View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2255_low_3 (Length: 308)

Name: NF2255_low_3
Description: NF2255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2255_low_3
NF2255_low_3
[»] chr5 (61 HSPs)
chr5 (42-301)||(19579682-19579954)
chr5 (171-308)||(21191001-21191141)
chr5 (42-133)||(19586416-19586507)
chr5 (171-302)||(21576690-21576824)
chr5 (179-291)||(28588627-28588742)
chr5 (220-308)||(6247596-6247687)
chr5 (221-293)||(33178014-33178089)
chr5 (171-302)||(43001780-43001919)
chr5 (171-302)||(43564863-43564995)
chr5 (171-302)||(6770523-6770650)
chr5 (169-271)||(21194066-21194171)
chr5 (244-302)||(14674249-14674307)
chr5 (179-237)||(15382533-15382591)
chr5 (171-237)||(39698600-39698666)
chr5 (171-308)||(4105231-4105373)
chr5 (226-306)||(19552545-19552626)
chr5 (253-306)||(22423842-22423895)
chr5 (171-275)||(30502333-30502440)
chr5 (171-275)||(30542676-30542783)
chr5 (244-308)||(13287420-13287484)
chr5 (244-308)||(22013388-22013452)
chr5 (171-293)||(17123037-17123161)
chr5 (241-283)||(26609352-26609394)
chr5 (221-308)||(19820391-19820479)
chr5 (259-308)||(30135287-30135336)
chr5 (174-293)||(31084312-31084439)
chr5 (215-302)||(16203784-16203874)
chr5 (244-308)||(21522724-21522788)
chr5 (244-308)||(21533290-21533354)
chr5 (229-304)||(41995449-41995525)
chr5 (253-308)||(3751960-3752014)
chr5 (182-237)||(7677764-7677819)
chr5 (171-230)||(14873577-14873636)
chr5 (244-307)||(15410469-15410532)
chr5 (171-234)||(26312820-26312883)
chr5 (257-300)||(38816729-38816772)
chr5 (253-304)||(41558713-41558764)
chr5 (266-308)||(6072357-6072399)
chr5 (248-302)||(7175044-7175098)
chr5 (226-283)||(7677704-7677764)
chr5 (253-303)||(9449448-9449498)
chr5 (171-225)||(16864087-16864141)
chr5 (202-275)||(23012384-23012460)
chr5 (244-302)||(27144443-27144501)
chr5 (171-237)||(30098983-30099049)
chr5 (244-290)||(35017029-35017075)
chr5 (227-308)||(36642763-36642847)
chr5 (253-283)||(38464394-38464424)
chr5 (171-237)||(39268543-39268609)
chr5 (244-306)||(42469197-42469259)
chr5 (193-238)||(11084346-11084391)
chr5 (179-283)||(42893359-42893466)
chr5 (244-308)||(6326318-6326382)
chr5 (264-308)||(15382451-15382495)
chr5 (173-237)||(21522809-21522873)
chr5 (173-237)||(21533375-21533439)
chr5 (173-237)||(21542089-21542153)
chr5 (244-292)||(23220973-23221021)
chr5 (217-308)||(24906292-24906386)
chr5 (171-215)||(35252263-35252307)
chr5 (244-304)||(40000556-40000616)
[»] chr6 (51 HSPs)
chr6 (171-308)||(34595108-34595248)
chr6 (217-308)||(853850-853944)
chr6 (171-302)||(17841534-17841668)
chr6 (171-302)||(28152079-28152212)
chr6 (171-308)||(7977775-7977915)
chr6 (171-306)||(4877918-4878056)
chr6 (171-307)||(9658854-9658994)
chr6 (216-308)||(8776963-8777058)
chr6 (171-295)||(32978844-32978972)
chr6 (171-298)||(7265538-7265668)
chr6 (249-308)||(5000652-5000711)
chr6 (171-308)||(6898226-6898366)
chr6 (179-308)||(16833282-16833414)
chr6 (220-308)||(426508-426599)
chr6 (179-306)||(3398595-3398729)
chr6 (171-275)||(28715302-28715409)
chr6 (171-275)||(32511611-32511718)
chr6 (221-308)||(7938090-7938180)
chr6 (226-308)||(10770674-10770759)
chr6 (179-308)||(12696298-12696435)
chr6 (226-308)||(16766671-16766756)
chr6 (171-308)||(17327595-17327740)
chr6 (253-307)||(8365549-8365603)
chr6 (171-237)||(10339059-10339125)
chr6 (214-295)||(19040339-19040423)
chr6 (179-308)||(33001242-33001374)
chr6 (220-308)||(5732504-5732595)
chr6 (214-274)||(31579215-31579276)
chr6 (228-307)||(8805576-8805656)
chr6 (258-306)||(13851712-13851760)
chr6 (244-307)||(7086770-7086833)
chr6 (253-308)||(9027152-9027207)
chr6 (226-308)||(9107370-9107455)
chr6 (253-308)||(9629357-9629412)
chr6 (226-299)||(7930288-7930364)
chr6 (179-237)||(8714039-8714097)
chr6 (171-308)||(13360318-13360457)
chr6 (171-237)||(18367895-18367961)
chr6 (171-236)||(5000560-5000625)
chr6 (180-237)||(5970051-5970108)
chr6 (258-307)||(15489767-15489816)
chr6 (258-306)||(13855587-13855635)
chr6 (244-304)||(19044442-19044502)
chr6 (244-304)||(25038092-25038152)
chr6 (188-274)||(403827-403915)
chr6 (244-290)||(25096415-25096461)
chr6 (225-289)||(7801155-7801222)
chr6 (253-302)||(20371140-20371189)
chr6 (244-308)||(6389717-6389781)
chr6 (171-231)||(31384984-31385044)
chr6 (226-293)||(34290079-34290147)
[»] chr4 (35 HSPs)
chr4 (171-308)||(35157930-35158070)
chr4 (171-308)||(23292931-23293071)
chr4 (171-304)||(12895219-12895355)
chr4 (169-308)||(49430999-49431142)
chr4 (171-304)||(12797283-12797418)
chr4 (179-308)||(21945477-21945609)
chr4 (179-275)||(28964201-28964300)
chr4 (179-282)||(4157150-4157255)
chr4 (171-293)||(34306749-34306873)
chr4 (171-283)||(2361920-2362035)
chr4 (179-262)||(4157456-4157542)
chr4 (173-275)||(8423665-8423770)
chr4 (244-307)||(27706198-27706261)
chr4 (216-282)||(54580013-54580082)
chr4 (241-307)||(11651152-11651218)
chr4 (253-290)||(24613731-24613768)
chr4 (244-308)||(36635298-36635362)
chr4 (181-236)||(21345488-21345543)
chr4 (179-292)||(16073385-16073500)
chr4 (253-307)||(19482643-19482697)
chr4 (185-302)||(40179595-40179715)
chr4 (245-289)||(5832716-5832760)
chr4 (196-275)||(29205451-29205533)
chr4 (244-308)||(40481611-40481674)
chr4 (244-299)||(4383351-4383405)
chr4 (171-230)||(27706111-27706170)
chr4 (171-226)||(29205527-29205582)
chr4 (171-237)||(53381535-53381602)
chr4 (171-237)||(15724488-15724554)
chr4 (171-237)||(30982812-30982878)
chr4 (171-224)||(715550-715603)
chr4 (171-224)||(752876-752929)
chr4 (171-231)||(3947706-3947766)
chr4 (259-307)||(20633460-20633508)
chr4 (181-237)||(34589658-34589714)
[»] chr3 (49 HSPs)
chr3 (171-304)||(55401053-55401189)
chr3 (171-293)||(20503454-20503579)
chr3 (181-302)||(10954932-10955056)
chr3 (179-308)||(28917975-28918109)
chr3 (183-308)||(26492162-26492290)
chr3 (216-308)||(10335276-10335371)
chr3 (179-237)||(40993288-40993346)
chr3 (220-308)||(8383231-8383322)
chr3 (179-275)||(11251985-11252082)
chr3 (178-308)||(7171476-7171608)
chr3 (222-308)||(8587017-8587106)
chr3 (171-272)||(8789493-8789599)
chr3 (266-307)||(14216867-14216908)
chr3 (266-307)||(14222996-14223037)
chr3 (173-306)||(15999957-16000099)
chr3 (244-308)||(2620074-2620138)
chr3 (244-308)||(3164046-3164110)
chr3 (171-290)||(35222930-35223052)
chr3 (216-302)||(10318025-10318113)
chr3 (244-303)||(11493382-11493441)
chr3 (171-308)||(24204986-24205126)
chr3 (179-237)||(4987233-4987291)
chr3 (242-296)||(13620783-13620837)
chr3 (171-237)||(15796228-15796294)
chr3 (171-299)||(27505229-27505365)
chr3 (253-308)||(750648-750704)
chr3 (244-304)||(10268507-10268567)
chr3 (244-308)||(14840312-14840376)
chr3 (185-237)||(24633360-24633412)
chr3 (244-308)||(26508084-26508148)
chr3 (171-227)||(49651721-49651777)
chr3 (253-308)||(9800014-9800069)
chr3 (253-308)||(41961680-41961735)
chr3 (173-231)||(3631738-3631796)
chr3 (244-290)||(34910309-34910355)
chr3 (171-237)||(41961584-41961650)
chr3 (226-282)||(1509539-1509598)
chr3 (253-302)||(3865586-3865635)
chr3 (244-293)||(4987312-4987361)
chr3 (172-237)||(25064966-25065031)
chr3 (171-208)||(34185057-34185094)
chr3 (171-208)||(40052389-40052426)
chr3 (244-300)||(12703989-12704045)
chr3 (244-308)||(14979155-14979219)
chr3 (256-308)||(15796327-15796379)
chr3 (244-308)||(25064883-25064947)
chr3 (253-293)||(26290360-26290400)
chr3 (253-293)||(40052321-40052361)
chr3 (220-275)||(49505148-49505206)
[»] chr1 (61 HSPs)
chr1 (171-300)||(22515832-22515964)
chr1 (171-302)||(38078606-38078740)
chr1 (171-302)||(46348328-46348462)
chr1 (171-298)||(37598816-37598945)
chr1 (179-304)||(1486657-1486790)
chr1 (216-293)||(22881606-22881686)
chr1 (180-299)||(1815240-1815362)
chr1 (171-306)||(42359394-42359532)
chr1 (171-237)||(47989556-47989622)
chr1 (179-283)||(40258886-40258993)
chr1 (169-308)||(5898209-5898351)
chr1 (171-237)||(31694644-31694710)
chr1 (254-308)||(40917725-40917779)
chr1 (171-283)||(51410023-51410139)
chr1 (180-275)||(40181878-40181976)
chr1 (244-307)||(34298411-34298474)
chr1 (171-308)||(5927285-5927425)
chr1 (221-307)||(9103615-9103703)
chr1 (171-308)||(16297226-16297368)
chr1 (244-308)||(398786-398850)
chr1 (244-308)||(2896142-2896206)
chr1 (244-300)||(12443481-12443537)
chr1 (220-307)||(41877464-41877554)
chr1 (244-308)||(48450608-48450672)
chr1 (253-308)||(1262858-1262913)
chr1 (253-308)||(10572619-10572674)
chr1 (171-273)||(18337338-18337443)
chr1 (171-237)||(32461398-32461464)
chr1 (171-237)||(40917808-40917874)
chr1 (178-282)||(18190060-18190167)
chr1 (182-305)||(31015020-31015140)
chr1 (171-208)||(46940753-46940790)
chr1 (218-281)||(14332634-14332700)
chr1 (244-308)||(14359543-14359606)
chr1 (244-308)||(15323137-15323201)
chr1 (244-308)||(15641051-15641115)
chr1 (181-237)||(19637816-19637872)
chr1 (244-308)||(20157371-20157435)
chr1 (214-293)||(36878450-36878532)
chr1 (226-308)||(5376500-5376585)
chr1 (253-308)||(6427324-6427379)
chr1 (247-302)||(18556480-18556535)
chr1 (162-237)||(29163317-29163392)
chr1 (244-275)||(29229468-29229499)
chr1 (171-237)||(5944342-5944408)
chr1 (253-307)||(9709795-9709849)
chr1 (171-237)||(9828103-9828169)
chr1 (171-237)||(25934675-25934741)
chr1 (244-293)||(17831552-17831601)
chr1 (214-274)||(21530697-21530760)
chr1 (226-282)||(24577186-24577245)
chr1 (171-208)||(29144325-29144362)
chr1 (171-232)||(33202956-33203017)
chr1 (216-308)||(39130757-39130852)
chr1 (244-292)||(113289-113337)
chr1 (253-293)||(609488-609528)
chr1 (244-304)||(2851000-2851059)
chr1 (244-308)||(7918232-7918296)
chr1 (247-291)||(32461487-32461531)
chr1 (244-308)||(34257931-34257995)
chr1 (264-308)||(48040503-48040547)
[»] scaffold0053 (1 HSPs)
scaffold0053 (171-308)||(8772-8912)
[»] chr2 (38 HSPs)
chr2 (171-308)||(18840958-18841098)
chr2 (171-282)||(2438664-2438778)
chr2 (171-302)||(37558957-37559091)
chr2 (226-308)||(20539674-20539759)
chr2 (171-304)||(15972851-15972987)
chr2 (171-293)||(38117104-38117229)
chr2 (220-308)||(19536391-19536483)
chr2 (188-276)||(5367198-5367289)
chr2 (179-307)||(20242680-20242811)
chr2 (189-308)||(30404813-30404935)
chr2 (256-307)||(12940968-12941019)
chr2 (179-307)||(14996172-14996308)
chr2 (220-304)||(31018568-31018655)
chr2 (244-307)||(21616737-21616800)
chr2 (244-307)||(30335392-30335455)
chr2 (244-307)||(34785003-34785066)
chr2 (226-304)||(36756344-36756425)
chr2 (171-237)||(24009343-24009409)
chr2 (171-241)||(28596513-28596583)
chr2 (171-237)||(35056927-35056993)
chr2 (171-237)||(37419802-37419868)
chr2 (171-232)||(11223798-11223858)
chr2 (179-236)||(19942314-19942371)
chr2 (171-236)||(26769571-26769636)
chr2 (179-236)||(27084318-27084375)
chr2 (227-307)||(36409630-36409711)
chr2 (226-301)||(12668423-12668501)
chr2 (244-308)||(15657838-15657902)
chr2 (244-308)||(21782839-21782903)
chr2 (254-302)||(31727837-31727885)
chr2 (258-291)||(33498619-33498652)
chr2 (253-293)||(11670744-11670784)
chr2 (179-239)||(12224269-12224329)
chr2 (249-293)||(12464875-12464919)
chr2 (228-295)||(18420436-18420506)
chr2 (244-308)||(23718000-23718064)
chr2 (244-308)||(24105672-24105736)
chr2 (244-276)||(25846747-25846779)
[»] chr7 (46 HSPs)
chr7 (174-307)||(33994187-33994323)
chr7 (179-307)||(26733279-26733410)
chr7 (188-293)||(41020485-41020593)
chr7 (171-307)||(598183-598322)
chr7 (171-275)||(21880159-21880266)
chr7 (171-304)||(5409776-5409917)
chr7 (179-307)||(18212986-18213118)
chr7 (179-308)||(24105652-24105784)
chr7 (171-302)||(15680789-15680923)
chr7 (244-307)||(2034416-2034479)
chr7 (171-308)||(13770665-13770810)
chr7 (226-308)||(27945015-27945100)
chr7 (171-285)||(32287408-32287525)
chr7 (171-308)||(43027409-43027554)
chr7 (171-237)||(24339701-24339767)
chr7 (220-304)||(11061070-11061157)
chr7 (179-308)||(21864780-21864914)
chr7 (188-283)||(8234145-8234243)
chr7 (252-308)||(28401117-28401173)
chr7 (253-308)||(11722128-11722183)
chr7 (171-293)||(20549780-20549905)
chr7 (219-308)||(25481876-25481968)
chr7 (179-236)||(3554459-3554516)
chr7 (244-308)||(2425754-2425818)
chr7 (244-308)||(5235960-5236024)
chr7 (226-293)||(9408334-9408404)
chr7 (244-308)||(15902796-15902860)
chr7 (244-308)||(22868016-22868080)
chr7 (244-308)||(24339616-24339680)
chr7 (220-306)||(3721070-3721158)
chr7 (256-299)||(8046060-8046103)
chr7 (248-306)||(1433430-1433488)
chr7 (246-304)||(10042915-10042973)
chr7 (244-290)||(11831424-11831470)
chr7 (253-307)||(19206025-19206079)
chr7 (256-306)||(21141015-21141065)
chr7 (174-231)||(2334314-2334371)
chr7 (171-231)||(32093959-32094020)
chr7 (244-293)||(32308109-32308158)
chr7 (221-281)||(37870894-37870957)
chr7 (253-293)||(927867-927907)
chr7 (171-231)||(9778559-9778619)
chr7 (253-297)||(11665470-11665514)
chr7 (244-308)||(17851405-17851469)
chr7 (253-289)||(35861957-35861993)
chr7 (188-236)||(39138493-39138541)
[»] chr8 (60 HSPs)
chr8 (179-302)||(36450707-36450833)
chr8 (226-308)||(2572056-2572141)
chr8 (171-308)||(926733-926873)
chr8 (219-308)||(20873043-20873135)
chr8 (171-299)||(5813575-5813706)
chr8 (174-273)||(40332200-40332302)
chr8 (171-307)||(949210-949348)
chr8 (172-274)||(33405330-33405435)
chr8 (226-299)||(15816129-15816205)
chr8 (171-275)||(3025558-3025665)
chr8 (253-308)||(22651950-22652005)
chr8 (174-237)||(24205756-24205819)
chr8 (253-307)||(3677761-3677815)
chr8 (254-308)||(29510335-29510389)
chr8 (241-307)||(41838141-41838207)
chr8 (253-290)||(29447140-29447177)
chr8 (179-230)||(4673367-4673418)
chr8 (179-293)||(20679348-20679465)
chr8 (253-308)||(27213521-27213576)
chr8 (171-238)||(29510238-29510305)
chr8 (179-293)||(31556986-31557102)
chr8 (171-275)||(37283760-37283862)
chr8 (171-237)||(3951481-3951547)
chr8 (227-308)||(4298887-4298971)
chr8 (171-237)||(22652035-22652101)
chr8 (171-237)||(28819250-28819316)
chr8 (171-237)||(34450966-34451032)
chr8 (174-290)||(14134691-14134810)
chr8 (171-232)||(15816063-15816124)
chr8 (179-282)||(16641922-16642033)
chr8 (171-236)||(29447044-29447109)
chr8 (214-291)||(27101506-27101585)
chr8 (189-237)||(29655930-29655978)
chr8 (174-237)||(126295-126358)
chr8 (219-277)||(4948657-4948718)
chr8 (171-230)||(6065591-6065650)
chr8 (178-237)||(8293873-8293932)
chr8 (253-308)||(13436994-13437049)
chr8 (179-237)||(17751703-17751762)
chr8 (179-237)||(17760690-17760749)
chr8 (171-237)||(27067236-27067300)
chr8 (244-299)||(34897068-34897123)
chr8 (247-301)||(12936515-12936569)
chr8 (221-290)||(13844591-13844663)
chr8 (169-231)||(22197674-22197736)
chr8 (254-304)||(24196628-24196678)
chr8 (220-293)||(24613510-24613585)
chr8 (255-305)||(29776013-29776063)
chr8 (244-290)||(39954300-39954346)
chr8 (217-293)||(4786329-4786408)
chr8 (220-308)||(8343290-8343381)
chr8 (171-283)||(18407718-18407833)
chr8 (253-302)||(31236607-31236656)
chr8 (253-306)||(36934646-36934699)
chr8 (256-308)||(4673458-4673510)
chr8 (253-305)||(18170512-18170564)
chr8 (253-305)||(18634080-18634132)
chr8 (244-308)||(22197763-22197827)
chr8 (264-308)||(25192388-25192432)
chr8 (179-274)||(31580080-31580178)
[»] scaffold0652 (1 HSPs)
scaffold0652 (171-306)||(407-545)
[»] scaffold0306 (1 HSPs)
scaffold0306 (171-302)||(13380-13520)
[»] scaffold0152 (1 HSPs)
scaffold0152 (171-302)||(21807-21947)
[»] scaffold0361 (1 HSPs)
scaffold0361 (171-290)||(14522-14641)
[»] scaffold0050 (1 HSPs)
scaffold0050 (171-290)||(70270-70392)
[»] scaffold0018 (1 HSPs)
scaffold0018 (256-308)||(178852-178904)
[»] scaffold0003 (1 HSPs)
scaffold0003 (171-308)||(241568-241719)
[»] scaffold0722 (1 HSPs)
scaffold0722 (186-299)||(6992-7108)
[»] scaffold0122 (2 HSPs)
scaffold0122 (217-296)||(7996-8077)
scaffold0122 (253-308)||(8640-8695)
[»] scaffold0004 (1 HSPs)
scaffold0004 (171-232)||(92875-92936)
[»] scaffold0223 (1 HSPs)
scaffold0223 (244-308)||(20146-20210)
[»] scaffold0083 (1 HSPs)
scaffold0083 (171-308)||(45475-45616)
[»] scaffold0007 (1 HSPs)
scaffold0007 (253-308)||(225298-225353)
[»] scaffold0103 (1 HSPs)
scaffold0103 (244-302)||(51791-51849)
[»] scaffold0085 (1 HSPs)
scaffold0085 (253-291)||(26384-26422)
[»] scaffold0086 (1 HSPs)
scaffold0086 (172-237)||(2987-3052)
[»] scaffold0246 (1 HSPs)
scaffold0246 (244-308)||(19550-19613)
[»] scaffold0027 (1 HSPs)
scaffold0027 (244-308)||(46656-46720)
[»] scaffold0011 (1 HSPs)
scaffold0011 (227-282)||(17750-17808)
[»] scaffold0475 (1 HSPs)
scaffold0475 (258-308)||(3290-3340)
[»] scaffold0227 (1 HSPs)
scaffold0227 (244-290)||(7332-7378)
[»] scaffold0136 (1 HSPs)
scaffold0136 (179-237)||(3791-3849)
[»] scaffold0019 (1 HSPs)
scaffold0019 (179-237)||(71784-71842)
[»] scaffold0793 (1 HSPs)
scaffold0793 (171-224)||(4826-4879)
[»] scaffold0697 (1 HSPs)
scaffold0697 (214-274)||(1652-1715)
[»] scaffold0049 (1 HSPs)
scaffold0049 (221-304)||(63750-63837)
[»] scaffold0008 (1 HSPs)
scaffold0008 (244-304)||(263393-263453)


Alignment Details
Target: chr5 (Bit Score: 134; Significance: 9e-70; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 42 - 301
Target Start/End: Complemental strand, 19579954 - 19579682
Alignment:
Q  42 ctcagcagcagccgtaagaatcagaacccaaggcttttgatgaaataaaagattcacaactacagtcatggtttcaagaaatatttcctggtcgagattc 141  Q
    |||||| ||||||| ||||||||||||||||  |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  19579954 ctcagccgcagccgcaagaatcagaacccaattcttttgatgaaataaaagattctcaac-acagtcatggtttcaagaaatatttcctggtcgagattc 19579856  T
Q  142 ttcccaacgtccacaactcgaaaccagtaaagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccg-----------aca 230  Q
    ||||  |||||||||||||||  ||| | || ||||||||||||||||||||||||||| ||||||||||| || |||||||||||           |||    
T  19579855 ttccagacgtccacaactcgattccaatgaaacacgtacactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgaca 19579756  T
Q  231 ccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgt 301  Q
    |||||||||   |||||||||||| ||||||||||||||||||||||| ||||||| ||| ||||| |||||||    
T  19579755 ccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgt 19579682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 21191001 - 21191141
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| |||||||||||||||||||||| |||| ||  || | |||| |||||||||||||||||||   ||| |||| ||| |||||||||| ||||    
T  21191001 aagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaa 21191100  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||| ||||||| | ||||||| ||||||||||||||    
T  21191101 attattagctgtgtcggcatgtcagtgtccgtgtcgtgtcc 21191141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 133
Target Start/End: Original strand, 19586416 - 19586507
Alignment:
Q  42 ctcagcagcagccgtaagaatcagaacccaaggcttttgatgaaataaaagattcacaactacagtcatggtttcaagaaatatttcctggt 133  Q
    |||||| ||||||| ||||||||||||||||| | |||||||||||| ||||||| |||  |||||||||||||||||| ||||||||||||    
T  19586416 ctcagccgcagccgcaagaatcagaacccaagtcatttgatgaaatagaagattctcaagcacagtcatggtttcaagatatatttcctggt 19586507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 21576690 - 21576824
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| |||||||||||||||||||||| || |||| ||| | ||||||||||||||| ||||||||   ||| |||| ||| |||||||||| ||||    
T  21576690 aagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaa 21576789  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    |||||||| ||||| | ||| ||||| | ||||||    
T  21576790 attattagctgtgttggcgtatcagtgttcgtgtc 21576824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 291
Target Start/End: Original strand, 28588627 - 28588742
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaaattattag 275  Q
    |||||| |||||||| |||||| | ||||| ||||||||||||||||||||||||||||   | ||| |||| ||| ||||||||||||||||||||||     
T  28588627 acactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgattttctcaaattattac 28588726  T
Q  276 ttgtgtcgacgtgtca 291  Q
      |||||| |||||||    
T  28588727 cggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 220 - 308
Target Start/End: Complemental strand, 6247687 - 6247596
Alignment:
Q  220 cgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||||||||||||||   ||| |||| ||| |||||||||| |||||||||||| ||||||| ||||||||| | ||| ||||||||    
T  6247687 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtcc 6247596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 221 - 293
Target Start/End: Complemental strand, 33178089 - 33178014
Alignment:
Q  221 gtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 293  Q
    |||||||||||||||||||   ||| |||||||| |||||||||| | |||||||||||||||||| |||||||||    
T  33178089 gtgtccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 43001919 - 43001780
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccga-----caccgacactt---attgcactaaatcatgtgatttt 262  Q
    ||||||| |||||||||||||||||||||| | |||||| || | |||||||||||||     |||| ||||||   ||| |||| ||| |||| |||||    
T  43001919 aagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacacatcaccaacacttgtaattacactgaattatgtaatttt 43001820  T
Q  263 ctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
     ||||||||||||  |||||||| ||||||| ||||||||    
T  43001819 ttcaaattattagcagtgtcgacatgtcagtgtccgtgtc 43001780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 43564995 - 43564863
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||||| |||||||||||||||| |||| ||  || |  |||||||||||||||||||||||   ||| |||||||| ||||||||||  |||    
T  43564995 aagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgatttttccaa 43564896  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    |||||  | ||||||| ||||||||| | ||||||    
T  43564895 attat--gatgtgtcggcgtgtcagtgttcgtgtc 43564863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 6770650 - 6770523
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat-tgcactaaatcatgtgattttctcaaat 269  Q
    ||||||| |||||| ||||||||||||||| || |     || |||||||||||||||||| ||||| ||  | |||| ||| |||||||||||| ||||    
T  6770650 aagcacggacactcttcggattaggcgtgtaccag-----gacatgtgtcgtgtccgacactgacacataagtacactgaattatgtgattttcttaaat 6770556  T
Q  270 tattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    |||||||||||||   |||||||| ||||||||    
T  6770555 tattagttgtgtcagtgtgtcagtgtccgtgtc 6770523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 271
Target Start/End: Original strand, 21194066 - 21194171
Alignment:
Q  169 taaagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctc 265  Q
    ||||||||| |||||||||||||||||||||  |||||||  || ||||||||||||| ||||| | ||   | ||| |||| ||| |||||||||||||    
T  21194066 taaagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtccaacaccaatacctataattacactgaatgatgtgattttctc 21194165  T
Q  266 aaatta 271  Q
    ||||||    
T  21194166 aaatta 21194171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 302
Target Start/End: Complemental strand, 14674307 - 14674249
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    |||||||| |||||||||| |||||||||||| ||||||| ||||||||| ||||||||    
T  14674307 cactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 15382591 - 15382533
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    |||||||||||||||||||||| |||||||  || ||||||||||||| ||||||||||    
T  15382591 acactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacac 15382533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 39698666 - 39698600
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| ||||||||||||||||||||||  ||||||  ||||  |||||||||||||||||||||    
T  39698666 aagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacac 39698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 308
Target Start/End: Complemental strand, 4105373 - 4105231
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgat--tttctc 265  Q
    ||||||| |||||||||||||||||||||| || || | ||| |  | ||| ||| || ||| ||||||   ||| |||| ||| |||||||  ||| ||    
T  4105373 aagcacggacactcctcggattaggcgtgtcccagtatcagacacatatcgagtctgatacctacacttgtaattacactgaattatgtgatcttttttc 4105274  T
Q  266 aaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||||||| ||||| |||||||||||||||||| |||||    
T  4105273 aaattattagttatgtcggcgtgtcagtatccgtgtcatgtcc 4105231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 306
Target Start/End: Original strand, 19552545 - 19552626
Alignment:
Q  226 cgacaccgacacttat-tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 306  Q
    ||||| |||||||||| | |||| ||| |||||||||| |||||||||||  ||||||| ||||||||| ||||||||||||    
T  19552545 cgacatcgacacttatatacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgt 19552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 22423842 - 22423895
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 306  Q
    |||||||||||||||||||||||| |||||   |||||||||||||||||||||    
T  22423842 atgtgattttctcaaattattagtagtgtcagggtgtcagtatccgtgtcgtgt 22423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 30502333 - 30502440
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||| |||| ||||||||| ||| || ||||  || ||||||||||||||||||||||||   | ||| |||| ||| | |||||||||||||    
T  30502333 aagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaa 30502432  T
Q  268 attattag 275  Q
    ||||||||    
T  30502433 attattag 30502440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 30542676 - 30542783
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||| |||| ||||||||| ||| || ||||  || ||||||||||||||||||||||||   | ||| |||| ||| | |||||||||||||    
T  30542676 aagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaa 30542775  T
Q  268 attattag 275  Q
    ||||||||    
T  30542776 attattag 30542783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 13287420 - 13287484
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||||||||| |||||||||||  ||||||||||||| ||| ||||||||||||||    
T  13287420 cactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtcc 13287484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 22013452 - 22013388
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||| |||| |||||  ||||||||||| ||||||| ||||||||| ||||||||||||||    
T  22013452 cactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 22013388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 293
Target Start/End: Complemental strand, 17123161 - 17123037
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgaca---cttattgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||||||||||||||||||||| ||| ||||  || |||| |||||||| |||||||||    | |||| |||  || |||||||||||||||    
T  17123161 aagcacggacactcctcggattaggcgtg-tcccgtgtcggacatgtttcgtgtccaacaccgacatatataattgtacttgattatgtgattttctcaa 17123063  T
Q  268 attattagttgtgtcgacgtgtcagt 293  Q
    ||||||||  |||| | |||||||||    
T  17123062 attattagcggtgttggcgtgtcagt 17123037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 283
Target Start/End: Complemental strand, 26609394 - 26609352
Alignment:
Q  241 ttgcactaaatcatgtgattttctcaaattattagttgtgtcg 283  Q
    |||||||||||||||||||||| ||||||||||||| ||||||    
T  26609394 ttgcactaaatcatgtgattttatcaaattattagtggtgtcg 26609352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 308
Target Start/End: Original strand, 19820391 - 19820479
Alignment:
Q  221 gtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||||||||||||||||   || ||| ||| |||  ||||||||||||||||||  ||||||  |||||||| ||||||||||||||    
T  19820391 gtgtccgacaccgacacttataattgtacttaattatg--attttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtcc 19820479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 259 - 308
Target Start/End: Complemental strand, 30135336 - 30135287
Alignment:
Q  259 ttttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| |||||||||||||||||||| |||||| ||||| |||||||||||    
T  30135336 ttttttcaaattattagttgtgtcggcgtgtcggtatctgtgtcgtgtcc 30135287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 31084439 - 31084312
Alignment:
Q  174 cacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacac-----cgacactt---attgcactaaatcatgtgattttctc 265  Q
    |||| |||||||||||||||||| ||| || ||||  || | ||||||||||||||||     ||||||||   ||| || | ||| |||||||||| ||    
T  31084439 cacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatgtgattttttc 31084340  T
Q  266 aaattattagttgtgtcgacgtgtcagt 293  Q
    |||||||||| ||||||| |||||||||    
T  31084339 aaattattagctgtgtcggcgtgtcagt 31084312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 302
Target Start/End: Original strand, 16203784 - 16203874
Alignment:
Q  215 tgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    |||||| |||||||||||||||| |||   | |||||||| ||| |||||||||||||||||||  |||||| | ||| ||| ||||||||    
T  16203784 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtgtc 16203874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 21522788 - 21522724
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||| ||||| | |||||||||| ||||||| ||||||||| ||||||||||||||    
T  21522788 cactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 21522724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 21533354 - 21533290
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||| ||||| | |||||||||| ||||||| ||||||||| ||||||||||||||    
T  21533354 cactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 21533290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 41995525 - 41995449
Alignment:
Q  229 caccgacactta-ttgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 304  Q
    |||||||||||| || || | ||| |||||||||| || ||||||||||||||||| ||||||||| || |||||||    
T  41995525 caccgacacttaattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgt 41995449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 3751960 - 3752014
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||||||||||||||||| ||||||||| ||| ||| | ||||||||||||    
T  3751960 atgtgattttctcaaattattag-tgtgtcgacttgttagtgttcgtgtcgtgtcc 3752014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 7677819 - 7677764
Alignment:
Q  182 ctcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||||||||||||||| |||||||  || ||||| |||||| |||||||||||    
T  7677819 ctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacac 7677764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 14873636 - 14873577
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgaca 230  Q
    ||||||| |||||||||||||||||||||| |||||||| || | |||| | ||||||||    
T  14873636 aagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgtccgaca 14873577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 15410469 - 15410532
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    |||| |||||| | ||||||| ||||||||||  |||||| ||||||||| |||||||||||||    
T  15410469 cactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 15410532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 26312883 - 26312820
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccga 234  Q
    |||||| |||||||||||||||||| |||| | ||||| ||| | || ||||||||||||||||    
T  26312883 aagcacatacactcctcggattaggtgtgtcctggtgtcagacacgtatcgtgtccgacaccga 26312820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Original strand, 38816729 - 38816772
Alignment:
Q  257 gattttctcaaattattagttgtgtcgacgtgtcagtatccgtg 300  Q
    |||||||||||||||||||  |||||| ||||||||||||||||    
T  38816729 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 38816772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 304
Target Start/End: Original strand, 41558713 - 41558764
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 304  Q
    |||| ||||||||||||||||| ||||||| | |||||||| ||||||||||    
T  41558713 atgtcattttctcaaattattatttgtgtcaatgtgtcagtgtccgtgtcgt 41558764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 6072357 - 6072399
Alignment:
Q  266 aaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||    
T  6072357 aaattattagttatgtcggcgtgtcagtatccgtatcgtgtcc 6072399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 302
Target Start/End: Original strand, 7175044 - 7175098
Alignment:
Q  248 aaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    |||| ||||||||||||||||||||||   ||||||| |||||||| ||||||||    
T  7175044 aaattatgtgattttctcaaattattaacggtgtcgatgtgtcagtgtccgtgtc 7175098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 283
Target Start/End: Complemental strand, 7677764 - 7677704
Alignment:
Q  226 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcg 283  Q
    ||||||||||||||   |||||||| ||| |||||||||| |||||||||||| |||||||    
T  7677764 cgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtcg 7677704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 303
Target Start/End: Complemental strand, 9449498 - 9449448
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcg 303  Q
    |||||||||||||||||||||| | |||||| |||| |||| |||||||||    
T  9449498 atgtgattttctcaaattattattggtgtcggcgtgccagtgtccgtgtcg 9449448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 16864141 - 16864087
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtc 225  Q
    |||||| || ||| ||||||||||||||||||| |||| |||||||| |||||||    
T  16864141 aagcacatatacttctcggattaggcgtgttccagtgtcagatatgtatcgtgtc 16864087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 275
Target Start/End: Original strand, 23012384 - 23012460
Alignment:
Q  202 ccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaaattattag 275  Q
    ||||||| ||| ||||||||||||| ||||||||||   | ||| || ||||| || ||||||||||||||||||||    
T  23012384 ccggtgtcagacatgtgtcgtgtccaacaccgacacatataattacattaaattatatgattttctcaaattattag 23012460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 302
Target Start/End: Complemental strand, 27144501 - 27144443
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    |||||||| ||||||||| |||||||||||||  |||||| ||||||||| || |||||    
T  27144501 cactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtctgtgtc 27144443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 30098983 - 30099049
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| |||||||| |||| |||||||| || |||| ||| | ||||||| ||||||||||||||    
T  30098983 aagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacac 30099049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 35017075 - 35017029
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtc 290  Q
    |||||||| |||||||||||||||||||||||| || ||| ||||||    
T  35017075 cactaaattatgtgattttctcaaattattagtggtttcggcgtgtc 35017029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 36642763 - 36642847
Alignment:
Q  227 gacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||||||||||   | |||||||  |||| | ||| |||||||||||  ||||||| ||||||||| ||||||||||||||    
T  36642763 gacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtcc 36642847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 283
Target Start/End: Original strand, 38464394 - 38464424
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcg 283  Q
    |||||||||||||||||||||||||||||||    
T  38464394 atgtgattttctcaaattattagttgtgtcg 38464424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 39268543 - 39268609
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| |||||||||||||||||||||| || ||||  || |  |||||||||| ||||||||||    
T  39268543 aagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacac 39268609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 306
Target Start/End: Complemental strand, 42469259 - 42469197
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 306  Q
    |||||||  |||| |||||||||||||||||   |||||| ||||||| ||||||||||||||    
T  42469259 cactaaaatatgtcattttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgt 42469197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 11084391 - 11084346
Alignment:
Q  193 aggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacact 238  Q
    |||||||| |||||||| || ||||||||||||| |||||||||||    
T  11084391 aggcgtgtcccggtgttcgacatgtgtcgtgtccaacaccgacact 11084346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 283
Target Start/End: Complemental strand, 42893466 - 42893359
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 275  Q
    |||||||||  ||||||||||| | |||||  || | |||| ||||| |||||||||||||   ||| ||||  || |||||||||| ||||||||||||    
T  42893466 acactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgattttttcaaattattag 42893367  T
Q  276 ttgtgtcg 283  Q
     |||||||    
T  42893366 ctgtgtcg 42893359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 6326318 - 6326382
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||| |||||||||||||| |||   ||||| ||||||||| ||||||||||||||    
T  6326318 cactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtcc 6326382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 308
Target Start/End: Complemental strand, 15382495 - 15382451
Alignment:
Q  264 tcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||||||| ||||||| ||||||| | ||||||||||||||    
T  15382495 tcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtcc 15382451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 21522873 - 21522809
Alignment:
Q  173 gcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||| |||||| | ||||||||||||| ||||||   || | ||||||||||||||||||||||    
T  21522873 gcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 21533439 - 21533375
Alignment:
Q  173 gcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||| |||||| | ||||||||||||| ||||||   || | ||||||||||||||||||||||    
T  21533439 gcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 21542153 - 21542089
Alignment:
Q  173 gcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||| ||| |||| ||||| ||||||| |||||||  || | ||||||||||||||||||||||    
T  21542153 gcacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 23221021 - 23220973
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcag 292  Q
    |||||||| |||||||||| ||||||||||||  |||||||| ||||||    
T  23221021 cactaaattatgtgattttatcaaattattagcggtgtcgacatgtcag 23220973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 308
Target Start/End: Original strand, 24906292 - 24906386
Alignment:
Q  217 tgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||||||| ||||||||||   ||| |||| ||| |||| ||||| |||||||||||  ||||| | ||||||||| | ||||||||||||    
T  24906292 tgtcatgtccgataccgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtgtcgtgtcc 24906386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 35252263 - 35252307
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatat 215  Q
    |||||| || |||||||||||||||||||||| ||||| ||||||    
T  35252263 aagcacatatactcctcggattaggcgtgttcaggtgtcagatat 35252307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 40000556 - 40000616
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 304  Q
    |||| ||| |||||||||| |||||||||||   |||||||| ||||||| ||||||||||    
T  40000556 cactgaattatgtgattttttcaaattattaagagtgtcgacatgtcagtgtccgtgtcgt 40000616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 171 - 308
Target Start/End: Complemental strand, 34595248 - 34595108
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||||||||||||||||| |||| ||||||| ||| | ||||||||||||||||||||||||   ||| |||| ||| |||||||||| ||||    
T  34595248 aagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaa 34595149  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||||||||||| ||||||| | ||||||||||||||    
T  34595148 attattagttgtgtcggcgtgtcattgtccgtgtcgtgtcc 34595108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 217 - 308
Target Start/End: Original strand, 853850 - 853944
Alignment:
Q  217 tgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||| ||||||||||||||||   |||||||| ||| |||||||||| |||||||||||||||||||| |||||||| |||||||||||||||    
T  853850 tgtcgtatccgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtcc 853944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 17841534 - 17841668
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||||||||||||||||||||||  | ||||  || |  ||||||||||||||||| |||||   ||| |||||||| |||||||||| ||||    
T  17841534 aagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaa 17841633  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    |||||||| ||||||| ||||||||| ||||||||    
T  17841634 attattagctgtgtcggcgtgtcagtgtccgtgtc 17841668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 28152212 - 28152079
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| |||||||||||||||||| ||| |||||||  || | ||||||||||||||||||||||||   ||| |||| ||| |||||||||| ||||    
T  28152212 aagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt-tcaa 28152114  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    |||||||| | ||||| ||||||||| ||||||||    
T  28152113 attattagctttgtcggcgtgtcagtgtccgtgtc 28152079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 7977775 - 7977915
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||||||||  ||||||||||||| || |||  || || ||| |||||||||||||||||||   ||| |||| ||| |||| ||||| ||||    
T  7977775 aagcacgaacactccttagattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacacttgtaattacactgaattatgtaattttttcaa 7977874  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||| ||||||| ||||||||||||| ||||||||||    
T  7977875 attattagctgtgtcggcgtgtcagtatccatgtcgtgtcc 7977915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 306
Target Start/End: Complemental strand, 4878056 - 4877918
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtga-ttttctca 266  Q
    ||||||| |||||||||||||||||||||| || ||||  || ||||||||||||||||||||||||||   |||  ||| ||| |||||| |||| |||    
T  4878056 aagcacggacactcctcggattaggcgtgt-cctgtgtcggacatgtgtcgtgtccgacaccgacacttgtaattatacttaattatgtgacttttttca 4877958  T
Q  267 aattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 306  Q
    ||||||||| |||||||  |||||| ||||||||||||||    
T  4877957 aattattagctgtgtcggtgtgtcactatccgtgtcgtgt 4877918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 307
Target Start/End: Complemental strand, 9658994 - 9658854
Alignment:
Q  171 aagcacgtacactcctcgga-ttaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctca 266  Q
    ||||||| |||||||| ||| |||||||||||||||||| ||| | ||||||||||  |||||||||  |||   | |||| ||| |||||||||||| |    
T  9658994 aagcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgattttctta 9658895  T
Q  267 aattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    |||||||||  |||||| ||||||||| |||||||||||||    
T  9658894 aattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 308
Target Start/End: Original strand, 8776963 - 8777058
Alignment:
Q  216 gtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||||||||||| ||||||   ||| |||| |||  ||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||    
T  8776963 gtgtcgtgtccgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtcc 8777058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 32978844 - 32978972
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtg-attttctca 266  Q
    ||||||| |||||||| ||||||| ||||| |||||||  || ||||||||||||||||||||||||||   ||| |||| ||| |||||  |||| |||    
T  32978844 aagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgtgttttttttca 32978943  T
Q  267 aattattagttgtgtcgacgtgtcagtat 295  Q
    ||||||||| ||||||| |||||| ||||    
T  32978944 aattattagctgtgtcggcgtgtccgtat 32978972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 298
Target Start/End: Original strand, 7265538 - 7265668
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaa 267  Q
    ||||||| || ||||||||||||||| | |||||||||  || |||| | |||||||||||||||||   | ||| |||| ||| |||||||||||||||    
T  7265538 aagcacggacgctcctcggattaggcatattccggtgtcggacatgtattgtgtccgacaccgacacatataattacactgaattatgtgattttctcaa 7265637  T
Q  268 attattagttgtgtcgacgtgtcagtatccg 298  Q
    ||||||||  |||| | ||||||||| ||||    
T  7265638 attattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 249 - 308
Target Start/End: Original strand, 5000652 - 5000711
Alignment:
Q  249 aatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||||||||||| |||||    
T  5000652 aatcatgtgattttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtcc 5000711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 6898226 - 6898366
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| |||||| |||||||||||||||| ||||||| || | |  |||||||||||||||||||||   ||| |||| ||| |||| ||||  ||||    
T  6898226 aagcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacacttgtaattacacttaattatgtaatttgttcaa 6898325  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||  |||||  ||||||||| ||| | ||||||||    
T  6898326 attattagacgtgtcagcgtgtcagtgtccatatcgtgtcc 6898366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 308
Target Start/End: Complemental strand, 16833414 - 16833282
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 275  Q
    |||||||||||||| || |||| | |||||  ||   ||||||||||  ||||||||||||   ||| |||| ||  |||||||||| ||||||||||||    
T  16833414 acactcctcggattcggtgtgtcctggtgtcggacgcgtgtcgtgtctaacaccgacacttgtaattacactgaagtatgtgattttttcaaattattag 16833315  T
Q  276 ttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||| ||||||||| || |||||||||||    
T  16833314 ttgtgtcggcgtgtcagtgtctgtgtcgtgtcc 16833282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 220 - 308
Target Start/End: Original strand, 426508 - 426599
Alignment:
Q  220 cgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||||||||||||||   ||| || | ||| |||||||||| |||||||||||  ||||||| ||||||||| ||||||||||||||    
T  426508 cgtgtccgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtcc 426599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 306
Target Start/End: Complemental strand, 3398729 - 3398595
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtcc-----gacaccgacacttat---tgcactaaatcatgtgattttctcaaatt 270  Q
    ||||||||| |||||| |||||||||||||  || |||||||||||||     |||||||| ||||||   | |||| ||| || ||||||| |||||||    
T  3398729 acactcctctgattagacgtgttccggtgtcggacatgtgtcgtgtccaacacgacaccgatacttataattacactgaattatatgatttt-tcaaatt 3398631  T
Q  271 attagttgtgtcgacgtgtcagtatccgtgtcgtgt 306  Q
    ||||| ||||||| ||||||||| ||||||||||||    
T  3398630 attagctgtgtcggcgtgtcagtgtccgtgtcgtgt 3398595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 275
Target Start/End: Complemental strand, 28715409 - 28715302
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||||||||| |||| ||||||||||| |||||||   | | ||||||||||||||||||||||||   ||| |||| ||| |||| ||||| ||||    
T  28715409 aagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaa 28715310  T
Q  268 attattag 275  Q
    ||||||||    
T  28715309 attattag 28715302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 32511611 - 32511718
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||||||||| ||||||||||| |||| ||| ||| || |||||| ||||||||| ||||||   ||| |||| ||| |||||||||||| ||    
T  32511611 aagcacggacactcctccgattaggcgtgctccgatgtcagacatatgtcgtatccgacaccaacacttataattacactgaattatgtgattttcttaa 32511710  T
Q  268 attattag 275  Q
    ||||||||    
T  32511711 attattag 32511718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 308
Target Start/End: Complemental strand, 7938180 - 7938090
Alignment:
Q  221 gtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||| |||||||||||||||   | |||||||| || ||||||| |||||||||||| ||||||| ||||||||| ||| ||||||||||    
T  7938180 gtgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtcc 7938090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 308
Target Start/End: Original strand, 10770674 - 10770759
Alignment:
Q  226 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||||||||   ||| |||| ||| |||||||||| |||||||||||||||||| | ||||||||| ||| ||||||||||    
T  10770674 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtcc 10770759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 308
Target Start/End: Complemental strand, 12696435 - 12696298
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacacc-----gacactt---attgcactaaatcatgtgattttctcaaatt 270  Q
    |||||||| |||| ||| |||| ||||||| ||| | ||||||||||||||||      |||||||   ||| |||| ||| |||| ||||| |||||||    
T  12696435 acactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgtaattttttcaaatt 12696336  T
Q  271 attagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||| ||||||| ||||||||| ||||||||||||||    
T  12696335 attagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 12696298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 16766756 - 16766671
Alignment:
Q  226 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||||||||   ||| |||| ||| |||||||||| |||||||||||| ||||||| ||||||||| ||| ||||||||||    
T  16766756 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtcc 16766671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 17327595 - 17327740
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtc-----cgacaccgacactta---ttgcactaaatcatgtgatttt 262  Q
    ||||||| |||||||||||||||||||||| || |||| ||| | ||||||||||     |||||| ||||| ||   || |||||||| ||||||||||    
T  17327595 aagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacacgacactgacacatatagttacactaaattatgtgatttt 17327694  T
Q  263 ctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||| | |||||||||||| ||| ||| | ||  ||||||||||    
T  17327695 ctcaaaatcttagttgtgtcggcgtatcactgtctatgtcgtgtcc 17327740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 8365549 - 8365603
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    ||||||| || |||||||||||||||||||| ||||||||| |||||||||||||    
T  8365549 atgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtc 8365603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 10339059 - 10339125
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| ||||||||| |||||||||||| || ||||  || ||||||||||||||||||||||||    
T  10339059 aagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 10339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 19040423 - 19040339
Alignment:
Q  214 atgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtat 295  Q
    |||||||||||||||||| ||||| |||   | |||| ||| |||||||||||||||||||||||  |||||| |||||||||||    
T  19040423 atgtgtcgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtat 19040339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 308
Target Start/End: Original strand, 33001242 - 33001374
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaaattattag 275  Q
    |||||| | ||||||||||| || |||||| ||| | ||||||||||||||||||||||   | ||| || | ||| |||||||||| ||||||||||||    
T  33001242 acactctttggattaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattag 33001341  T
Q  276 ttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
      |||||| ||||||| |  |||||| ||||||    
T  33001342 cagtgtcggcgtgtcattgaccgtgttgtgtcc 33001374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 308
Target Start/End: Original strand, 5732504 - 5732595
Alignment:
Q  220 cgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||||||||||||| |||   | |||||||  ||||||||||||||||||||||   |||||| ||||||||| ||| ||||||||||    
T  5732504 cgtgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtcc 5732595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 31579215 - 31579276
Alignment:
Q  214 atgtgtcgtgtccgacaccgacac-ttattgcactaaatcatgtgattttctcaaattatta 274  Q
    |||||||||||||||||||||||| | ||| |||| ||| ||||||||||||||||||||||    
T  31579215 atgtgtcgtgtccgacaccgacacataattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 307
Target Start/End: Original strand, 8805576 - 8805656
Alignment:
Q  228 acaccgacactta-ttgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    |||||||||| || || |||||||| |||||||||||||||||||||||  ||| ||||||||| || || ||||||||||    
T  8805576 acaccgacacataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtc 8805656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 13851760 - 13851712
Alignment:
Q  258 attttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 306  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  13851760 attttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 7086833 - 7086770
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    |||||||| |||||||||||||||||||||||  ||| ||||||||| || || ||||||||||    
T  7086833 cactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtc 7086770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 9027207 - 9027152
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||| ||||||||||||||  |||||| ||||||||| ||||||||||||||    
T  9027207 atgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtcc 9027152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 308
Target Start/End: Original strand, 9107370 - 9107455
Alignment:
Q  226 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||||||||   ||| |||| |||  ||||||||| |||||||||||| ||||||| ||||| ||| ||||||||||||||    
T  9107370 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtcc 9107455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 9629412 - 9629357
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||||||||||||||| |  |||||| ||||||| ||||||||||||||||    
T  9629412 atgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtcc 9629357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 299
Target Start/End: Complemental strand, 7930364 - 7930288
Alignment:
Q  226 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgt 299  Q
    ||||||||||||||   ||| |||||||| |||||||||| ||||||||||| |||||||| | ||||||| |||||    
T  7930364 cgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtccgt 7930288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 8714097 - 8714039
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    |||||||||||||| ||||||| ||| |||  || ||||||||||||||||||||||||    
T  8714097 acactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacac 8714039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 13360318 - 13360457
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaa 267  Q
    ||||||| |||||| |||||||||||||||  | ||||  || || ||| ||||| |||||||| || |||   | |||| ||| |||||||||||||||    
T  13360318 aagcacggacactcttcggattaggcgtgtctcagtgtcggacat-tgttgtgtctgacaccgaaacatataattacactgaattatgtgattttctcaa 13360416  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| |||| ||||||||||||| || | ||| ||||||||    
T  13360417 attactagtggtgtcgacgtgtctgtgttcgtatcgtgtcc 13360457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 18367961 - 18367895
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| |||||||| |||| |||||||| || |||| ||| |||||||||||| |||||||||||    
T  18367961 aagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacac 18367895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 5000560 - 5000625
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgaca 236  Q
    ||||||| |||||| ||||||||| ||||| | |||||  ||||||||||||||| ||||||||||    
T  5000560 aagcacgaacactcttcggattagacgtgtcctggtgtcggatatgtgtcgtgtctgacaccgaca 5000625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 5970051 - 5970108
Alignment:
Q  180 cactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||||||||| ||||||| ||| |||  || ||||||||||||||||||||||||    
T  5970051 cactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacac 5970108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 15489767 - 15489816
Alignment:
Q  258 attttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    ||||| |||||||||||||||||||||||||| ||| ||||||| |||||    
T  15489767 attttttcaaattattagttgtgtcgacgtgttagtgtccgtgttgtgtc 15489816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 13855635 - 13855587
Alignment:
Q  258 attttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 306  Q
    ||||||||||||||||||| ||||||| |||||||| ||| ||||||||    
T  13855635 attttctcaaattattagtagtgtcgatgtgtcagtttccatgtcgtgt 13855587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 19044502 - 19044442
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 304  Q
    |||| ||| ||||||| |||||||||||||||| |||||| ||||||||| ||| ||||||    
T  19044502 cactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtccatgtcgt 19044442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 25038092 - 25038152
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 304  Q
    |||||||| |||| |||||||||||||||||   ||||| ||||||||||||| |||||||    
T  25038092 cactaaattatgtaattttctcaaattattaacggtgtcaacgtgtcagtatctgtgtcgt 25038152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 403827 - 403915
Alignment:
Q  188 ggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattatta 274  Q
    ||||||||| ||| ||||||| ||| | ||| ||||||||||||||||||||    || |||||||| |||||||||| |||||||||||    
T  403827 ggattaggcctgt-ccggtgtaagacaggtgacgtgtccgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 25096461 - 25096415
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtc 290  Q
    ||||| || |||||||||||||||||||||||| |||||| ||||||    
T  25096461 cactagattatgtgattttctcaaattattagtggtgtcgtcgtgtc 25096415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 7801155 - 7801222
Alignment:
Q  225 ccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgt 289  Q
    |||||||||||||||   ||| | || ||| |||||||||| |||||||||||||||||||| |||||    
T  7801155 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgt 7801222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 302
Target Start/End: Original strand, 20371140 - 20371189
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    |||||||||||||||||||||||  |||||| ||||||| | ||||||||    
T  20371140 atgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtc 20371189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 6389781 - 6389717
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||| || | |||||||||||||||||   |||||| ||||| ||| ||||||||||||||    
T  6389781 cactaaattatatcattttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtcc 6389717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 31385044 - 31384984
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacac 231  Q
    ||||||| |||||||| ||||||||||||| |||||||  || | ||||||||||| ||||    
T  31385044 aagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacac 31384984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 293
Target Start/End: Original strand, 34290079 - 34290147
Alignment:
Q  226 cgacaccgacactta-ttgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 293  Q
    |||||||||||| || || |||| ||| |||||||| || ||||||||||||||||||| | |||||||    
T  34290079 cgacaccgacacataattacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagt 34290147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 4e-32; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 35157930 - 35158070
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||||| ||||||||| ||||||||||||||| || |||||||||||| |||||||||||||   ||| |||||||| ||||||||||  |||    
T  35157930 aagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgatttttccaa 35158029  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||||| |||| ||||||||| ||||||| ||||||    
T  35158030 attattagttgcgtcggcgtgtcagtgtccgtgttgtgtcc 35158070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 23292931 - 23293071
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| |||||||||||||||||||||| |||||||  || | ||||||||||||||||||||||||   |||  ||| ||| |||||||||| ||||    
T  23292931 aagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaa 23293030  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||| ||||||| ||||||| | ||||||||||||||    
T  23293031 attattagctgtgtcggcgtgtcattgtccgtgtcgtgtcc 23293071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 304
Target Start/End: Original strand, 12895219 - 12895355
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| |||||||||||||||||||||| ||| |||  ||||  |||||||||||||||||||||||   ||| ||| |||| |||||||||| ||||    
T  12895219 aagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgattttttcaa 12895318  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtcgt 304  Q
    ||||||| |||||||| ||||||| | | ||||||||    
T  12895319 attattatttgtgtcggcgtgtcattgttcgtgtcgt 12895355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 308
Target Start/End: Complemental strand, 49431142 - 49430999
Alignment:
Q  169 taaagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtga-ttttct 264  Q
    ||||||| | ||||||||||||| |||||||| |||||||| || | ||||||||||||||||||||||||   ||| |||| ||| |||||| |||| |    
T  49431142 taaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgattttttt 49431043  T
Q  265 caaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||||| ||||||| ||||||| | |||| |||||||||    
T  49431042 caaattattagctgtgtcggcgtgtcactgtccgagtcgtgtcc 49430999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 304
Target Start/End: Original strand, 12797283 - 12797418
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||| |||||||||||| | ||| ||||||| ||| |||| |||||||||||||||||||||   ||| |||| ||| |||||||||| ||||    
T  12797283 aagcacgaacattcctcggattagacttgtcccggtgtcagacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt-tcaa 12797381  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtcgt 304  Q
    |||||||||| || || ||||||||| ||||||||||    
T  12797382 attattagttttgccggcgtgtcagtgtccgtgtcgt 12797418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 179 - 308
Target Start/End: Complemental strand, 21945609 - 21945477
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 275  Q
    ||||||||||||||||||||||| ||||||  || ||||||| ||||||||||||||||||   ||| |||| ||| |||| ||||| ||||||||||||    
T  21945609 acactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattag 21945510  T
Q  276 ttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
     ||||||| | ||||||| || ||||| |||||    
T  21945509 ctgtgtcggcatgtcagtgtctgtgtcatgtcc 21945477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 28964201 - 28964300
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 275  Q
    |||||||||||||||||||||| || ||||  ||||||||||||||||||||| |||||||   ||| |||| ||| |||||||||| ||||||||||||    
T  28964201 acactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattttttcaaattattag 28964300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 179 - 282
Target Start/End: Complemental strand, 4157255 - 4157150
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 275  Q
    |||||||||| |||||| || |  ||||||  || ||||||||||||||||||||||||||   |||||||||||| |||||||||| ||||||||||||    
T  4157255 acactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt-tcaaattattag 4157157  T
Q  276 ttgtgtc 282  Q
    |||||||    
T  4157156 ttgtgtc 4157150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 34306749 - 34306873
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||| ||||| ||||||||||||  ||||||  || | ||||||||||||||||||||||||   ||| ||||| || || ||||||| ||||    
T  34306749 aagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactacattatctgatttt-tcaa 34306847  T
Q  268 attattagttgtgtcgacgtgtcagt 293  Q
    |||||||||||||||| ||| |||||    
T  34306848 attattagttgtgtcggcgtatcagt 34306873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 283
Target Start/End: Original strand, 2361920 - 2362035
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| |||||| || ||||||| ||||  |||||| ||| | | ||||||||||||||||||||||   ||| |||||||| |||| ||||| ||||    
T  2361920 aagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacacttttaattacactaaattatgtaattttttcaa 2362019  T
Q  268 attattagttgtgtcg 283  Q
    |||||||| |||||||    
T  2362020 attattagctgtgtcg 2362035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 4157542 - 4157456
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgatttt 262  Q
    |||||||||| ||||||||| |  ||||||  || ||||||||||||||||||||||||||   |||||||||||| ||||||||||    
T  4157542 acactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt 4157456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 275
Target Start/End: Original strand, 8423665 - 8423770
Alignment:
Q  173 gcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaat 269  Q
    ||||| ||||| ||| |||||||||||| |||||||  || |  |||||||||||||||||||| ||||   | |||| ||| |||||||||||||||||    
T  8423665 gcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaat 8423764  T
Q  270 tattag 275  Q
    ||||||    
T  8423765 tattag 8423770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 27706198 - 27706261
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    |||||||| |||||||||| | ||||||||| |||||||||||||||||| ||| |||||||||    
T  27706198 cactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtc 27706261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 54580013 - 54580082
Alignment:
Q  216 gtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtc 282  Q
    ||||||||||||||||||||||||||   | |||| ||| |||||||||| |||||||||||||||||||    
T  54580013 gtgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtc 54580082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 11651152 - 11651218
Alignment:
Q  241 ttgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    ||||||| ||| |||||||||| | |||||||||| ||||||||||||||||| ||||| |||||||    
T  11651152 ttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtc 11651218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 290
Target Start/End: Original strand, 24613731 - 24613768
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtc 290  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24613731 atgtgattttctcaaattattagttgtgtcgacgtgtc 24613768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 36635362 - 36635298
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||||||||||||||||||||||| |||| | ||||||||| |||| |||||||||    
T  36635362 cactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtcc 36635298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 21345488 - 21345543
Alignment:
Q  181 actcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgaca 236  Q
    |||||||||||||||| ||| |||||||| ||||||| ||||||| ||||||||||    
T  21345488 actcctcggattaggcatgtaccggtgttggatatgtatcgtgtctgacaccgaca 21345543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 292
Target Start/End: Complemental strand, 16073500 - 16073385
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 275  Q
    ||||||||||||||||||||||    ||||  || |||| |||||||||||||||||||||   ||| |||| ||| ||| |||||| |||||||||||     
T  16073500 acactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgcgatttt-tcaaattattac 16073402  T
Q  276 ttgtgtcgacgtgtcag 292  Q
    |||||| | ||||||||    
T  16073401 ttgtgttggcgtgtcag 16073385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 19482697 - 19482643
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    ||||||| || |||||||||||||||||||| ||||||||| || ||||||||||    
T  19482697 atgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtc 19482643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 302
Target Start/End: Original strand, 40179595 - 40179715
Alignment:
Q  185 ctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaaattattagttgtgt 281  Q
    ||||||||||||||||   |||||   | |||||||||||||||||||||| |   | ||| |||| ||| |||||||||| ||||| ||||| | ||||    
T  40179595 ctcggattaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgattttttcaaactattaatggtgt 40179694  T
Q  282 cgacgtgtcagtatccgtgtc 302  Q
    | |||||||||| ||||||||    
T  40179695 caacgtgtcagtgtccgtgtc 40179715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 5832716 - 5832760
Alignment:
Q  245 actaaatcatgtgattttctcaaattattagttgtgtcgacgtgt 289  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||    
T  5832716 actaaatcatatgattttctcaaattattagcagtgtcgacgtgt 5832760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 275
Target Start/End: Complemental strand, 29205533 - 29205451
Alignment:
Q  196 cgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 275  Q
    ||||| |||||||  || ||||||||||||| ||||||||||||   ||| |||| ||| |||||||||| ||||||||||||    
T  29205533 cgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 29205451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 40481674 - 40481611
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||||||||| |||||||||||||||| ||| ||||||||| || |||||||||||    
T  40481674 cactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtcc 40481611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 4383405 - 4383351
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgt 299  Q
    |||| ||| |||||||||| |||||||||||||||| ||||||||||||| |||||    
T  4383405 cactgaattatgtgatttt-tcaaattattagttgtatcgacgtgtcagtgtccgt 4383351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 27706111 - 27706170
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgaca 230  Q
    ||||||||||| ||||| |||||||||||| ||||| |  |||| |||||||||||||||    
T  27706111 aagcacgtacattcctcagattaggcgtgtcccggtatcggatacgtgtcgtgtccgaca 27706170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 226
Target Start/End: Complemental strand, 29205582 - 29205527
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtcc 226  Q
    ||||||| |||||||||||||||||||||| || ||||  || |||||||||||||    
T  29205582 aagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtcc 29205527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 53381535 - 53381602
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtc-gtgtccgacaccgacac 237  Q
    ||||||| ||||||||||||||||| |||| |||||||  |||| | ||| |||||||||||||||||    
T  53381535 aagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacac 53381602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 15724488 - 15724554
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    |||||| || |||||||||||||||||||||  |||||  || | |||| |||||||||||||||||    
T  15724488 aagcacataaactcctcggattaggcgtgttttggtgtctgacacgtgttgtgtccgacaccgacac 15724554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 30982812 - 30982878
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| |||||| | ||||||||||||| |||||||  || | |||||||||| |||||||||||    
T  30982812 aagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 715550 - 715603
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgt 224  Q
    ||||||| |||||||||||||||||||||| || ||||  || |||||||||||    
T  715550 aagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 715603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 752876 - 752929
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgt 224  Q
    ||||||| |||||||||||||||||||||| || ||||  || |||||||||||    
T  752876 aagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 752929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 3947706 - 3947766
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacac 231  Q
    ||||||| ||||||||||||||||| |||| | |||||  || | ||||||||||||||||    
T  3947706 aagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacac 3947766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 20633508 - 20633460
Alignment:
Q  259 ttttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    |||| ||||||||||||  |||||||||||||||| ||||| |||||||    
T  20633508 ttttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtc 20633460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 34589658 - 34589714
Alignment:
Q  181 actcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    |||||||||||||||||||   |||||| ||||| || ||||||||||||| |||||    
T  34589658 actcctcggattaggcgtgcctcggtgtcagatacgtatcgtgtccgacactgacac 34589714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 4e-32; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 171 - 304
Target Start/End: Complemental strand, 55401189 - 55401053
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||||||||||||||||||||||  ||||||  || | ||||||||||||||||||||||||   ||| |||||||| |||||||||| ||||    
T  55401189 aagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaa 55401090  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtcgt 304  Q
    |||||||||||||||| ||| ||||| ||||||||||    
T  55401089 attattagttgtgtcggcgtatcagtgtccgtgtcgt 55401053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 171 - 293
Target Start/End: Complemental strand, 20503579 - 20503454
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| |||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||||||||||   ||| |||| ||| |||| ||||| ||||    
T  20503579 aagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcattttttcaa 20503480  T
Q  268 attattagttgtgtcgacgtgtcagt 293  Q
    |||||| ||||||||| |||||||||    
T  20503479 attatttgttgtgtcggcgtgtcagt 20503454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 10955056 - 10954932
Alignment:
Q  181 actcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagtt 277  Q
    |||||||||||||||||||| || ||||  || | ||||||||||||||||||||||||   ||| |||| ||| |||||||||| ||||||||||||||    
T  10955056 actcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagtt 10954957  T
Q  278 gtgtcgacgtgtcagtatccgtgtc 302  Q
    |||||| ||||||||| | ||||||    
T  10954956 gtgtcggcgtgtcagtgttcgtgtc 10954932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 308
Target Start/End: Complemental strand, 28918109 - 28917975
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtcc--gacaccgacactt---attgcactaaatcatgtgattttctcaaattatt 273  Q
    |||||||| ||||||||||||| || ||||  || | |||||||||||  |||||||||||||   ||| |||| ||| |||||||||| ||||||||||    
T  28918109 acactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 28918010  T
Q  274 agttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    || | ||||| ||||||||| ||||||||||||||    
T  28918009 agctatgtcggcgtgtcagtttccgtgtcgtgtcc 28917975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 183 - 308
Target Start/End: Original strand, 26492162 - 26492290
Alignment:
Q  183 tcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgt 279  Q
    |||||||||||| |||||   ||||| ||| ||||||||||||||||||||| ||||   ||| |||| |||  | ||||||| |||||||||||| | |    
T  26492162 tcctcggattagacgtgtcttggtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctct 26492261  T
Q  280 gtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||||||||| ||||||||||||||    
T  26492262 gtcggcgtgtcagtgtccgtgtcgtgtcc 26492290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 308
Target Start/End: Original strand, 10335276 - 10335371
Alignment:
Q  216 gtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||| ||||||||||||||| |   | |||||||  |||||| ||| |||||||||||||||||||| ||||||||| ||||||||||||||    
T  10335276 gtgtcgtgcccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtcc 10335371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 40993288 - 40993346
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    |||||||||||||||||||||| |||||||  || ||||||||||||||||||||||||    
T  40993288 acactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 40993346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 220 - 308
Target Start/End: Complemental strand, 8383322 - 8383231
Alignment:
Q  220 cgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||||||||||||||||   | |||| ||| || ||||||||||||||||||||  |||||| ||||||| | ||||||||||||||    
T  8383322 cgtgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtcc 8383231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 11252082 - 11251985
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac-ttattgcactaaatcatgtgattttctcaaattattag 275  Q
    |||||||||||||||||||||||||| ||   || | |||| ||||| ||||||||||| | ||| |||| ||| |||||||||||||||||||||||    
T  11252082 acactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacacataattacactgaattatgtgattttctcaaattattag 11251985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 308
Target Start/End: Complemental strand, 7171608 - 7171476
Alignment:
Q  178 tacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattatta 274  Q
    ||||||||| |||||||||||||  ||||||  || | ||||||||||||||||| ||||||   ||| |||  ||| || ||||||| ||||||||  |    
T  7171608 tacactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattatatgatttt-tcaaattacaa 7171510  T
Q  275 gttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    | ||||||| | ||||||||||||||||||||||    
T  7171509 gctgtgtcggcatgtcagtatccgtgtcgtgtcc 7171476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 308
Target Start/End: Original strand, 8587017 - 8587106
Alignment:
Q  222 tgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||||||||||||   ||| |||| ||| |||||||||| |||||||| ||| ||||||| ||||||||| |||||||| |||||    
T  8587017 tgtccgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtcc 8587106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 272
Target Start/End: Original strand, 8789493 - 8789599
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgt--tagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctc 265  Q
    ||||||| ||||||||||||||||||||||  ||||||   | || |||||||||||||||||||||||   | ||| |||  ||| |||||||||||||    
T  8789493 aagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataattacacggaattatgtgattttctc 8789592  T
Q  266 aaattat 272  Q
    |||||||    
T  8789593 aaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 14216908 - 14216867
Alignment:
Q  266 aaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  14216908 aaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtc 14216867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 14223037 - 14222996
Alignment:
Q  266 aaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  14223037 aaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtc 14222996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 306
Target Start/End: Original strand, 15999957 - 16000099
Alignment:
Q  173 gcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgt------ccgacaccgacacttattg---cactaaatcatgtgattttc 263  Q
    ||||| |||||||| ||||||||||||| |||||||  || | |||||||||      ||||||||||||||| | |   |||| ||| |||| |||||     
T  15999957 gcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgtacgtgtccgacaccgacacttgtagttacactgaattatgttattttt 16000056  T
Q  264 tcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 306  Q
    | |||||||||||||||||| ||||||||| || |||||||||    
T  16000057 ttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgt 16000099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 2620074 - 2620138
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| ||||||||||||||||| |||||| |||||| ||||||||| |||| |||||||||    
T  2620074 cacttaattatgtgattttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtgtcc 2620138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 3164046 - 3164110
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||||||||| |||||||||||| |||||||||||| || | ||||||||||||||    
T  3164046 cactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtcc 3164110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 171 - 290
Target Start/End: Complemental strand, 35223052 - 35222930
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||||||||||||| | |||||| || |||| ||| | ||||| ||||||||||||||||   | ||| || | ||| |||||||||||| ||    
T  35223052 aagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattacattgaattatgtgattttctaaa 35222953  T
Q  268 attattagttgtgtcgacgtgtc 290  Q
    | | |||||||||||| ||||||    
T  35222952 aatgttagttgtgtcggcgtgtc 35222930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 302
Target Start/End: Original strand, 10318025 - 10318113
Alignment:
Q  216 gtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    |||||||| |||||||||||||||||   | |||||||  |||||| ||| |||||||||||| ||||||| ||||||||| ||||||||    
T  10318025 gtgtcgtgcccgacaccgacacttatatttacactaaaa-atgtgactttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 10318113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 303
Target Start/End: Original strand, 11493382 - 11493441
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcg 303  Q
    |||| ||| |||||||||||||| ||||||||| |||||||||||||| | |||||||||    
T  11493382 cactgaattatgtgattttctcacattattagtggtgtcgacgtgtcaatgtccgtgtcg 11493441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 24204986 - 24205126
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtc-gtgtccgacaccgacacttat---tgcactaaatcatgtgattttctca 266  Q
    ||||||| |||||||||| ||||||||||| | |||||  || | | ||| ||||||||||| |||||||||   | ||||  || |||| |||||||||    
T  24204986 aagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgacac-gacacttataattacactgtattatgtcattttctca 24205084  T
Q  267 aattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||   |||||| ||||||||| ||||||||||||||    
T  24205085 aattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtcc 24205126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 4987233 - 4987291
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    |||||||||||||||||||||| |||||||  || | ||||||||||| ||||||||||    
T  4987233 acactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 4987291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 13620783 - 13620837
Alignment:
Q  242 tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatc 296  Q
    |||||| ||||||||||||||||||||||| |||  |||||||| ||||||||||    
T  13620783 tgcactgaatcatgtgattttctcaaattactagcggtgtcgacatgtcagtatc 13620837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 15796228 - 15796294
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| |||||| | |||||||||||||||||||||| || | |||| |||||||||||| ||||    
T  15796228 aagcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacac 15796294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 299
Target Start/End: Complemental strand, 27505365 - 27505229
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtc-----cgacaccgacactt---attgcactaaatcatgtgatttt 262  Q
    ||||||| |||||||||||||||||| ||| |||||||  || | ||||||||||     ||||||||||||||   ||| |||| ||| ||||||||||    
T  27505365 aagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacacgacaccgacacttgtaattacacttaattatgtgatttt 27505266  T
Q  263 ctcaaattattagttgtgtcgacgtgtcagtatccgt 299  Q
       |||||||||| ||||||| | |||| ||||||||    
T  27505265 taaaaattattagctgtgtcggcttgtccgtatccgt 27505229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 750648 - 750704
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtc-agtatccgtgtcgtgtcc 308  Q
    ||||||| || |||||||||||||||||||| |||||| ||| ||||||||||||||    
T  750648 atgtgatattttcaaattattagttgtgtcgccgtgtcaagtgtccgtgtcgtgtcc 750704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 10268507 - 10268567
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 304  Q
    |||||||| |||||||||| |||||||||||  ||||||| ||||||||| ||| ||||||    
T  10268507 cactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccatgtcgt 10268567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 14840312 - 14840376
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||||||||||| ||||||||| | |||| | |||||| |||||||||||||||||    
T  14840312 cactgaattatgtgattttctgaaattattaatggtgttggcgtgtcggtatccgtgtcgtgtcc 14840376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 24633360 - 24633412
Alignment:
Q  185 ctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    |||| ||||||||||| ||||||||||| | ||||||||||| ||||||||||    
T  24633360 ctcgaattaggcgtgtaccggtgttagacaagtgtcgtgtccaacaccgacac 24633412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 26508148 - 26508084
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||||||||| |||||||||||| ||||||  |||||||||||| || ||||||||    
T  26508148 cactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatctgtatcgtgtcc 26508084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 49651721 - 49651777
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccg 227  Q
    ||||||| ||||| ||||||||||| |||| |||||||  |||||||||||||||||    
T  49651721 aagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccg 49651777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 9800069 - 9800014
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||||||||||||||||||  |||||| ||||||||| | ||||||||||||    
T  9800069 atgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcc 9800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 41961680 - 41961735
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||| || ||||||||||||||||| || ||||||||| || |||||||||||    
T  41961680 atgtgatattttcaaattattagttgtgacggcgtgtcagtgtctgtgtcgtgtcc 41961735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 3631796 - 3631738
Alignment:
Q  173 gcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacac 231  Q
    ||||| |||||||||||| ||||||||| | |||||  || ||||||||||||||||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgacac 3631738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 34910355 - 34910309
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtc 290  Q
    |||| ||| |||||||||| |||||||||||||||||||| ||||||    
T  34910355 cactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 34910309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 41961584 - 41961650
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| ||||| |||||||||||||||| || ||||  || | ||||||||||||| ||||||||    
T  41961584 aagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 41961650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 282
Target Start/End: Complemental strand, 1509598 - 1509539
Alignment:
Q  226 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtc 282  Q
    ||||||||||||||   ||| |||||||| |||||||||| |||||||||||| ||||||    
T  1509598 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 1509539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 302
Target Start/End: Original strand, 3865586 - 3865635
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    ||||| |||| |||||||||||| ||||||| ||||||||| ||||||||    
T  3865586 atgtggttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 3865635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 4987312 - 4987361
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 293  Q
    |||| ||| |||||||||| |||||||||||| ||||||| |||||||||    
T  4987312 cactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 4987361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 25065031 - 25064966
Alignment:
Q  172 agcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    |||||| ||||||||||||| |  ||||| ||||||| ||| | ||||||||||||||||| ||||    
T  25065031 agcacgaacactcctcggataaaccgtgtcccggtgtcagacacgtgtcgtgtccgacaccaacac 25064966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 34185057 - 34185094
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgt 208  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  34185057 aagcacggacactcctcggattaggcgtgtcccggtgt 34185094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 208
Target Start/End: Complemental strand, 40052426 - 40052389
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgt 208  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  40052426 aagcacgaacactcctcggattaggcgtgtcccggtgt 40052389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 12704045 - 12703989
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtg 300  Q
    |||| ||| ||||| |||||||||||||||||| |||||| ||||||  ||||||||    
T  12704045 cactgaattatgtgcttttctcaaattattagtggtgtcggcgtgtccatatccgtg 12703989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 14979219 - 14979155
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||||||||| |||||||||||| ||||||| |||| || | ||| ||||||||||    
T  14979219 cactgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtccttgtcgtgtcc 14979155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 15796327 - 15796379
Alignment:
Q  256 tgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||| |||||||||||  ||||||| ||||||| | ||||||||||||||    
T  15796327 tgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtcc 15796379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 25064947 - 25064883
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||| |||||||||| |||||| |||||  |||||| ||||||| | || |||||||||||    
T  25064947 cactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtcc 25064883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 26290400 - 26290360
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagt 293  Q
    |||||||||||||||||||||| | |||||| |||||||||    
T  26290400 atgtgattttctcaaattattaatggtgtcggcgtgtcagt 26290360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 40052361 - 40052321
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagt 293  Q
    |||||||||| |||||||||||| ||||||| |||||||||    
T  40052361 atgtgattttttcaaattattagctgtgtcggcgtgtcagt 40052321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 49505148 - 49505206
Alignment:
Q  220 cgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattag 275  Q
    |||||||||||| ||||| |||   | |||||||| |||||||||||||||||||||||    
T  49505148 cgtgtccgacactgacacatataattacactaaattatgtgattttctcaaattattag 49505206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 9e-30; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 171 - 300
Target Start/End: Original strand, 22515832 - 22515964
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||||||||||||||||||||||  ||||||  |||||||||||||||||||||||||||||   ||| |||||||| |||||||||| ||||    
T  22515832 aagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaa 22515931  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtg 300  Q
    |||||||| ||||||  |||||| || ||||||    
T  22515932 attattagctgtgtctgcgtgtccgtgtccgtg 22515964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 38078606 - 38078740
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| | |||||||||||||||||||| | ||||||  | ||||||||||||||||||||||||||   ||| || | ||| |||||||||| ||||    
T  38078606 aagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaa 38078705  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    |||||||| ||||||||||||||||| | ||||||    
T  38078706 attattagctgtgtcgacgtgtcagtgttcgtgtc 38078740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 46348328 - 46348462
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| |||| |||||||| ||||||||  ||||||  || | ||||||||||||||||||||||||   ||| |||||||| || ||||||| ||||    
T  46348328 aagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgattttttcaa 46348427  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    |||||||| ||||||| ||||||||| ||||||||    
T  46348428 attattagctgtgtcggcgtgtcagtgtccgtgtc 46348462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 298
Target Start/End: Complemental strand, 37598945 - 37598816
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| |||||||||||||||||||||| ||  |||  || | ||||||||||||||||||||||||   ||| |||| |||  ||||||||| ||||    
T  37598945 aagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaat-ttgtgattttttcaa 37598847  T
Q  268 attattagttgtgtcgacgtgtcagtatccg 298  Q
    |||||||||||||||| ||||||||| ||||    
T  37598846 attattagttgtgtcggcgtgtcagtgtccg 37598816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 179 - 304
Target Start/End: Original strand, 1486657 - 1486790
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacac-----cgacacttat---tgcactaaatcatgtgattttctcaaatt 270  Q
    |||||||||||||||||||||| |||||||  || | ||||||||||||||||     ||||||||||   | |||| ||| |||||||||| |||||||    
T  1486657 acactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgattttttcaaatt 1486756  T
Q  271 attagttgtgtcgacgtgtcagtatccgtgtcgt 304  Q
    ||||| ||||||  ||||||||||||||||||||    
T  1486757 attagctgtgtcagcgtgtcagtatccgtgtcgt 1486790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 216 - 293
Target Start/End: Original strand, 22881606 - 22881686
Alignment:
Q  216 gtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 293  Q
    ||||||||||||||||||||||||   ||| |||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  22881606 gtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagt 22881686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 1815362 - 1815240
Alignment:
Q  180 cactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagt 276  Q
    |||||||| |||||||||||| |||||||  || |||||||||||| |||||||||||||   ||| |||| ||| |||||||||| | |||| |||| |    
T  1815362 cactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgattttttaaaataattatt 1815263  T
Q  277 tgtgtcgacgtgtcagtatccgt 299  Q
    ||||||| ||||||||| |||||    
T  1815262 tgtgtcggcgtgtcagtgtccgt 1815240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 171 - 306
Target Start/End: Original strand, 42359394 - 42359532
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| |||||||||||||||||||||| |||||||  || |   ||| ||||||||||||||||||   ||| |||| |||  ||||||||| ||||    
T  42359394 aagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgattttttcaa 42359493  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtcgtgt 306  Q
    |||||||| ||||||  ||||||||| ||||||| ||||    
T  42359494 attattagatgtgtcagcgtgtcagtgtccgtgttgtgt 42359532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 47989622 - 47989556
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| |||||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||||||    
T  47989622 aagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacac 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 179 - 283
Target Start/End: Original strand, 40258886 - 40258993
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 275  Q
    |||||||||||||||||||||| | |||||  || | |||||||||| |||||||||||||   ||| |||| ||| |||||||||| |||||||||||     
T  40258886 acactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttttcaaattattaa 40258985  T
Q  276 ttgtgtcg 283  Q
    ||||||||    
T  40258986 ttgtgtcg 40258993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 308
Target Start/End: Original strand, 5898209 - 5898351
Alignment:
Q  169 taaagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctc 265  Q
    ||||||||| |||||||||||||||| ||||| |||||||| || | |||||||||| ||||||||| |   | ||| |||| ||| |||||||||| ||    
T  5898209 taaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgattttttc 5898308  T
Q  266 aaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    | ||||||||  |||||| ||| ||||| || ||||| |||||    
T  5898309 agattattagcggtgtcggcgtctcagtgtctgtgtcatgtcc 5898351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 31694644 - 31694710
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| ||||||||| ||||||||||||||||||||   |||||||| |||||||||||||||||    
T  31694644 aagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacac 31694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 308
Target Start/End: Complemental strand, 40917779 - 40917725
Alignment:
Q  254 tgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||    
T  40917779 tgtgattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtcc 40917725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 283
Target Start/End: Complemental strand, 51410139 - 51410023
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtga-ttttctca 266  Q
    ||||||| | |||||| |||||||||||||  ||||||  |||| ||||||||||||||||||||||||   ||| |||| ||| |||||| |||| |||    
T  51410139 aagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttca 51410040  T
Q  267 aattattagttgtgtcg 283  Q
    ||||||||| |||||||    
T  51410039 aattattagatgtgtcg 51410023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 275
Target Start/End: Complemental strand, 40181976 - 40181878
Alignment:
Q  180 cactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaaattattag 275  Q
    ||||||||||||||||||||| |||||||  || | |||| |||||||||||||| ||   | ||| |||| ||| |||||||||||||||||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattag 40181878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 34298474 - 34298411
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    |||| ||| |||||||||||||||||||||||| ||||||  |||||||| |||||||||||||    
T  34298474 cactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtc 34298411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 5927285 - 5927425
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||||||||| |||||||| |||| || |||  || || |||| |||||||||| |||||||   ||| || ||||| || ||||||| ||||    
T  5927285 aagcacggacactcctcagattaggcatgtttcgatgtcggacatttgtcatgtccgacactgacacttgtaattacattaaattatatgattttttcaa 5927384  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||  ||||   ||||||||| ||||||||||||||    
T  5927385 attattagcagtgttagcgtgtcagtgtccgtgtcgtgtcc 5927425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 307
Target Start/End: Complemental strand, 9103703 - 9103615
Alignment:
Q  221 gtgtccgacaccgacactt--attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    |||||||||||||||||||  |||  ||||||| |||||||||| |||||||||||  ||||||| ||||||||| |||| ||| ||||    
T  9103703 gtgtccgacaccgacacttgtattaaactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgagtcctgtc 9103615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 16297226 - 16297368
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacacc---gacactt--attgcactaaatcatgtgattttctc 265  Q
    ||||||| |||||||||||||||||||||| | |||||  || |   |||||||||||||||   |||| |   ||| |||| |||  ||||||||| ||    
T  16297226 aagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacaccccggacattgtaattacactgaattttgtgattttttc 16297325  T
Q  266 aaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    | |||||| | ||||||||||||||||||||||| ||||||||    
T  16297326 atattatttgctgtgtcgacgtgtcagtatccgtatcgtgtcc 16297368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 398786 - 398850
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||||||||| ||||||||||||  |||||| ||||||||| ||||||||||||||    
T  398786 cactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtcc 398850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 2896142 - 2896206
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||||||||||||||||||||||  |||||| ||||||||| ||||||| ||||||    
T  2896142 cactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtcc 2896206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 12443481 - 12443537
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtg 300  Q
    |||| ||| ||||||||||||||||||||||| ||||||| |||||| |||||||||    
T  12443481 cactgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtatccgtg 12443537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 307
Target Start/End: Original strand, 41877464 - 41877554
Alignment:
Q  220 cgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    ||||||||||||||||||||   ||| |||||||| |||| ||||||||||||||||||  |||||| |||  |||| || ||||||||||    
T  41877464 cgtgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgtc 41877554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 48450608 - 48450672
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||| |||| ||||| |||||||||||| ||||| | ||||||||| ||||||||||||||    
T  48450608 cactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtcc 48450672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 1262913 - 1262858
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||||||||||||||||| ||||||| |||||| || | ||||||||||||    
T  1262913 atgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtcc 1262858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 10572619 - 10572674
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||||||||||||||||||| |||||| ||||||||| | | ||||||||||    
T  10572619 atgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgtcc 10572674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 273
Target Start/End: Complemental strand, 18337443 - 18337338
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||||||||||||| |||| ||| || ||||  || | |||| |||||||||||||||||||   ||| |||| ||| |||||||||| ||||    
T  18337443 aagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaa 18337344  T
Q  268 attatt 273  Q
    ||||||    
T  18337343 attatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 32461398 - 32461464
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| ||||| || ||||||||||||| || |||| ||| | ||||||||||||||||||||||    
T  32461398 aagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac 32461464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 40917874 - 40917808
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| ||| |||||||||||||||||| |||||||  || | ||||||||||| ||||||||||    
T  40917874 aagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 40917808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 282
Target Start/End: Original strand, 18190060 - 18190167
Alignment:
Q  178 tacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattatta 274  Q
    |||||||||||||||||| |||| |||||||  || | |||| ||||| |||| ||||||||   ||| |||| ||| |||| ||||| |||||||||||    
T  18190060 tacactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatgtaattttttcaaattatta 18190159  T
Q  275 gttgtgtc 282  Q
    | ||||||    
T  18190160 ggtgtgtc 18190167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 305
Target Start/End: Complemental strand, 31015140 - 31015020
Alignment:
Q  182 ctcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttattgcactaaatcatgtgattttctcaaattattagttgtgt 281  Q
    ||||| ||||||||||||| ||| ||| ||| | ||||||||||||||||    | |||   |||| ||| ||||||||||||||||||||||| |||||    
T  31015140 ctccttggattaggcgtgtcccgatgtcagacacgtgtcgtgtccgacacttgtaatta---cactgaattatgtgattttctcaaattattagctgtgt 31015044  T
Q  282 cgacgtgtcagtatccgtgtcgtg 305  Q
     | || ||||||  ||||||||||    
T  31015043 aggcgcgtcagtgcccgtgtcgtg 31015020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 46940753 - 46940790
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgt 208  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  46940753 aagcacgaacactcctcggattaggcgtgttccggtgt 46940790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 281
Target Start/End: Original strand, 14332634 - 14332700
Alignment:
Q  218 gtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgt 281  Q
    ||||||||||||||||| || |||   | |||||||| |||||||||||||||||||||||| ||||    
T  14332634 gtcgtgtccgacaccgagacatataattacactaaattatgtgattttctcaaattattagtggtgt 14332700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 14359543 - 14359606
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||| |||||||||| |||||||||||| ||||||| |||||| || || |||||||||||    
T  14359543 cactaaattatgtgatttt-tcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtcc 14359606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 15323201 - 15323137
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||| |||||||||| |||||||||||  ||| ||||| ||||||| ||| ||||||||||    
T  15323201 cactaaattatgtgattttttcaaattattaactgtatcgacatgtcagtgtccatgtcgtgtcc 15323137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 15641051 - 15641115
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| |||||||||||||||| ||||||||||  |||||| | ||||||| |||||||| |||||    
T  15641051 cactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtcc 15641115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 19637872 - 19637816
Alignment:
Q  181 actcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||||||||||| | || |||||||  ||||||| |||||||||||||||||||    
T  19637872 actcctcggattaggggcgtcccggtgtcggatatgtatcgtgtccgacaccgacac 19637816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 20157371 - 20157435
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||||||||||||| ||||||||  ||||||| ||||||||  |||||||||||||    
T  20157371 cactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtcc 20157435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 36878532 - 36878450
Alignment:
Q  214 atgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 293  Q
    |||| ||||||| ||||||||||| |||   | |||| ||| |||||||||||||||||||||||  |||||| |||||||||    
T  36878532 atgtttcgtgtcagacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 36878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 308
Target Start/End: Original strand, 5376500 - 5376585
Alignment:
Q  226 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||||||||   ||| |||| ||| |||| ||||||| ||||||||||  |||||| ||||| ||| ||||||||||||||    
T  5376500 cgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtcc 5376585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 6427379 - 6427324
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||||||||||||||||||  |||| | ||||||||| |||||| |||||||    
T  6427379 atgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtcc 6427324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 302
Target Start/End: Original strand, 18556480 - 18556535
Alignment:
Q  247 taaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    ||||| ||||||| || |||||||||||| ||||||| ||||||||| ||||||||    
T  18556480 taaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 18556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 29163317 - 29163392
Alignment:
Q  162 aaaccagtaaagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    |||||| | ||||||| ||||| ||| |||||| ||||| ||||||| ||  | ||||||||||||||||||||||    
T  29163317 aaaccaatgaagcacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgacac 29163392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 275
Target Start/End: Complemental strand, 29229499 - 29229468
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattag 275  Q
    ||||||||||||||||||||||||||||||||    
T  29229499 cactaaatcatgtgattttctcaaattattag 29229468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 5944408 - 5944342
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| |||||||||||||||||||| | |||||||  || |||||| ||||||| || ||||||    
T  5944408 aagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacac 5944342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 9709849 - 9709795
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    |||||||||||||||||||||||  |||| | | ||||||| |||||||||||||    
T  9709849 atgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtc 9709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 9828169 - 9828103
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| |||||||||||||||| ||||| |||||||  || | |||||||||| ||||| |||||    
T  9828169 aagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacac 9828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 25934741 - 25934675
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| |||||||| |||| |||||| | || |||| ||| | ||||||||||||||||||||||    
T  25934741 aagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacac 25934675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 17831552 - 17831601
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 293  Q
    |||| ||| |||||||||||||||||||||||  |||||| |||||||||    
T  17831552 cactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagt 17831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 21530760 - 21530697
Alignment:
Q  214 atgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattatta 274  Q
    ||||||||||||||||||||||||||||   |  || |||| || |||||||||||||||||||    
T  21530760 atgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattatta 21530697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 24577186 - 24577245
Alignment:
Q  226 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtc 282  Q
    ||||||||||||||   ||| |||| ||| |||||||||| |||||||||||||||||||    
T  24577186 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtc 24577245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 29144325 - 29144362
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgt 208  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  29144325 aagcacggacactcttcggattaggcgtgttccggtgt 29144362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 33203017 - 33202956
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacacc 232  Q
    |||||| || ||||||||||||||||||||  ||||||  ||||||| ||||||| ||||||    
T  33203017 aagcacatatactcctcggattaggcgtgtcacggtgtcggatatgtatcgtgtctgacacc 33202956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 308
Target Start/End: Original strand, 39130757 - 39130852
Alignment:
Q  216 gtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| |||||||||||||||||   | ||| |||||||| || | ||||||| ||||||||| | |||||  ||||||| ||||| ||||||||||    
T  39130757 gtgttgtgtccgacaccgacacatataattacactaaattatataattttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtcc 39130852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 113337 - 113289
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcag 292  Q
    |||| ||| |||||||||| |||||||||||| ||||||| ||||||||    
T  113337 cactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 609488 - 609528
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagt 293  Q
    |||| ||||||||||||||||||| |||||| |||||||||    
T  609488 atgtaattttctcaaattattagtggtgtcggcgtgtcagt 609528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 2851059 - 2851000
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 304  Q
    |||| ||| |||| ||||| ||||||||||||  |||| ||||||||||||||||||||||    
T  2851059 cactgaattatgtaattttatcaaattattagcggtgt-gacgtgtcagtatccgtgtcgt 2851000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 7918232 - 7918296
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| ||||||||||||||||||||||||  ||||  ||||||| | || |||||||||||    
T  7918232 cactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtcc 7918296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 32461487 - 32461531
Alignment:
Q  247 taaatcatgtgattttctcaaattattagttgtgtcgacgtgtca 291  Q
    ||||| |||||||||| ||||||||||||||||| || |||||||    
T  32461487 taaattatgtgattttttcaaattattagttgtgccggcgtgtca 32461531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 34257931 - 34257995
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||| |||||||||| | |||||||||   |||||||||||||| ||||||| || |||||    
T  34257931 cactaaattatgtgattttattaaattattaacggtgtcgacgtgtcaatatccgtatcatgtcc 34257995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 48040503 - 48040547
Alignment:
Q  264 tcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||||||  ||||||| ||||||||| ||||||||||||||    
T  48040503 tcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 48040547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 308
Target Start/End: Complemental strand, 8912 - 8772
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| | ||||||| ||||||||||||  ||||||  || | ||||||||||||||||||||||||   ||| |||||||| || ||||||| ||||    
T  8912 aagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgattttttcaa 8813  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||| ||||||| ||||||||| ||||||||||||||    
T  8812 attattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 8772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 18840958 - 18841098
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||||||||||||||||| |||| |||||||  || |||||||||||| |||||||||||||   ||| |||| ||| |||| ||||| ||||    
T  18840958 aagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattttttcaa 18841057  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||||||||||  ||||||||| ||| ||||||||||    
T  18841058 attattagttgtgtcagcgtgtcagtgtccatgtcgtgtcc 18841098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 2438664 - 2438778
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| |||||||||||||||||||||| |||||||  || ||||||||||||||||||||||||||   ||| |||| ||| |||||||||| | ||    
T  2438664 aagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaa 2438763  T
Q  268 attattagttgtgtc 282  Q
    |||||||| ||||||    
T  2438764 attattagctgtgtc 2438778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 37559091 - 37558957
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||||||||||||||| |||||| |||||||  || | |||||  |||||||||||||||||   ||| || | ||| ||||||||||  |||    
T  37559091 aagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttttacaa 37558992  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    |||||||| ||||||| ||||||||| ||||||||    
T  37558991 attattagctgtgtcggcgtgtcagtgtccgtgtc 37558957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 308
Target Start/End: Original strand, 20539674 - 20539759
Alignment:
Q  226 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||||||||   ||| |||||||| || ||||||| |||||||||||| ||||||||||||||||| ||||||||||||||    
T  20539674 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtcc 20539759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 171 - 304
Target Start/End: Complemental strand, 15972987 - 15972851
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||| || |||||||||| |||| |||| ||  || | ||||||||||||||||||||||||   ||| |||| |||  ||| ||||| ||||    
T  15972987 aagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattgtgtaattttttcaa 15972888  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtcgt 304  Q
    ||||||| |||||||| ||||||||| ||||||||||    
T  15972887 attattaattgtgtcggcgtgtcagtgtccgtgtcgt 15972851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 38117104 - 38117229
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| |||| ||||||||||||||||| |||||||  || | |||| |||||||||||| ||||||   ||| |||  ||  |||||||||| ||||    
T  38117104 aagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgattttttcaa 38117203  T
Q  268 attattagttgtgtcgacgtgtcagt 293  Q
    |||||||| ||||||| |||||||||    
T  38117204 attattagctgtgtcggcgtgtcagt 38117229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 308
Target Start/End: Original strand, 19536391 - 19536483
Alignment:
Q  220 cgtgtccgacaccgacactt---attgcactaaatcatgtgattttct-caaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||||||||||||||   ||| |||| ||| |||||||||| | ||||||||||||||||||| ||||||| | ||||||||||||||    
T  19536391 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtcc 19536483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 276
Target Start/End: Complemental strand, 5367289 - 5367198
Alignment:
Q  188 ggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaaattattagt 276  Q
    ||||||||||||| |||| ||  |||||||||||||||||||||||||||   | ||| |||| ||| ||||||||| ||||||||||||||    
T  5367289 ggattaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattattagt 5367198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 307
Target Start/End: Original strand, 20242680 - 20242811
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattag 275  Q
    |||||| |||||| |||||||| |  |||| ||| | |||| ||||||||||||||||| |||   | |||| ||| |||||||||||| |||  |||||    
T  20242680 acactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacacatataattacactgaattatgtgattttctaaaaaaattag 20242779  T
Q  276 ttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    |||||||| ||||||||| ||| |||||||||    
T  20242780 ttgtgtcggcgtgtcagtgtccatgtcgtgtc 20242811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 308
Target Start/End: Original strand, 30404813 - 30404935
Alignment:
Q  189 gattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgac 285  Q
    |||||||| ||| | |||||  || |||||||||||||||| |||||||||   ||| |||| ||| |||||||||| |||||||||||   |||||| |    
T  30404813 gattaggcatgtcctggtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggc 30404912  T
Q  286 gtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||| |||||||| |||||    
T  30404913 gtgtcagtgtccgtgtcatgtcc 30404935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 12940968 - 12941019
Alignment:
Q  256 tgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||||||||||    
T  12940968 tgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtcgtgtc 12941019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 307
Target Start/End: Original strand, 14996172 - 14996308
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtcc-----gacaccgacactt---attgcactaaatcatgtga-ttttctcaaat 269  Q
    |||||||||||||||||||||||||||||| ||| | |||| ||||||     |||||||||||||   ||| |||||||| || ||| |||| ||||||    
T  14996172 acactcctcggattaggcgtgttccggtgtcagacacgtgt-gtgtccgacaagacaccgacacttgtaattacactaaattatatgatttttttcaaat 14996270  T
Q  270 tattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    |||||| ||||||| | ||||||| |||||||| ||||    
T  14996271 tattagctgtgtcggcttgtcagtgtccgtgtcatgtc 14996308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 304
Target Start/End: Complemental strand, 31018655 - 31018568
Alignment:
Q  220 cgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 304  Q
    |||||||||||||||||| |||   | ||||||||||||||||||||| ||||||||||  |||| | ||||||||| ||| ||||||    
T  31018655 cgtgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagtgtccatgtcgt 31018568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 21616800 - 21616737
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    |||| ||| |||||||||||||||||||||||  |||||| |||||| || |||||||||||||    
T  21616800 cactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 30335455 - 30335392
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    |||||||| |||| ||||| |||||||||||||||||||| ||||  ||| |||||||||||||    
T  30335455 cactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtgtc 30335392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 34785003 - 34785066
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    |||||||| |||||||||||| |||  |||||||||||||  |||||||| |||||||||||||    
T  34785003 cactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgtgtc 34785066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 304
Target Start/End: Original strand, 36756344 - 36756425
Alignment:
Q  226 cgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 304  Q
    ||||||||||||||||   | |||| ||| |||| ||||  |||||||||||||||||||||||||||||| || |||||||    
T  36756344 cgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgt 36756425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 24009409 - 24009343
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| |||||||| |||| |||||||| || |||| ||| | ||||||||||||||||||||||    
T  24009409 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 24009343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 28596583 - 28596513
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat 241  Q
    ||||||| ||||||||||||||||| |||| |  ||||  || | ||||||||||||||||||||||||||    
T  28596583 aagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacacttat 28596513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 35056993 - 35056927
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| ||||||||| ||||||||||||| | ||||  || | ||||||||||||||||||||||    
T  35056993 aagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacac 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 37419868 - 37419802
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| |||||||||||||||||||||| |||||||  || | |  |||||||||||||||||||    
T  37419868 aagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacac 37419802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 11223798 - 11223858
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacacc 232  Q
    ||||||| ||||||||| |||||||||||| ||||||| ||| | |||||||||||||||||    
T  11223798 aagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacc 11223858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 19942371 - 19942314
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgaca 236  Q
    |||||||||||||||||||||| ||||||| ||| |  || |||||||||||||||||    
T  19942371 acactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 26769636 - 26769571
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgaca 236  Q
    ||||||| |||||||||||||||||||||| || ||||  || | ||||||||||||| |||||||    
T  26769636 aagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgaca 26769571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 27084375 - 27084318
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgaca 236  Q
    ||||||||| ||||||||||||  ||||||| || | |||||||||||||||||||||    
T  27084375 acactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtccgacaccgaca 27084318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 36409630 - 36409711
Alignment:
Q  227 gacaccgacactta-ttgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    ||||||||||| || || |||||||| |||||||||| ||||||||| ||  |||||| | ||| |||||||||||||||||    
T  36409630 gacaccgacacataattacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtc 36409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 301
Target Start/End: Original strand, 12668423 - 12668501
Alignment:
Q  226 cgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgt 301  Q
    ||||||||||||||||   | |||| ||| |||| ||||| |||||||||||||| ||||| |||||||||||| ||||    
T  12668423 cgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtcagtatctgtgt 12668501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 15657902 - 15657838
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| ||||||||||  |||||||||||||| |||| ||||| ||| ||||||||||||||    
T  15657902 cactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgtgtcgtgtcc 15657838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 21782839 - 21782903
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||||||||||||||||||||||  |||||| ||||||||| |  |||||||||||    
T  21782839 cactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtcc 21782903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 31727885 - 31727837
Alignment:
Q  254 tgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    ||||||||||||||||||||||| |||||  |||||||||||| |||||    
T  31727885 tgtgattttctcaaattattagtagtgtcagcgtgtcagtatctgtgtc 31727837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 291
Target Start/End: Complemental strand, 33498652 - 33498619
Alignment:
Q  258 attttctcaaattattagttgtgtcgacgtgtca 291  Q
    ||||||||||||||||| ||||||||||||||||    
T  33498652 attttctcaaattattacttgtgtcgacgtgtca 33498619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 11670784 - 11670744
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagt 293  Q
    |||||||||| ||||||||||||| | ||||||||||||||    
T  11670784 atgtgattttttcaaattattagtggcgtcgacgtgtcagt 11670744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 12224329 - 12224269
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt 239  Q
    |||||||| ||||||||||||| || ||||  || | || |||||||||||||||||||||    
T  12224329 acactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacactt 12224269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 12464875 - 12464919
Alignment:
Q  249 aatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 293  Q
    |||||||| ||||||||||||||||| | |||||| |||||||||    
T  12464875 aatcatgtcattttctcaaattattattggtgtcggcgtgtcagt 12464919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 295
Target Start/End: Original strand, 18420436 - 18420506
Alignment:
Q  228 acaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtat 295  Q
    ||||||||||||||   |||| | ||| |||||||||||||||||||||||  |||| | |||||||||||    
T  18420436 acaccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgtcagtat 18420506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 23718064 - 23718000
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||||| ||||||||||||||||  ||||||  |||||||| |||||||| |||||    
T  23718064 cactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc 23718000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 24105736 - 24105672
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||||| ||||||||||||||||  ||||||  |||||||| |||||||| |||||    
T  24105736 cactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc 24105672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 276
Target Start/End: Complemental strand, 25846779 - 25846747
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagt 276  Q
    |||| ||||||||||||||||||||||||||||    
T  25846779 cactgaatcatgtgattttctcaaattattagt 25846747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 174 - 307
Target Start/End: Complemental strand, 33994323 - 33994187
Alignment:
Q  174 cacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaatt 270  Q
    |||| |||||||| |||||||||||||  ||||||| || |||||||||||| |||||||||||||   |||||||| ||| ||||||  || |||||||    
T  33994323 cacgaacactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgacacttgtaattgcactgaattatgtgaccttttcaaatt 33994224  T
Q  271 attagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    | |||||| |||| ||||||||| | |||||||||||    
T  33994223 agtagttgcgtcggcgtgtcagtgttcgtgtcgtgtc 33994187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 179 - 307
Target Start/End: Complemental strand, 26733410 - 26733279
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 275  Q
    |||| |||||||||||||||||||| || |  || ||| |||||||||||||||||||| |   |||  ||| ||| |||||||||| ||||||||||||    
T  26733410 acacccctcggattaggcgtgttcccgtatcggacatgcgtcgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattag 26733311  T
Q  276 ttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
      |||||||||||||||| |||||||||||||    
T  26733310 cggtgtcgacgtgtcagtgtccgtgtcgtgtc 26733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 293
Target Start/End: Complemental strand, 41020593 - 41020485
Alignment:
Q  188 ggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcga 284  Q
    ||||||| ||||| ||||||||||||||||||||||| | |||||||| | |||   | |||||||| ||||||||||   |||||||||||||||||||    
T  41020593 ggattagacgtgtcccggtgttagatatgtgtcgtgttcaacaccgacgcatataattacactaaattatgtgatttttgtaaattattagttgtgtcga 41020494  T
Q  285 cgtgtcagt 293  Q
    |||||||||    
T  41020493 cgtgtcagt 41020485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 307
Target Start/End: Complemental strand, 598322 - 598183
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||||| |||||||||||||||| |||||||  || | |||||||||| |||||||||||||   ||| || | ||| | |||||||||| ||    
T  598322 aagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgattttcttaa 598223  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    ||||||||  ||||||| |||||||| |||||||| ||||    
T  598222 attattagcggtgtcgatgtgtcagtgtccgtgtcatgtc 598183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 275
Target Start/End: Complemental strand, 21880266 - 21880159
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||||| |||||||||||||||| | |||||  || ||||||||||||||||||||||||||   ||| |||| ||| |||| ||||||||||    
T  21880266 aagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaa 21880167  T
Q  268 attattag 275  Q
    ||||||||    
T  21880166 attattag 21880159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 304
Target Start/End: Original strand, 5409776 - 5409917
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacac-----cgacactt---attgcactaaatcatgtgatttt 262  Q
    ||||||| |||||||||||||||||||||| |||||||  || | ||||||||||||||||     ||||||||   |||||||| ||| ||||||||||    
T  5409776 aagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgtgatttt 5409875  T
Q  263 ctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 304  Q
     |||||||||||| ||| ||  ||||||||| ||| ||||||    
T  5409876 ttcaaattattagctgtatcagcgtgtcagtgtccatgtcgt 5409917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 179 - 307
Target Start/End: Original strand, 18212986 - 18213118
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttct-caaattatta 274  Q
    ||||||||||||| |||||||| || |||| ||| | | ||||||||||||||||||||   | ||| |||||||| ||||||||||||  |||  ||||    
T  18212986 acactcctcggataaggcgtgtccccgtgtcagaaaggggtcgtgtccgacaccgacacatataattacactaaattatgtgattttctaaaaaaaatta 18213085  T
Q  275 gttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    ||||||||| ||| ||||| |||||||||||||    
T  18213086 gttgtgtcggcgtatcagtgtccgtgtcgtgtc 18213118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 179 - 308
Target Start/End: Complemental strand, 24105784 - 24105652
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 275  Q
    ||||||||||| |||||||||| |||||||  || |  ||| ||| ||||| |||||||||   ||| |||| |||||||  ||||| ||||||||||||    
T  24105784 acactcctcgggttaggcgtgtcccggtgtcggacacatgttgtgcccgactccgacacttgtaattacactgaatcatgcaattttttcaaattattag 24105685  T
Q  276 ttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
     ||||||| ||||||||| ||||||||||||||    
T  24105684 ctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 24105652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 15680923 - 15680789
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| |||||||||| ||||| |||||  ||||||  || | ||||||||||||||||||||||||   ||| |||||||| |||||||||| |  |    
T  15680923 aagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgatttttttta 15680824  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    |||||||| | ||||| ||||||||| ||| ||||    
T  15680823 attattagctatgtcggcgtgtcagtgtccatgtc 15680789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 2034479 - 2034416
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    |||||||| || |||| |||||||||||||||| |||||||||||| |||||||||||||||||    
T  2034479 cactaaattatatgatattctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgtc 2034416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 171 - 308
Target Start/End: Complemental strand, 13770810 - 13770665
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacac-----cgacactt---attgcactaaatcatgtgatttt 262  Q
    ||||||| |||||| |||||||||||||||||||||||  || | |||| |||||||||||     ||||||||   ||| |||| ||| |||| |||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacacgacaacgacacttgtaattacactgaattatgtaatttt 13770711  T
Q  263 ctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
     | |||||||||| ||||||| ||| ||||| ||||||||||||||    
T  13770710 tttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 13770665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 27945100 - 27945015
Alignment:
Q  226 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||||||||   ||| |||| ||| |||| ||||||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  27945100 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtcc 27945015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 171 - 285
Target Start/End: Original strand, 32287408 - 32287525
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactta---ttgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||||||||||||||||| |||| |||||||  || |  |||| |||||||||||||||| ||   ||||||| ||| ||||||||||||||     
T  32287408 aagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattttctcag 32287507  T
Q  268 attattagttgtgtcgac 285  Q
    ||||||||  ||||||||    
T  32287508 attattagcggtgtcgac 32287525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 43027409 - 43027554
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtc-----cgacaccgacacttat---tgcactaaatcatgtgatttt 262  Q
    ||||||| |||||| ||||||||||||||| |||||||  || | ||||||||||     |||||||||||||| |   | ||||  || ||||||||||    
T  43027409 aagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacacgacaccgacacttgtatttacactgcattatgtgatttt 43027508  T
Q  263 ctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
     |||||||||||| || |||| ||||||||| ||||||||||||||    
T  43027509 ttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtcc 43027554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 24339767 - 24339701
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    |||||||  ||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||    
T  24339767 aagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacac 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 304
Target Start/End: Original strand, 11061070 - 11061157
Alignment:
Q  220 cgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 304  Q
    |||||| |||||||||||||   |||  ||||||| |||||||||| |||||||||||| |||||||  |||||||| ||||||||||    
T  11061070 cgtgtctgacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgt 11061157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 308
Target Start/End: Complemental strand, 21864914 - 21864780
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtga--ttttctcaaattatt 273  Q
    |||||||||| ||||| ||||| |||||||  || | ||||||||||||||| ||||||||   ||| |||||||| || |||  |||| ||||||||||    
T  21864914 acactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattatatgattttttttcaaattatt 21864815  T
Q  274 agttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    || ||||||   ||||| || ||||||||||||||    
T  21864814 agctgtgtccgtgtgtccgtgtccgtgtcgtgtcc 21864780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 283
Target Start/End: Complemental strand, 8234243 - 8234145
Alignment:
Q  188 ggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcg 283  Q
    |||||||||||||  ||||||  || |||||||||||||||||||| |||||   | | |||| ||| |||| ||||| ||||||||||||||||||||    
T  8234243 ggattaggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgtgtcg 8234145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 28401173 - 28401117
Alignment:
Q  252 catgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||||||||||||||||||| ||||||||||||  ||  |||||||||||||    
T  28401173 catgtgattttctcaaattattagtagtgtcgacgtgttggtgcccgtgtcgtgtcc 28401117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 11722128 - 11722183
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||||||||||||| ||||  |||||| ||||||||| ||||||||||||||    
T  11722128 atgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtcc 11722183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 293
Target Start/End: Complemental strand, 20549905 - 20549780
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaa 267  Q
    |||||||  |||||||||||||||||||||  |  |||  || |||||| ||||||||||||||||| |||   | |||| ||| | |||||||||||||    
T  20549905 aagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattacgtgattttctcaa 20549806  T
Q  268 attattagttgtgtcgacgtgtcagt 293  Q
    ||||||||  ||||||  ||||||||    
T  20549805 attattagcggtgtcggtgtgtcagt 20549780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 308
Target Start/End: Complemental strand, 25481968 - 25481876
Alignment:
Q  219 tcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||||||||| ||||||   ||| |||| ||| |||||||||| |||||||||||| ||||||| ||||||| | ||| ||| ||||||    
T  25481968 tcgtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtcc 25481876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 3554459 - 3554516
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgaca 236  Q
    |||||| ||| ||||| |||||  | ||||||||||||||||||||||||||||||||    
T  3554459 acactcttcgaattagacgtgtctcagtgttagatatgtgtcgtgtccgacaccgaca 3554516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 2425754 - 2425818
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| ||||||||||||||||||||||   ||| || |||||||||||| |||||||||||    
T  2425754 cacttaattatgtgattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtcc 2425818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 5236024 - 5235960
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||| || | ||||||| ||||||||||  |||||||||||||||| || |||||||||||    
T  5236024 cactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtcc 5235960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 293
Target Start/End: Original strand, 9408334 - 9408404
Alignment:
Q  226 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 293  Q
    ||||||||||||||   ||| |||||||| |||||||||| ||||||||||| ||||||||  ||||||||    
T  9408334 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagt 9408404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 15902860 - 15902796
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||| |||||||||| ||||||||||| | |||||| | ||||||| || |||||||||||    
T  15902860 cactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgtgtcc 15902796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 22868080 - 22868016
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||||||||||||| ||||||||| |||||| ||||||||| || |||| ||||||    
T  22868080 cactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtcggtgttgtgtcc 22868016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 24339680 - 24339616
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||||||||| |||||||||||| ||||||| ||||||| | ||| ||||||||||    
T  24339680 cactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtcc 24339616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 306
Target Start/End: Complemental strand, 3721158 - 3721070
Alignment:
Q  220 cgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 306  Q
    |||||||||||||||||| |||   |  ||||||| |||||||||||||||||||||||   ||||||  ||||||| ||||||||||||    
T  3721158 cgtgtccgacaccgacacatataattatactaaattatgtgattttctcaaattattag-catgtcgaaatgtcagtgtccgtgtcgtgt 3721070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 299
Target Start/End: Original strand, 8046060 - 8046103
Alignment:
Q  256 tgattttctcaaattattagttgtgtcgacgtgtcagtatccgt 299  Q
    ||||||||||||||||||||| |||| | |||||||||||||||    
T  8046060 tgattttctcaaattattagtggtgttggcgtgtcagtatccgt 8046103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 1433488 - 1433430
Alignment:
Q  248 aaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 306  Q
    |||| ||||||||||||||||||||||   |||||| ||||||| | ||||||||||||    
T  1433488 aaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgt 1433430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 304
Target Start/End: Complemental strand, 10042973 - 10042915
Alignment:
Q  246 ctaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 304  Q
    |||||| |||||| ||| ||||||||||||| |||||| ||||| ||| ||||||||||    
T  10042973 ctaaattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgtgtcgt 10042915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 11831470 - 11831424
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtc 290  Q
    |||||||| || ||||||| ||||||||||||||||||||| |||||    
T  11831470 cactaaattatatgattttttcaaattattagttgtgtcgatgtgtc 11831424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 19206079 - 19206025
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    |||||||||||||||||||||||  |||||| |||||  || |||||||||||||    
T  19206079 atgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtc 19206025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 306
Target Start/End: Original strand, 21141015 - 21141065
Alignment:
Q  256 tgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 306  Q
    ||||||||| ||||||||||| ||||||||||||| |  ||||||||||||    
T  21141015 tgattttcttaaattattagtggtgtcgacgtgtcggcgtccgtgtcgtgt 21141065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 2334371 - 2334314
Alignment:
Q  174 cacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacac 231  Q
    |||| |||||||||||||||| |||||| | ||||  || ||||||||||||||||||    
T  2334371 cacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgacac 2334314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 32093959 - 32094020
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgt-tccggtgttagatatgtgtcgtgtccgacac 231  Q
    ||||||| ||||||||||||||||||||||  |||||||  || | ||||||||||||||||    
T  32093959 aagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacac 32094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 32308158 - 32308109
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 293  Q
    |||| ||| |||||||||||||||||||||||  |||||| |||||||||    
T  32308158 cactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 32308109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 281
Target Start/End: Complemental strand, 37870957 - 37870894
Alignment:
Q  221 gtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaaattattagttgtgt 281  Q
    |||||||||||||||||   | ||| ||| |||||||||||||||||||||| |||||| ||||    
T  37870957 gtgtccgacaccgacacacataattacacgaaatcatgtgattttctcaaatgattagtagtgt 37870894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 927867 - 927907
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagt 293  Q
    |||| ||||||||||||||||| | ||||||||||||||||    
T  927867 atgtcattttctcaaattattattagtgtcgacgtgtcagt 927907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 9778619 - 9778559
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacac 231  Q
    ||||||| |||||||| ||||||||||||| |||||||  || | |||| |||||||||||    
T  9778619 aagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacac 9778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 11665470 - 11665514
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatcc 297  Q
    |||||||||| |||||||||||||||||||  ||||||| |||||    
T  11665470 atgtgattttttcaaattattagttgtgtcagcgtgtcaatatcc 11665514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 17851469 - 17851405
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||||||||||| ||||||||||  || |||| ||||| |||||| ||||||||||    
T  17851469 cactgaattatgtgattttctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtcc 17851405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 35861993 - 35861957
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgt 289  Q
    |||||||||| |||||||||||||||||||| |||||    
T  35861993 atgtgattttttcaaattattagttgtgtcggcgtgt 35861957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 39138541 - 39138493
Alignment:
Q  188 ggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgaca 236  Q
    |||| |||||||| || |||||||| |||| ||||||||||||||||||    
T  39138541 ggataaggcgtgtccccgtgttagacatgtatcgtgtccgacaccgaca 39138493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 302
Target Start/End: Original strand, 36450707 - 36450833
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 275  Q
    |||||||||||||||||||||| | |||||  || | | ||||||||||||||| ||||||   ||| |||| |||  ||||||||| ||||||||||||    
T  36450707 acactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgattttttcaaattattag 36450806  T
Q  276 ttgtgtcgacgtgtcagtatccgtgtc 302  Q
    |||||||| ||||||||| ||||||||    
T  36450807 ttgtgtcggcgtgtcagtgtccgtgtc 36450833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 226 - 308
Target Start/End: Original strand, 2572056 - 2572141
Alignment:
Q  226 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||||||||   ||| |||||||| |||||||||| |||||||||||| |||||||||||||| |||||||||||||||||    
T  2572056 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtcc 2572141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 926733 - 926873
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||||||||||||| | || ||| |||||||  || | |||||| |||||||||||||||||||   | |||| ||  ||| |||||||||||    
T  926733 aagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataattacactgaacaatgagattttctcaa 926832  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||  |||| | ||||||||| ||||||||||||||    
T  926833 attattaggagtgttggcgtgtcagtgtccgtgtcgtgtcc 926873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 219 - 308
Target Start/End: Complemental strand, 20873135 - 20873043
Alignment:
Q  219 tcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||||||||||||||||   ||| |||||||| |||||||||| |||||||||||  | ||||| ||||||||| ||||||||||||||    
T  20873135 tcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtcc 20873043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 299
Target Start/End: Complemental strand, 5813706 - 5813575
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| |||||||||  ||||||||||| |||||||  || | ||||||||||||||||||||||||    || |||||||  |||||| ||| ||||    
T  5813706 aagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtatttacactaaaatatgtgactttttcaa 5813607  T
Q  268 attattagttgtgtcgacgtgtcagtatccgt 299  Q
    |||||||| ||||||| |||||| || |||||    
T  5813606 attattagctgtgtcggcgtgtccgtgtccgt 5813575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 273
Target Start/End: Complemental strand, 40332302 - 40332200
Alignment:
Q  174 cacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaatt 270  Q
    |||| ||||||||||||||||||| || |||||||  || | ||||||||||| ||||||||||||   ||| |||| ||| ||||||||||||||||||    
T  40332302 cacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgattttctcaaatt 40332203  T
Q  271 att 273  Q
    |||    
T  40332202 att 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 171 - 307
Target Start/End: Original strand, 949210 - 949348
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt--attgcactaaatcatgtgattttctcaaa 268  Q
    ||||||| ||| ||||| ||||||| ||||  ||||||  |||||||||||| |||| ||||||||| |  | |||||| ||| || ||||||| |||||    
T  949210 aagcacgaacattcctcagattaggagtgtctcggtgtcggatatgtgtcgtatccggcaccgacacattaactgcacttaattatttgattttttcaaa 949309  T
Q  269 ttattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    ||||||  ||||||||||| |||||||  ||||||||||    
T  949310 ttattaactgtgtcgacgtatcagtatttgtgtcgtgtc 949348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 172 - 274
Target Start/End: Original strand, 33405330 - 33405435
Alignment:
Q  172 agcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaaa 268  Q
    |||||| |||||| | ||||||| ||||| | ||||| ||| ||||||||||||||||||||||||   | ||| |||||||| ||||| ||||||||||    
T  33405330 agcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatgtgtttttctcaaa 33405429  T
Q  269 ttatta 274  Q
    ||||||    
T  33405430 ttatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 299
Target Start/End: Original strand, 15816129 - 15816205
Alignment:
Q  226 cgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgt 299  Q
    ||||||||||||||||   | |||||||| |||||||||| |||||||||||||||||||| ||||||||| |||||    
T  15816129 cgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 15816205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 275
Target Start/End: Complemental strand, 3025665 - 3025558
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaa 267  Q
    ||||||| |||||||||||||||| |||||  | |||| ||| | |||||||||||||||| |||||   | ||| |||| ||| |||||||||||||||    
T  3025665 aagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattttctcaa 3025566  T
Q  268 attattag 275  Q
    ||||||||    
T  3025565 attattag 3025558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 22652005 - 22651950
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||    
T  22652005 atgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 22651950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 24205756 - 24205819
Alignment:
Q  174 cacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    |||| |||||||||||||||||||||||||||||| ||| ||| || |||| ||||||||||||    
T  24205756 cacggacactcctcggattaggcgtgttccggtgtcagacatgcgttgtgttcgacaccgacac 24205819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 3677815 - 3677761
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    |||||||||| | ||||||||| ||||||||| ||||||||||||||||||||||    
T  3677815 atgtgattttttaaaattattaattgtgtcgatgtgtcagtatccgtgtcgtgtc 3677761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 308
Target Start/End: Original strand, 29510335 - 29510389
Alignment:
Q  254 tgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||    
T  29510335 tgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 29510389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 41838141 - 41838207
Alignment:
Q  241 ttgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 307  Q
    ||||||| ||| |||||||||| | |||||||||| ||||||||||||||||| ||||| |||||||    
T  41838141 ttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtc 41838207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 290
Target Start/End: Original strand, 29447140 - 29447177
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtc 290  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29447140 atgtgattttctcaaattattagttgtgtcgacgtgtc 29447177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 4673367 - 4673418
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgaca 230  Q
    |||||||| |||||||||||||||||||||  |||||| |||||||||||||    
T  4673367 acactccttggattaggcgtgttccggtgtcggatatgcgtcgtgtccgaca 4673418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 20679348 - 20679465
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattag 275  Q
    ||||||||||| | |||||||| |||||||  || | |||| | ||| |||||||||||||||   | |||| ||  |||||||||||||||||||||||    
T  20679348 acactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacacttataattacactgaactatgtgattttctcaaattattag 20679447  T
Q  276 ttgtgtcgacgtgtcagt 293  Q
      |||||||| |||||||    
T  20679448 gggtgtcgacatgtcagt 20679465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 27213576 - 27213521
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||||||| ||||||||||  |||||| |||||| |||||||||||||||||    
T  27213576 atgtgattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtcc 27213521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 29510238 - 29510305
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacact 238  Q
    ||||||| ||||||||||||||||| |||| |||||||  || | | |||||||||||||||||||||    
T  29510238 aagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacact 29510305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 31557102 - 31556986
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 275  Q
    |||| ||| ||||||||||||| | |||||  || |||||||||||| |||||||| ||||   ||| |||| ||| |||||||||| |||||||||||     
T  31557102 acacaccttggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtgatttt-tcaaattattaa 31557004  T
Q  276 ttgtgtcgacgtgtcagt 293  Q
     ||||||| |||||||||    
T  31557003 ctgtgtcggcgtgtcagt 31556986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 37283760 - 37283862
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac-ttattgcactaaatcatgtgattttctcaaat 269  Q
    |||||||  ||||||||||||||| ||||| ||||   |||| | ||||||||||| |||||||||| | ||| |||| ||| |||||||||||||| ||    
T  37283760 aagcacgggcactcctcggattagacgtgtcccgg---tagacacgtgtcgtgtcccacaccgacacataattacactgaattatgtgattttctcagat 37283856  T
Q  270 tattag 275  Q
    ||||||    
T  37283857 tattag 37283862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 3951481 - 3951547
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| | |||||| |||||||||||||||| |||| ||| | |||||||||| |||||||||||    
T  3951481 aagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacac 3951547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 4298887 - 4298971
Alignment:
Q  227 gacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||||||||   ||| || ||||| |||||||||| |||||||||||  ||||||| ||||| |||||| |||||||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtcc 4298971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 22652101 - 22652035
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| |||||||||||||||| ||||| |||||||  || |  |||||||||||||||||||||    
T  22652101 aagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacac 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 28819316 - 28819250
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    |||||| || |||||||||||||| |||||||||||||| ||||  | ||||||| |||||||||||    
T  28819316 aagcacatatactcctcggattagccgtgttccggtgttggatacatatcgtgtctgacaccgacac 28819250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 34450966 - 34451032
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| |||||||| |||| |||||||| || |||| ||| | ||||||||||||||||||||||    
T  34450966 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 290
Target Start/End: Complemental strand, 14134810 - 14134691
Alignment:
Q  174 cacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaatt 270  Q
    |||| |||||||||| ||||||||||| | ||||   || | |||||||||  ||||||||||  |||   | |||| ||| ||||||||||||||||||    
T  14134810 cacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacatatataattacactgaattatgtgattttctcaaatt 14134711  T
Q  271 attagttgtgtcgacgtgtc 290  Q
    ||||||  ||||||||||||    
T  14134710 attagtattgtcgacgtgtc 14134691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 15816063 - 15816124
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacacc 232  Q
    ||||||| ||||| |||||||||||||||| |||||||  |||  |||||||||||||||||    
T  15816063 aagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacacc 15816124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 282
Target Start/End: Original strand, 16641922 - 16642033
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtc-----cgacaccgacacttat---tgcactaaatcatgtgattttctcaaatt 270  Q
    ||||||||||||||||| |||| ||||||||||| |  |||||||||     |||||||||||| |||     |||||||| |||||  |||||||||||    
T  16641922 acactcctcggattaggtgtgtcccggtgttagacacatgtcgtgtccgacacgacaccgacacatataacgacactaaattatgtgtatttctcaaatt 16642021  T
Q  271 attagttgtgtc 282  Q
    ||||||||||||    
T  16642022 attagttgtgtc 16642033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 29447044 - 29447109
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgaca 236  Q
    ||||||| |||||||| ||||||||||||| | ||||| ||| |  ||||||||||||||||||||    
T  29447044 aagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgaca 29447109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 291
Target Start/End: Complemental strand, 27101585 - 27101506
Alignment:
Q  214 atgtgtcgtgtccgacaccgacacttat--tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtca 291  Q
    ||||||| |||||||||| ||||| |||  | |||||||| |||||||||| ||||||||||||  |||||| |||||||    
T  27101585 atgtgtcatgtccgacactgacacctataattcactaaattatgtgattttttcaaattattagcggtgtcggcgtgtca 27101506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 29655930 - 29655978
Alignment:
Q  189 gattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||||||||| |||||| |||||||||| ||||||||||| |||||    
T  29655930 gattaggcgtgtttcggtgtcagatatgtgttgtgtccgacactgacac 29655978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 126295 - 126358
Alignment:
Q  174 cacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    |||| |||||||||||||||| ||||| ||||| || || | |||||||||||||||| |||||    
T  126295 cacggacactcctcggattagccgtgtcccggtattggacacgtgtcgtgtccgacactgacac 126358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 4948718 - 4948657
Alignment:
Q  219 tcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagtt 277  Q
    |||||||||||||||||||||   ||| |||| ||| |||||||||| ||||||||||||||    
T  4948718 tcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagtt 4948657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 6065591 - 6065650
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgaca 230  Q
    ||||||| |||||||| | |||| ||||||||||||||  || |||||||||||||||||    
T  6065591 aagcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgaca 6065650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 8293932 - 8293873
Alignment:
Q  178 tacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    |||||||||||||||||| |||| | ||||| ||||||||||| |||  |||||||||||    
T  8293932 tacactcctcggattaggtgtgtccaggtgtcagatatgtgtcatgtttgacaccgacac 8293873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 13436994 - 13437049
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||||| |||||||||||| ||||||| ||||||||| ||| |||| |||||    
T  13436994 atgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtcc 13437049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 17751762 - 17751703
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtc-gtgtccgacaccgacac 237  Q
    |||||||||||||||||||||| |||||||  | |||| ||| |||||||||||||||||    
T  17751762 acactcctcggattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 17751703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 17760749 - 17760690
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtc-gtgtccgacaccgacac 237  Q
    |||||||||||||||||||||| |||||||  | |||| ||| |||||||||||||||||    
T  17760749 acactcctcggattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 17760690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 27067236 - 27067300
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||| |||||||||||||||| |||  ||||||||| || |  |||||||||||||||||||||    
T  27067236 aagcacggacactcctcggattagacgt--tccggtgttcgacacatgtcgtgtccgacaccgacac 27067300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 34897123 - 34897068
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgt 299  Q
    |||| ||| |||||||||||||||||||||||  ||||||||||||| || |||||    
T  34897123 cactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 301
Target Start/End: Original strand, 12936515 - 12936569
Alignment:
Q  247 taaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgt 301  Q
    ||||| |||||||||| |||||||||||    |||||||||||||||||||||||    
T  12936515 taaattatgtgattttatcaaattattaacaatgtcgacgtgtcagtatccgtgt 12936569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 13844591 - 13844663
Alignment:
Q  221 gtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtc 290  Q
    ||||||||||||||||| |||   | |||| ||| |||||||||||||||||||||||  |||||| ||||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtc 13844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 22197674 - 22197736
Alignment:
Q  169 taaagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacac 231  Q
    ||||||||| ||||||||| ||||||||||| ||||||||  || | ||||| ||||||||||    
T  22197674 taaagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgacac 22197736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 24196628 - 24196678
Alignment:
Q  254 tgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 304  Q
    ||||||||| |||||||||||||||||||| |||||| || ||||| ||||    
T  24196628 tgtgattttttcaaattattagttgtgtcggcgtgtcggtgtccgtatcgt 24196678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 24613585 - 24613510
Alignment:
Q  220 cgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 293  Q
    ||||||||||||||||||||   ||| |||| ||| |||||||||| |||||||||||| |||||||  ||||||||    
T  24613585 cgtgtccgacaccgacacttgtaattacacttaattatgtgatttt-tcaaattattagctgtgtcggtgtgtcagt 24613510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 305
Target Start/End: Complemental strand, 29776063 - 29776013
Alignment:
Q  255 gtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtg 305  Q
    |||||||||||||||||||||  |||||||| ||||| | |||||||||||    
T  29776063 gtgattttctcaaattattagcagtgtcgacttgtcaatgtccgtgtcgtg 29776013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 39954300 - 39954346
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtc 290  Q
    |||||||| |||||||||||||||||||||||  |||||| ||||||    
T  39954300 cactaaattatgtgattttctcaaattattagcggtgtcggcgtgtc 39954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 293
Target Start/End: Original strand, 4786329 - 4786408
Alignment:
Q  217 tgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 293  Q
    |||||| |||||||||||||| |||   | |||| ||| |||||||||||| ||||||||| | |||||| |||||||||    
T  4786329 tgtcgtatccgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagt 4786408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 308
Target Start/End: Complemental strand, 8343381 - 8343290
Alignment:
Q  220 cgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||| |||||| |||||||   ||| |||||||| |||||||||| |||||||||||| | |||||  ||||| || || |||||||||||    
T  8343381 cgtgtacgacactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggtgtcagtgtcgtgtcc 8343290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 283
Target Start/End: Complemental strand, 18407833 - 18407718
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| |||||||||  ||||||||||| |  ||||  || |||||||||||||| || ||||||||   ||| |||| ||| |||||||||| |  |    
T  18407833 aagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatgtgatttttttga 18407734  T
Q  268 attattagttgtgtcg 283  Q
    |||||||| |||||||    
T  18407733 attattagctgtgtcg 18407718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 302
Target Start/End: Original strand, 31236607 - 31236656
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    |||||||||||||||||||||||  |||||| |||||| |||||| ||||    
T  31236607 atgtgattttctcaaattattagcagtgtcggcgtgtccgtatccttgtc 31236656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 36934699 - 36934646
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 306  Q
    |||||||||| || |||||||||  |||||||||||| ||| ||||||||||||    
T  36934699 atgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgt 36934646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 4673458 - 4673510
Alignment:
Q  256 tgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||| |||||||||||  ||||||| ||||||||| || |||||||||||    
T  4673458 tgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtcc 4673510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 305
Target Start/End: Original strand, 18170512 - 18170564
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtg 305  Q
    |||| ||||| ||||||| ||| |||||||| ||||||||| |||||||||||    
T  18170512 atgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtg 18170564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 305
Target Start/End: Original strand, 18634080 - 18634132
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtg 305  Q
    |||| ||||| ||||||| ||| |||||||| ||||||||| |||||||||||    
T  18634080 atgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtg 18634132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 22197763 - 22197827
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||| |||||| ||| |||||||||||| ||||| | ||||| ||| || |||||||||||    
T  22197763 cactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtcc 22197827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 25192388 - 25192432
Alignment:
Q  264 tcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||||||| ||||||| ||||||||| ||||| ||||||||    
T  25192388 tcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtcc 25192432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 274
Target Start/End: Original strand, 31580080 - 31580178
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaaattatta 274  Q
    |||| |||||||||||| ||||| ||||||   | |||||||| |||||||| ||||||   | ||| |||| ||| |||||||||||| |||||||||    
T  31580080 acacccctcggattaggtgtgtttcggtgtcgaacatgtgtcgcgtccgacatcgacacctataattacactcaattatgtgattttcttaaattatta 31580178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 171 - 306
Target Start/End: Original strand, 407 - 545
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| ||||||||||||||||| |||| |||||||  || | | ||||||||||||||||||||||   ||| |||| |||  ||||||||| ||||    
T  407 aagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgattttttcaa 506  T
Q  268 attattagttgtgtcgacgtgtcagtatccgtgtcgtgt 306  Q
    ||||||||  |||||| ||| ||||| |||||| |||||    
T  507 attattagcagtgtcggcgtatcagtgtccgtggcgtgt 545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 13520 - 13380
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---------ttattgcactaaatcatgtgattt 261  Q
    ||||||| |||||||| |||||||| |||| |  |||| |||   ||||||||||||||||||||||         | |||||||| ||| |||||||||    
T  13520 aagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtgattt 13421  T
Q  262 tctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    |||||||||||||||||||||| ||||||||| ||||||||    
T  13420 tctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 13380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 21807 - 21947
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---------ttattgcactaaatcatgtgattt 261  Q
    ||||||| |||||||| |||||||| |||| |  |||| |||   ||||||||||||||||||||||         | |||||||| ||| |||||||||    
T  21807 aagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtgattt 21906  T
Q  262 tctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    |||||||||||||||||||||| ||||||||| ||||||||    
T  21907 tctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 21947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 171 - 290
Target Start/End: Complemental strand, 14641 - 14522
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttattgcactaaatcatgtgattttctcaaatt 270  Q
    ||||||||||||||||  ||||||||||||  ||||||  || | |||||||||||||||||     | ||| |||| ||| |||||||||| |||||||    
T  14641 aagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccacttgtaattacactgaattatgtgattttttcaaatt 14542  T
Q  271 attagttgtgtcgacgtgtc 290  Q
    ||||||||||||| ||||||    
T  14541 attagttgtgtcggcgtgtc 14522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 290
Target Start/End: Complemental strand, 70392 - 70270
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 267  Q
    ||||||| |||||| ||||||||||| ||| | |||||  || | ||||||||||||||||||||||||   ||| |||| ||| |||| ||||| ||||    
T  70392 aagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttcaa 70293  T
Q  268 attattagttgtgtcgacgtgtc 290  Q
    |||||||  ||||||||| ||||    
T  70292 attattaactgtgtcgacatgtc 70270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 178852 - 178904
Alignment:
Q  256 tgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||||||||||||    
T  178852 tgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtcc 178904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 308
Target Start/End: Complemental strand, 241719 - 241568
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac--------------ttattgcactaaatcatgt 256  Q
    ||||||| ||||| |||||||||||||||| |||||||  || | ||||||||||||||||| ||||              | ||| |||||||| ||||    
T  241719 aagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaattatgt 241620  T
Q  257 gattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||  ||||||||||| ||||||| ||||||||| ||||||||||||||    
T  241619 gatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 241568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 299
Target Start/End: Original strand, 6992 - 7108
Alignment:
Q  186 tcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtc 282  Q
    ||||||||||||| | ||| | | ||||| |||| |||||||||||| ||||||   |||  ||||||| |||| ||||| |||||||||||| ||||||    
T  6992 tcggattaggcgtatcccgatatcagatacgtgttgtgtccgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtc 7091  T
Q  283 gacgtgtcagtatccgt 299  Q
    ||||| ||||| |||||    
T  7092 gacgtatcagtgtccgt 7108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 8077 - 7996
Alignment:
Q  217 tgtcgtgtccgacaccgacactt--attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatc 296  Q
    |||||||||||||||||||||||  ||| ||||  || || ||||||| |||||||||||||||||||| |||||| |||||    
T  8077 tgtcgtgtccgacaccgacactttaattacactgtattatatgattttttcaaattattagttgtgtcggcgtgtctgtatc 7996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 8695 - 8640
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||||||||||  ||||||||||  |||||||||||||||| ||| ||||||||||    
T  8695 atgtgattttcctaaattattagaagtgtcgacgtgtcagtgtccatgtcgtgtcc 8640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 92936 - 92875
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacacc 232  Q
    ||||||| |||||||||||||||||||||| | |||||  || |||||||||||||||||||    
T  92936 aagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacc 92875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 20210 - 20146
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||||||||| |||||||||||| ||||||| ||||||| | ||||||||||||||    
T  20210 cactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtcc 20146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 308
Target Start/End: Original strand, 45475 - 45616
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgt-gattttctca 266  Q
    ||||||||||| || | ||||||||| |||  |||||| ||| | ||||||||||||||||||||||||   ||| |||| ||| ||||   |||| | |    
T  45475 aagcacgtacaatctttggattaggcatgtcgcggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtattttttttta 45574  T
Q  267 aattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
     || |||| |||||||||||||||||| ||||||| ||||||    
T  45575 gataattaattgtgtcgacgtgtcagtgtccgtgttgtgtcc 45616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 225298 - 225353
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| |||||||||||||||||  ||||||| ||||||||| ||||||||||||||    
T  225298 atgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 225353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 302
Target Start/End: Complemental strand, 51849 - 51791
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 302  Q
    |||| ||| |||||||||| |||||||||||| ||||||| ||||||||| ||||||||    
T  51849 cactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 51791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 291
Target Start/End: Complemental strand, 26422 - 26384
Alignment:
Q  253 atgtgattttctcaaattattagttgtgtcgacgtgtca 291  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  26422 atgtgattttctcaaattattagtggtgtcgacgtgtca 26384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 3052 - 2987
Alignment:
Q  172 agcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    |||||| ||||||||||||||||||||||||||||||   | | |||||||||| || ||||||||    
T  3052 agcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacac 2987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 19613 - 19550
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||||||||| |||||||||||||||| ||| ||||||||| || |||||||||||    
T  19613 cactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtcc 19550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 46720 - 46656
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    |||| ||| |||||||||| |||||||||||  ||||||| ||||||| | ||||||||||||||    
T  46720 cactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtcc 46656  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 17750 - 17808
Alignment:
Q  227 gacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtc 282  Q
    |||||||||||||   ||| |||||||| |||||||||| |||||||||||||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtc 17808  T

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Target: scaffold0475 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 3340 - 3290
Alignment:
Q  258 attttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 308  Q
    ||||||| ||||| ||||   ||||||||||||||||||||||||||||||    
T  3340 attttctaaaattgttagcattgtcgacgtgtcagtatccgtgtcgtgtcc 3290  T

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Target: scaffold0227 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 7332 - 7378
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtc 290  Q
    |||||||| ||||||||||  ||||||||||||||||||| ||||||    
T  7332 cactaaattatgtgatttttccaaattattagttgtgtcggcgtgtc 7378  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 3791 - 3849
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    ||||||||||||||||||||||  || |||  || ||||||||||||||||||| ||||    
T  3791 acactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacac 3849  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 71842 - 71784
Alignment:
Q  179 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 237  Q
    |||||||||||||||| ||||| |||||||  || | |||| |||||||||||||||||    
T  71842 acactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 71784  T

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Target: scaffold0793 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 4826 - 4879
Alignment:
Q  171 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgt 224  Q
    ||||||| |||||||||||||||||||||| || ||||  || |||||||||||    
T  4826 aagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 4879  T

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Target: scaffold0697 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 1715 - 1652
Alignment:
Q  214 atgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattatta 274  Q
    ||||||||||||||||||||||||||||   |  || |||| || |||||||||||||||||||    
T  1715 atgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattatta 1652  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 63837 - 63750
Alignment:
Q  221 gtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtg-tcgacgtgtcagtatccgtgtcgt 304  Q
    ||||| |||||||||||||   |||||||| ||| |||| ||||||||||||||||||  ||| | ||||||||| | ||||||||||    
T  63837 gtgtctgacaccgacacttgtaattgcactgaattatgtaattttctcaaattattagcggtgttagacgtgtcattgtccgtgtcgt 63750  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 263393 - 263453
Alignment:
Q  244 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 304  Q
    |||| ||| ||||| |||||||||||||||||  |||| ||| ||||||| ||||||||||    
T  263393 cactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgt 263453  T

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