View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2251_low_14 (Length: 249)
Name: NF2251_low_14
Description: NF2251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2251_low_14 |
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Alignment Details
Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 6 - 238
Target Start/End: Complemental strand, 11180509 - 11180276
Alignment:
| Q |
6 |
cgatgaaaacttcgtacgtttaacatggtaatcgaaataaagannnnnnnnn-gtctcatttctccttgtctatcaataagggcttgatgaattcttgtt |
104 |
Q |
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| T |
11180509 |
cgatgaaaacttcgtacgtttaacatggtaatccaaataaagattttttttttgtctcatttctccttgtctatcaataagggcttgaggaattcttgtt |
11180410 |
T |
|
| Q |
105 |
gatgtattaaatatgagcttgaaagttccatattagatgagaaagtgagaaacaaattcaatgctataaatgtgggacacagtttttaatgttgattgtt |
204 |
Q |
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| T |
11180409 |
gatgtattaaatatgagcttgaaagttccatattagatgagaaagtgagaaacaagttcaatgctataaatgtgggacacagtttttaatgttgattgtt |
11180310 |
T |
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| Q |
205 |
cgattaacatacaagatggttttattttgatttt |
238 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
11180309 |
cgattaacatacaagatggttttattttgatttt |
11180276 |
T |
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