View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2254_low_1 (Length: 466)

Name: NF2254_low_1
Description: NF2254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2254_low_1
NF2254_low_1
[»] chr1 (13 HSPs)
chr1 (13-449)||(19345662-19346098)
chr1 (200-319)||(13609485-13609604)
chr1 (200-319)||(20367381-20367500)
chr1 (139-319)||(13542136-13542316)
chr1 (200-319)||(13419796-13419915)
chr1 (200-319)||(13504914-13505033)
chr1 (200-319)||(13648964-13649083)
chr1 (200-319)||(15900296-15900415)
chr1 (200-319)||(20476453-20476572)
chr1 (200-314)||(16497598-16497712)
chr1 (208-319)||(13683590-13683701)
chr1 (208-289)||(19139959-19140040)
chr1 (208-319)||(13669491-13669602)
[»] chr6 (1 HSPs)
chr6 (80-317)||(22285084-22285321)
[»] scaffold0068 (1 HSPs)
scaffold0068 (139-402)||(42147-42410)
[»] scaffold0012 (1 HSPs)
scaffold0012 (200-319)||(114699-114818)
[»] scaffold0006 (2 HSPs)
scaffold0006 (200-319)||(138145-138264)
scaffold0006 (208-319)||(167105-167216)
[»] chr8 (1 HSPs)
chr8 (200-319)||(20815822-20815941)
[»] scaffold0406 (1 HSPs)
scaffold0406 (200-319)||(9259-9378)
[»] scaffold0069 (1 HSPs)
scaffold0069 (200-319)||(25387-25506)
[»] chr2 (1 HSPs)
chr2 (200-319)||(38058796-38058915)


Alignment Details
Target: chr1 (Bit Score: 405; Significance: 0; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 13 - 449
Target Start/End: Original strand, 19345662 - 19346098
Alignment:
Q  13 aaaatagtgcaggaacatacatctccaacctttgatgcttcagctcattcttggaagatttcgactcataagagaagaaattatcaagtttgggcaaatg 112  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19345662 aaaatagtgcaggaacatacatctccaacctttgatgcttccgctcattcttggaagacttcgactcataagagaagaaattatcaagtttgggcaaatg 19345761  T
Q  113 ttctaaaatcagagaatgcaaagaaggaaactcgaatttttcattagttatgtcattatctccacttgaatcacgatcttctagtattatctccgtcata 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19345762 ttctaaaatcagagaatgcaaagaaggaaactcgaatttttcattagttatgtcattatctccacttgaatcacgatcttcgagtattatctccgtcata 19345861  T
Q  213 gaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaattgttgactttga 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19345862 gaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaattgttgactttga 19345961  T
Q  313 taacacttagcttgccaaaggaattagcttcaagtcggccatgacatattcgcttcaaatttttaagattcttaagtacaagtttttccagattgataaa 412  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||    
T  19345962 taacactaagctttccaaaggaattagcttcaagtcggccatgacatattcgctccaaatttttaagattctcaagtagaagtttttccagattgataaa 19346061  T
Q  413 gcaaacttggactgtattcctctctgtggagtcaact 449  Q
    |||||||||||||||||||||||||||||||||||||    
T  19346062 gcaaacttggactgtattcctctctgtggagtcaact 19346098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 200 - 319
Target Start/End: Complemental strand, 13609604 - 13609485
Alignment:
Q  200 tatctccgtcatagaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaa 299  Q
    ||||||| |||||||| |||| | |||||||| ||||| | |||| |||||||||||  ||||||||| | |||||| |||||| ||||||||||| |||    
T  13609604 tatctccttcatagaattgcactcacaaacttcaatcttacaaaggtgagaaagtcctttaaccattgtaaaggagaaaagatactttaattggacgcaa 13609505  T
Q  300 ttgttgactttgataacact 319  Q
    || || ||||||||||||||    
T  13609504 ttttttactttgataacact 13609485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 200 - 319
Target Start/End: Complemental strand, 20367500 - 20367381
Alignment:
Q  200 tatctccgtcatagaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaa 299  Q
    ||||||| |||||||| |||| | |||||||| ||||| |||||| |||||||||||  ||||||||| | |||||| |||||| ||||| ||||| |||    
T  20367500 tatctccttcatagaattgcactcacaaacttcaatcttagaaaggtgagaaagtcctttaaccattgtaaaggagaaaagatactttaactggacgcaa 20367401  T
Q  300 ttgttgactttgataacact 319  Q
    || || ||||||||||||||    
T  20367400 ttttttactttgataacact 20367381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 139 - 319
Target Start/End: Complemental strand, 13542316 - 13542136
Alignment:
Q  139 gaaactcgaatttttcattagttatgtcattatctccacttgaatcacgatcttctagtattatctccgtcatagaagtgcattgacaaactttaatctc 238  Q
    ||||||| | |||||||| |||||| ||||||| | |||||||||     ||||| |  | ||| ||| |||||||| |||| |||||||||| |||||     
T  13542316 gaaactcaattttttcatcagttatatcattatttgcacttgaattgttgtcttcaaacactatttccttcatagaattgcactgacaaacttcaatctt 13542217  T
Q  239 agaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaattgttgactttgataacact 319  Q
    |||||  ||||||||| |  |||||| || ||||||||  ||||||||||||||||  ||||| |||||||||||||||||    
T  13542216 agaaatttgagaaagttctttaaccactgcataggagaatagatattttaattggatgcaatttttgactttgataacact 13542136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 319
Target Start/End: Complemental strand, 13419915 - 13419796
Alignment:
Q  200 tatctccgtcatagaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaa 299  Q
    ||||||| |||||||| |||| | |||||||| ||||| | |||| |||||||||||  ||||||||| | |||||| |||||| ||||| ||||| |||    
T  13419915 tatctccttcatagaattgcactcacaaacttcaatcttacaaaggtgagaaagtcctttaaccattgtaaaggagaaaagatactttaactggacgcaa 13419816  T
Q  300 ttgttgactttgataacact 319  Q
    || || ||||||||||||||    
T  13419815 ttttttactttgataacact 13419796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 319
Target Start/End: Complemental strand, 13505033 - 13504914
Alignment:
Q  200 tatctccgtcatagaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaa 299  Q
    ||||||| |||||||| |||| | |||||||| ||||| | |||| |||||||||||  ||||||||| | |||||| |||||| ||||| ||||| |||    
T  13505033 tatctccttcatagaattgcactcacaaacttcaatcttacaaaggtgagaaagtcctttaaccattgtaaaggagaaaagatactttaactggacgcaa 13504934  T
Q  300 ttgttgactttgataacact 319  Q
    || || ||||||||||||||    
T  13504933 ttttttactttgataacact 13504914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 319
Target Start/End: Complemental strand, 13649083 - 13648964
Alignment:
Q  200 tatctccgtcatagaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaa 299  Q
    ||||||| |||||||| |||| | |||||||| ||||| | |||| |||||||||||  ||||||||| | |||||| |||||| ||||| ||||| |||    
T  13649083 tatctccttcatagaattgcactcacaaacttcaatcttacaaaggtgagaaagtcctttaaccattgtaaaggagaaaagatactttaactggacgcaa 13648984  T
Q  300 ttgttgactttgataacact 319  Q
    || || ||||||||||||||    
T  13648983 ttttttactttgataacact 13648964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 319
Target Start/End: Original strand, 15900296 - 15900415
Alignment:
Q  200 tatctccgtcatagaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaa 299  Q
    ||||||| |||||||| ||||  ||||||||| ||||| |||||  || |||||| |  ||||||||| | ||||||  |||||||||||||||||||||    
T  15900296 tatctccttcatagaattgcaccgacaaacttcaatcttagaaatgtgggaaagttctttaaccattgcagaggagaatagatattttaattggacacaa 15900395  T
Q  300 ttgttgactttgataacact 319  Q
    || || ||||||||||||||    
T  15900396 ttttttactttgataacact 15900415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 319
Target Start/End: Complemental strand, 20476572 - 20476453
Alignment:
Q  200 tatctccgtcatagaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaa 299  Q
    ||||||| |||||||| |||| | |||||||| ||||| | |||| |||||||||||  ||||||||| | |||||| |||||| ||||| ||||| |||    
T  20476572 tatctccttcatagaattgcactcacaaacttcaatcttacaaaggtgagaaagtcctttaaccattgtaaaggagaaaagatactttaactggacgcaa 20476473  T
Q  300 ttgttgactttgataacact 319  Q
    || || ||||||||||||||    
T  20476472 ttttttactttgataacact 20476453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 200 - 314
Target Start/End: Original strand, 16497598 - 16497712
Alignment:
Q  200 tatctccgtcatagaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaa 299  Q
    ||||||| |||||||| |||||  |||||||| || || |||||| ||  |||||||  || |||||| | ||| || || |||||||||||||||||||    
T  16497598 tatctccttcatagaattgcatccacaaacttcaaccttagaaaggtggaaaagtcctttagccattgtaaaggtgaaaatatattttaattggacacaa 16497697  T
Q  300 ttgttgactttgata 314  Q
    || ||||||||||||    
T  16497698 tttttgactttgata 16497712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 319
Target Start/End: Complemental strand, 13683701 - 13683590
Alignment:
Q  208 tcatagaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaattgttgac 307  Q
    |||||||| |||| | |||||||| ||||| | |||| |||||||||||  ||||||||| | ||||||  ||||| ||||| ||||  ||||| || ||    
T  13683701 tcatagaattgcactcacaaacttcaatcttacaaaggtgagaaagtcctttaaccattgtaaaggagaagagatactttaactggatgcaattttttac 13683602  T
Q  308 tttgataacact 319  Q
    ||||||||||||    
T  13683601 tttgataacact 13683590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 19139959 - 19140040
Alignment:
Q  208 tcatagaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagagaagatattttaa 289  Q
    |||||||| |||| |||||||||| ||||| | |||| |||||||||||  | ||||||| | |||||| ||||||||||||    
T  19139959 tcatagaattgcactgacaaacttcaatcttacaaaggtgagaaagtcctttcaccattgtaaaggagaaaagatattttaa 19140040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 319
Target Start/End: Complemental strand, 13669602 - 13669491
Alignment:
Q  208 tcatagaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaattgttgac 307  Q
    |||||||| |||| | |||||||||||||| |||||  ||  ||||| |  |||||| || ||| ||||  | ||||||||||||||| || || |||||    
T  13669602 tcatagaattgcactcacaaactttaatcttagaaatgtggtaaagttctttaaccactggatatgagaatatatattttaattggacgcagtttttgac 13669503  T
Q  308 tttgataacact 319  Q
    ||||||||||||    
T  13669502 tttgataacact 13669491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 80 - 317
Target Start/End: Original strand, 22285084 - 22285321
Alignment:
Q  80 ataagagaagaaattatcaagtttgggcaaatgttctaaaatcagagaatgcaa-agaaggaaactcgaatttttcattagttatgtcattatctccact 178  Q
    |||||||||||||  ||||||| |   ||||||||||||| ||| |||| |||| ||||| |||||| | ||||||||||||||| ||||||| | |||     
T  22285084 ataagagaagaaagaatcaagtgtctccaaatgttctaaagtcaaagaacgcaatagaag-aaactcaattttttcattagttatatcattatttgcaca 22285182  T
Q  179 tgaatcacgatcttctagtattatctccgtcatagaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagaga 278  Q
    |||||     ||||| || | ||||||| |||||||| ||||||||||||||| |||||||  ||| |||||||||||  | | ||||| | |||||| |    
T  22285183 tgaattgttgtcttcgagcactatctccttcatagaattgcattgacaaacttcaatctcacgaaggtgagaaagtccttttagcattgcaaaggagaaa 22285282  T
Q  279 agatattttaattggacacaattgttgactttgataaca 317  Q
    ||||||||||| ||||| || || || ||||||| ||||    
T  22285283 agatattttaactggacgcagttttttactttgacaaca 22285321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 139 - 402
Target Start/End: Original strand, 42147 - 42410
Alignment:
Q  139 gaaactcgaatttttcattagttatgtcattatctccacttgaatcacgatcttctagtattatctccgtcatagaagtgcattgacaaactttaatctc 238  Q
    ||||||| | |||||||| |||||| ||||||| | |||||||||     ||||| |  | ||| ||| |||||||| |||| |||||||||| |||||     
T  42147 gaaactcaattttttcatcagttatatcattatttgcacttgaattgttgtcttcaaacactatttccctcatagaattgcactgacaaacttcaatctt 42246  T
Q  239 agaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaattgttgactttgataacacttagcttgccaaaggaatta 338  Q
    |||||  || |||||| |  |||||| || ||||||||  ||||||||||||||||  ||||| ||||||||||||||||| || || ||||| ||| ||    
T  42247 agaaatttgggaaagttctttaaccactgcataggagaatagatattttaattggatgcaatttttgactttgataacactgagatttccaaaagaagta 42346  T
Q  339 gcttcaagtcggccatgacatattcgcttcaaatttttaagattcttaagtacaagtttttcca 402  Q
    | |  | || | |||||||||||  ||| ||| ||||||||| | | |||||| ||| ||||||    
T  42347 gttgaaggttgaccatgacatatatgctccaagtttttaagactgtgaagtactagtgtttcca 42410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 319
Target Start/End: Complemental strand, 114818 - 114699
Alignment:
Q  200 tatctccgtcatagaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaa 299  Q
    ||||||| |||||||| |||| | |||||||| ||||| | |||| |||||||||||  ||||||||| | |||||| |||||| ||||| ||||| |||    
T  114818 tatctccttcatagaattgcactcacaaacttcaatcttacaaaggtgagaaagtcctttaaccattgtaaaggagaaaagatactttaactggacgcaa 114719  T
Q  300 ttgttgactttgataacact 319  Q
    || || ||||||||||||||    
T  114718 ttttttactttgataacact 114699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 319
Target Start/End: Complemental strand, 138264 - 138145
Alignment:
Q  200 tatctccgtcatagaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaa 299  Q
    ||||||| |||||||| |||| | |||||||| ||||| | |||| |||||||||||  ||||||||| | |||||| |||||| ||||| ||||| |||    
T  138264 tatctccttcatagaattgcactcacaaacttcaatcttacaaaggtgagaaagtcctttaaccattgtaaaggagaaaagatactttaactggacgcaa 138165  T
Q  300 ttgttgactttgataacact 319  Q
    || || ||||||||||||||    
T  138164 ttttttactttgataacact 138145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 319
Target Start/End: Complemental strand, 167216 - 167105
Alignment:
Q  208 tcatagaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaattgttgac 307  Q
    |||||||| |||| | |||||||||||||| |||||  ||  ||||| |  |||||| || ||| ||||  | ||||||||||||||| || || |||||    
T  167216 tcatagaattgcactcacaaactttaatcttagaaatgtggtaaagttctttaaccactggatatgagaatatatattttaattggacgcagtttttgac 167117  T
Q  308 tttgataacact 319  Q
    ||||||||||||    
T  167116 tttgataacact 167105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 319
Target Start/End: Original strand, 20815822 - 20815941
Alignment:
Q  200 tatctccgtcatagaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaa 299  Q
    ||||||| |||||||| |||| | |||||||| ||||| | |||| |||||||||||  ||||||||| | |||||| |||||| ||||| ||||| |||    
T  20815822 tatctccttcatagaattgcactcacaaacttcaatcttacaaaggtgagaaagtcctttaaccattgtaaaggagaaaagatactttaactggacgcaa 20815921  T
Q  300 ttgttgactttgataacact 319  Q
    || || ||||||||||||||    
T  20815922 ttttttactttgataacact 20815941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 200 - 319
Target Start/End: Original strand, 9259 - 9378
Alignment:
Q  200 tatctccgtcatagaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaa 299  Q
    ||||||| ||| |||| |||| | |||||||| ||||| | |||| |||||||||||  ||||||||| | |||||| |||||| ||||| ||||| |||    
T  9259 tatctccttcaaagaattgcactcacaaacttcaatcttacaaaggtgagaaagtcctttaaccattgtaaaggagaaaagatactttaactggacgcaa 9358  T
Q  300 ttgttgactttgataacact 319  Q
    || || ||||||||||||||    
T  9359 ttttttactttgataacact 9378  T

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Target: scaffold0069 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 200 - 319
Target Start/End: Complemental strand, 25506 - 25387
Alignment:
Q  200 tatctccgtcatagaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaa 299  Q
    ||||||| || ||||| |||| | |||||||| ||||| | |||| ||||||||||   ||||||||| | |||| | |||||| ||||| ||||| |||    
T  25506 tatctccttcgtagaattgcactcacaaacttcaatcttacaaaggtgagaaagtcgtttaaccattgtaaaggacaaaagatactttaagtggacgcaa 25407  T
Q  300 ttgttgactttgataacact 319  Q
    || || ||||||||||||||    
T  25406 tttttcactttgataacact 25387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 200 - 319
Target Start/End: Original strand, 38058796 - 38058915
Alignment:
Q  200 tatctccgtcatagaagtgcattgacaaactttaatctcagaaagatgagaaagtcccataaccattgaataggagagaagatattttaattggacacaa 299  Q
    ||||||| |||||||| |||| |   |||||| ||||| |||||  || |||||| |  | ||||||  ||||||||  ||||||||||||||||| |||    
T  38058796 tatctccttcatagaattgcactcggaaacttcaatcttagaaatgtgggaaagttctttgaccatttcataggagaatagatattttaattggacgcaa 38058895  T
Q  300 ttgttgactttgataacact 319  Q
    || |||||||||||||||||    
T  38058896 tttttgactttgataacact 38058915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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