View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2251_low_19 (Length: 208)
Name: NF2251_low_19
Description: NF2251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2251_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 34176406 - 34176575
Alignment:
| Q |
17 |
cagagatttgtcagcaaagtaccaagccaactgcagaaatgaagagagtaaaaacagagatctgtcattgaaagagtaaagtgctgccatgccagctgca |
116 |
Q |
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| T |
34176406 |
cagagatctgtcagcaaagtaccaagccaagtgcagaaatgaagagagtaaaaacagagatctgtcattgaaagagtaaagtgc-----tgccagctgca |
34176500 |
T |
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| Q |
117 |
cgaacagaacagagtcaaatactgcgacttaatcaaaagtcttcaaatgttggaaagtaagagagagaaacgaac |
191 |
Q |
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||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34176501 |
cgaacagaacagaatcagaaactgcgacttaatcaaaagtcttcaaatgttggaaagtaagagagagaaacgaac |
34176575 |
T |
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