View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2249_low_1 (Length: 680)

Name: NF2249_low_1
Description: NF2249
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2249_low_1
NF2249_low_1
[»] chr6 (22 HSPs)
chr6 (129-671)||(7138059-7138601)
chr6 (17-370)||(7132101-7132454)
chr6 (129-368)||(7135136-7135375)
chr6 (26-290)||(6423710-6423974)
chr6 (136-346)||(19633012-19633228)
chr6 (63-274)||(6427023-6427234)
chr6 (58-325)||(8913372-8913639)
chr6 (569-655)||(8677138-8677224)
chr6 (152-274)||(6596238-6596360)
chr6 (221-318)||(6417092-6417189)
chr6 (150-287)||(10579088-10579225)
chr6 (59-291)||(6410532-6410765)
chr6 (17-318)||(7993508-7993797)
chr6 (18-120)||(6403366-6403468)
chr6 (6-96)||(6594139-6594229)
chr6 (240-289)||(28935357-28935406)
chr6 (230-287)||(6395546-6395603)
chr6 (230-290)||(14809708-14809768)
chr6 (221-288)||(6403578-6403645)
chr6 (221-288)||(6593920-6593987)
chr6 (240-275)||(9412143-9412178)
chr6 (65-139)||(10579302-10579376)
[»] chr3 (3 HSPs)
chr3 (221-323)||(51763344-51763446)
chr3 (221-318)||(13469608-13469705)
chr3 (230-280)||(1657536-1657586)
[»] chr1 (3 HSPs)
chr1 (230-346)||(19467362-19467478)
chr1 (26-186)||(33161000-33161160)
chr1 (219-301)||(7555196-7555278)
[»] chr7 (3 HSPs)
chr7 (221-355)||(10615713-10615847)
chr7 (221-325)||(10169002-10169106)
chr7 (221-325)||(10176527-10176631)
[»] chr4 (12 HSPs)
chr4 (230-279)||(553768-553817)
chr4 (230-323)||(1755562-1755655)
chr4 (221-270)||(571330-571379)
chr4 (230-262)||(1547718-1547750)
chr4 (219-267)||(3437630-3437678)
chr4 (230-285)||(2621400-2621455)
chr4 (219-305)||(21833249-21833335)
chr4 (230-303)||(661867-661940)
chr4 (59-96)||(3438186-3438223)
chr4 (219-268)||(55907684-55907733)
chr4 (233-285)||(5102326-5102378)
chr4 (247-279)||(53760291-53760323)
[»] chr8 (8 HSPs)
chr8 (237-323)||(5766559-5766645)
chr8 (221-323)||(17642889-17642991)
chr8 (237-322)||(14004159-14004244)
chr8 (221-301)||(17635632-17635712)
chr8 (221-270)||(21236154-21236203)
chr8 (230-266)||(32151977-32152013)
chr8 (230-280)||(28246055-28246105)
chr8 (233-278)||(34935986-34936031)
[»] chr2 (1 HSPs)
chr2 (219-268)||(1036620-1036669)
[»] chr5 (1 HSPs)
chr5 (237-279)||(28532829-28532871)


Alignment Details
Target: chr6 (Bit Score: 491; Significance: 0; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 491; E-Value: 0
Query Start/End: Original strand, 129 - 671
Target Start/End: Original strand, 7138059 - 7138601
Alignment:
Q  129 ttgttcaccaaagggtgaccaaggttgagttctttaagcattggaaaacaatcggcaataagtaacagatcgttgttgtagagaaacgtattggaacaat 228  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7138059 ttgtgcaccaaaaggtgaccaaggttgagttctttaagcattggaaaacaatcggcaataagtaacagatcgttgttgtagagaaacgtgttggaacaat 7138158  T
Q  229 cgagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtgtgttggttggagatactaagcgatgtgagtttctttag 328  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7138159 cgagagatgccaaagttgtaatgttttgggagaaagctcgcaacccatttgcaggaaaggtgtgttggttggagatactaagcgatgtgagtttctttag 7138258  T
Q  329 tgggaaatgagatattttgtggagaagcatgtcgaggtcaccatttccattttgtctgtccttttggtgcctaatttcgaatattactcttcttctaggc 428  Q
    |||||||||||| |||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7138259 tgggaaatgagagattttgcggagaagtatgtcgaggtcaccatttccattttgtttgtccttttggtgcctaatttcgaatattactcttcttctaggc 7138358  T
Q  429 tatggcttttacgttcatctcattcttcatttcagtatttcttcgtgtttttattgttagtttcatttctcgtcaatttgtttttctctgctagtagaga 528  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7138359 tatggcttttacgttcatctcattcttcatttcagtatttcttcgtgtttttattgttagtttcatttctcgtcaatttgtttttctctgctagtagaga 7138458  T
Q  529 tggttagagcagaagttgatgaaaaagacaatcttaaatgaatcatcagcttcacggatgcatcaagtgatgctttgtttgaagatatttgtctgaagtc 628  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  7138459 tggttagagcagaagttgatgaaaaagacgatcttaaatgaatcatcagcttcacggatgcatcaagtgatgctctctttgaagatatttgtctgaagtc 7138558  T
Q  629 tcttcgtctttaaatatttatgatgttagttaatgagcctatg 671  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  7138559 tcttcgtctttaaatatttatgatgtttgttaatgagcctatg 7138601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 17 - 370
Target Start/End: Original strand, 7132101 - 7132454
Alignment:
Q  17 caactcagaaacatgttcatcattcagaaaatatgtgcacctaagatccaaatgttgtatacatcgccacttggataacatacagtgaattccattaatg 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7132101 caactcagaaacatgttcatcattcagaaaatatgtgcacctaagattcaaatgttgtatacatcgccacttggataacatacagtgaattccattaatg 7132200  T
Q  117 aagtttgtttgattgttcaccaaagggtgaccaaggttgagttctttaagcattggaaaacaatcggcaataagtaacagatcgttgttgtagagaaacg 216  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  7132201 aagttagtttgattgttcaccaaagggtgaccaaggttgagttctttaagcattggaaaacaatcggcaataagtaacagatcgttgttgtagagaaaca 7132300  T
Q  217 tattggaacaatcgagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtgtgttggttggagatactaagcgatgt 316  Q
    | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7132301 tgttggaacaatcgagagatgccaaagttgtaatgttttgggagaaagctcgcaacccatttgcaggaaaggtgtgttggttggagatactaagcgatgt 7132400  T
Q  317 gagtttctttagtgggaaatgagatattttgtggagaagcatgtcgaggtcacc 370  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| ||||||||    
T  7132401 gagtttctttagtgggaaaggagagattttgtggagaagcatgtcaaggtcacc 7132454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 129 - 368
Target Start/End: Original strand, 7135136 - 7135375
Alignment:
Q  129 ttgttcaccaaagggtgaccaaggttgagttctttaagcattggaaaacaatcggcaataagtaacagatcgttgttgtagagaaacgtattggaacaat 228  Q
    |||| ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  7135136 ttgtgcaccaaaaggtgaccaaggttgagttctttgtgcattggaaaacaatcggcaataagtaacagatcgttgttgtagagacacgtgttggaacaat 7135235  T
Q  229 cgagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtgtgttggttggagatactaagcgatgtgagtttctttag 328  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7135236 cgagagatgccaaagttgtaatgttttgggagaaagctcgcaacccatttgcaggaaaggtgtgttggttggagatactaagcgatgtgagtttctttag 7135335  T
Q  329 tgggaaatgagatattttgtggagaagcatgtcgaggtca 368  Q
    ||||||| |||| |||||||||||||||||||| ||||||    
T  7135336 tgggaaaggagagattttgtggagaagcatgtcaaggtca 7135375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 26 - 290
Target Start/End: Original strand, 6423710 - 6423974
Alignment:
Q  26 aacatgttcatcattcagaaaatatgtgcacctaagatccaaatgttgtatacatcgccacttggataacatacagtgaattccattaatgaagtttgtt 125  Q
    |||||||| ||| |||||||||||  ||||   ||||| |||||||||||||||| | ||||||||||||| |  | |||||||||||||||| || |||    
T  6423710 aacatgttgatccttcagaaaataaatgcagtcaagattcaaatgttgtatacattgacacttggataacaaattgcgaattccattaatgaaattagtt 6423809  T
Q  126 tgattgttcaccaaagggtgaccaaggttgagttctttaagcattggaaaacaatcggcaataagtaacagatcgttgttgtagagaaacgtattggaac 225  Q
    | || | | ||||||||| |    |||||||||||||| |||| ||| ||||||| ||| | ||||||||| ||| ||||| |||||||| |  |  |||    
T  6423810 tcatcgatgaccaaagggcgtttgaggttgagttctttgagcaatgggaaacaattggccacaagtaacaggtcggtgttggagagaaacatgctataac 6423909  T
Q  226 aatcgagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtg 290  Q
    ||  |||||| ||||||||||| |||||||||||||||||||||||||||||||| |||| ||||    
T  6423910 aagtgagagaggtcaaagttgttatgttttgggagaaagctcgcaacccatttgtgggaacggtg 6423974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 136 - 346
Target Start/End: Original strand, 19633012 - 19633228
Alignment:
Q  136 ccaaagggtgaccaaggttgagttctttaagcattggaaaacaatcggcaata---agtaacagatcgttgttgtagagaaacgtattggaacaatcgag 232  Q
    ||||||||| | | |||||||||||||| | || ||| ||||||||||||||    |||||||| |||||||||||||||||| | |  |  |||  |||    
T  19633012 ccaaagggtaagcgaggttgagttctttcaacaatgggaaacaatcggcaatgttgagtaacagttcgttgttgtagagaaacatgtgagtgcaagtgag 19633111  T
Q  233 agatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtgtgttggttg---gagatactaagcgatgtgagtttctttagt 329  Q
    ||| ||||||||||||||| ||| |||||||||||||||||||||||| ||||||| |  |||||||   ||||||| ||| |||||||||||||| | |    
T  19633112 agaggtcaaagttgtaatgctttcggagaaagctcgcaacccatttgtgggaaaggggaattggttgctagagatacaaagagatgtgagtttcttcaat 19633211  T
Q  330 gggaaatgagatatttt 346  Q
    ||| || |||| |||||    
T  19633212 gggtaacgagagatttt 19633228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 63 - 274
Target Start/End: Original strand, 6427023 - 6427234
Alignment:
Q  63 tccaaatgttgtatacatcgccacttggataacatacagtgaattccattaatgaagtttgtttgattgttcaccaaagggtgaccaaggttgagttctt 162  Q
    |||||||||||||||||| | ||||||||||||||||||||||||  |||||||||||| |  | |||| | ||||||||||||   |||||||||| ||    
T  6427023 tccaaatgttgtatacatggacacttggataacatacagtgaattgaattaatgaagttaggcttattgatgaccaaagggtgatggaggttgagttgtt 6427122  T
Q  163 taagcattggaaaacaatcggcaataagtaacagatcgttgttgtagagaaacgtattggaacaatcgagagatgtcaaagttgtaatgttttgggagaa 262  Q
    | ||||  || ||||||||  ||||  || |||||||||||||  ||| ||| |||  | |||||  |||| | |||||||||||||| |||||||||||    
T  6427123 tgagcaaagggaaacaatcaacaatgggtgacagatcgttgttacagaaaaaagtaccgtaacaagtgagaaaggtcaaagttgtaatattttgggagaa 6427222  T
Q  263 agctcgcaaccc 274  Q
    | || |||||||    
T  6427223 aacttgcaaccc 6427234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 58 - 325
Target Start/End: Complemental strand, 8913639 - 8913372
Alignment:
Q  58 taagatccaaatgttgtatacatcgccacttggataacatacagtgaattccattaatgaagtttgtttgattgttcaccaaagggtgaccaaggttgag 157  Q
    ||||| |||||||||||| |||| | ||||||||||||| |  |||||||  ||||| ||  ||  | |||| ||| ||||| | ||||| |||||||||    
T  8913639 taagaaccaaatgttgtaaacattgacacttggataacaaatggtgaatttaattaaagacattactgtgatagttgaccaaggtgtgactaaggttgag 8913540  T
Q  158 ttctttaagcattggaaaacaatcggcaataagtaacagatcgttgttgtagagaaacgtattggaacaatcgagagatgtcaaagttgtaatgttttgg 257  Q
    |||||||||||  || |||||| |  |||  | |||||| | |||||| |  |||||| | |||||||||| |||||| |||||||||||||| ||||      
T  8913539 ttctttaagcaaagggaaacaaccaacaacgaataacagtttgttgttatcaagaaacatgttggaacaattgagagaggtcaaagttgtaatcttttta 8913440  T
Q  258 gagaaagctcgcaacccatttgtaggaaaggtgtgttggttggagatactaagcgatgtgagtttctt 325  Q
    || ||| || |||||||||| | |||||||||   ||||||||||||| | |||||||||||||||||    
T  8913439 gataaaactagcaacccattagcaggaaaggtccattggttggagatattgagcgatgtgagtttctt 8913372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 569 - 655
Target Start/End: Original strand, 8677138 - 8677224
Alignment:
Q  569 aatcatcagcttcacggatgcatcaagtgatgctttgtttgaagatatttgtctgaagtctcttcgtctttaaatatttatgatgtt 655  Q
    |||||||||||| ||||||||||||| |||||||||||| |||||| |||||||||||| | | |||||||||||||||| ||||||    
T  8677138 aatcatcagctttacggatgcatcaaatgatgctttgttcgaagatttttgtctgaagtttgtacgtctttaaatatttaagatgtt 8677224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 152 - 274
Target Start/End: Complemental strand, 6596360 - 6596238
Alignment:
Q  152 gttgagttctttaagcattggaaaacaatcggcaataagtaacagatcgttgttgtagagaaacgtattggaacaatcgagagatgtcaaagttgtaatg 251  Q
    |||||||||||| |||| ||| |||||||| ||||| |||||||  || || |||||||||||  |  | ||||||  |||||| ||||||||||| |||    
T  6596360 gttgagttctttgagcaatgggaaacaatcagcaatgagtaacaagtcatttttgtagagaaagtttatagaacaagtgagagaggtcaaagttgttatg 6596261  T
Q  252 ttttgggagaaagctcgcaaccc 274  Q
    |||||||||||| ||||||||||    
T  6596260 ttttgggagaaaactcgcaaccc 6596238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 6417092 - 6417189
Alignment:
Q  221 ggaacaatcgagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtgtgttggttggagatactaagcgatgtga 318  Q
    |||||||  |||||| |||||||||||| | ||||||||||||||||| |||||||||   ||||| ||| |||||||||||||| |||| |||||||    
T  6417092 ggaacaagtgagagaggtcaaagttgtattcttttgggagaaagctcgtaacccatttacgggaaaagtgggttggttggagatattaagtgatgtga 6417189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 150 - 287
Target Start/End: Complemental strand, 10579225 - 10579088
Alignment:
Q  150 aggttgagttctttaagcattggaaaacaatcggcaataagtaacagatcgttgttgtagagaaacgtattggaacaatcgagagatgtcaaagttgtaa 249  Q
    |||||||||||||| |||| ||| |||||||||||||  |||||||  || || |||||||||||   | | ||||||  || |  |||||||||||| |    
T  10579225 aggttgagttctttgagcaatgggaaacaatcggcaacgagtaacaagtcatttttgtagagaaagtcagtagaacaagtgaaacttgtcaaagttgtta 10579126  T
Q  250 tgttttgggagaaagctcgcaacccatttgtaggaaag 287  Q
    ||||||||||||||||||| ||||||| ||| ||||||    
T  10579125 tgttttgggagaaagctcgtaacccatctgtgggaaag 10579088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 291
Target Start/End: Original strand, 6410532 - 6410765
Alignment:
Q  59 aagatccaaatgttgtatacatcgccacttggataacatacagtgaattccattaatgaagtttgtttgattgttcaccaaagggtgaccaaggtt-gag 157  Q
    |||||||| |||||||| |||| | ||||||||||||| | ||||||||||||||||||| || | | |||  || | | ||||||||   ||||| |||    
T  6410532 aagatccatatgttgtaaacattggcacttggataacagatagtgaattccattaatgaaattagatcgatacttgaacgaagggtgaatgaggtttgag 6410631  T
Q  158 ttctttaagcattggaaaacaatcggcaataagtaacagatcgttgttgtagagaaacgtattggaacaatcgagagatgtcaaagttgtaatgttttgg 257  Q
    |||||| |||| ||| |||||||| ||||  |||| ||| | |||||| |  |  |||   | ||  |||  || ||| |||||||||||||||||||||    
T  6410632 ttctttgagcaatgggaaacaatcagcaaagagtatcaggttgttgttatcaaataacacgtaggggcaagtgaaagaggtcaaagttgtaatgttttgg 6410731  T
Q  258 gagaaagctcgcaacccatttgtaggaaaggtgt 291  Q
    |||||| || ||||||||||| | ||||||||||    
T  6410732 gagaaaacttgcaacccatttatgggaaaggtgt 6410765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 318
Target Start/End: Complemental strand, 7993797 - 7993508
Alignment:
Q  17 caactcagaaacatgttcatcattcagaaaatatgtgcacctaagatccaaatgttgtatacatcgccacttggataacatacagtgaattccattaatg 116  Q
    |||||||| |||||||  |||||||||||||||  | |   ||||||| ||||||||||||||||| |||||||| |||| | |||||| | ||||||||    
T  7993797 caactcagcaacatgtagatcattcagaaaataaataccattaagatctaaatgttgtatacatcgacacttggacaacaaatagtgaaattcattaatg 7993698  T
Q  117 aagtttgtttgattgttcaccaaagggtgaccaaggttgagttctttaagcattggaaaacaatcggcaataagtaacagatcgttgttgtagagaaacg 216  Q
     || | || | |||||            |||| |||||||||||||| ||||  || ||||||| |||||| ||||||||  ||   ||    ||||| |    
T  7993697 tagctagtgtcattgt------------gaccgaggttgagttctttgagcaaagggaaacaattggcaatgagtaacaggccgcccttaccaagaaaag 7993610  T
Q  217 tattggaacaatcgagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtgtgttggttggagatactaagcgatgt 316  Q
    |||||||||||| |||||| |||||| |||||||||||||||  || |||||||| ||||  |  |||||| ||  ||||| ||||||| |||| |||||    
T  7993609 tattggaacaattgagagaggtcaaaattgtaatgttttgggcaaatgctcgcaaaccataggcgggaaagttgcattggtcggagatattaagggatgt 7993510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 6403366 - 6403468
Alignment:
Q  18 aactcagaaacatgttcatcattcagaaaatatgtgcacctaagatccaaatgttgtatacatcgccacttggataacatacagtgaattccattaatga 117  Q
    ||||||| |||||||  |||||||||||||||  ||    ||||||||||||||||||||||||  ||||||||||||| | |||  ||||||||||| |    
T  6403366 aactcagcaacatgtaaatcattcagaaaataactgttattaagatccaaatgttgtatacatctacacttggataacagagagtatattccattaataa 6403465  T
Q  118 agt 120  Q
    |||    
T  6403466 agt 6403468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 6594229 - 6594139
Alignment:
Q  6 agaagcaaaggcaactcagaaacatgttcatcattcagaaaatatgtgcacctaagatccaaatgttgtatacatcgccacttggataaca 96  Q
    |||| ||||| |||||| | |||||||| |||||||||||||   | | || |||||| |||||||||||||||||| |||||||||||||    
T  6594229 agaaacaaagacaactcggcaacatgttgatcattcagaaaacgagcgtacttaagattcaaatgttgtatacatcgacacttggataaca 6594139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 28935357 - 28935406
Alignment:
Q  240 aaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggt 289  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||||||||    
T  28935357 aaagttgtaatgttttgggagaaggctcgcaacccttttgtgggaaaggt 28935406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 6395546 - 6395603
Alignment:
Q  230 gagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaag 287  Q
    |||||| |||||||||||||| |||||||||| |||| ||||||||| ||| ||||||    
T  6395546 gagagaggtcaaagttgtaatattttgggagagagcttgcaacccatctgtgggaaag 6395603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 14809708 - 14809768
Alignment:
Q  230 gagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtg 290  Q
    |||||| | ||||||||||||||||||||||||| || ||||||| ||||  |||||||||    
T  14809708 gagagaggccaaagttgtaatgttttgggagaaatcttgcaacccttttgcgggaaaggtg 14809768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 288
Target Start/End: Original strand, 6403578 - 6403645
Alignment:
Q  221 ggaacaatcgagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaagg 288  Q
    ||||||||| ||||| |||||||| || |  ||| |||||||||||||||||||||| || |||||||    
T  6403578 ggaacaatcaagagaggtcaaagtagtgacctttcgggagaaagctcgcaacccattagtgggaaagg 6403645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 288
Target Start/End: Complemental strand, 6593987 - 6593920
Alignment:
Q  221 ggaacaatcgagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaagg 288  Q
    |||||||| || ||| |||||||||||||| ||||| |||||| ||||||| |||||||  |||||||    
T  6593987 ggaacaattgaaagaggtcaaagttgtaatcttttgtgagaaaactcgcaaaccatttgagggaaagg 6593920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 275
Target Start/End: Original strand, 9412143 - 9412178
Alignment:
Q  240 aaagttgtaatgttttgggagaaagctcgcaaccca 275  Q
    ||||||||||| ||||||||||||||||||||||||    
T  9412143 aaagttgtaatattttgggagaaagctcgcaaccca 9412178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 65 - 139
Target Start/End: Complemental strand, 10579376 - 10579302
Alignment:
Q  65 caaatgttgtatacatcgccacttggataacatacagtgaattccattaatgaagtttgtttgattgttcaccaa 139  Q
    ||||||||| |||||| | ||||| ||||||| | ||||||||||||||||||| |  ||| ||||||| |||||    
T  10579376 caaatgttgaatacatggacactttgataacagagagtgaattccattaatgaaatcagttcgattgttgaccaa 10579302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 7e-20; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 221 - 323
Target Start/End: Complemental strand, 51763446 - 51763344
Alignment:
Q  221 ggaacaatcgagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtgtgttggttggagatactaagcgatgtgagt 320  Q
    |||||||  ||||||||||||||||||||| ||||| || ||| |||||||||||||||||||||||||  | || ||||||| | |||| |||||||||    
T  51763446 ggaacaagtgagagatgtcaaagttgtaatcttttgtgaaaaaactcgcaacccatttgtaggaaaggtaagctgtttggagagattaagtgatgtgagt 51763347  T
Q  321 ttc 323  Q
    |||    
T  51763346 ttc 51763344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 221 - 318
Target Start/End: Complemental strand, 13469705 - 13469608
Alignment:
Q  221 ggaacaatcgagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtgtgttggttggagatactaagcgatgtga 318  Q
    |||||||  |||||| ||||  |||||| | ||||||||||||||||| |||||||||| |||||  ||| |||||||||||| | |||| |||||||    
T  13469705 ggaacaagtgagagaggtcagcgttgtattcttttgggagaaagctcgtaacccatttgcaggaacagtgggttggttggagagattaagtgatgtga 13469608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 230 - 280
Target Start/End: Original strand, 1657536 - 1657586
Alignment:
Q  230 gagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgt 280  Q
    |||||| || |||||| |||||||||| ||||||||| |||||||||||||    
T  1657536 gagagaggttaaagttttaatgttttgagagaaagcttgcaacccatttgt 1657586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 1e-18; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 230 - 346
Target Start/End: Complemental strand, 19467478 - 19467362
Alignment:
Q  230 gagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtgtgttggttggagatactaagcgatgtgagtttctttagt 329  Q
    |||||| |||||||||||||| ||||| | |||| |||||||||||||||  |||| |||||||  |||||||||| | || ||||||||||| || | |    
T  19467478 gagagaggtcaaagttgtaatattttgagtgaaaactcgcaacccatttgcgggaatggtgtgtctgttggagataatgagagatgtgagttttttcaat 19467379  T
Q  330 gggaaatgagatatttt 346  Q
    ||||||||||| |||||    
T  19467378 gggaaatgagagatttt 19467362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 26 - 186
Target Start/End: Original strand, 33161000 - 33161160
Alignment:
Q  26 aacatgttcatcattcagaaaatatgtgcacctaagatccaaatgttgtatacatcgccacttggataacatacagtgaattccattaatgaagtttgtt 125  Q
    |||||||| ||||||||||||||| |||    | |||||||||| ||||||| || | || |||||||| | | |||||| ||||||||||||||| ||     
T  33161000 aacatgttgatcattcagaaaataagtgtgatttagatccaaatattgtatatattgacagttggataagagagagtgaaatccattaatgaagttagtg 33161099  T
Q  126 tgattgttcaccaaagggtgaccaaggttgagttctttaagcattggaaaacaatcggcaa 186  Q
    |||||||| | |  ||||||||| |||||||||| ||| ||||  || |||||||||||||    
T  33161100 tgattgttgaactgagggtgaccgaggttgagttttttgagcaaagggaaacaatcggcaa 33161160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 219 - 301
Target Start/End: Original strand, 7555196 - 7555278
Alignment:
Q  219 ttggaacaatcgagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtgtgttggttgga 301  Q
    |||||||||  ||| || || ||||||||||| |||||||||||||||||||| ||| ||| ||| | |||| ||||||||||    
T  7555196 ttggaacaagtgagtgaggttaaagttgtaatattttgggagaaagctcgcaatccaattgcagggatggtgggttggttgga 7555278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 2e-17; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 221 - 355
Target Start/End: Original strand, 10615713 - 10615847
Alignment:
Q  221 ggaacaatcgagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtgtgttggttggagatactaagcgatgtgagt 320  Q
    |||||||  |||||| |||||||||||||| ||||||||||||||||| ||||||||||  ||||  ||| |||||||||| ||| |||| |||||||      
T  10615713 ggaacaagtgagagaggtcaaagttgtaatcttttgggagaaagctcgtaacccatttgcgggaactgtgggttggttggaaatattaagtgatgtgatg 10615812  T
Q  321 ttctttagtgggaaatgagatattttgtggagaag 355  Q
    |||  |  ||||||| |||| |||||| |||||||    
T  10615813 ttcaatgatgggaaacgagagattttgcggagaag 10615847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 221 - 325
Target Start/End: Complemental strand, 10169106 - 10169002
Alignment:
Q  221 ggaacaatcgagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtgtgttggttggagatactaagcgatgtgagt 320  Q
    |||||||  |||||| ||||||||| |||| ||||| |||||| |||||||||||||||  |||| ||||  ||||| ||| |||   || |||||||||    
T  10169106 ggaacaagtgagagaggtcaaagttctaatattttgagagaaaactcgcaacccatttgcgggaatggtgcattggtaggaaatatcgagtgatgtgagt 10169007  T
Q  321 ttctt 325  Q
    |||||    
T  10169006 ttctt 10169002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 221 - 325
Target Start/End: Complemental strand, 10176631 - 10176527
Alignment:
Q  221 ggaacaatcgagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtgtgttggttggagatactaagcgatgtgagt 320  Q
    |||||||  |||||| ||||||||| |||| ||||| |||||| |||||||||||||||  |||| ||||  ||||| ||| |||   || |||||||||    
T  10176631 ggaacaagtgagagaggtcaaagttctaatattttgagagaaaactcgcaacccatttgcgggaatggtgcattggtaggaaatatcgagtgatgtgagt 10176532  T
Q  321 ttctt 325  Q
    |||||    
T  10176531 ttctt 10176527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 7e-17; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 553768 - 553817
Alignment:
Q  230 gagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttg 279  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  553768 gagagaggtcaaagttgtaatgttttgggagaaagctcgcaacccatttg 553817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 230 - 323
Target Start/End: Original strand, 1755562 - 1755655
Alignment:
Q  230 gagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtgtgttggttggagatactaagcgatgtgagtttc 323  Q
    |||||| |||||||||||||| ||||| ||||||||| ||||||| || || |||| || |||||||||||||| | ||| |||||| ||||||    
T  1755562 gagagaggtcaaagttgtaatcttttgagagaaagcttgcaaccctttggtgggaatggcgtgttggttggagagattaaacgatgtaagtttc 1755655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 571330 - 571379
Alignment:
Q  221 ggaacaatcgagagatgtcaaagttgtaatgttttgggagaaagctcgca 270  Q
    |||||||| ||||||||||||||||||||| ||||||||||| |||||||    
T  571330 ggaacaattgagagatgtcaaagttgtaatattttgggagaatgctcgca 571379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 1547750 - 1547718
Alignment:
Q  230 gagagatgtcaaagttgtaatgttttgggagaa 262  Q
    |||||||||||||||||||||||||||||||||    
T  1547750 gagagatgtcaaagttgtaatgttttgggagaa 1547718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 3437678 - 3437630
Alignment:
Q  219 ttggaacaatcgagagatgtcaaagttgtaatgttttgggagaaagctc 267  Q
    |||||||||  |||||| |||||||||||||| ||||||||||||||||    
T  3437678 ttggaacaactgagagaggtcaaagttgtaatcttttgggagaaagctc 3437630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 230 - 285
Target Start/End: Complemental strand, 2621455 - 2621400
Alignment:
Q  230 gagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaa 285  Q
    ||||||||||||| || | || |||| |||||||||||||||||||| ||||||||    
T  2621455 gagagatgtcaaatttttcatatttttggagaaagctcgcaacccatctgtaggaa 2621400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 219 - 305
Target Start/End: Complemental strand, 21833335 - 21833249
Alignment:
Q  219 ttggaacaatcgagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtgtgttggttggagata 305  Q
    |||||||||  |||||| |||||||| ||||||||||| |  ||| |||||||||||| ||  |||| |||| ||| ||||||||||    
T  21833335 ttggaacaagtgagagaggtcaaagtagtaatgttttgtgcaaaaactcgcaacccatctgcgggaatggtgggtttgttggagata 21833249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 303
Target Start/End: Original strand, 661867 - 661940
Alignment:
Q  230 gagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtgtgttggttggaga 303  Q
    |||||| || ||||||||||| | |||||||||||||||||| ||||| |  |||| ||||  |||||||||||    
T  661867 gagagaggttaaagttgtaatatattgggagaaagctcgcaaaccattagcgggaatggtggtttggttggaga 661940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 3438223 - 3438186
Alignment:
Q  59 aagatccaaatgttgtatacatcgccacttggataaca 96  Q
    |||||||||||||||||||||| | |||||||||||||    
T  3438223 aagatccaaatgttgtatacattgacacttggataaca 3438186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 55907733 - 55907684
Alignment:
Q  219 ttggaacaatcgagagatgtcaaagttgtaatgttttgggagaaagctcg 268  Q
    |||||||||  ||||||  ||||||||||||| |||||||||||||||||    
T  55907733 ttggaacaaatgagagaattcaaagttgtaatattttgggagaaagctcg 55907684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 233 - 285
Target Start/End: Complemental strand, 5102378 - 5102326
Alignment:
Q  233 agatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaa 285  Q
    |||||||||| || | || ||||||||||| ||||||||||| ||||||||||    
T  5102378 agatgtcaaatttttcatcttttgggagaatgctcgcaacccttttgtaggaa 5102326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 247 - 279
Target Start/End: Complemental strand, 53760323 - 53760291
Alignment:
Q  247 taatgttttgggagaaagctcgcaacccatttg 279  Q
    ||||||||||| |||||||||||||||||||||    
T  53760323 taatgttttggaagaaagctcgcaacccatttg 53760291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 237 - 323
Target Start/End: Complemental strand, 5766645 - 5766559
Alignment:
Q  237 gtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtgtgttggttggagatactaagcgatgtgagtttc 323  Q
    ||||||||||||||||| || |||||||||||||| ||||| | ||||| | || |||||||||| | | | |||||||||||||||    
T  5766645 gtcaaagttgtaatgttctgagagaaagctcgcaaaccattagcaggaaggatgagttggttggaaagattgagcgatgtgagtttc 5766559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 221 - 323
Target Start/End: Complemental strand, 17642991 - 17642889
Alignment:
Q  221 ggaacaatcgagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtgtgttggttggagatactaagcgatgtgagt 320  Q
    |||||||  |||||| |||||||||||||| || |||||||||||| | |||||||| || |||| |||| | |||||||||| | | || |||||||||    
T  17642991 ggaacaagtgagagaggtcaaagttgtaatattctgggagaaagcttgtaacccattggtgggaatggtgagatggttggagagattgagtgatgtgagt 17642892  T
Q  321 ttc 323  Q
    |||    
T  17642891 ttc 17642889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 14004159 - 14004244
Alignment:
Q  237 gtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtgtgttggttggagatactaagcgatgtgagttt 322  Q
    ||||||||||||||||| || |||||||||||||| ||||| | ||||| | || |||||||||| | | | ||||||||||||||    
T  14004159 gtcaaagttgtaatgttctgagagaaagctcgcaaaccattagcaggaaggatgggttggttggaaagattgagcgatgtgagttt 14004244  T

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Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 301
Target Start/End: Complemental strand, 17635712 - 17635632
Alignment:
Q  221 ggaacaatcgagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgtaggaaaggtgtgttggttgga 301  Q
    |||||||  |||||| |||||||||||||| ||  ||||||||||||| |||||||| || |||| |||| ||||||||||    
T  17635712 ggaacaagtgagagaggtcaaagttgtaatattccgggagaaagctcgtaacccattagttggaatggtgagttggttgga 17635632  T

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Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 21236154 - 21236203
Alignment:
Q  221 ggaacaatcgagagatgtcaaagttgtaatgttttgggagaaagctcgca 270  Q
    |||||||| ||||||||||||||||||| | ||||||||||| |||||||    
T  21236154 ggaacaattgagagatgtcaaagttgtagtattttgggagaatgctcgca 21236203  T

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Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 32151977 - 32152013
Alignment:
Q  230 gagagatgtcaaagttgtaatgttttgggagaaagct 266  Q
    |||||| ||||||||||||||||||||||||||||||    
T  32151977 gagagaggtcaaagttgtaatgttttgggagaaagct 32152013  T

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Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 230 - 280
Target Start/End: Complemental strand, 28246105 - 28246055
Alignment:
Q  230 gagagatgtcaaagttgtaatgttttgggagaaagctcgcaacccatttgt 280  Q
    |||||| || |||||| |||||||||| ||||||||| |||||||||||||    
T  28246105 gagagaggttaaagttttaatgttttgagagaaagcttgcaacccatttgt 28246055  T

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Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 34936031 - 34935986
Alignment:
Q  233 agatgtcaaagttgtaatgttttgggagaaagctcgcaacccattt 278  Q
    |||||||||||||||||| ||||| |||||| ||||||| ||||||    
T  34936031 agatgtcaaagttgtaatattttgtgagaaaactcgcaaaccattt 34935986  T

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Target: chr2 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 1036669 - 1036620
Alignment:
Q  219 ttggaacaatcgagagatgtcaaagttgtaatgttttgggagaaagctcg 268  Q
    |||||||||  |||||| |||||||||||||| |||||||||||||||||    
T  1036669 ttggaacaaatgagagaagtcaaagttgtaatattttgggagaaagctcg 1036620  T

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Target: chr5 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 279
Target Start/End: Original strand, 28532829 - 28532871
Alignment:
Q  237 gtcaaagttgtaatgttttgggagaaagctcgcaacccatttg 279  Q
    |||||||||||||||||||| || ||||||||||| |||||||    
T  28532829 gtcaaagttgtaatgttttgtgaaaaagctcgcaatccatttg 28532871  T

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