View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2251_low_5 (Length: 342)
Name: NF2251_low_5
Description: NF2251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2251_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 21787906 - 21788231
Alignment:
| Q |
1 |
ttatttttctttgaatgagcactatctaccactgctaaagtgcaaagagaagatcatgaagttgtactattcaatttaaaatcaaggcagccaccgtcca |
100 |
Q |
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| T |
21787906 |
ttatttttctttgaatgagcactatctatcaccgctaaagtgcaaagtgaagatcatgaagttgtactattcaatataaaatcaaggcagccaccgtcca |
21788005 |
T |
|
| Q |
101 |
gtgaaacagtcactctcatattacaccggctaaaacaaaaataattatatatcatcactttaattattagtatatgattaaaacgtggtgcactctcagc |
200 |
Q |
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| T |
21788006 |
gtgaaacagtcactctcatattacaccggctaaaacaaaaataattatatatcatcactttaattattagtatatgattaaaacgtggtgcactctcagc |
21788105 |
T |
|
| Q |
201 |
cataacatcatactttgtgttccaaaaatgaagtccaaatttttatgacgatcacaaatctgtcattatattcattatagaatatagaataatttttata |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |
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| T |
21788106 |
cataacatcatactttgtgttccaaaaatgaagtccaaatttttatgacgatcacaaatctgtcattatactcattatagaacatagaataatttttata |
21788205 |
T |
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| Q |
301 |
gacattataacttcatgctgagatct |
326 |
Q |
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|||||||||||||||||||||||||| |
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| T |
21788206 |
gacattataacttcatgctgagatct |
21788231 |
T |
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