View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2246_high_1 (Length: 539)
Name: NF2246_high_1
Description: NF2246
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2246_high_1 |
 |  |
|
| [»] scaffold0034 (1 HSPs) |
 |  |  |
|
| [»] scaffold0072 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 470; Significance: 0; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 18 - 535
Target Start/End: Original strand, 15114476 - 15114994
Alignment:
| Q |
18 |
attctttcacttgaaactttaaatgtggtaacgggtaagcaaaagaagctttagtataacannnnnnngccactttgtaatacacgattaggatttatct |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |
|
|
| T |
15114476 |
attctttcacttgaaactttaaatgtggtaacgggtaagcaaaagaagctttagtataacatttttttgccactttgtaatacacgattaggatttatgt |
15114575 |
T |
 |
| Q |
118 |
aagtaaaatattcatattttattgaaaattattttgcgaacacctttactctctaagaaaaaattggtcaacaaaaattaatatatttgattcaaaattt |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
15114576 |
aagtaaaatattcatattttattgaaaattattttgcgaacacctttactctctaagaaaaaattggtcaacaaaaattaatgtatttgattcaaaattt |
15114675 |
T |
 |
| Q |
218 |
gttctaaatacgtcaatttatgtt-gaccaattttttcctacatttttgaatggagggagtaacttataagcaataatctatttaagttgttttgatgtc |
316 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15114676 |
gttctaaatacgtcaatttatgtttgatcaattttttcttacatttttggatggagggagtaacttataagcaataatctatttaagttgttttgatgtc |
15114775 |
T |
 |
| Q |
317 |
atagaagataaaataaaattactacaagttaagatatatcttttctcaaccttttacttttcttgtaacacatgatgatgatgattatcgccaattttgg |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15114776 |
atagaagataaaataaaattactacaagttaagatatatcttttctcaaccttttacttttcttgtaacacatgatgatgatgattatcgccaattttgg |
15114875 |
T |
 |
| Q |
417 |
tgattaacatgaattgtactgtttattcgattttatttaccacatgaaatttataacaatctttattgatttattttccaggtaaatatcatgtcatgga |
516 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15114876 |
tgattaacatgaattgtactgtttattcgattttatttaccacatgaaatttataacaatctttattgatttattttccaggtaaatatcatgtcatgga |
15114975 |
T |
 |
| Q |
517 |
cttgtgtcctttgctactc |
535 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
15114976 |
cttgtgtcctttgctactc |
15114994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 244
Target Start/End: Complemental strand, 9548142 - 9548074
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgac |
244 |
Q |
| |
|
|||||||| ||||||||||||| |||||||| |||||||||||| |||||||| |||| |||||||||| |
|
|
| T |
9548142 |
aaaaattgttcaacaaaaattattatatttggttcaaaatttgtactaaatacatcaacttatgttgac |
9548074 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 7974879 - 7974778
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttttgaatggaggga |
275 |
Q |
| |
|
||||||||||||| |||| ||||| ||||| ||||||||||| | ||||||||||||||||||||||| ||| ||| || ||||||| | ||||||| |
|
|
| T |
7974879 |
aaaaattggtcaataaaagttaatgtatttttgtcaaaatttgtaccaaatacgtcaatttatgttgacccattcttttttatatttttggaaggaggga |
7974780 |
T |
 |
| Q |
276 |
gt |
277 |
Q |
| |
|
|| |
|
|
| T |
7974779 |
gt |
7974778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 475 - 535
Target Start/End: Complemental strand, 15282431 - 15282371
Alignment:
| Q |
475 |
atctttattgatttattttccaggtaaatatcatgtcatggacttgtgtcctttgctactc |
535 |
Q |
| |
|
||||||||||||||||||| ||| |||| |||||||||||||||||||| |||||| |||| |
|
|
| T |
15282431 |
atctttattgatttattttgcagataaacatcatgtcatggacttgtgttctttgcaactc |
15282371 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 475 - 535
Target Start/End: Complemental strand, 15462800 - 15462740
Alignment:
| Q |
475 |
atctttattgatttattttccaggtaaatatcatgtcatggacttgtgtcctttgctactc |
535 |
Q |
| |
|
||||||||||||||||||| ||| |||| |||||||||||||||||||| |||||| |||| |
|
|
| T |
15462800 |
atctttattgatttattttgcagataaacatcatgtcatggacttgtgttctttgcaactc |
15462740 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 475 - 529
Target Start/End: Complemental strand, 15442631 - 15442577
Alignment:
| Q |
475 |
atctttattgatttattttccaggtaaatatcatgtcatggacttgtgtcctttg |
529 |
Q |
| |
|
||||||||||||||||||| ||| ||| |||||||||||||||||||||||||| |
|
|
| T |
15442631 |
atctttattgatttattttgcagaaaaacatcatgtcatggacttgtgtcctttg |
15442577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 529
Target Start/End: Complemental strand, 15311711 - 15311660
Alignment:
| Q |
478 |
tttattgatttattttccaggtaaatatcatgtcatggacttgtgtcctttg |
529 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||| ||||||||||| ||||| |
|
|
| T |
15311711 |
tttattgatttattttgcagaaaaatatcatgtcgtggacttgtgttctttg |
15311660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 529
Target Start/End: Complemental strand, 15492080 - 15492029
Alignment:
| Q |
478 |
tttattgatttattttccaggtaaatatcatgtcatggacttgtgtcctttg |
529 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||| ||||||||||| ||||| |
|
|
| T |
15492080 |
tttattgatttattttgcagaaaaatatcatgtcgtggacttgtgttctttg |
15492029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 263
Target Start/End: Complemental strand, 29798034 - 29797946
Alignment:
| Q |
178 |
aaattggtcaacaaaaattaatatat---ttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttt |
263 |
Q |
| |
|
|||||||||||||||||||||| ||| ||| |||||||||||| | |||||| | |||||||||| || |||||| | |||||||| |
|
|
| T |
29798034 |
aaattggtcaacaaaaattaatgtatttgttggttcaaaatttgtaccaaatacataaatttatgttaactcatttttgcttacatttt |
29797946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 8777786 - 8777827
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaaattt |
217 |
Q |
| |
|
|||||||| ||||||||| |||||||||||| |||||||||| |
|
|
| T |
8777786 |
aaaaattgatcaacaaaagttaatatatttggttcaaaattt |
8777827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 13209981 - 13210050
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgacc |
245 |
Q |
| |
|
|||||||| ||||||||| ||||| |||||| |||||||||||| | |||| |||| ||||||||||| |
|
|
| T |
13209981 |
aaaaattgatcaacaaaagttaatgtatttggttcaaaatttgtatcagatacatcaacttatgttgacc |
13210050 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 35901133 - 35901060
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgac |
244 |
Q |
| |
|
|||| |||||| ||||||||||| ||||| |||| | ||||||||||| |||| ||| |||| |||||||||| |
|
|
| T |
35901133 |
taagcaaaaataggtcaacaaaagttaatgtattgggctcaaaatttgtactaattacatcaacttatgttgac |
35901060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 8637254 - 8637306
Alignment:
| Q |
184 |
gtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaattt |
236 |
Q |
| |
|
||||| ||||||| ||||||||| ||||||||||| || |||||| ||||||| |
|
|
| T |
8637254 |
gtcaaaaaaaattgatatatttggttcaaaatttggtccaaatacatcaattt |
8637306 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 11196301 - 11196253
Alignment:
| Q |
185 |
tcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaa |
233 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| ||||||| |||| |
|
|
| T |
11196301 |
tcaacaaaaattaatgtatttaattcaaaatttgtattaaatacatcaa |
11196253 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 51; Significance: 6e-20; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 3694078 - 3694012
Alignment:
| Q |
178 |
aaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgac |
244 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
3694078 |
aaattggtcaacaaaaattaatgtatttgattcaaaatttgtattaaatacatcaatttatgttgac |
3694012 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 30693352 - 30693419
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttga |
243 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||||||||||||| | |||||| ||| ||||||||| |
|
|
| T |
30693352 |
aaaaattgatcaacaaaaattaatgtatttgattcaaaatttgtaccaaatacatcatattatgttga |
30693419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 244
Target Start/End: Complemental strand, 5056387 - 5056319
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgac |
244 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||||||||||| |||||| |||| |||||||||| |
|
|
| T |
5056387 |
aaaaattggtcaataaaaattaacgtatttgattcaaaatttgtatcaaatacatcaacttatgttgac |
5056319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 3739912 - 3739805
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttttgaatgg |
270 |
Q |
| |
|
|||| |||||||||||||||||| ||||| |||||| || ||||||||| | |||||| | || || |||||||||||||| | || ||||| | | || |
|
|
| T |
3739912 |
taagcaaaaattggtcaacaaaagttaatgtatttggttaaaaatttgtaccaaatacattaactttcgttgaccaatttttgcttatattttgggacgg |
3739813 |
T |
 |
| Q |
271 |
agggagta |
278 |
Q |
| |
|
|||||||| |
|
|
| T |
3739812 |
agggagta |
3739805 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 9238295 - 9238256
Alignment:
| Q |
178 |
aaattggtcaacaaaaattaatatatttgattcaaaattt |
217 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
9238295 |
aaattgatcaacaaaaattaatatatttgattcaaaattt |
9238256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 171 - 265
Target Start/End: Complemental strand, 38067232 - 38067137
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaa-ttaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttttg |
265 |
Q |
| |
|
|||| ||||||||||||| ||||| |||| ||| |||||||||||||| | |||||||| ||||||||||| || |||| ||| |||||||||| |
|
|
| T |
38067232 |
taaggaaaaattggtcaataaaaaattaacataattgattcaaaatttatactaaatacatcaatttatgtccactcatttcttcttacatttttg |
38067137 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 35310350 - 35310304
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaattt |
217 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
35310350 |
taagtaaaaattggtcaacaaaaattaatgtatttgatttaaaattt |
35310304 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 47543615 - 47543673
Alignment:
| Q |
175 |
aaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaa |
233 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||||||||||| | |||||| |||| |
|
|
| T |
47543615 |
aaaaaattggtcaacaaaaattaatgaatttggttcaaaatttgtaccaaatacatcaa |
47543673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 6061549 - 6061487
Alignment:
| Q |
180 |
attggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttg |
242 |
Q |
| |
|
|||||||||||||||||||| |||||| || ||||||||| ||| |||| | || |||||||| |
|
|
| T |
6061549 |
attggtcaacaaaaattaatgtatttgttttaaaatttgtactagatacattaacttatgttg |
6061487 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 15343239 - 15343304
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgtt |
241 |
Q |
| |
|
|||||||||||||||||| | |||| |||||||| |||| |||| ||||||| |||| ||||||| |
|
|
| T |
15343239 |
aaaaattggtcaacaaaagtcaataaatttgattaaaaaattgtattaaatacatcaacttatgtt |
15343304 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 12276832 - 12276939
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttttgaatgg |
270 |
Q |
| |
|
|||| ||| |||||||| ||||| ||||| ||||||||||||||||| | |||||||| |||| ||||||||||| |||||| | || ||||| |||||| |
|
|
| T |
12276832 |
taagtaaagattggtcagcaaaagttaatgtatttgattcaaaatttatactaaatacatcaacttatgttgacctatttttgcttatattttggaatgg |
12276931 |
T |
 |
| Q |
271 |
agggagta |
278 |
Q |
| |
|
| |||||| |
|
|
| T |
12276932 |
aaggagta |
12276939 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 176 - 263
Target Start/End: Complemental strand, 54235315 - 54235228
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttt |
263 |
Q |
| |
|
|||||||| ||||||||| ||||| |||||| |||||||||||| |||||||| ||||||||| ||||| |||||| | |||||||| |
|
|
| T |
54235315 |
aaaaattgctcaacaaaagttaatgtatttggttcaaaatttgtactaaatacatcaatttatattgactcatttttgcttacatttt |
54235228 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 4423167 - 4423253
Alignment:
| Q |
177 |
aaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttt |
263 |
Q |
| |
|
||||||| |||| |||||||||||||||||||||||||||||| | |||||| |||| |||| |||| | |||||| | |||||||| |
|
|
| T |
4423167 |
aaaattgatcaataaaaattaatatatttgattcaaaatttgtaccaaatacatcaacttatattgatccatttttgcttacatttt |
4423253 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 4479669 - 4479628
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaaattt |
217 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
4479669 |
aaaaattgatcaacaaaaattaatatatttgattcaaaattt |
4479628 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 24980723 - 24980616
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttttgaatgg |
270 |
Q |
| |
|
|||| ||||||| |||||||||||||||| ||||| | |||||||||| | |||| |||| ||||||||| | |||||| | |||||||| ||| || |
|
|
| T |
24980723 |
taagcaaaaatttgtcaacaaaaattaatgtattttgtacaaaatttgtgtcagatacatcaacttatgttgatccatttttacttacattttagaacgg |
24980624 |
T |
 |
| Q |
271 |
agggagta |
278 |
Q |
| |
|
|||||||| |
|
|
| T |
24980623 |
agggagta |
24980616 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 30848690 - 30848596
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttc--taaatacgtcaatttatgttgaccaattttttcctacatttt |
263 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||| |||||||||||| | || |||| |||| ||||||||| | |||||| | |||||||| |
|
|
| T |
30848690 |
taagcaaaaattggtcaacaaaaattaatgtattttgttcaaaatttgtacattagatacatcaacttatgttgatccatttttgcttacatttt |
30848596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 55762957 - 55762914
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaaatttgt |
219 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
55762957 |
aaaaattggtcaacaaaagttaatatatttgattaaaaatttgt |
55762914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 7270190 - 7270227
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaa |
213 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
7270190 |
aaaaattgatcaataaaaattaatatatttgattcaaa |
7270227 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 33759470 - 33759429
Alignment:
| Q |
177 |
aaaattggtcaacaaaaattaatatatttgattcaaaatttg |
218 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
33759470 |
aaaattggtcaacaaaaattaatgtatttagttcaaaatttg |
33759429 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 55827339 - 55827291
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgt |
219 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||||| || ||| ||||| |
|
|
| T |
55827339 |
taagcaaaaattggtcaacaaaagttaatatatttggttaaaattttgt |
55827291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 32221568 - 32221476
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttt |
263 |
Q |
| |
|
|||| ||||||| |||||||||| ||||| |||||| |||||||||||| | |||||| |||||||||| ||| |||||||| | |||||||| |
|
|
| T |
32221568 |
taagcaaaaattagtcaacaaaagttaatgtatttggttcaaaatttgtaccaaatacatcaatttatgctgatcaatttttgcttacatttt |
32221476 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 253
Target Start/End: Complemental strand, 8413885 - 8413802
Alignment:
| Q |
171 |
taagaaaaaattggtc-aacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaatttttt |
253 |
Q |
| |
|
|||| |||||||| || |||||||||| ||| |||| ||||||||||||| |||||||||||||||| |||||||||||||| |
|
|
| T |
8413885 |
taagcaaaaattgatctaacaaaaatttatacatttaattcaaaatttgtatgaaatacgtcaatttatattgaccaatttttt |
8413802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 171 - 252
Target Start/End: Original strand, 31280167 - 31280248
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttt |
252 |
Q |
| |
|
|||| |||||||| ||||||||| ||||| |||||| |||||||||||| | | |||| | |||||||||||| | |||||| |
|
|
| T |
31280167 |
taagtaaaaattgatcaacaaaatttaatgtatttggttcaaaatttgtaccatatacattaatttatgttgatccattttt |
31280248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 26914547 - 26914467
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaatttt |
251 |
Q |
| |
|
|||| |||||||| ||||||||||||||| ||| || |||||||||| | |||||||| |||| ||| |||| ||| |||| |
|
|
| T |
26914547 |
taagcaaaaattgatcaacaaaaattaatgtatgtggttcaaaatttatactaaatacatcaacttaagttgtccattttt |
26914467 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 37330963 - 37331031
Alignment:
| Q |
195 |
ttaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttt |
263 |
Q |
| |
|
||||| ||| || |||||||||||| ||| ||||||||||||||||| ||| |||||| | |||||||| |
|
|
| T |
37330963 |
ttaatgtatatggttcaaaatttgtactagatacgtcaatttatgttaacccatttttgcttacatttt |
37331031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 29637445 - 29637524
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattt |
250 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||| |||| |||| | |||||| ||||||||||||| ||||| |
|
|
| T |
29637445 |
taagaaaaaataagtcaacataaattaatatatttgatacaaattttgaaccaaatactgtaatttatgttgactaattt |
29637524 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 40905814 - 40905860
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaattt |
217 |
Q |
| |
|
|||| |||||||||||||||||| ||||| |||||| |||||||||| |
|
|
| T |
40905814 |
taagcaaaaattggtcaacaaaagttaatttatttggttcaaaattt |
40905860 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 26104235 - 26104331
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttttgaatggag |
272 |
Q |
| |
|
|||||||||| |||||||| |||| ||||| |||||||||||| ||| | ||||||||||||||| |||||| | |||||||| | |||||| |
|
|
| T |
26104235 |
aaaaattggttaacaaaaactaatgtatttagttcaaaatttgtatcaaacaaatcaatttatgttgactcatttttgcttacattttaggatggag |
26104331 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 46733045 - 46733077
Alignment:
| Q |
187 |
aacaaaaattaatatatttgattcaaaatttgt |
219 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |
|
|
| T |
46733045 |
aacaaaaattaatgtatttgattcaaaatttgt |
46733077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 47783090 - 47783138
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgt |
219 |
Q |
| |
|
|||| ||||||||||||| |||| ||||| |||||| |||||||||||| |
|
|
| T |
47783090 |
taagtaaaaattggtcaaaaaaagttaatgtatttggttcaaaatttgt |
47783138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 30794453 - 30794534
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttga-ccaatttt |
251 |
Q |
| |
|
|||| |||| ||||||||||||| ||||||||||||||||||||||||| | |||||| | ||||||||||| |||||||| |
|
|
| T |
30794453 |
taagtaaaatttggtcaacaaaatttaatatatttgattcaaaatttgtaccaaatacattcatttatgttgatccaatttt |
30794534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 23971278 - 23971211
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttga |
243 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |||||||||||| | |||||| |||| |||| |||| |
|
|
| T |
23971278 |
aaaaattggtcaacaaaaataaatatatttagttcaaaatttgtaccaaatacatcaacttatattga |
23971211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 18732083 - 18732007
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttt |
252 |
Q |
| |
|
||||||||||||| |||| ||||| |||||| |||||||||| | | | |||| |||||||||||||| | |||||| |
|
|
| T |
18732083 |
aaaaattggtcaataaaagttaatgtatttggttcaaaatttataccagatacatcaatttatgttgatccattttt |
18732007 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 16866499 - 16866392
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttttgaatgg |
270 |
Q |
| |
|
|||| |||||||||||||||||| ||||| |||||| || ||||||||| | ||||| | || || | |||| |||||||| | || ||||| | |||| |
|
|
| T |
16866499 |
taagcaaaaattggtcaacaaaagttaatgtatttggttaaaaatttgtacctaatacattaacttttattgatcaatttttgcttatattttgggatgg |
16866400 |
T |
 |
| Q |
271 |
agggagta |
278 |
Q |
| |
|
|||||||| |
|
|
| T |
16866399 |
agggagta |
16866392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 185 - 263
Target Start/End: Complemental strand, 32652490 - 32652412
Alignment:
| Q |
185 |
tcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttt |
263 |
Q |
| |
|
|||| |||||||||| |||||| |||||| ||||| | |||||| |||||||||||||| |||||| | |||||||| |
|
|
| T |
32652490 |
tcaataaaaattaatgtatttggttcaaagtttgtaccaaatacaccaatttatgttgacttatttttacttacatttt |
32652412 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 44816484 - 44816546
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttat |
238 |
Q |
| |
|
||||||||| |||||||| ||||| |||||| |||||||||||| | |||||| ||| ||||| |
|
|
| T |
44816484 |
aaaaattggccaacaaaagttaatgtatttggttcaaaatttgtaccaaatacatcagtttat |
44816546 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 5026152 - 5026220
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatg |
239 |
Q |
| |
|
|||| |||||||||| ||||||| ||||||||||| | |||||||||| | |||||| |||| ||||| |
|
|
| T |
5026152 |
taagcaaaaattggttaacaaaagttaatatatttagtccaaaatttgtaccaaatacatcaacttatg |
5026220 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 31323826 - 31323918
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttt |
263 |
Q |
| |
|
|||| |||||||||||||||||| ||||| ||||| |||||||||||| | | |||| |||| ||||||||||| |||||| | |||||||| |
|
|
| T |
31323826 |
taagcaaaaattggtcaacaaaagttaatgtattttgttcaaaatttgtaccagatacatcaacttatgttgacctatttttgcttacatttt |
31323918 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 9829903 - 9829976
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgac |
244 |
Q |
| |
|
|||| ||||||| |||||||||||||||| ||||| || ||||||||| | |||||| ||||||||||||||| |
|
|
| T |
9829903 |
taagtaaaaattagtcaacaaaaattaatgtattttgtttaaaatttgtaccaaatacatcaatttatgttgac |
9829976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 28596087 - 28596131
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaat |
215 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
28596087 |
taagtaaaaattggtcaacaaaaattaatatatttggttcaaaat |
28596131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 35003771 - 35003843
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttga |
243 |
Q |
| |
|
|||| |||||||||| || |||||||||| ||||||||||||||||||| | ||||| |||| ||||||||| |
|
|
| T |
35003771 |
taagtaaaaattggttaataaaaattaatgtatttgattcaaaatttgtacaaaatatatcaacttatgttga |
35003843 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 267
Target Start/End: Original strand, 8211800 - 8211891
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttttgaa |
267 |
Q |
| |
|
|||||||| |||| |||| |||||||||||| | | |||||||| |||||||| | |||||||||||| | |||||| | || ||||||||| |
|
|
| T |
8211800 |
aaaaattgatcaataaaatttaatatatttggtccgaaatttgtactaaatacattaatttatgttgatctatttttacttatatttttgaa |
8211891 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 2282414 - 2282491
Alignment:
| Q |
175 |
aaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttt |
252 |
Q |
| |
|
||||||||||||||||||| ||||| ||||| ||||||| |||| |||||| |||||||||||| || ||||||| |
|
|
| T |
2282414 |
aaaaaattggtcaacaaaagttaatgtatttagttcaaaaattgtatcaaatacatcaatttatgttaactaattttt |
2282491 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 8437872 - 8437815
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatac |
228 |
Q |
| |
|
|||| |||| || |||||||||||||||| ||||||||||||||||||| | |||||| |
|
|
| T |
8437872 |
taagtaaaatttagtcaacaaaaattaatgtatttgattcaaaatttgtaccaaatac |
8437815 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 31522700 - 31522658
Alignment:
| Q |
177 |
aaaattggtcaacaaaaattaatatatttgattcaaaatttgt |
219 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
31522700 |
aaaattggtcaacaaaagttaatgcatttgattcaaaatttgt |
31522658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 1937664 - 1937712
Alignment:
| Q |
178 |
aaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaat |
226 |
Q |
| |
|
||||||||| ||||||||| |||||||||||| ||||||| | |||||| |
|
|
| T |
1937664 |
aaattggtcgacaaaaatttatatatttgatttaaaatttatactaaat |
1937712 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 16)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 171 - 279
Target Start/End: Original strand, 39030575 - 39030683
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttttgaatgg |
270 |
Q |
| |
|
|||| |||||||||||||||||| ||||| |||||| || ||||||||| | |||||| | || || ||||||| ||||||| | || ||||| | |||| |
|
|
| T |
39030575 |
taagcaaaaattggtcaacaaaagttaatgtatttggttaaaaatttgtaccaaatacattaacttttgttgactaatttttgcttatattttgggatgg |
39030674 |
T |
 |
| Q |
271 |
agggagtaa |
279 |
Q |
| |
|
||||||||| |
|
|
| T |
39030675 |
agggagtaa |
39030683 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 42324978 - 42324898
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaatttt |
251 |
Q |
| |
|
|||| |||||||||||||||||| ||||| |||||| || ||||||| | | |||||| ||||||||| |||||||||||| |
|
|
| T |
42324978 |
taagtaaaaattggtcaacaaaagttaatgtatttgttttaaaatttataccaaatacatcaatttatattgaccaatttt |
42324898 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 9956596 - 9956489
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttttgaatgg |
270 |
Q |
| |
|
|||| |||||||||| ||||||| ||||| ||||||||||||||||| | | |||| |||| |||||||||| |||||| | |||||||| | |||| |
|
|
| T |
9956596 |
taagtaaaaattggttaacaaaagttaatgtatttgattcaaaatttataacagatacatcaacatatgttgacccatttttacttacattttgggatgg |
9956497 |
T |
 |
| Q |
271 |
agggagta |
278 |
Q |
| |
|
| |||||| |
|
|
| T |
9956496 |
atggagta |
9956489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 34252729 - 34252836
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttttgaatgg |
270 |
Q |
| |
|
|||| |||||||||||||||||| ||||| |||||| |||||||||| | | | || | |||| ||||||| ||| |||||| | |||||||| | | || |
|
|
| T |
34252729 |
taagcaaaaattggtcaacaaaagttaatgtatttggttcaaaatttatgccacattcatcaacttatgttaacccatttttgcttacattttgggacgg |
34252828 |
T |
 |
| Q |
271 |
agggagta |
278 |
Q |
| |
|
|||||||| |
|
|
| T |
34252829 |
agggagta |
34252836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 33498373 - 33498443
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgtt |
241 |
Q |
| |
|
|||| |||| |||| |||||||||| |||||||||| |||||||||||| | |||||| |||| ||||||| |
|
|
| T |
33498373 |
taagcaaaagttggccaacaaaaatcaatatatttggttcaaaatttgtacaaaatacatcaacttatgtt |
33498443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 968380 - 968288
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttt |
263 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||| |||||||||||| | |||||| |||| ||| |||||| | |||| | |||||||| |
|
|
| T |
968380 |
taagtaaaaatgagtcaacaaaaattaatatatttagttcaaaatttgtaccaaatacatcaacttaaattgacccacttttacttacatttt |
968288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 20219514 - 20219554
Alignment:
| Q |
177 |
aaaattggtcaacaaaaattaatatatttgattcaaaattt |
217 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
20219514 |
aaaattgatcaacaaaagttaatatatttgattcaaaattt |
20219554 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 14325885 - 14325932
Alignment:
| Q |
171 |
taagaaaaaattgg-tcaacaaaaattaatatatttgattcaaaattt |
217 |
Q |
| |
|
|||||||||||| | ||||||||||||||| ||||||||||||||||| |
|
|
| T |
14325885 |
taagaaaaaatttgatcaacaaaaattaatgtatttgattcaaaattt |
14325932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 14646454 - 14646387
Alignment:
| Q |
177 |
aaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgac |
244 |
Q |
| |
|
||||||| | || |||||||||| ||| ||||||||||||||| |||||||| | ||||||| ||||| |
|
|
| T |
14646454 |
aaaattgataaataaaaattaatgtatatgattcaaaatttgtactaaatacattaatttatattgac |
14646387 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 16500569 - 16500640
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttg |
242 |
Q |
| |
|
|||| |||||||| ||||||||||||||| || ||| |||||||||| || | |||| ||||||||||||| |
|
|
| T |
16500569 |
taagcaaaaattgttcaacaaaaattaatgtaattggttcaaaatttaatccagatacatcaatttatgttg |
16500640 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 33670025 - 33669918
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttttgaatgg |
270 |
Q |
| |
|
|||| ||||||||||||| |||| ||||| |||||| || ||||||||| | | |||| || ||||||||||| |||||| | |||||||| | |||| |
|
|
| T |
33670025 |
taagcaaaaattggtcaaaaaaagttaatgtatttggtttaaaatttgtaccagatacactaacttatgttgacccatttttgcttacattttgggatgg |
33669926 |
T |
 |
| Q |
271 |
agggagta |
278 |
Q |
| |
|
| |||||| |
|
|
| T |
33669925 |
atggagta |
33669918 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 14973993 - 14974034
Alignment:
| Q |
187 |
aacaaaaattaatatatttgattcaaaatttgttctaaatac |
228 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| | |||||| |
|
|
| T |
14973993 |
aacaaaaattaatatatttgatttaaaatttgtgccaaatac |
14974034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 252
Target Start/End: Original strand, 15119309 - 15119390
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttt |
252 |
Q |
| |
|
|||| ||||||| ||||| |||| ||||| ||||||||||||||||||| |||||| | || |||| || |||||||||| |
|
|
| T |
15119309 |
taagcaaaaattagtcaataaaacttaatgtatttgattcaaaatttgtattaaatatattaacttatattaaccaattttt |
15119390 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 19644488 - 19644427
Alignment:
| Q |
179 |
aattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgt |
240 |
Q |
| |
|
||||| |||||||||||||| |||||| |||||||||| | |||||||| |||| |||||| |
|
|
| T |
19644488 |
aattgatcaacaaaaattaacgtatttggttcaaaatttatactaaatacatcaacttatgt |
19644427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 5727728 - 5727819
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttt |
263 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||| ||| || ||||||||| | | |||| |||| |||| ||||| |||||| | |||||||| |
|
|
| T |
5727728 |
taagtaaaaattggtcaataaaaattaatata-ttggtttaaaatttgtaccagatacatcaacttattgtgacctatttttacttacatttt |
5727819 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 253
Target Start/End: Complemental strand, 28024007 - 28023939
Alignment:
| Q |
185 |
tcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaatttttt |
253 |
Q |
| |
|
|||| |||| ||||| ||||||||||||||||||| | |||||| | || |||| |||||| ||||||| |
|
|
| T |
28024007 |
tcaataaaagttaatgtatttgattcaaaatttgtacaaaatacattaacttatattgacctatttttt |
28023939 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 18)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 11386326 - 11386402
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttt |
252 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||||||||||| |||||| |||| ||||||||| ||| |||| |
|
|
| T |
11386326 |
aaaaattgatcaacaaaaattaatatatttaattcaaaatttgtatcaaatacatcaacttatgttgatcaaatttt |
11386402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 16180533 - 16180441
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttt |
263 |
Q |
| |
|
|||| |||| ||||||||||||| ||||| |||||| |||||||||| | | ||||| ||||||||||||||| ||||||| | |||||||| |
|
|
| T |
16180533 |
taagtaaaatttggtcaacaaaagttaatgtatttggttcaaaatttatatttaatacatcaatttatgttgactaatttttgcttacatttt |
16180441 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 10459278 - 10459385
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttttgaatgg |
270 |
Q |
| |
|
|||| |||||||||||||||||| ||||| |||||| |||||||||||| | || | |||| |||||||||||||| ||| | |||||||| | | || |
|
|
| T |
10459278 |
taagcaaaaattggtcaacaaaagttaatgtatttggttcaaaatttgtatcagatgcatcaacttatgttgaccaatctttgcttacattttgggacgg |
10459377 |
T |
 |
| Q |
271 |
agggagta |
278 |
Q |
| |
|
|||||||| |
|
|
| T |
10459378 |
agggagta |
10459385 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 276
Target Start/End: Complemental strand, 43398931 - 43398831
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttttgaatggaggga |
275 |
Q |
| |
|
||||||| || ||||||| ||||| |||||| |||||||||||| | |||||| |||| |||| |||||| |||||| | |||||||| ||| |||||| |
|
|
| T |
43398931 |
aaaaatttgttaacaaaagttaatgtatttggttcaaaatttgtaccaaatacatcaacttatattgacccatttttacttacattttagaacagaggga |
43398832 |
T |
 |
| Q |
276 |
g |
276 |
Q |
| |
|
| |
|
|
| T |
43398831 |
g |
43398831 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 33829406 - 33829449
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaaatttgt |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
33829406 |
aaaaattggtcaacaaaaattaatatatttggtacaaaatttgt |
33829449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 13453593 - 13453667
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaa-attaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgac |
244 |
Q |
| |
|
|||| |||||||| ||||||||| |||||||| ||| |||||||||||| |||||| | ||||||||||||||| |
|
|
| T |
13453593 |
taagcaaaaattgatcaacaaaaaattaatatctttagttcaaaatttgtgctaaatgcatcaatttatgttgac |
13453667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 29291162 - 29291073
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacat |
260 |
Q |
| |
|
|||| ||||||||||||| |||| |||||||||||| ||||||| | | ||| |||| |||||||||||||| |||||||| ||||| |
|
|
| T |
29291162 |
taagcaaaaattggtcaataaaagttaatatatttggttcaaaaaatttactagatacatcaatttatgttgattcattttttcttacat |
29291073 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 944783 - 944875
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttt |
263 |
Q |
| |
|
|||| |||||| | |||| |||| ||||| ||||| |||||||||||| | |||||| |||| |||||||||| ||||||| | |||||||| |
|
|
| T |
944783 |
taagcaaaaatcgatcaataaaagttaatgtatttagttcaaaatttgtaccaaatacatcaacttatgttgactaatttttacttacatttt |
944875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 33615273 - 33615333
Alignment:
| Q |
181 |
ttggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgtt |
241 |
Q |
| |
|
|||||||| ||| |||||||||||||||||||||||||| |||||| |||| ||||||| |
|
|
| T |
33615273 |
ttggtcaataaatattaatatatttgattcaaaatttgtatcaaatacatcaacttatgtt |
33615333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 5388841 - 5388876
Alignment:
| Q |
183 |
ggtcaacaaaaattaatatatttgattcaaaatttg |
218 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| |
|
|
| T |
5388841 |
ggtcaacaaaaattaatgtatttgattcaaaatttg |
5388876 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 15660749 - 15660702
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttg |
218 |
Q |
| |
|
|||| |||||||| |||||| |||||||| |||||||||||||||||| |
|
|
| T |
15660749 |
taagcaaaaattgatcaacacaaattaatgtatttgattcaaaatttg |
15660702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 2884268 - 2884314
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaattt |
217 |
Q |
| |
|
|||| ||||||| |||||||||||||||| |||||| |||||||||| |
|
|
| T |
2884268 |
taagtaaaaatttgtcaacaaaaattaatgtatttggttcaaaattt |
2884314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 5713318 - 5713257
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaattta |
237 |
Q |
| |
|
|||| ||||||||| |||||||| ||||| ||||||||||||| ||||||| |||||||| |
|
|
| T |
5713318 |
aaaatttggtcaaccaaaattaacgtatttaattcaaaatttgtattaaatacatcaattta |
5713257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 252
Target Start/End: Original strand, 31469083 - 31469164
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttt |
252 |
Q |
| |
|
|||| |||||||||||||||||| ||||| |||||| || ||||||||| |||||| | || || |||||||||||||| |
|
|
| T |
31469083 |
taagcaaaaattggtcaacaaaagttaatgtatttggttaaaaatttgtatcaaatacattaactttcgttgaccaattttt |
31469164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 4225062 - 4224994
Alignment:
| Q |
184 |
gtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttt |
252 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||| | | | |||| |||||||||||||||||| |||| |
|
|
| T |
4225062 |
gtcaacaaaagttatcgtatttgattcaaaatttataccagatacatcaatttatgttgaccaactttt |
4224994 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 17437219 - 17437167
Alignment:
| Q |
176 |
aaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatac |
228 |
Q |
| |
|
||||||| |||||||||||||||| ||||| |||||||||||| | |||||| |
|
|
| T |
17437219 |
aaaaatttgtcaacaaaaattaatgtatttagttcaaaatttgtaccaaatac |
17437167 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 25090012 - 25089921
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttt |
263 |
Q |
| |
|
|||| |||||||||| ||||||| || ||||||||| |||||||||||| |||||| ||| ||||||| | | |||||||| |||||||| |
|
|
| T |
25090012 |
taagcaaaaattggt-aacaaaacttcatatatttgcttcaaaatttgtatcaaatacaacaacttatgttaatccattttttcttacatttt |
25089921 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 41912171 - 41912127
Alignment:
| Q |
175 |
aaaaaattggtcaacaaaaattaatatatttgattcaaaatttgt |
219 |
Q |
| |
|
||||||||| ||||||||||||||| ||| || |||||||||||| |
|
|
| T |
41912171 |
aaaaaattgttcaacaaaaattaatgtatctggttcaaaatttgt |
41912127 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0034 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0034
Description:
Target: scaffold0034; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 94964 - 95050
Alignment:
| Q |
177 |
aaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttt |
263 |
Q |
| |
|
||||||| |||| |||||||||| |||| |||||||||||| | |||||| |||| ||||||||||||||||||| |||||||| |
|
|
| T |
94964 |
aaaattgatcaataaaaattaatgtattatgttcaaaatttgtaccaaatacatcaacttatgttgaccaattttttattacatttt |
95050 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0072 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0072
Description:
Target: scaffold0072; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 20460 - 20362
Alignment:
| Q |
171 |
taagaaaaaattggtcaacaaaaattaatatatttgattcaaaatttgttctaaatacgtcaatttatgttgaccaattttttcctacatttttgaatg |
269 |
Q |
| |
|
|||| |||||||||||| ||||||||| ||| || || ||||||||| ||||||| | ||||||||||||| |||||| | |||||||| ||||| |
|
|
| T |
20460 |
taagcaaaaattggtcagtaaaaattaacgtatgtggtttaaaatttgtattaaatacattaatttatgttgacatatttttacttacattttagaatg |
20362 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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