View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2244_low_3 (Length: 604)
Name: NF2244_low_3
Description: NF2244
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2244_low_3 |
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Alignment Details
Target: chr2 (Bit Score: 578; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 578; E-Value: 0
Query Start/End: Original strand, 1 - 586
Target Start/End: Original strand, 12700307 - 12700892
Alignment:
| Q |
1 |
ggaagtttatatgtttagtgtttgattcagagttgaataaatggaggaagttgatttcttttcaggatgagcattttactcatatgaataaaaatcaagt |
100 |
Q |
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| T |
12700307 |
ggaagtttatatgtttagtgtttgattcagagttgaataaatggaggaagttgatttcttttcaggatgagcattttactcatatgaataaaaatcaagt |
12700406 |
T |
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| Q |
101 |
tgtttttgtcaataatgctttgcattggttgaccgttagctcgagttatatactcgtgcttgatttgagttgtgatatttggaggaagatgtcattgccg |
200 |
Q |
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| T |
12700407 |
tgtttttgtcaataatgctttgcattggttgaccgttagctcgagttatatactcgtgcttgatttgagttgtgatatttggaggaagatgtcattgccg |
12700506 |
T |
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| Q |
201 |
tatgacccgatttatggagcgggaaacaggacttatctgttggaattagacggttgtctttctgtgattcagatctcggaagcgtggatggttatatggg |
300 |
Q |
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| T |
12700507 |
tatgacccgatttatggagcgggaaacaggacttatctgttggaattagatggttgtctttctgtgattcagatctcggaagcgtggatggttatatggg |
12700606 |
T |
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| Q |
301 |
tgctgaaagattactggaaagatgaatggtgcattgtggataaggtgagtctgaggtgtatcagaggaatggtgccaggcattttcccgatcagtcagac |
400 |
Q |
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| T |
12700607 |
tgctgaaagattactggaaagatgaatggtgcattgtggataaggtgagtctgaggtgtatcagaggaatggtgccaggcattttcccgatcagtcagac |
12700706 |
T |
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| Q |
401 |
aactgaatatgttttcttggcaactcataagcaggttttggtgtatcaacgcaggagtcaagtttggaaagaaatgtattctgtgaagtatagctcaaca |
500 |
Q |
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| T |
12700707 |
aactgaatatgttttcttggcaactcataagcaggttttggtgtatcaacgcaggagtcaagtttggaaagaaatgtattctgtgaagtatagctcaaca |
12700806 |
T |
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| Q |
501 |
cttccgttatggttttcagcacatgcgtatcgcagcacaatgttctcgtgtaactgaggcatggtatgtcggtgactacattagat |
586 |
Q |
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| T |
12700807 |
cttccgttatggttttcagcgcatgcgtatcgcagcacaatgttctcgtgtaactgaggcatggtatgtcggtgactacattagat |
12700892 |
T |
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