View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2252_high_19 (Length: 250)
Name: NF2252_high_19
Description: NF2252
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2252_high_19 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 13 - 250
Target Start/End: Complemental strand, 42884648 - 42884411
Alignment:
| Q |
13 |
aatatctatggagttcaccaaccgaattacaattaaatgaaaattttcccgatatttgttttttgagcaaccgataagttattagttaccgttaccacac |
112 |
Q |
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| T |
42884648 |
aatatctatggagtttaccaaccgaattacaattaaatgaaaattttccggatatttgttttttgagcaaccgataagttattagttaccgttaccacac |
42884549 |
T |
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| Q |
113 |
aacttataattcataaatatgtgtaccatgctaccagcaaaaagaagtgcgaaaataaatacacaacaaaatcatagtaccgtgtaatgaaaaataatgt |
212 |
Q |
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| T |
42884548 |
aacttttaattcataaatatgtgtaccatgctaccagcaaaaagaagtgcgaaaataaatacacaacaaaatcatagtaccgtgtaatgaaaaataatgt |
42884449 |
T |
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| Q |
213 |
aaagatcagttgtagtttaaattaatttgcacgtactt |
250 |
Q |
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| T |
42884448 |
aaagatcagttgtagtttaaattaatttgcacgtactt |
42884411 |
T |
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