View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2249_high_11 (Length: 242)
Name: NF2249_high_11
Description: NF2249
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2249_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 37850046 - 37850218
Alignment:
| Q |
1 |
ccaattcgatcccattctcctaaaaaattgtagtgctaaaaacataacttgtccctttagtgtatggtattggtcactcagtcctataaataaaatgaat |
100 |
Q |
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| T |
37850046 |
ccaattcgatcccattctcctaaaaaattgtagtgctaaaaatataacttgtcccattagtatatggtattggtcactcagtcctataaataa----aat |
37850141 |
T |
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| Q |
101 |
gaatgaatgcagtatgatatttatatgagaatcaatggtgtgacaaaatatagcagggtgtggaaaagagaaaagta |
177 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
37850142 |
gaatgaatgcagtatgatatttatatgagaatcaatggtgtgacaaaatatagaagggtgtggaaaagagaaaagta |
37850218 |
T |
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