View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2246_low_20 (Length: 239)
Name: NF2246_low_20
Description: NF2246
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2246_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 36 - 221
Target Start/End: Original strand, 35419605 - 35419789
Alignment:
| Q |
36 |
tggaaatgggaccacatgcaagattaaatggtgagtgagttgtataacattgatcagcacgttgtatgtttttacaagtttggtagagatataaatatag |
135 |
Q |
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| T |
35419605 |
tggaaatgggaccacatgcaagattaaatggggagtaagttgtacaacactgataggcacgttgtatgtttttacaagtttggtagagatataaatatag |
35419704 |
T |
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| Q |
136 |
agcataaatgtagatacacatatcatggttagtggcaacgttatagtctacatttttatcaaagataattcccatgttaggatgtt |
221 |
Q |
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| T |
35419705 |
agcataaatgtagatatacatatcatggttagtggcaacgttattgtctaca-ttttatcaaagataattcccatgttaggatgtt |
35419789 |
T |
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