View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2252_high_17 (Length: 295)
Name: NF2252_high_17
Description: NF2252
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2252_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 14 - 276
Target Start/End: Complemental strand, 41702792 - 41702530
Alignment:
| Q |
14 |
agacatccgaaaccaacataaaccaaccaaaaacacctgctgctatcagagagccgaacagcagcaccagcagctgctgaaacctgcataaaacaacagc |
113 |
Q |
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| T |
41702792 |
agacatccgaaaccaacataaaccaaccaaaaacacctgctgctatcagagagccgaacagcagcaccagcagctgctgaaacctgcataaaacaacagc |
41702693 |
T |
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| Q |
114 |
ttcggctgcaaagcagcgcccaaacctccctgcactgtcaagaaccagcagcagctgccactatgacagcaacacagcagaccaagcacacggcaacaca |
213 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
41702692 |
ttcggctgcaaagcagcgcccaaacctccctgcgctgtcaagaaccagcagcagctgccactatgacagcaacacagcagaccaagcacgcggcaacaca |
41702593 |
T |
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| Q |
214 |
actgccaaagacagacaccgcaccaaaccagacctcgcaacagcaccaaccccctgaacctcc |
276 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41702592 |
actgccaaagacagacaccgcaccaaaccagacctcgcaacagcaccaaccccctgaacctcc |
41702530 |
T |
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