||  || ||||||||| |||||    
T  27706210 ttgacgccgaaatcattgattgaatttgtgattgttaaaagctgatctttcaatacgaaccaaacgaacaccgca 27706284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 36461588 - 36461622
Alignment:
Q  183 atgtgaaaatcacttatttagattgaacgaaaagg 217  Q
    ||||||||||||||||||||||||||| |||||||    
T  36461588 atgtgaaaatcacttatttagattgaaagaaaagg 36461622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 38142604 - 38142558
Alignment:
Q  43 ctgaagctgatcttt-caatagaaatcaaacgaactccgcaacaaga 88  Q
    ||||||||||||||| ||||||||||||||||||| |||||| ||||    
T  38142604 ctgaagctgatcttttcaatagaaatcaaacgaacaccgcaaaaaga 38142558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 45424902 - 45424824
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaa 86  Q
    |||||||| |||||||||||||||||||||||| || || |  ||| ||||||||| ||  |||| ||| |||||||||    
T  45424902 ttgacgcccaaatcattgattgaatttgtaattgaccgatgtcgatttttcaataggaactaaacaaacaccgcaacaa 45424824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 47042205 - 47042243
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaagg 217  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  47042205 atatatgtgaaaatcacttatttaaattgaaagaaaagg 47042243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 52496995 - 52496929
Alignment:
Q  44 tgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgca 110  Q
    |||||||||||||||||||  |||||||||||| || |||||| | || ||||||||| ||| ||||    
T  52496995 tgaagctgatctttcaataagaatcaaacgaacacctcaacaatacgtgaaatcaaacaacgtcgca 52496929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 23799894 - 23799931
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactg 45  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  23799894 ttgacgccgaaatcattgattgaatttgtaattgactg 23799931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 53808019 - 53808068
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaaggacaaaatgatg 228  Q
    |||| |||||||||||||||||||||| |||||||| ||| |||| ||||    
T  53808019 atatttgtgaaaatcacttatttagatcgaacgaaagggaaaaaaagatg 53808068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 6954679 - 6954735
Alignment:
Q  7 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 63  Q
    ||||||| | ||||||||| |||||||||||||| ||||| |  |||||||||||||    
T  6954679 attgacgtccaaatcattggttgaatttgtaattgactgatgtagatctttcaatag 6954735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 7887427 - 7887522
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccg--caacaagatgtaaaatcaaac 101  Q
    |||||||| |||||||| || |||| ||| |||  |||||| |||||||||||||| ||  |||||||| |||  ||||||||||  |||||||||    
T  7887427 ttgacgcccaaatcattaatcgaatatgtgattgtctgaagttgatctttcaataggaactaaacgaacaccgcacaacaagatgcgaaatcaaac 7887522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 32701595 - 32701563
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaatt 40  Q
    |||||||| ||||||||||||||||||||||||    
T  32701595 ttgacgcccaaatcattgattgaatttgtaatt 32701563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 37040864 - 37040780
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    ||||||||||||| |||| ||||| || || |   |||||||||||||||  |||||||| |||| |||||| || |||||||||    
T  37040864 aaatcattgattggatttataattgaccgatgtcaatctttcaatagaaactaaacgaacgccgcgacaagacgtgaaatcaaac 37040780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 47896087 - 47896051
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaa 215  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  47896087 atatatgtgaaaaccacttatttagattgaaagaaaa 47896051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 53508156 - 53508120
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaa 215  Q
    |||||||||||||||||||||||| |||||| |||||    
T  53508156 atatatgtgaaaatcacttatttatattgaaagaaaa 53508120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 6e-24; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 38880571 - 38880655
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||  || ||||||||| ||||||||||||| ||||||||||    
T  38880571 aaatcattgattgaatttgtgattgactgaagctgatctttcaataagaaccaaacgaacaccgcaacaagatgcaaaatcaaac 38880655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 28476334 - 28476183
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca----acaagatgtaaaatcaaacta 103  Q
    |||||||| |||||||||| ||||||||| |||  ||||||||||||||||||||  || ||||||||| |||||    | ||||||  ||||||||| |    
T  28476334 ttgacgcccaaatcattgaatgaatttgtgattgtctgaagctgatctttcaatacgaaccaaacgaacaccgcacaacaaaagatgcgaaatcaaacaa 28476235  T
Q  104 cgccgcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 154  Q
    |||||||| | |||||  |||| ||||||| | ||| |||||| ||||||||    
T  28476234 cgccgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcac 28476183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 22743051 - 22742900
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccg--caac--aagatgtaaaatcaaacta 103  Q
    |||||||  |||||||||||||||||||| |||  ||||||||||||||||||||  || ||||||||| |||  ||||  || |||| ||||||||| |    
T  22743051 ttgacgctcaaatcattgattgaatttgtgattggctgaagctgatctttcaatacgaaccaaacgaacgccgcacaactaaaaatgtgaaatcaaacaa 22742952  T
Q  104 cgccgcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 154  Q
    |||||||| | |||||  |||| ||||||| | ||| |||||| ||||||||    
T  22742951 cgccgcacaagacgacgaacaacacaacgtcgaactaagacgacgaaatcac 22742900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 37837442 - 37837535
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||| ||||||||| |||||||||||||| ||||| |  ||||||||||||| ||  |||||||| |||| |||||| | ||||||||||    
T  37837442 ttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcaataggaactaaacgaacaccgcgacaagacgcaaaatcaaac 37837535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 22087412 - 22087344
Alignment:
Q  20 tcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 88  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||  ||||||| ||| | |||||||||    
T  22087412 tcattgattgaatttgtaattgactgaagttgatctttcaataggtatcaaacaaacacagcaacaaga 22087344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 5348578 - 5348669
Alignment:
Q  10 gacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||| |||||||||||||||| ||||||| | ||||  |||||||||||||| || ||||||||| |||||| |||| |  |||||||||    
T  5348578 gacgcccaaatcattgattgaatctgtaattgattgaaattgatctttcaataggaaccaaacgaacaccgcaataagacgataaatcaaac 5348669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 45349783 - 45349876
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||| ||||||||| |||||||||||||| ||||| ||  |||||||||||| ||  |||||||| |||| |||||| |  |||||||||    
T  45349783 ttgacgccaaaatcattgcttgaatttgtaattgactgatgccaatctttcaataggaactaaacgaacaccgcgacaagacgcgaaatcaaac 45349876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 35133054 - 35132986
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 76  Q
    |||||||| |||||||||||||||||||| |||  |||||| |||||||||||||  || |||||||||    
T  35133054 ttgacgcccaaatcattgattgaatttgtgattgtctgaagttgatctttcaatacgaaccaaacgaac 35132986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 1749140 - 1749199
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 76  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||  || |||||||||    
T  1749140 aaatcattgattgaatttgtgattgtctgaagctgatctttcaatacgaaccaaacgaac 1749199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 9977190 - 9977245
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 63  Q
    |||||||| ||||||||| |||||||||||||| |||||||  |||||||||||||    
T  9977190 ttgacgcccaaatcattgtttgaatttgtaattgactgaagtcgatctttcaatag 9977245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 24350823 - 24350972
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca----acaagatgtaaaatcaaacta 103  Q
    |||||||| |||||||||||||||||||| |||   |||||||||||||||||||  || ||||||||| | |||    | || |||| ||||||||| |    
T  24350823 ttgacgcccaaatcattgattgaatttgtgatt--gtgaagctgatctttcaatacgaaccaaacgaacactgcacaacaaaaaatgtgaaatcaaacaa 24350920  T
Q  104 cgccgcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 154  Q
    |||||||| | |||||  |||| ||||||| | ||| |||||| ||||||||    
T  24350921 cgccgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcac 24350972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 26623784 - 26623867
Alignment:
Q  19 atcattgattgaatttgtaattaac-tgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||| ||||||| || |||| || ||||| |||||||||||||| || ||||| ||| ||||||||||||| ||||||||||    
T  26623784 atcattaattgaatatgcaattgacctgaagttgatctttcaataggaaccaaacaaacaccgcaacaagatgcaaaatcaaac 26623867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 38798888 - 38798833
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 63  Q
    |||||||| ||||||||| |||||||||||||| ||||| || |||||||||||||    
T  38798888 ttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaatag 38798833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 39328774 - 39328829
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 63  Q
    |||||||| ||||||||| |||||||||||||| ||||| || |||||||||||||    
T  39328774 ttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaatag 39328829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 44311776 - 44311922
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    ||||| || |||| ||||||||||||||||||| ||| |||| ||||||| |||||||| ||||| || | | |||||| |||| ||||||||| ||| |    
T  44311776 ttgacacccaaattattgattgaatttgtaattgacttaagccgatcttttaatagaaaccaaac-aaatacacaacaaaatgtgaaatcaaacaacgtc 44311874  T
Q  108 gcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 154  Q
    |||  | |||||  |||| ||||||  | |||||||||| ||||||||    
T  44311875 gcagaagacgacgaacaatacaacgacgcactcagacgatgaaatcac 44311922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 4530180 - 4530090
Alignment:
Q  11 acgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    ||||||||||| | |||||||||||||| | ||||||| ||||||||||| || ||  ||  |||| ||||||||||| | ||||||||||    
T  4530180 acgcctaaatcttggattgaatttgtaactgactgaagttgatctttcaacagtaactaattgaacaccgcaacaagacgcaaaatcaaac 4530090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 19404740 - 19404834
Alignment:
Q  7 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    ||||||||| |||||||||||||||||||||||| || || |   ||||||||| || ||  ||| |||| |||| |||||||| ||||||||||    
T  19404740 attgacgcccaaatcattgattgaatttgtaattgacagatgtcaatctttcaagaggaactaaaagaacaccgcgacaagatgcaaaatcaaac 19404834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 31482082 - 31482172
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||| |||||||||||||||  ||  ||| | |||||||| | |||||||||||||||||||||| |||||| |||| || |||||||||    
T  31482082 ttgacgcc-aaatcattgattgaaagtg--attgagtgaagctgttttttcaatagaaatcaaacgaacaccgcaataagacgtgaaatcaaac 31482172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 24770353 - 24770273
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaat-agaaatcaaacgaactccgcaacaaga 88  Q
    |||||||| ||||||||| |||||||||| ||| ||||| || ||||||||||| |||||| |||||||| |||| ||||||    
T  24770353 ttgacgcccaaatcattggttgaatttgtgattgactgatgccgatctttcaataagaaat-aaacgaacaccgcgacaaga 24770273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 39229119 - 39229055
Alignment:
Q  10 gacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacga 74  Q
    |||||| || |||| | |||||| ||||||| ||||||| ||||||||||||||||| |||||||    
T  39229119 gacgcccaagtcatcggttgaatctgtaattgactgaagttgatctttcaatagaaaccaaacga 39229055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 9450294 - 9450328
Alignment:
Q  183 atgtgaaaatcacttatttagattgaacgaaaagg 217  Q
    ||||||||||||||||||||||||||| |||||||    
T  9450294 atgtgaaaatcacttatttagattgaaagaaaagg 9450328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 19404911 - 19404957
Alignment:
Q  182 tatgtgaaaatcacttatttagattgaacgaaaaggacaaaatgatg 228  Q
    |||||||||| ||||||||||||||||| |||||||| |||| ||||    
T  19404911 tatgtgaaaaccacttatttagattgaaagaaaaggaaaaaaagatg 19404957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 24069387 - 24069481
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    |||||||||||||||  ||| ||| |  ||||||||| ||||||||  |||||||||||| ||||||||| | |  ||||||||  |||||||||    
T  24069387 aaatcattgattgaacctgtgattgatcgaagctgatatttcaatatgaatcaaacgaacaccgcaacaatacgccaaatcaaaaaacgccgcac 24069481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 24351000 - 24351046
Alignment:
Q  182 tatgtgaaaatcacttatttagattgaacgaaaaggacaaaatgatg 228  Q
    |||||||||||||||||||||||||||| |||| ||| |||| ||||    
T  24351000 tatgtgaaaatcacttatttagattgaaagaaagggaaaaaaggatg 24351046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 30756976 - 30757010
Alignment:
Q  183 atgtgaaaatcacttatttagattgaacgaaaagg 217  Q
    ||||||||||||||||||||||||||| |||||||    
T  30756976 atgtgaaaatcacttatttagattgaaagaaaagg 30757010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 37837608 - 37837650
Alignment:
Q  175 cttaatatatgtgaaaatcacttatttagattgaacgaaaagg 217  Q
    ||||||||||||| ||| ||||||||||||||||| |||||||    
T  37837608 cttaatatatgtgtaaaccacttatttagattgaaagaaaagg 37837650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 42978547 - 42978509
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaagg 217  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  42978547 atatatgtgaaaaccacttatttagattgatcgaaaagg 42978509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 1749300 - 1749341
Alignment:
Q  182 tatgtgaaaatcacttatttagattgaacgaaaaggacaaaa 223  Q
    |||||||||||||||||||||||||||| |||| ||| ||||    
T  1749300 tatgtgaaaatcacttatttagattgaaagaaagggaaaaaa 1749341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 24770192 - 24770155
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaag 216  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  24770192 atatatgtgaaaaccacttatttagattgaaagaaaag 24770155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 25287169 - 25287262
Alignment:
Q  7 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 100  Q
    ||||||||  |||||||||||||||||||||||| | ||| |   |||||||||||  ||  ||| |||| |||| ||||||||| ||||||||    
T  25287169 attgacgctcaaatcattgattgaatttgtaattgattgatgtcaatctttcaataagaagtaaatgaacaccgcgacaagatgtgaaatcaaa 25287262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 47590418 - 47590325
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||| ||||||||| |||||||||||||| || || |  ||||||||||||| ||| | || ||| ||||  ||||| | ||||||||||    
T  47590418 ttgacgcccaaatcattggttgaatttgtaattgacggatgtagatctttcaataggaattatacaaacaccgcggcaagacgcaaaatcaaac 47590325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 11343917 - 11343837
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 88  Q
    |||||| | |||||||| ||| ||||||||||| ||||||  | |||||||||||  || ||||| ||| |||||||||||    
T  11343917 ttgacgtccaaatcattaattaaatttgtaattgactgaatttaatctttcaatatgaaccaaacaaacaccgcaacaaga 11343837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 22742872 - 22742840
Alignment:
Q  182 tatgtgaaaatcacttatttagattgaacgaaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  22742872 tatgtgaaaatcacttatttagattgaaagaaa 22742840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 25287335 - 25287375
Alignment:
Q  175 cttaatatatgtgaaaatcacttatttagattgaacgaaaa 215  Q
    ||||||||| |||||||||||||||||||||| || |||||    
T  25287335 cttaatatacgtgaaaatcacttatttagattaaaagaaaa 25287375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 27997192 - 27997105
Alignment:
Q  11 acgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    ||||| |||||||||| | ||||| ||||| |   ||| |||||||||||||  |||||||||||| | ||||||||||| ||||| ||||    
T  27997192 acgcccaaatcattgacttaatttataattga---aagttgatctttcaatatgaatcaaacgaacactgcaacaagatgcaaaataaaac 27997105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 28476155 - 28476123
Alignment:
Q  182 tatgtgaaaatcacttatttagattgaacgaaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  28476155 tatgtgaaaatcacttatttagattgaaagaaa 28476123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 46700133 - 46700049
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    ||||||||||||||||||||| || ||||| |  ||| ||||||||| ||  |||||||| || | |||||| || |||||||||    
T  46700133 aaatcattgattgaatttgtagttgactgatgtcgatatttcaataggaactaaacgaacaccacgacaagacgtgaaatcaaac 46700049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 48930714 - 48930682
Alignment:
Q  182 tatgtgaaaatcacttatttagattgaacgaaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  48930714 tatgtgaaaatcacttatttagattgaaagaaa 48930682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 30400020 - 30400112
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 100  Q
    |||||||| |||||||||||||||||||||||| ||||||| |||||||||||||| ||  |||||||| |||| ||| |||| |||||||||    
T  30400020 ttgacgcccaaatcattgattgaatttgtaattgactgaagttgatctttcaataggaactaaacgaacaccgcgacacgatgcaaaatcaaa 30400112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 17151536 - 17151445
Alignment:
Q  10 gacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||| |||||||||||||||| ||||||| ||||||  |||||||||||||| |||||||||||| ||| |||||||||  |||||||||    
T  17151536 gacgcccaaatcattgattgaatctgtaattgactgaaattgatctttcaataggaatcaaacgaacaccgtaacaagatgcgaaatcaaac 17151445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 28871775 - 28871866
Alignment:
Q  10 gacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||||||||||| |||||| ||||||| ||||||| |||||||||||||| || ||||||||| |||| |||||| |  |||||||||    
T  28871775 gacgcctaaatcattggttgaatctgtaattgactgaagttgatctttcaataggaaccaaacgaacaccgcgacaagacgcgaaatcaaac 28871866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 41327618 - 41327525
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||| | ||||||||| |||||||||||||| ||||||   |||||||||||||||| ||||||||| ||||||||| | || |||||||||    
T  41327618 ttgacgtccaaatcattggttgaatttgtaattgactgaaatagatctttcaatagaaaccaaacgaacaccgcaacaatacgtgaaatcaaac 41327525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 155
Target Start/End: Original strand, 32448604 - 32448751
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||| | |||||||||||||||| ||| ||| |||||||||||||||||||||  || | ||||||| |||||||||||||  ||||||||| ||| |    
T  32448604 ttgacgtccaaatcattgattgaatctgtgattgactgaagctgatctttcaatatgaa-ccaacgaacaccgcaacaagatgccaaatcaaacaacggc 32448702  T
Q  108 gcacta-acgacatacaagacaacgtggtactcagacgaagaaatcaca 155  Q
    |||| | |||||  |||| |||| || | ||| |||||| |||||||||    
T  32448703 gcacaagacgacgaacaacacaaggtcgcacttagacgacgaaatcaca 32448751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 28533939 - 28534042
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||| | |||||||| ||||||| ||| ||| | |||||||  ||||||||||| |||||||||||| |||||||||||| | ||||||||| ||| |    
T  28533939 ttgacgtccaaatcatttattgaatctgtgattgagtgaagcttgtctttcaataggaatcaaacgaacaccgcaacaagatttgaaatcaaacaacgtc 28534038  T
Q  108 gcac 111  Q
    ||||    
T  28534039 gcac 28534042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 29574622 - 29574716
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    |||||||||||||||| ||| ||| ||||||||| |||||||||||  |||||||| ||| | ||||||| |||| ||||||||| | |||||||    
T  29574622 aaatcattgattgaatctgtgattgactgaagctaatctttcaatatgaatcaaacaaacactgcaacaaaatgtgaaatcaaacaatgccgcac 29574716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 36175481 - 36175561
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 88  Q
    |||||| | |||||||||||||||| |||||||   ||| | ||||||||||||||||| ||||||||| |||||||||||    
T  36175481 ttgacgtccaaatcattgattgaatatgtaattgtttgatgttgatctttcaatagaaaccaaacgaacaccgcaacaaga 36175561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 12554175 - 12554242
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaac 84  Q
    |||||||||||||||| ||||||| ||||||| |||| ||||||||  |||||||||||| |||||||    
T  12554175 aaatcattgattgaatctgtaattgactgaagttgatatttcaatatgaatcaaacgaacaccgcaac 12554242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 17249132 - 17249234
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||| | |||||||||||||||| ||| ||| |||||| ||||||||||||||  || | ||| ||| |||||||||||||  |||| ||||||||||    
T  17249132 ttgacgtccaaatcattgattgaatctgtgattgactgaaactgatctttcaatatgaa-ccaacaaacaccgcaacaagatgccaaataaaactacgcc 17249230  T
Q  108 gcac 111  Q
    ||||    
T  17249231 gcac 17249234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 23933604 - 23933707
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||| | |||| ||||||||||| ||| ||| ||||||| ||| |||||||||  || ||||||||| ||||||||||||| ||| |||||| || ||    
T  23933604 ttgacgtccaaataattgattgaatctgtgattgactgaagttgaactttcaataagaaccaaacgaacaccgcaacaagatgcaaattcaaacaacacc 23933703  T
Q  108 gcac 111  Q
    ||||    
T  23933704 gcac 23933707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 3309057 - 3308909
Alignment:
Q  11 acgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccg--caacaa--gatgtaaaatcaaactacgc 106  Q
    ||||| |||||||||||||||||||| |||  |||||| |||| |||||||| ||| ||||||||| |||  ||||||  ||||  ||||||||| ||||    
T  3309057 acgcccaaatcattgattgaatttgtgattgtctgaagttgatatttcaatacaaaccaaacgaacaccgcacaacaaaggatgctaaatcaaacaacgc 3308958  T
Q  107 cgcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 154  Q
    ||||| | |||||| | || ||||||| | ||| |||||| ||||||||    
T  3308957 cgcacaagacgacaaataacacaacgtcgcactaagacgacgaaatcac 3308909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 4264588 - 4264494
Alignment:
Q  7 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||| ||||||||||||||| ||| ||||||| ||||||| |||||||||||||  || |||| |||| |||||| |||| |  |||||||||    
T  4264588 attgactcctaaatcattgattaaatctgtaattgactgaagttgatctttcaataagaaccaaatgaacaccgcaataagacgcgaaatcaaac 4264494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 6436723 - 6436629
Alignment:
Q  7 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    ||||||| | |||||||||||||||| | | ||| |||||||||||||||||| ||  || || |||||| ||| ||||||||| ||||||||||    
T  6436723 attgacgtccaaatcattgattgaatatttgattgactgaagctgatctttcattatgaaccagacgaacaccgtaacaagatgcaaaatcaaac 6436629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 11812784 - 11812694
Alignment:
Q  22 attgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcact 112  Q
    ||||||||||| ||||||  ||||||||||||||||| |||| |||||||  ||| |||||||||||   |||||||||| ||| ||||||    
T  11812784 attgattgaatctgtaatcgactgaagctgatctttctataggaatcaaataaacaccgcaacaagacacaaaatcaaacaacgtcgcact 11812694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 25509053 - 25509146
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||| | |||||||||||||||||||||| ||||| | |||||||||||| | ||  |||||||| |||| ||||||   ||||||||||    
T  25509053 ttgacgcccagatcattgattgaatttgtaattgactgatgttgatctttcaatgggaactaaacgaacaccgcgacaagacacaaaatcaaac 25509146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 10237201 - 10237269
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 76  Q
    |||||| | |||||||||||||||||||| |||  ||||||||||||||||||||  || |||||||||    
T  10237201 ttgacgtccaaatcattgattgaatttgtgattgtctgaagctgatctttcaatacgaaccaaacgaac 10237269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 31128765 - 31128845
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 88  Q
    ||||||||||||||||||||||||||||||||| |||||    ||| ||||||||| ||  |||||||| |||| ||||||    
T  31128765 ttgacgcctaaatcattgattgaatttgtaattgactgatatcgatttttcaataggaactaaacgaacaccgcgacaaga 31128845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 1415672 - 1415617
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 63  Q
    |||||||| ||||||||| |||||||||||||| ||||| || |||||||||||||    
T  1415672 ttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaatag 1415617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 10929771 - 10929700
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 88  Q
    |||||||||||||||| ||| ||| |||||||||||| |||||| |  || ||||||||| |||||||||||    
T  10929771 aaatcattgattgaatctgtgattgactgaagctgatttttcaacatgaaccaaacgaacaccgcaacaaga 10929700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 33760187 - 33760258
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 88  Q
    |||||||||||||| | | ||||| ||||||| |||||||||||||  |||||||||||| | |||||||||    
T  33760187 aaatcattgattgagtctataattgactgaagttgatctttcaatatgaatcaaacgaacactgcaacaaga 33760258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 12677435 - 12677493
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaa 66  Q
    |||||||| ||||||||| |||||||||||||| ||| | || ||||||||||||||||    
T  12677435 ttgacgcccaaatcattggttgaatttgtaattgacttatgccgatctttcaatagaaa 12677493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 10792862 - 10792914
Alignment:
Q  20 tcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaac 72  Q
    ||||||||||||||||||||| | |||||||  |||||||||| |||||||||    
T  10792862 tcattgattgaatttgtaattcagtgaagctagtctttcaataaaaatcaaac 10792914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 41694736 - 41694684
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaa 60  Q
    |||| ||| |||||||||||||||| |||||||  ||||||||||||||||||    
T  41694736 ttgatgcccaaatcattgattgaatatgtaattggctgaagctgatctttcaa 41694684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 209
Target Start/End: Complemental strand, 4192805 - 4192774
Alignment:
Q  178 aatatatgtgaaaatcacttatttagattgaa 209  Q
    ||||||||||||||||||||||||||||||||    
T  4192805 aatatatgtgaaaatcacttatttagattgaa 4192774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 19028899 - 19028954
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 63  Q
    |||||||  ||||||||||||||||||||| || |||||||  |||||||||||||    
T  19028899 ttgacgctcaaatcattgattgaatttgtacttgactgaagtcgatctttcaatag 19028954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 19597980 - 19597901
Alignment:
Q  22 attgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    ||||||| ||||||| ||||||||||| || ||||||||||  ||||||||||||  | ||||||||   ||||||||||    
T  19597980 attgattaaatttgtgattaactgaagttggtctttcaataagaatcaaacgaacatcacaacaagacacaaaatcaaac 19597901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 33923820 - 33923765
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 63  Q
    |||||||| ||||||||| |||||||||||||| ||||| |  |||||||||||||    
T  33923820 ttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcaatag 33923765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 35220440 - 35220385
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 63  Q
    |||||||| ||||||||| |||||||||||||  ||||| | ||||||||||||||    
T  35220440 ttgacgcccaaatcattggttgaatttgtaatggactgatgttgatctttcaatag 35220385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 37994360 - 37994301
Alignment:
Q  42 actgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||||||| ||||||||  ||||||| |||| | ||||||||||| ||||||||||    
T  37994360 actgaagctgatttttcaatatgaatcaaatgaacactgcaacaagatgcaaaatcaaac 37994301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 4904149 - 4904223
Alignment:
Q  27 ttgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||||||||| ||||| |  ||||||||||||  || ||||||||| |||||||||||   ||||||||||    
T  4904149 ttgaatttgtaattgactgatgtcgatctttcaatatgaaccaaacgaacaccgcaacaagacacaaaatcaaac 4904223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 14955644 - 14955570
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 82  Q
    |||||||  |||||||||||||||||| | |||| |||||| |||| ||||||||  || ||||||||| |||||    
T  14955644 ttgacgctcaaatcattgattgaatttatgattatctgaagatgatatttcaatatgaaccaaacgaacaccgca 14955570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 24461549 - 24461479
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaag 87  Q
    ||||||| |||||||| |||  || ||||||| |||||||||||||  || ||||||||| ||||||||||    
T  24461549 aaatcatcgattgaatctgtggttgactgaagttgatctttcaatatgaaccaaacgaacaccgcaacaag 24461479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 43397274 - 43397312
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaagg 217  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  43397274 atatatgtgaaaaccacttatttagattgaaagaaaagg 43397312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 12648078 - 12648115
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaag 216  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  12648078 atatatgtggaaatcacttatttagattgaaagaaaag 12648115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 14423440 - 14423347
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||| | |||||||||||| ||| ||||||| ||| |||  ||||||||||||  || ||||| ||| |||||| || |||| |||||||||    
T  14423440 ttgacgtccaaatcattgattaaatctgtaattgactaaagtcgatctttcaataagaaccaaacaaacaccgcaataaaatgtgaaatcaaac 14423347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 28227839 - 28227876
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaag 216  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  28227839 atatttgtgaaaatcacttatttagattgaaagaaaag 28227876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 29279724 - 29279761
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaag 216  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  29279724 atatatgtgaaaaccacttatttagattgaaagaaaag 29279761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 31128933 - 31128970
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaag 216  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  31128933 atatatgtgaaaaccacttatttagattgaaagaaaag 31128970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 36691989 - 36691896
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||| | ||||||||| |||||||||||||| || || |   |||||||| ||||||  |||||||| |||| ||||||||  |||||||||    
T  36691989 ttgacgtccaaatcattgcttgaatttgtaattgaccgatgtcaatctttcagtagaaactaaacgaacaccgcgacaagatgcgaaatcaaac 36691896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 42698695 - 42698744
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaa 66  Q
    |||||| ||||||||||||||||| ||||| |  ||||||||||||||||    
T  42698695 aaatcactgattgaatttgtaattcactgatgtcgatctttcaatagaaa 42698744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 7646580 - 7646536
Alignment:
Q  16 taaatcattgattgaatttgtaattaactgaagctgatctttcaa 60  Q
    ||||||||||||||||||||||||| ||||| |  ||||||||||    
T  7646580 taaatcattgattgaatttgtaattgactgatgtagatctttcaa 7646536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 10237370 - 10237402
Alignment:
Q  182 tatgtgaaaatcacttatttagattgaacgaaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  10237370 tatgtgaaaatcacttatttagattgaaagaaa 10237402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 18763583 - 18763515
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 76  Q
    |||||||| |||| |||| |||||||||||||| | ||| || ||||||||||||| ||  ||||||||    
T  18763583 ttgacgcccaaatgattggttgaatttgtaattgattgatgccgatctttcaataggaactaaacgaac 18763515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 19062337 - 19062389
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaa 60  Q
    |||||| | |||||||||||||||||||||||| ||||| |  ||||||||||    
T  19062337 ttgacgtccaaatcattgattgaatttgtaattgactgatgtagatctttcaa 19062389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 29574787 - 29574823
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaa 215  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  29574787 atatatgtggaaatcacttatttagattgaaagaaaa 29574823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 31788398 - 31788366
Alignment:
Q  183 atgtgaaaatcacttatttagattgaacgaaaa 215  Q
    ||||||||||||||||||||||||||| |||||    
T  31788398 atgtgaaaatcacttatttagattgaaagaaaa 31788366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 111
Target Start/End: Original strand, 34128668 - 34128772
Alignment:
Q  7 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgc 106  Q
    ||||||||| |||| ||||||||||||| ||||  ||| |||  ||||||| ||||| || ||||| ||| || |||||||| | | |||||||| |||     
T  34128668 attgacgcccaaataattgattgaatttataatcgactaaagtcgatcttttaataggaaccaaacaaacaccacaacaagacgcacaatcaaacaacgt 34128767  T
Q  107 cgcac 111  Q
    |||||    
T  34128768 cgcac 34128772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 34599073 - 34599013
Alignment:
Q  51 gatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    ||||||||||||  ||||||| |||| |||||  |||||| |||||||||| |||||||||    
T  34599073 gatctttcaatatgaatcaaatgaacaccgcacgaagatggaaaatcaaacaacgccgcac 34599013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 1e-18; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 5333536 - 5333433
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||||| |||| ||||||||||| ||| ||| ||||||| |||||||||||||| || ||||||||| ||| ||||||| | |||||||||| || ||    
T  5333536 ttgacgcccaaataattgattgaatatgtgattgactgaagttgatctttcaataggaaccaaacgaacaccggaacaagacgcaaaatcaaacaacacc 5333437  T
Q  108 gcac 111  Q
    ||||    
T  5333436 gcac 5333433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 15344415 - 15344313
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||| | |||||||||||||||| ||| ||| ||||||  |||||||||||||  || ||| ||||| |||||||||||||| |||||||||||||||    
T  15344415 ttgacgtccaaatcattgattgaatctgtgattgactgaacttgatctttcaatatgaaccaa-cgaacaccgcaacaagatgtcaaatcaaactacgcc 15344317  T
Q  108 gcac 111  Q
    ||||    
T  15344316 gcac 15344313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 15433480 - 15433378
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||| | |||||||||||||||| ||| ||| ||||||  |||||||||||||  || ||| ||||| |||||||||||||| |||||||||||||||    
T  15433480 ttgacgtccaaatcattgattgaatctgtgattgactgaacttgatctttcaatatgaaccaa-cgaacaccgcaacaagatgtcaaatcaaactacgcc 15433382  T
Q  108 gcac 111  Q
    ||||    
T  15433381 gcac 15433378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 15524784 - 15524682
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||| | |||||||||||||||| ||| ||| ||||||  |||||||||||||  || ||| ||||| |||||||||||||| |||||||||||||||    
T  15524784 ttgacgtccaaatcattgattgaatctgtgattgactgaacttgatctttcaatatgaaccaa-cgaacaccgcaacaagatgtcaaatcaaactacgcc 15524686  T
Q  108 gcac 111  Q
    ||||    
T  15524685 gcac 15524682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 41896624 - 41896473
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca----acaagatgtaaaatcaaacta 103  Q
    |||| |||||||||||| ||||||||||| |||  ||||||||||||||||||||  || ||||||||| |||||    | || |||| ||||||||| |    
T  41896624 ttgatgcctaaatcattaattgaatttgtgattgtctgaagctgatctttcaatacgaaccaaacgaacaccgcacaacaaaatatgtgaaatcaaacaa 41896525  T
Q  104 cgccgcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 154  Q
    |||||||| | |||||  |||| ||||||| ||||| |||||| ||||||||    
T  41896524 cgccgcacaagacgaccaacaacacaacgtcgtactaagacgatgaaatcac 41896473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 33347505 - 33347595
Alignment:
Q  10 gacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    ||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||||  |||||| |||| |||||||||||  | |||||||||    
T  33347505 gacgcctaaatcattgattgaatctgtgattgactgaagttgatctttcaatag-gatcaaatgaacaccgcaacaagacatgaaatcaaac 33347595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 1236690 - 1236781
Alignment:
Q  19 atcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    |||||||||||||| ||| ||| ||||||| |||||||||||||  || | ||||||| |||||||||||||  ||||||||| |||||||||    
T  1236690 atcattgattgaatatgtgattgactgaagttgatctttcaatatgaa-ccaacgaacaccgcaacaagatgccaaatcaaacaacgccgcac 1236781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 1239390 - 1239481
Alignment:
Q  19 atcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    |||||||||||||| ||| ||| ||||||| |||||||||||||  || | ||||||| |||||||||||||  ||||||||| |||||||||    
T  1239390 atcattgattgaatatgtgattgactgaagttgatctttcaatatgaa-ccaacgaacaccgcaacaagatgccaaatcaaacaacgccgcac 1239481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 18890681 - 18890749
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 76  Q
    |||||||| |||||||||||||||||||| |||  ||||||||||||||||||||  || |||||||||    
T  18890681 ttgacgcccaaatcattgattgaatttgtgattgtctgaagctgatctttcaatacgaaccaaacgaac 18890749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 41060252 - 41060324
Alignment:
Q  29 gaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||||||||| |||||||||  |||||||| || |||||||||| ||||||||||| | ||||||||||    
T  41060252 gaatttgtaattaagtgaagctgaattttcaatataagtcaaacgaacaccgcaacaagaagcaaaatcaaac 41060324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 45445793 - 45445936
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||||| ||||||||| |||||||||||||| ||||| || ||||||||||||| ||  |||| ||| |||| |||| |||  |||||||   |||||    
T  45445793 ttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaataggaaataaacaaacaccgcgacaaaatgcgaaatcaa---acgcc 45445889  T
Q  108 gcacta-acgacatacaagacaacgtggtactcagacgaagaaatca 153  Q
    |||| | |||||  |||| ||||||| ||||| |||||| |||||||    
T  45445890 gcacaagacgacgaacaatacaacgtcgtacttagacgacgaaatca 45445936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 29617256 - 29617359
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||| | |||||||||||||||| ||| ||| ||||||| || ||||||||||  || ||||||||| ||||||||||| |  |||||||||  ||||    
T  29617256 ttgacgtccaaatcattgattgaatctgtgattgactgaagttggtctttcaataagaaccaaacgaacaccgcaacaagacgcgaaatcaaacagcgcc 29617355  T
Q  108 gcac 111  Q
    ||||    
T  29617356 gcac 29617359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 42046329 - 42046274
Alignment:
Q  7 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaata 62  Q
    ||||||||| |||||||||||||||||||| |||  ||||||||||||||||||||    
T  42046329 attgacgcccaaatcattgattgaatttgtgattgtctgaagctgatctttcaata 42046274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 16247204 - 16247298
Alignment:
Q  7 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    ||||| ||| |||||||||||||||||||||||||| ||| |  |||||||| |||| ||  |||||||| |||| |||||| || |||||||||    
T  16247204 attgatgcccaaatcattgattgaatttgtaattaattgatgtcgatctttccataggaactaaacgaacaccgcgacaagacgtgaaatcaaac 16247298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 18847120 - 18847189
Alignment:
Q  7 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 76  Q
    ||||||||  |||||||||||||||| || |||||||||| ||||| |||||||||| || |||||||||    
T  18847120 attgacgctcaaatcattgattgaatctgcaattaactgatgctgacctttcaataggaaccaaacgaac 18847189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 8981270 - 8981166
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||| | |||||||  ||||||| ||| ||| ||||| |||||||||||||||  || ||||||||| ||||||||||| |  ||||||||  |||||    
T  8981270 ttgacgtccaaatcatcaattgaatctgtgattgactgacgctgatctttcaatatcaaacaaacgaacaccgcaacaagacgcgaaatcaaaaaacgcc 8981171  T
Q  108 gcact 112  Q
    |||||    
T  8981170 gcact 8981166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 20227263 - 20227409
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    ||||| || |||| ||||||||||||||||||| ||| |||| ||||||| |||||||| ||||| || | | |||||| |||| ||||||||| ||| |    
T  20227263 ttgacacccaaattattgattgaatttgtaattgacttaagccgatcttttaatagaaaccaaac-aaatacacaacaaaatgtgaaatcaaacaacgtc 20227361  T
Q  108 gcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 154  Q
    |||  | |||||  |||| ||||||  | |||||||||| ||||||||    
T  20227362 gcagaagacgacgaacaatacaacgacgcactcagacgatgaaatcac 20227409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 28086804 - 28086847
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaa 60  Q
    ||||||||||||||||||||||||||||||||  ||||||||||    
T  28086804 aaatcattgattgaatttgtaattaactgaagtcgatctttcaa 28086847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 39657561 - 39657410
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca----acaagatgtaaaatcaaacta 103  Q
    |||||| | |||||||||||||||||| | |||  |||||||| |||||||||||  || ||||||||| |||||    | ||||||  ||||||||| |    
T  39657561 ttgacgtccaaatcattgattgaatttatgattgtctgaagctaatctttcaatacgaaccaaacgaacaccgcacaacaaaagatgcgaaatcaaacaa 39657462  T
Q  104 cgccgcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 154  Q
    |||||||| | |||||  |||| ||||||| | ||| |||||| ||||||||    
T  39657461 cgccgcacaagacgacgaacaatacaacgtcgcactaagacgacgaaatcac 39657410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 27498347 - 27498414
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 76  Q
    |||||||| |||||||| ||||||||||| | ||||||||| |||||||||||||| ||| ||| ||||    
T  27498347 ttgacgcccaaatcattaattgaatttgt-actaactgaagttgatctttcaataggaattaaatgaac 27498414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 34609940 - 34609860
Alignment:
Q  11 acgcctaaatcattgattgaatttgta----attaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 88  Q
    ||||| ||||||||||||| |||||||    ||| ||||||| |||||||||||| |||| ||||||||| |||||||||||    
T  34609940 acgcccaaatcattgattgcatttgtaactgattgactgaagttgatctttcaatggaaa-caaacgaacaccgcaacaaga 34609860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 33214653 - 33214708
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 63  Q
    |||| ||| ||||||||| |||||||||||||| ||||| || |||||||||||||    
T  33214653 ttgaagcccaaatcattggttgaatttgtaattgactgacgccgatctttcaatag 33214708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 36948425 - 36948512
Alignment:
Q  14 cctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    ||||||||||||||||||||||||||| ||||| |   || ||||||||| ||| |||| ||| |||| |||||| |  |||||||||    
T  36948425 cctaaatcattgattgaatttgtaattgactgatgtcaatttttcaataggaattaaacaaacaccgcgacaagacgcgaaatcaaac 36948512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 8443502 - 8443596
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    |||||||||||||||| ||| ||| ||||||| |||||||||||    || ||||||||| | ||||||||| |   |||||||| |||||||||    
T  8443502 aaatcattgattgaatatgtgattgactgaagttgatctttcaaattgaaccaaacgaacactgcaacaagacgcggaatcaaacaacgccgcac 8443596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 14585634 - 14585600
Alignment:
Q  182 tatgtgaaaatcacttatttagattgaacgaaaag 216  Q
    |||||||||||||||||||||||||||| ||||||    
T  14585634 tatgtgaaaatcacttatttagattgaaagaaaag 14585600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 20553401 - 20553435
Alignment:
Q  183 atgtgaaaatcacttatttagattgaacgaaaagg 217  Q
    ||||||||||||||||||||||||||| |||||||    
T  20553401 atgtgaaaatcacttatttagattgaaagaaaagg 20553435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 20559901 - 20559935
Alignment:
Q  183 atgtgaaaatcacttatttagattgaacgaaaagg 217  Q
    ||||||||||||||||||||||||||| |||||||    
T  20559901 atgtgaaaatcacttatttagattgaaagaaaagg 20559935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 20571463 - 20571497
Alignment:
Q  183 atgtgaaaatcacttatttagattgaacgaaaagg 217  Q
    ||||||||||||||||||||||||||| |||||||    
T  20571463 atgtgaaaatcacttatttagattgaaagaaaagg 20571497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 209
Target Start/End: Original strand, 26469348 - 26469378
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaa 209  Q
    |||||||||||||||||||||||||||||||    
T  26469348 atatatgtgaaaatcacttatttagattgaa 26469378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 33214779 - 33214821
Alignment:
Q  175 cttaatatatgtgaaaatcacttatttagattgaacgaaaagg 217  Q
    ||||||||||| |||||||||||||||| |||||| |||||||    
T  33214779 cttaatatatgcgaaaatcacttatttaaattgaaagaaaagg 33214821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 37971226 - 37971192
Alignment:
Q  183 atgtgaaaatcacttatttagattgaacgaaaagg 217  Q
    ||||||||||||||||||||||||||| |||||||    
T  37971226 atgtgaaaatcacttatttagattgaaagaaaagg 37971192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 41896444 - 41896402
Alignment:
Q  183 atgtgaaaatcacttatttagattgaacgaaaaggacaaaatg 225  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||    
T  41896444 atgtgaaaatcacttatttagattgaaagaaagggaaaaaatg 41896402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 471148 - 471241
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||  |||||||||||||||| | | ||| | ||||| |||||||||||||  || ||||||| | |||||||||||   ||||||||||    
T  471148 ttgacgcacaaatcattgattgaatctatgattgagtgaagatgatctttcaataagaaccaaacgagcaccgcaacaagacacaaaatcaaac 471241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 14545053 - 14545090
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaag 216  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  14545053 atatatgtgaaaaccacttatttagattgaaagaaaag 14545090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 17693596 - 17693689
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||| ||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||  |||| ||| |||| |||| | | ||||||||||    
T  17693596 ttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatcttttaataggaactaaacaaacaccgcgacaaaacgcaaaatcaaac 17693689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 24099271 - 24099384
Alignment:
Q  42 actgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac-taacgacatacaagacaacgtggtactca 140  Q
    |||||||||||| ||||||||  || |||| |||| |||||||||||||  ||||||||| |||| | ||   |||||  |||| ||||||| | |||||    
T  24099271 actgaagctgatttttcaatatgaaccaaatgaacaccgcaacaagatgcgaaatcaaacaacgcggtacaggacgacgaacaacacaacgtcgcactca 24099370  T
Q  141 gacgaagaaatcac 154  Q
    ||||| ||||||||    
T  24099371 gacgacgaaatcac 24099384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 208
Target Start/End: Original strand, 40619224 - 40619253
Alignment:
Q  179 atatatgtgaaaatcacttatttagattga 208  Q
    ||||||||||||||||||||||||||||||    
T  40619224 atatatgtgaaaatcacttatttagattga 40619253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 3673548 - 3673468
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 88  Q
    |||||||| ||| ||||||||  |||||||||| ||||| |  ||||||||||||| ||  ||| |||| |||||||||||    
T  3673548 ttgacgcccaaagcattgatttgatttgtaattgactgatgtcgatctttcaataggaactaaaggaacaccgcaacaaga 3673468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 5046851 - 5046767
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||| ||||||||||| ||||||| ||||||  |||| ||||||||| || ||||||||  ||  |||||| ||| |||||||||    
T  5046851 aaattattgattgaatctgtaattgactgaatttgatttttcaataggaaccaaacgaataccaaaacaaggtgtgaaatcaaac 5046767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 14585784 - 14585716
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 76  Q
    |||||| | |||||| ||||||||||||| |||  ||||||||||| ||||||||  || |||||||||    
T  14585784 ttgacgtccaaatcaatgattgaatttgtgattgtctgaagctgatatttcaatacgaaccaaacgaac 14585716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 14916178 - 14916262
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||||||||||| | | ||| | ||||| || ||||||||||  || ||||||||| |||||||||||  | |||||||||    
T  14916178 aaatcattgattgaatctctgattgattgaagttggtctttcaatatgaaccaaacgaacaccgcaacaagacatgaaatcaaac 14916262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 26469128 - 26469196
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 76  Q
    |||||||| |||||||||||||||| ||  ||||||| ||  |||||||||||||| ||  ||||||||    
T  26469128 ttgacgcccaaatcattgattgaatatgcgattaactaaacttgatctttcaataggaacaaaacgaac 26469196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 154
Target Start/End: Original strand, 19103450 - 19103602
Alignment:
Q  7 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccg--caacaa--gatgtaaaatcaaact 102  Q
    ||||||||| |||||||||||||||||||| |||  |||||||| ||||||| |||  |||||||||||| |||  ||||||  ||||| |||||||||     
T  19103450 attgacgcccaaatcattgattgaatttgtgattgtctgaagctaatctttcgatacgaatcaaacgaacaccgcacaacaaatgatgtgaaatcaaaca 19103549  T
Q  103 acgccgcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 154  Q
    ||||||||| | |||||  |||| ||||||| | ||| |||||| ||||||||    
T  19103550 acgccgcacaagacgactaacaacacaacgtcgcactaagacgacgaaatcac 19103602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 8088196 - 8088298
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||| | |||||||||||||||| ||| ||| |||||||||||||||||||||  || | ||||||| | |||||||||||  ||||||||| |||||    
T  8088196 ttgacgtccaaatcattgattgaatctgtgattgactgaagctgatctttcaatatgaa-ccaacgaacactgcaacaagatgccaaatcaaacaacgcc 8088294  T
Q  108 gcac 111  Q
    ||||    
T  8088295 gcac 8088298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 41749428 - 41749337
Alignment:
Q  10 gacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||| |||||||||||||||||| || |||| | ||||| || ||| ||||||| |||||||||||| | |||||||||||| |||||||||    
T  41749428 gacgtctaaatcattgattgaatctggaattgattgaagttggtctctcaataggaatcaaacgaacactgcaacaagatgtgaaatcaaac 41749337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 37986106 - 37986190
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||||||||||| ||||| | ||  ||| |||||||||||||  |||||||||||| |||||||||||||  |||||||||    
T  37986106 aaatcattgattgaatctgtaaatgacaaaagttgatctttcaataagaatcaaacgaacgccgcaacaagatgcgaaatcaaac 37986190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 6217002 - 6216916
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaa 94  Q
    |||||||| |||||||||||||||||||||||| | ||| |  ||||||||||||||||  |||| ||| | || ||||||||||||    
T  6217002 ttgacgcccaaatcattgattgaatttgtaattgattgatgtagatctttcaatagaaactaaacaaacactgcgacaagatgtaaa 6216916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 19121016 - 19120924
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    ||||||| ||| |||||||| |||||||||||| ||||||||||||| ||||| || || ||||| ||| ||||||||||| |  |||||||||    
T  19121016 ttgacgcttaagtcattgatagaatttgtaattgactgaagctgatc-ttcaaaaggaaacaaacaaacaccgcaacaagacgcgaaatcaaac 19120924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 28540890 - 28541041
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactc--cgcaacaa--gatgtaaaatcaaacta 103  Q
    |||||||| |||||||||||||||||||| |||  |||||||| |||||||||||  || ||||||||| |  | ||||||  ||||  ||||||||| |    
T  28540890 ttgacgcccaaatcattgattgaatttgtgattgtctgaagctaatctttcaatacgaaccaaacgaacaccacacaacaaatgatgcgaaatcaaacaa 28540989  T
Q  104 cgccgcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 154  Q
    |||||||| | |||||  |||| ||||||| | ||| |||||| ||||||||    
T  28540990 cgccgcacaagacgacgaacaacacaacgtcgcactaagacgatgaaatcac 28541041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 13422038 - 13421982
Alignment:
Q  7 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 63  Q
    ||||||||| |||||||||||||||||||||||| ||||| |  |||||||||||||    
T  13422038 attgacgcccaaatcattgattgaatttgtaattgactgatgtcgatctttcaatag 13421982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 26878092 - 26878172
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 88  Q
    |||||||| |||||||||||||||| | ||||| ||||| |  |||||||||| |||||| |||||||| |||| ||||||    
T  26878092 ttgacgcccaaatcattgattgaatatctaattgactgatgtcgatctttcaagagaaattaaacgaacaccgcgacaaga 26878172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 31391737 - 31391829
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 100  Q
    |||||||| ||||||||| |||||||||||||| ||||| || |||||||||||| |||  |||| ||| | || ||||||||  ||||||||    
T  31391737 ttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaataaaaactaaacaaacactgcgacaagatgcgaaatcaaa 31391829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 41630606 - 41630538
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 76  Q
    |||||||| |||||||||||||||||||||||| |||||||  ||||||| ||||| ||  ||||||||    
T  41630606 ttgacgcccaaatcattgattgaatttgtaattgactgaagtcgatcttttaataggaactaaacgaac 41630538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 2979290 - 2979364
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 82  Q
    |||||||| |||||||||||||||||||| |||  |||||| |||||||| ||||  || ||||||||| |||||    
T  2979290 ttgacgcccaaatcattgattgaatttgtgattgtctgaagttgatcttttaatacgaaccaaacgaacaccgca 2979364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 14211331 - 14211257
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 82  Q
    |||||| | ||||||||||||| |||||| |||  ||||||||||||||||||||  || ||||||||| |||||    
T  14211331 ttgacgtccaaatcattgattgcatttgtgattgtctgaagctgatctttcaatacgaaccaaacgaacaccgca 14211257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 39567374 - 39567321
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaat 61  Q
    |||||| | |||||||||||||||||||| |||  |||||||||||||||||||    
T  39567374 ttgacgtccaaatcattgattgaatttgtgattgtctgaagctgatctttcaat 39567321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 10722865 - 10722797
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 76  Q
    |||||||| |||||||||||||||||| ||| | |||||||  ||||||||||||| ||  ||||||||    
T  10722865 ttgacgcccaaatcattgattgaatttttaaatgactgaagtcgatctttcaataggaactaaacgaac 10722797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 11976928 - 11977012
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    ||||||||| |||||||||||||| ||||| || ||||| ||||||||||  |||| ||| |||| |||||| |  |||||||||    
T  11976928 aaatcattggttgaatttgtaattgactgatgccgatctctcaatagaaaataaacaaacaccgcgacaagacgcgaaatcaaac 11977012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 25980262 - 25980182
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 88  Q
    |||||||| ||||||||| ||||||||||| || ||||| | |||||||||||||| ||  |||| ||| |||| ||||||    
T  25980262 ttgacgcccaaatcattggttgaatttgtagttgactgatgttgatctttcaataggaactaaacaaacaccgcgacaaga 25980182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 31316004 - 31315932
Alignment:
Q  16 taaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 88  Q
    ||||| ||||||||||| ||| ||| | |||||||||||||||||||  |||||||| ||| || ||||||||    
T  31316004 taaattattgattgaatatgttattgattgaagctgatctttcaatatgaatcaaacaaacaccacaacaaga 31315932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 35850903 - 35850848
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 63  Q
    |||||||  ||||||||| |||||||||||||| ||||| || |||||||||||||    
T  35850903 ttgacgcacaaatcattggttgaatttgtaattgactgatgccgatctttcaatag 35850848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 8096651 - 8096689
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaagg 217  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  8096651 atatatgtgaaaaccacttatttagattgaaagaaaagg 8096689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 10332539 - 10332665
Alignment:
Q  15 ctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcacta- 113  Q
    ||||||||| ||| |||| ||| ||| |||||  || |||||||||||  |||||||| ||| | ||||||||| |  ||||||||| | ||||||| |     
T  10332539 ctaaatcatcgatcgaatatgtgattgactgagcctaatctttcaatatgaatcaaacaaacactgcaacaagacgcgaaatcaaacaatgccgcacaag 10332638  T
Q  114 acgacatacaagacaacgtggtactca 140  Q
    |||||| |||| ||||||| |||||||    
T  10332639 acgacaaacaacacaacgtcgtactca 10332665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 11977090 - 11977128
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaagg 217  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  11977090 atatatgtgaaaaccacttatttagattgaaagaaaagg 11977128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 1409603 - 1409570
Alignment:
Q  7 attgacgcctaaatcattgattgaatttgtaatt 40  Q
    |||||||| |||||||||||||||||||||||||    
T  1409603 attgacgcataaatcattgattgaatttgtaatt 1409570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 7036163 - 7036126
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaag 216  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  7036163 atatatgtgaaaaccacttatttagattgaaagaaaag 7036126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 28235670 - 28235609
Alignment:
Q  50 tgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    |||||||||||||  ||| ||| |||| |||||| |||||| |||||||||| |||||||||    
T  28235670 tgatctttcaataagaataaaatgaacaccgcaagaagatggaaaatcaaacaacgccgcac 28235609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 2979469 - 2979501
Alignment:
Q  182 tatgtgaaaatcacttatttagattgaacgaaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  2979469 tatgtgaaaatcacttatttagattgaaagaaa 2979501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 4771075 - 4771039
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaa 215  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  4771075 atatatgtgaaaaccacttatttagattgaaagaaaa 4771039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 14211162 - 14211130
Alignment:
Q  182 tatgtgaaaatcacttatttagattgaacgaaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  14211162 tatgtgaaaatcacttatttagattgaaagaaa 14211130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 15571590 - 15571522
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 76  Q
    ||||| || ||||||||||||||||||||| || ||| |||  ||||||||||||| ||  ||||||||    
T  15571590 ttgacacccaaatcattgattgaatttgtagtttactaaagtcgatctttcaatagtaactaaacgaac 15571522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 24229942 - 24229974
Alignment:
Q  183 atgtgaaaatcacttatttagattgaacgaaaa 215  Q
    ||||||||||||||||||||||||||| |||||    
T  24229942 atgtgaaaatcacttatttagattgaaagaaaa 24229974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 28541069 - 28541101
Alignment:
Q  182 tatgtgaaaatcacttatttagattgaacgaaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  28541069 tatgtgaaaatcacttatttagattgaaagaaa 28541101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 35920989 - 35921073
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||||||||||| ||| ||| | ||||  |||||||| ||||| || |||| |||| ||||||||||| |  |||||||||    
T  35920989 aaatcattgattgaatctgtgattgattgaatttgatcttttaataggaaacaaatgaacaccgcaacaagacgcgaaatcaaac 35921073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 39567227 - 39567195
Alignment:
Q  182 tatgtgaaaatcacttatttagattgaacgaaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  39567227 tatgtgaaaatcacttatttagattgaaagaaa 39567195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 26588465 - 26588559
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    |||||||| ||||||| ||| ||| ||||||| |||||||||||||  || ||||||||| ||||||||||| |  ||||||||| |||||||||    
T  26588465 aaatcattaattgaatgtgtgattgactgaagttgatctttcaatatgaaccaaacgaacaccgcaacaagacgggaaatcaaacaacgccgcac 26588559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 679206 - 679113
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgca 110  Q
    |||||||||||||||| ||| ||| |||||| |||| ||||||||| ||| ||||||||  || |||||||| | ||||  |||||||||||||    
T  679206 aaatcattgattgaatatgtgattgactgaaactgacctttcaataaaaaccaaacgaataccacaacaagacgcaaaactaaactacgccgca 679113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 6957256 - 6957163
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||| |||||||||||||||||||| ||| ||| |||||||  ||||| ||||| ||||||||| |||| | ||||||||| || |||| ||||    
T  6957256 ttgatgcctaaatcattgattgaatctgttattgactgaagtcgatctatcaatggaaatcaaatgaacactgcaacaagacgtgaaatgaaac 6957163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 29255430 - 29255503
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgc 81  Q
    |||||||| |||||||||||||||||||||||| ||||| |  ||||||||||||| ||  |||||||| ||||    
T  29255430 ttgacgcccaaatcattgattgaatttgtaattgactgatgaagatctttcaataggaactaaacgaacaccgc 29255503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 11321462 - 11321546
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||| ||||||||||||||||||| ||||| |  ||||||||||||| ||  |||||||| || |||||||| || |||||||||    
T  11321462 aaataattgattgaatttgtaattgactgatgtcgatctttcaataggaactaaacgaacaccacaacaagacgtgaaatcaaac 11321546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 14801933 - 14801865
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 76  Q
    |||||||| |||||||||||||||||||| |||  |||||||| |||||||||||  || |||||||||    
T  14801933 ttgacgcccaaatcattgattgaatttgtgattgtctgaagctaatctttcaatacgaaccaaacgaac 14801865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 528334 - 528437
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||||| |||| ||||||| ||| ||||||| ||||||||||||||||| |||  ||  |||| ||| | |||||||||   |||||||||| |||||    
T  528334 ttgacgcccaaataattgattaaatatgtaatttactgaagctgatctttcgataagaacgaaacaaacactgcaacaagacacaaaatcaaacaacgcc 528433  T
Q  108 gcac 111  Q
    ||||    
T  528434 gcac 528437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 546137 - 546062
Alignment:
Q  8 ttgacgcctaaatcattgattgaattt-gtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 82  Q
    |||||||| |||||||||||||||||| || |||  ||||||||||||||||||||  || ||||||||| |||||    
T  546137 ttgacgcccaaatcattgattgaattttgtgattgtctgaagctgatctttcaatacgaaccaaacgaacaccgca 546062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 31296926 - 31296823
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||| |||||||||  ||||||| |   ||| |||||| ||||| ||||||||  ||||||| |||| | ||||||||||| |||||||||| |||||    
T  31296926 ttgacgtctaaatcatcaattgaatattggattgactgaaactgatttttcaatatgaatcaaatgaacactgcaacaagatgcaaaatcaaacaacgcc 31296827  T
Q  108 gcac 111  Q
    ||||    
T  31296826 gcac 31296823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 8102832 - 8102778
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaata 62  Q
    |||||||| |||||||||| ||||||||| |||  ||||||||||||||||||||    
T  8102832 ttgacgcccaaatcattgaatgaatttgtgattgtctgaagctgatctttcaata 8102778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 23128715 - 23128670
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaata 62  Q
    |||||||||||||||||||||||| ||||| | |||||||||||||    
T  23128715 aaatcattgattgaatttgtaattgactgatgttgatctttcaata 23128670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 34018666 - 34018573
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||| ||||||||  ||||||||||||||||||||    ||||||||||||| ||  |||||||| |||| ||||||  | |||||||||    
T  34018666 ttgacgcccaaatcattagttgaatttgtaattaactgatctcgatctttcaataggaactaaacgaacaccgcgacaagacatgaaatcaaac 34018573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 11321618 - 11321658
Alignment:
Q  175 cttaatatatgtgaaaatcacttatttagattgaacgaaaa 215  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  11321618 cttaatatatgtgaaaaccacttatttagattgaaagaaaa 11321658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 127775 - 127720
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 63  Q
    |||||||| ||||||||||| |||||||||||| ||||| |  |||||||||||||    
T  127775 ttgacgcccaaatcattgatcgaatttgtaattgactgatgtcgatctttcaatag 127720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 22571572 - 22571477
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctga-tctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    ||||||||| |||||||||||||  ||||||||||| | ||||||||  || ||||||||| ||  ||||| | | |||||||||| |||||||||    
T  22571572 aaatcattggttgaatttgtaatcgactgaagctgattttttcaatattaaccaaacgaacaccataacaaaacgcaaaatcaaacaacgccgcac 22571477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 30493638 - 30493535
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 107  Q
    |||||| | |||||||||||||||| ||  ||| ||||||| |||||||||||||  || ||||||||| ||  ||||||||   ||||||||| ||||     
T  30493638 ttgacgtccaaatcattgattgaatatgagattgactgaagttgatctttcaatatgaaccaaacgaacaccagaacaagatacgaaatcaaacaacgct 30493539  T
Q  108 gcac 111  Q
    ||||    
T  30493538 gcac 30493535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 30776766 - 30776715
Alignment:
Q  11 acgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaata 62  Q
    ||||| |||||||||| ||||||||| |||  ||||||||||||||||||||    
T  30776766 acgcccaaatcattgaatgaatttgtgattgtctgaagctgatctttcaata 30776715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 209
Target Start/End: Original strand, 4984694 - 4984724
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaa 209  Q
    |||||||||||||||||||||||||||||||    
T  4984694 atatatgtgaaaatcacttatttagattgaa 4984724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 209
Target Start/End: Original strand, 9508832 - 9508862
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaa 209  Q
    |||||||||||||||||||||||||||||||    
T  9508832 atatatgtgaaaatcacttatttagattgaa 9508862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 20225953 - 20225899
Alignment:
Q  12 cgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaa 66  Q
    |||| |||||||||||||||||||||| | | ||||| ||||||| |||||||||    
T  20225953 cgccaaaatcattgattgaatttgtaactgaatgaagttgatcttccaatagaaa 20225899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 22119937 - 22119883
Alignment:
Q  12 cgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaa 66  Q
    |||| |||||||||||||||||||||| | | ||||| ||||||| |||||||||    
T  22119937 cgccaaaatcattgattgaatttgtaactgaatgaagttgatcttccaatagaaa 22119883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 30894706 - 30894652
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaata 62  Q
    |||||||| ||||||||| |||||||||||||| ||||| |  ||||||||||||    
T  30894706 ttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcaata 30894652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 28981272 - 28981135
Alignment:
Q  19 atcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcacta-acga 117  Q
    |||||||||||||| ||| ||| ||| || || |||||| ||||  || ||||||||| || |||||||||  |||||||||| || |||||  | ||||    
T  28981272 atcattgattgaatctgtgattgactaaaactaatctttgaatatgaaccaaacgaacaccacaacaagatacaaaatcaaacaacaccgcagaagacga 28981173  T
Q  118 catacaagacaacgtggtactcagacgaagaaatcaca 155  Q
    |  |||| ||||||  ||||||||||||  ||||||||    
T  28981172 cgaacaacacaacgccgtactcagacgataaaatcaca 28981135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 34185677 - 34185770
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||| | ||||||||||||||||| || || | |||||| |||||||||||||  ||  ||| |||| || |||||||| | ||||||||||    
T  34185677 ttgacgtccaaatcattgattgaattcgtgatcacctgaagttgatctttcaatatgaactaaaagaacaccacaacaagacgcaaaatcaaac 34185770  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 7515186 - 7515218
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaatt 40  Q
    |||||||||||||||||| ||||||||||||||    
T  7515186 ttgacgcctaaatcattggttgaatttgtaatt 7515218  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 12653026 - 12652966
Alignment:
Q  51 gatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    ||||||||||||  ||||||| |||| |||||  |||||| |||||||||| |||||||||    
T  12653026 gatctttcaatatgaatcaaatgaacaccgcacgaagatggaaaatcaaacaacgccgcac 12652966  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 23947313 - 23947373
Alignment:
Q  51 gatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 111  Q
    ||||||||||||  ||||||| |||| |||||| ||||||  ||||||||| |||||||||    
T  23947313 gatctttcaatatgaatcaaatgaacaccgcaaaaagatgggaaatcaaacaacgccgcac 23947373  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 28981113 - 28981069
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaaggacaaaa 223  Q
    ||||||||| ||||||||||||||||||||| |||| ||| ||||    
T  28981113 atatatgtggaaatcacttatttagattgaaagaaagggaaaaaa 28981069  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 30608667 - 30608711
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaaggacaaaa 223  Q
    ||||||||||||| |||| |||||||||||| |||||||| ||||    
T  30608667 atatatgtgaaaaccactaatttagattgaaagaaaaggagaaaa 30608711  T

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Target: scaffold0445 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 1449 - 1356
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||||| |||| |||| | |||||||||||| ||||| || ||||||||||||| ||  |||||||| ||||||||||| |  |||||||||    
T  1449 ttgacgcccaaattattggtcgaatttgtaattgactgatgccgatctttcaataggaactaaacgaacaccgcaacaagacgcgaaatcaaac 1356  T

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Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 58072 - 58164
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 100  Q
    |||||| | ||||||| |||||||| ||| ||| |||||||||||||||||| ||  || ||||| ||| ||||||||||| | |||||||||    
T  58072 ttgacgtccaaatcatcgattgaatctgtgattgactgaagctgatctttcagtatgaaacaaacaaacaccgcaacaagacgcaaaatcaaa 58164  T

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Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 58233 - 58282
Alignment:
Q  179 atatatgtgaaaatcacttatttagattgaacgaaaaggacaaaatgatg 228  Q
    ||||||||| ||||||||||||||||||||| |||||||| |||| ||||    
T  58233 atatatgtggaaatcacttatttagattgaaagaaaaggaaaaaaggatg 58282  T

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Target: scaffold0262 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 1812 - 1883
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 88  Q
    |||||||||||||||||||||||| || || |  |||||| |||||||||| |||||||| |||| ||||||    
T  1812 aaatcattgattgaatttgtaatttaccgatgtcgatcttccaatagaaattaaacgaacaccgcgacaaga 1883  T

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Target: scaffold0128 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 36931 - 36894
Alignment:
Q  7 attgacgcctaaatcattgattgaatttgtaattaact 44  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  36931 attgacgcccaaatcattgattgaatttgtaattaact 36894  T

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Target: scaffold0042 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 92480 - 92573
Alignment:
Q  8 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 101  Q
    |||||| | |||||||||||||||| ||| ||| ||| ||  |||||||||||||  || ||||||||| || |||||||| || |||||||||    
T  92480 ttgacgtccaaatcattgattgaatctgtgatttactaaaattgatctttcaatatgaaccaaacgaacaccacaacaagacgtgaaatcaaac 92573  T

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Target: scaffold0888 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 1671 - 1730
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 76  Q
    |||||||||||||||||||| |||  |||||| |||||||||||||  || |||||||||    
T  1671 aaatcattgattgaatttgtgattgtctgaagttgatctttcaatacgaaccaaacgaac 1730  T

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Target: scaffold0888; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 1831 - 1863
Alignment:
Q  182 tatgtgaaaatcacttatttagattgaacgaaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  1831 tatgtgaaaatcacttatttagattgaaagaaa 1863  T

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Target: scaffold0347 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 6126 - 5986
Alignment:
Q  17 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcacta-ac 115  Q
    |||||||||||||||| ||| ||| ||||||| | |  ||||||||  || |||| |||| ||||||||| | |  ||||||||| ||||||||| | ||    
T  6126 aaatcattgattgaatatgtgattgactgaagttaacatttcaatatgaaccaaatgaacaccgcaacaatacgcgaaatcaaacaacgccgcacaagac 6027  T
Q  116 gacatacaagacaacgtggtactcagacgaagaaatcacac 156  Q
    |||  |||| ||| | | | |||||||||| ||||||||||    
T  6026 gacgaacaacacatcattgcactcagacgacgaaatcacac 5986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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