View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2258_1D_low_16 (Length: 318)

Name: NF2258_1D_low_16
Description: NF2258_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2258_1D_low_16
NF2258_1D_low_16
[»] chr4 (50 HSPs)
chr4 (23-308)||(16054457-16054742)
chr4 (162-244)||(20799378-20799460)
chr4 (162-211)||(13121539-13121588)
chr4 (165-211)||(21317355-21317401)
chr4 (165-211)||(43155077-43155123)
chr4 (157-211)||(50362156-50362210)
chr4 (162-211)||(6087742-6087791)
chr4 (162-210)||(7967643-7967691)
chr4 (164-224)||(12850977-12851037)
chr4 (163-211)||(49041998-49042046)
chr4 (167-211)||(50442764-50442808)
chr4 (164-244)||(54500566-54500646)
chr4 (160-211)||(45970724-45970775)
chr4 (162-244)||(9946422-9946504)
chr4 (162-216)||(30051879-30051933)
chr4 (157-207)||(32006490-32006540)
chr4 (172-210)||(36489406-36489444)
chr4 (173-207)||(48643282-48643316)
chr4 (159-209)||(55853133-55853183)
chr4 (158-207)||(921506-921555)
chr4 (162-211)||(2186350-2186399)
chr4 (162-211)||(7230275-7230324)
chr4 (162-211)||(8494982-8495031)
chr4 (162-211)||(10261786-10261834)
chr4 (162-211)||(11286798-11286847)
chr4 (162-211)||(12322668-12322717)
chr4 (162-211)||(16733536-16733585)
chr4 (162-211)||(16740394-16740443)
chr4 (162-211)||(16743301-16743350)
chr4 (162-211)||(20096287-20096336)
chr4 (162-211)||(21562621-21562669)
chr4 (162-211)||(23304033-23304082)
chr4 (162-211)||(24079857-24079905)
chr4 (162-211)||(24665008-24665057)
chr4 (162-211)||(26926727-26926775)
chr4 (164-209)||(29523551-29523596)
chr4 (162-211)||(36203231-36203280)
chr4 (166-211)||(38374956-38375001)
chr4 (162-211)||(43330142-43330190)
chr4 (162-211)||(51450208-51450256)
chr4 (162-211)||(52270047-52270096)
chr4 (162-211)||(55061032-55061081)
chr4 (160-209)||(55238524-55238573)
chr4 (162-206)||(14136086-14136130)
chr4 (162-210)||(15849229-15849277)
chr4 (161-209)||(25235822-25235870)
chr4 (162-210)||(32180825-32180873)
chr4 (167-211)||(38416057-38416101)
chr4 (167-211)||(43027292-43027336)
chr4 (162-210)||(53142601-53142649)
[»] chr2 (45 HSPs)
chr2 (160-224)||(41939112-41939176)
chr2 (162-211)||(7206120-7206169)
chr2 (160-244)||(10195646-10195730)
chr2 (160-211)||(22608520-22608571)
chr2 (162-211)||(2783002-2783051)
chr2 (162-211)||(27244652-27244701)
chr2 (168-244)||(5168563-5168639)
chr2 (164-244)||(20990888-20990968)
chr2 (162-237)||(3197071-3197145)
chr2 (164-211)||(20565092-20565139)
chr2 (162-244)||(10735815-10735897)
chr2 (167-209)||(24520658-24520700)
chr2 (166-244)||(24593375-24593453)
chr2 (161-211)||(28195157-28195207)
chr2 (162-216)||(30243245-30243299)
chr2 (158-244)||(31815871-31815957)
chr2 (162-211)||(3708689-3708737)
chr2 (162-211)||(9383226-9383275)
chr2 (162-211)||(9842219-9842268)
chr2 (162-211)||(11868679-11868727)
chr2 (162-211)||(11931600-11931649)
chr2 (158-211)||(17778621-17778673)
chr2 (166-211)||(24393244-24393289)
chr2 (162-211)||(24592863-24592912)
chr2 (162-211)||(26999105-26999154)
chr2 (162-211)||(27152348-27152397)
chr2 (162-211)||(31543007-31543056)
chr2 (162-211)||(33063981-33064030)
chr2 (162-211)||(35360072-35360120)
chr2 (160-209)||(35798051-35798100)
chr2 (162-211)||(35820318-35820367)
chr2 (159-244)||(43067658-43067743)
chr2 (162-211)||(45032688-45032737)
chr2 (159-207)||(10332296-10332344)
chr2 (167-207)||(13000685-13000725)
chr2 (161-209)||(15764927-15764975)
chr2 (162-210)||(22571883-22571931)
chr2 (157-209)||(22653669-22653721)
chr2 (162-210)||(24033732-24033780)
chr2 (163-207)||(27412857-27412901)
chr2 (162-210)||(28277694-28277742)
chr2 (166-246)||(37320499-37320579)
chr2 (160-244)||(38904054-38904138)
chr2 (162-210)||(41187475-41187523)
chr2 (161-209)||(44857259-44857307)
[»] chr1 (34 HSPs)
chr1 (162-246)||(27533238-27533322)
chr1 (162-210)||(3935802-3935850)
chr1 (162-229)||(11014227-11014294)
chr1 (162-244)||(17139501-17139583)
chr1 (162-207)||(7925359-7925404)
chr1 (162-211)||(13054868-13054917)
chr1 (162-211)||(21400040-21400089)
chr1 (162-207)||(36371061-36371106)
chr1 (162-211)||(41763172-41763221)
chr1 (162-211)||(52441528-52441577)
chr1 (165-216)||(16967206-16967257)
chr1 (164-203)||(44068853-44068892)
chr1 (160-211)||(44220980-44221031)
chr1 (162-244)||(1091174-1091256)
chr1 (162-244)||(5503749-5503831)
chr1 (165-211)||(13794525-13794571)
chr1 (165-211)||(14880826-14880872)
chr1 (162-216)||(28979288-28979342)
chr1 (160-209)||(2352590-2352639)
chr1 (165-210)||(5270758-5270803)
chr1 (162-207)||(15729425-15729470)
chr1 (162-211)||(29506822-29506871)
chr1 (162-211)||(34632164-34632213)
chr1 (167-216)||(34808575-34808624)
chr1 (162-211)||(37098498-37098547)
chr1 (162-211)||(42045389-42045438)
chr1 (160-208)||(2754356-2754404)
chr1 (162-206)||(7484716-7484760)
chr1 (162-210)||(18166597-18166645)
chr1 (162-210)||(32944731-32944779)
chr1 (164-212)||(34733397-34733445)
chr1 (161-209)||(37662582-37662630)
chr1 (157-209)||(46965733-46965785)
chr1 (175-211)||(51241498-51241534)
[»] chr8 (31 HSPs)
chr8 (162-211)||(37015853-37015902)
chr8 (168-216)||(36018542-36018590)
chr8 (160-209)||(10200706-10200755)
chr8 (162-211)||(11708981-11709030)
chr8 (162-211)||(13286126-13286175)
chr8 (162-211)||(23816785-23816834)
chr8 (159-216)||(28084274-28084331)
chr8 (162-211)||(33451366-33451415)
chr8 (162-211)||(39821879-39821928)
chr8 (159-211)||(17704005-17704057)
chr8 (162-210)||(32223897-32223945)
chr8 (157-216)||(8717487-8717546)
chr8 (162-209)||(18942913-18942960)
chr8 (162-244)||(22775623-22775705)
chr8 (162-210)||(8999909-8999958)
chr8 (162-211)||(11621170-11621219)
chr8 (162-211)||(11771702-11771751)
chr8 (159-216)||(18959141-18959198)
chr8 (162-211)||(20665380-20665428)
chr8 (162-211)||(27718911-27718960)
chr8 (162-211)||(30550743-30550791)
chr8 (162-211)||(37999437-37999486)
chr8 (162-211)||(44215492-44215540)
chr8 (162-207)||(44293570-44293615)
chr8 (159-211)||(10152448-10152500)
chr8 (162-198)||(11236949-11236985)
chr8 (160-216)||(12714382-12714438)
chr8 (161-209)||(20540131-20540179)
chr8 (167-211)||(28219863-28219907)
chr8 (162-210)||(37938490-37938538)
chr8 (164-211)||(44654991-44655039)
[»] chr6 (25 HSPs)
chr6 (162-211)||(12412272-12412321)
chr6 (159-210)||(12028-12079)
chr6 (162-224)||(331890-331952)
chr6 (163-244)||(14552333-14552414)
chr6 (180-244)||(27080682-27080746)
chr6 (164-211)||(10780124-10780171)
chr6 (161-211)||(3640511-3640561)
chr6 (162-216)||(32053783-32053837)
chr6 (162-211)||(247655-247703)
chr6 (166-211)||(4450261-4450306)
chr6 (162-211)||(7081671-7081720)
chr6 (162-211)||(8810635-8810684)
chr6 (162-211)||(9392685-9392734)
chr6 (167-224)||(14945517-14945574)
chr6 (166-211)||(16403975-16404020)
chr6 (162-211)||(17151231-17151280)
chr6 (162-211)||(18256878-18256927)
chr6 (162-211)||(20744133-20744182)
chr6 (162-207)||(30370171-30370216)
chr6 (162-211)||(33976240-33976288)
chr6 (167-207)||(2617226-2617266)
chr6 (161-209)||(4661093-4661141)
chr6 (161-209)||(15046935-15046983)
chr6 (155-211)||(17382072-17382128)
chr6 (162-210)||(23903325-23903372)
[»] chr7 (38 HSPs)
chr7 (160-211)||(41527553-41527604)
chr7 (162-237)||(36803833-36803912)
chr7 (162-243)||(3584199-3584280)
chr7 (162-211)||(4047781-4047829)
chr7 (162-211)||(8683065-8683114)
chr7 (157-210)||(26816682-26816735)
chr7 (166-210)||(5833041-5833085)
chr7 (160-211)||(768123-768174)
chr7 (164-211)||(11780410-11780457)
chr7 (165-244)||(21554918-21554997)
chr7 (162-237)||(22267576-22267651)
chr7 (164-211)||(40954157-40954204)
chr7 (162-244)||(7388023-7388105)
chr7 (164-222)||(8879753-8879811)
chr7 (167-209)||(13730122-13730164)
chr7 (165-211)||(30650815-30650861)
chr7 (165-211)||(42435415-42435461)
chr7 (162-211)||(1076979-1077028)
chr7 (162-211)||(10244722-10244771)
chr7 (162-211)||(19036119-19036167)
chr7 (162-211)||(20718469-20718517)
chr7 (162-211)||(20763150-20763198)
chr7 (162-211)||(22690053-22690102)
chr7 (162-211)||(29488716-29488764)
chr7 (162-211)||(30857243-30857292)
chr7 (162-211)||(33232414-33232462)
chr7 (162-211)||(34284556-34284604)
chr7 (162-211)||(39801701-39801750)
chr7 (160-216)||(3953434-3953490)
chr7 (162-210)||(5584642-5584690)
chr7 (162-210)||(5589602-5589650)
chr7 (173-213)||(7838497-7838537)
chr7 (161-209)||(12772112-12772160)
chr7 (155-210)||(17816508-17816564)
chr7 (155-210)||(19050437-19050493)
chr7 (163-211)||(25246767-25246815)
chr7 (162-210)||(35142167-35142215)
chr7 (162-238)||(37930039-37930115)
[»] chr5 (33 HSPs)
chr5 (161-244)||(16701565-16701648)
chr5 (162-244)||(19248474-19248556)
chr5 (162-216)||(20175822-20175876)
chr5 (162-216)||(24485694-24485748)
chr5 (166-216)||(27679497-27679547)
chr5 (162-244)||(32200431-32200513)
chr5 (162-211)||(6489002-6489051)
chr5 (162-211)||(15889406-15889455)
chr5 (162-211)||(18538603-18538652)
chr5 (162-211)||(20370147-20370196)
chr5 (162-211)||(34436846-34436895)
chr5 (162-210)||(5485181-5485229)
chr5 (166-210)||(6898020-6898064)
chr5 (160-211)||(11017169-11017220)
chr5 (160-211)||(36739600-36739651)
chr5 (165-216)||(37614439-37614490)
chr5 (162-244)||(1808577-1808659)
chr5 (159-209)||(39919118-39919168)
chr5 (162-211)||(9893688-9893737)
chr5 (162-211)||(17210726-17210775)
chr5 (162-211)||(20211275-20211324)
chr5 (162-207)||(32565519-32565564)
chr5 (162-211)||(36321511-36321560)
chr5 (162-211)||(37462107-37462155)
chr5 (162-211)||(37932325-37932374)
chr5 (163-244)||(39980504-39980585)
chr5 (162-211)||(43358255-43358304)
chr5 (167-211)||(1745979-1746023)
chr5 (161-209)||(2328589-2328637)
chr5 (166-210)||(2642781-2642825)
chr5 (162-210)||(17861974-17862022)
chr5 (168-244)||(19068424-19068499)
chr5 (162-210)||(27721693-27721741)
[»] chr3 (32 HSPs)
chr3 (162-244)||(24120404-24120487)
chr3 (162-216)||(21331429-21331483)
chr3 (162-244)||(29631181-29631263)
chr3 (162-216)||(33223863-33223917)
chr3 (160-210)||(37921016-37921066)
chr3 (162-211)||(18870742-18870791)
chr3 (162-211)||(38387967-38388016)
chr3 (162-211)||(48315041-48315090)
chr3 (162-207)||(48376830-48376875)
chr3 (161-209)||(2368933-2368981)
chr3 (160-211)||(8139708-8139759)
chr3 (162-244)||(7738664-7738746)
chr3 (165-211)||(7974529-7974575)
chr3 (162-244)||(16792958-16793040)
chr3 (157-211)||(16980371-16980425)
chr3 (157-211)||(20370298-20370352)
chr3 (159-209)||(30779592-30779642)
chr3 (161-207)||(34334070-34334116)
chr3 (162-211)||(43316617-43316667)
chr3 (162-244)||(48924303-48924385)
chr3 (162-211)||(376641-376690)
chr3 (162-211)||(916435-916483)
chr3 (162-211)||(1149086-1149135)
chr3 (162-211)||(10498712-10498761)
chr3 (162-211)||(31138412-31138461)
chr3 (161-206)||(44685196-44685241)
chr3 (165-210)||(52453275-52453320)
chr3 (155-210)||(5239782-5239838)
chr3 (171-211)||(38309600-38309640)
chr3 (156-216)||(43777068-43777128)
chr3 (160-216)||(49097265-49097321)
chr3 (161-209)||(50536857-50536905)
[»] scaffold0043 (1 HSPs)
scaffold0043 (162-223)||(90471-90532)
[»] scaffold0004 (1 HSPs)
scaffold0004 (166-211)||(91579-91624)
[»] scaffold0896 (1 HSPs)
scaffold0896 (162-211)||(3136-3185)


Alignment Details
Target: chr4 (Bit Score: 274; Significance: 1e-153; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 23 - 308
Target Start/End: Complemental strand, 16054742 - 16054457
Alignment:
Q  23 agtttcttatctttctgtcactctcttcgcgttttgttatcgaaaattgatgttcggactatagaaaagtttagaagaattgggtcggtcggggcaagcc 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16054742 agtttcttatctttctgtcactctcttcgcgttttgttatcgaaaattgatgttcggactatagaaaagtttagaagaattgggtcggtcagggcaagcc 16054643  T
Q  123 tcaaggctcagagggtgttgatagagctacttagatatatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16054642 tcaaggctcagagggtgttgatagagctacttagatatatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattc 16054543  T
Q  223 aagccctgatcaccaccaaaaagaggtacttacatattactcagtgactaggtcttaacgtgggcctttgtgtggtatgagtcaac 308  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16054542 aagccctgaccaccaccaaaaagaggtacttacatattactcggtgactaggtcttaacgtgggcctttgtgtggtatgagtcaac 16054457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 20799460 - 20799378
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    ||||||||||||||||| ||||| ||| || ||||||||||||||||||| | || | ||||| ||||| |||||||||||||    
T  20799460 tcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccctggtcaccaccaaaaa 20799378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 13121539 - 13121588
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  13121539 tcctcgtgagcttagcttagttggtagggacaatgcataatatatgcaag 13121588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 21317401 - 21317355
Alignment:
Q  165 tcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||||| ||||| |||||| |||||||||||||||||||    
T  21317401 tcgtgagcttagctcagttggtagagacaatgcataatatatgcaag 21317355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 43155077 - 43155123
Alignment:
Q  165 tcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||||| ||||||||  ||||||||||||||||||||||    
T  43155077 tcgtgagcttagctcagttgttatggataatgcataatatatgcaag 43155123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 50362210 - 50362156
Alignment:
Q  157 atatatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||| ||||||||||||||||| ||||| ||| || |||||||||||||||||||    
T  50362210 atatgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 50362156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 6087742 - 6087791
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||| |||||||||||| ||||| || |||||||||||||||||||||||    
T  6087742 tccttgtgagcttagctcagttggtatagataatgcataatatatgcaag 6087791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 7967691 - 7967643
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    |||||||||||||| |||||||  || ||||||||||||||||||||||    
T  7967691 tcctcgtgagcttaacttagttcgtaaagataatgcataatatatgcaa 7967643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 12851037 - 12850977
Alignment:
Q  164 ctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaa 224  Q
    ||||||||| ||||||||||||||| ||||||||||||  |||||||| |||  |||||||    
T  12851037 ctcgtgagcatagcttagttgttagggataatgcataaactatgcaaggttcaggattcaa 12850977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 49042046 - 49041998
Alignment:
Q  163 cctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||| |||||| || ||| |||||||||||||||||||    
T  49042046 cctcgtgagcttagcctagttgatatagacaatgcataatatatgcaag 49041998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 50442808 - 50442764
Alignment:
Q  167 gtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||| ||||| ||| ||||||||||||||||||||||    
T  50442808 gtgagcttagctcagttggtagggataatgcataatatatgcaag 50442764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 244
Target Start/End: Original strand, 54500566 - 54500646
Alignment:
Q  164 ctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    ||||||||||||||| ||||| |||||| ||||||||||||||| ||| | || | ||||| | |||| |||||| |||||    
T  54500566 ctcgtgagcttagctcagttggtagagacaatgcataatatatgtaaggtccggggttcaaacactgaccaccacaaaaaa 54500646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 45970775 - 45970724
Alignment:
Q  160 tatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||||||| || ||||| |||| | |||||||||||||||||||    
T  45970775 tatcctcgtgagcttaactcagttggtagaaacaatgcataatatatgcaag 45970724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 9946422 - 9946504
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    ||||||||||||||||| ||||| ||  || ||||||||| ||||||||| | || | ||||| ||| || ||||||||||||    
T  9946422 tcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccgaccaccaccaaaaa 9946504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 30051933 - 30051879
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcg 216  Q
    ||||||||||||||| | ||||||||  || ||||||||||||||||||| ||||    
T  30051933 tcctcgtgagcttagttcagttgttatggacaatgcataatatatgcaaggttcg 30051879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 32006490 - 32006540
Alignment:
Q  157 atatatcctcgtgagcttagcttagttgttagagataatgcataatatatg 207  Q
    |||| |||||||||| |||||| ||||| ||| ||||||||||||||||||    
T  32006490 atatttcctcgtgagtttagctcagttggtagggataatgcataatatatg 32006540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 36489444 - 36489406
Alignment:
Q  172 cttagcttagttgttagagataatgcataatatatgcaa 210  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  36489444 cttagcttagttgttagggacaatgcataatatatgcaa 36489406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 48643316 - 48643282
Alignment:
Q  173 ttagcttagttgttagagataatgcataatatatg 207  Q
    |||||||||||| ||||||||||||||||||||||    
T  48643316 ttagcttagttggtagagataatgcataatatatg 48643282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 55853183 - 55853133
Alignment:
Q  159 atatcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    |||||| ||||||||||||| ||||| |||||||| |||||| ||||||||    
T  55853183 atatccccgtgagcttagctcagttggtagagatattgcatattatatgca 55853133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 921555 - 921506
Alignment:
Q  158 tatatcctcgtgagcttagcttagttgttagagataatgcataatatatg 207  Q
    ||||||| || |||||||||| ||||| ||||||||||||||| ||||||    
T  921555 tatatccccgcgagcttagctcagttgatagagataatgcatattatatg 921506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 2186399 - 2186350
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  || |||||||||||||||||||    
T  2186399 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 2186350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 7230275 - 7230324
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  || |||||||||||||||||||    
T  7230275 tcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaag 7230324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 8494982 - 8495031
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||| ||||||| ||||| ||| || |||||||||||||||||||    
T  8494982 tcctcgtgaacttagctcagttggtagggacaatgcataatatatgcaag 8495031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 10261834 - 10261786
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  10261834 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 10261786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 11286847 - 11286798
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||| ||||||||| | ||||| |||||| |||||||||||||||||||    
T  11286847 tcctcctgagcttagttcagttggtagagacaatgcataatatatgcaag 11286798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 12322668 - 12322717
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  || |||||||||||||||||||    
T  12322668 tcctcgtgagcttagctcagttggtacggacaatgcataatatatgcaag 12322717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 16733585 - 16733536
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||||| || ||||| || |||||||| ||||||||||||||    
T  16733585 tcctcgtgagcttaactcagttgataaagataatgtataatatatgcaag 16733536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 16740394 - 16740443
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||| ||||||||||||| | |||| ||||||||| |||||||||    
T  16740394 tcctcgtgaacttagcttagttggttgagacaatgcataaaatatgcaag 16740443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 16743350 - 16743301
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||| |||||||||||| ||||| ||  ||||||||||||||||||||||    
T  16743350 tccttgtgagcttagctcagttgatatggataatgcataatatatgcaag 16743301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 20096336 - 20096287
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||| ||| || ||||| ||| ||||||||||||||||||||||    
T  20096336 tcctcgtgagtttaactcagttggtagggataatgcataatatatgcaag 20096287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 21562621 - 21562669
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  21562621 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 21562669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 23304082 - 23304033
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||| || || ||||||||||||||||    
T  23304082 tcctcgtgagcttagctcagttggtagggacaaggcataatatatgcaag 23304033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 24079905 - 24079857
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  24079905 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 24079857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 24665057 - 24665008
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  || |||||||||||||||||||    
T  24665057 tcctcgtgagcttagctcagttggtatggagaatgcataatatatgcaag 24665008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 26926775 - 26926727
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  26926775 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 26926727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 29523596 - 29523551
Alignment:
Q  164 ctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    ||||||||||||||||| ||| || | |||||||||||||||||||    
T  29523596 ctcgtgagcttagcttaattggtataaataatgcataatatatgca 29523551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 36203231 - 36203280
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  || |||||||||||||||||||    
T  36203231 tcctcgtgagcttagctcagttgataaggacaatgcataatatatgcaag 36203280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 38374956 - 38375001
Alignment:
Q  166 cgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||| |||||||| ||| || |||||||||||||||||||    
T  38374956 cgtgagcttaacttagttggtagggacaatgcataatatatgcaag 38375001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 43330142 - 43330190
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  43330142 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 43330190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 51450208 - 51450256
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  51450208 tcctcgtgagcttagcttagttggtag-gacaatgcataagatatgcaag 51450256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 52270096 - 52270047
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  || |||||||||||||||||||    
T  52270096 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 52270047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 55061032 - 55061081
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||| |||||||||||||| ||  || |||||||||||||||||||    
T  55061032 tcctcgtgtgcttagcttagttggtacggacaatgcataatatatgcaag 55061081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 55238573 - 55238524
Alignment:
Q  160 tatcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    ||||| ||||||||||||||||||| ||| |||| |||||| ||||||||    
T  55238573 tatccccgtgagcttagcttagttggtagggatattgcatattatatgca 55238524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 14136086 - 14136130
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatat 206  Q
    ||||||||||||||||| ||||| || ||| ||||||||||||||    
T  14136086 tcctcgtgagcttagctcagttgataaagacaatgcataatatat 14136130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 15849229 - 15849277
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    ||||||||||||||||| ||||| ||  |||||||||||| ||||||||    
T  15849229 tcctcgtgagcttagctcagttggtatggataatgcataaaatatgcaa 15849277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 25235870 - 25235822
Alignment:
Q  161 atcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    |||| ||||||||||||||||||| ||| |||| |||||| ||||||||    
T  25235870 atccccgtgagcttagcttagttggtagggatattgcatattatatgca 25235822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 32180825 - 32180873
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    ||||||||||||||||| ||||| || ||| ||||||||| ||||||||    
T  32180825 tcctcgtgagcttagctcagttggtatagacaatgcataaaatatgcaa 32180873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 38416057 - 38416101
Alignment:
Q  167 gtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||| ||||| ||  ||||||||||||||||||||||    
T  38416057 gtgagcttagctcagttggtaaggataatgcataatatatgcaag 38416101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 43027292 - 43027336
Alignment:
Q  167 gtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||| | ||| ||| ||||||||||||||||||||||    
T  43027292 gtgagcttagctcaattggtagtgataatgcataatatatgcaag 43027336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 53142601 - 53142649
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    ||||| ||||||||| | ||||| || ||||||||||||||||||||||    
T  53142601 tcctcatgagcttagttcagttgctatagataatgcataatatatgcaa 53142649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 41939176 - 41939112
Alignment:
Q  160 tatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaa 224  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||| ||| || | |||||||    
T  41939176 tatcctcgtgagcttagcttagttggtagggataatgcataatatatgtaaggtttgagattcaa 41939112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 7206120 - 7206169
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||||||||    
T  7206120 tcctcgtgagcttagctcagttggtagagacaatgcataatatatgcaag 7206169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 10195730 - 10195646
Alignment:
Q  160 tatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    ||||||||||||||||||| ||||| ||  |||||||||||||||||||||| |  |   ||||| ||||||||||||| |||||    
T  10195730 tatcctcgtgagcttagctcagttgatatggataatgcataatatatgcaagatctggagttcaaaccctgatcaccacaaaaaa 10195646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 22608520 - 22608571
Alignment:
Q  160 tatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||| |||||||||||||| ||||| |||||| |||||||||||||||||||    
T  22608520 tatcatcgtgagcttagctcagttggtagagacaatgcataatatatgcaag 22608571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 2783002 - 2783051
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||| | ||||| ||||||||||| ||||||||||||||    
T  2783002 tcctcgtgagcttagttcagttggtagagataatgtataatatatgcaag 2783051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 27244652 - 27244701
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||| || |||||||||||||||||||    
T  27244652 tcctcgtgagcttagctcagttgatagggacaatgcataatatatgcaag 27244701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 244
Target Start/End: Complemental strand, 5168639 - 5168563
Alignment:
Q  168 tgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    |||||||| || ||||| ||| |||||||||||||||||||||| |||| | ||||| ||| ||  |||||||||||    
T  5168639 tgagcttaactcagttgatagggataatgcataatatatgcaaggttcggggttcaaaccccgactaccaccaaaaa 5168563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 244
Target Start/End: Complemental strand, 20990968 - 20990888
Alignment:
Q  164 ctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    |||||||||||| ||||||||||| ||| ||||||||| ||||||||| |||  | ||||| ||| || |||||| |||||    
T  20990968 ctcgtgagcttaacttagttgttatagacaatgcataaaatatgcaaggttcagggttcaaaccccgaccaccacaaaaaa 20990888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 3197145 - 3197071
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcacca 237  Q
    |||||||||| |||||| ||||| ||| || ||||||||||||||||||| |||| ||||||| ||| || |||||    
T  3197145 tcctcgtgagtttagctcagttggtagggacaatgcataatatatgcaaggttcg-gattcaaaccccgaccacca 3197071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 20565139 - 20565092
Alignment:
Q  164 ctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||| ||||| ||| || |||||||||||||||||||    
T  20565139 ctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 20565092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 10735897 - 10735815
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    ||||||||||||||||| ||||| ||| ||  |||||||||||||||||| | || | ||||| ||| |  ||||||||||||    
T  10735897 tcctcgtgagcttagctcagttggtagggacgatgcataatatatgcaaggtccggggttcaaaccccggccaccaccaaaaa 10735815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 24520700 - 24520658
Alignment:
Q  167 gtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    |||||||||||||||||| || ||| |||||||||||||||||    
T  24520700 gtgagcttagcttagttggtaaagacaatgcataatatatgca 24520658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 24593375 - 24593453
Alignment:
Q  166 cgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    ||||||||||||| ||||| ||  || ||||||||||||||||||| | || | ||| | |||||| ||||||||||||    
T  24593375 cgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaaccctgaacaccaccaaaaa 24593453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 28195207 - 28195157
Alignment:
Q  161 atcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||||||||| ||||| ||| |||| |||||| ||||||||||    
T  28195207 atcctcgtgagcttagctcagttggtagggatattgcatattatatgcaag 28195157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 30243245 - 30243299
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcg 216  Q
    ||||||||| ||||||| ||||| |||||| |||||||||||||| |||| ||||    
T  30243245 tcctcgtgaacttagctcagttggtagagacaatgcataatatatacaaggttcg 30243299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 244
Target Start/End: Complemental strand, 31815957 - 31815871
Alignment:
Q  158 tatatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    ||||| |||||||||||| || ||||| ||| || ||||||||||||||||||| | || | ||||| ||| || |||||| |||||    
T  31815957 tatattctcgtgagcttaactcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccccgaccaccacaaaaaa 31815871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 3708689 - 3708737
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  3708689 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 3708737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 9383275 - 9383226
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  || |||||||||||||||||||    
T  9383275 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 9383226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 9842268 - 9842219
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||| || ||||||||| |||||||||    
T  9842268 tcctcgtgagcttagctcagttggtagggacaatgcataaaatatgcaag 9842219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 11868727 - 11868679
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  11868727 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 11868679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 11931600 - 11931649
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||| ||| ||| ||| || |||||||||||||||||||    
T  11931600 tcctcgtgagcttagtttaattggtagggacaatgcataatatatgcaag 11931649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 17778673 - 17778621
Alignment:
Q  158 tatatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||||||| || ||| ||||| |||| ||||||||    
T  17778673 tatatcctcgtgagcttagcttagttggtatagacaatgc-taatgtatgcaag 17778621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 24393244 - 24393289
Alignment:
Q  166 cgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||| ||||||||  || |||||||||||||||||||    
T  24393244 cgtgagcttagctcagttgttaaggacaatgcataatatatgcaag 24393289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 24592912 - 24592863
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||| ||||||| ||||| ||| || |||||||||||||||||||    
T  24592912 tcctcgtgaacttagctcagttggtagggacaatgcataatatatgcaag 24592863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 26999105 - 26999154
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||| ||||| | ||||| |||||| |||||||||||||||||||    
T  26999105 tcctcgtgaacttagttcagttggtagagacaatgcataatatatgcaag 26999154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 27152348 - 27152397
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||| ||||||||| || ||||| ||| ||||||||||||||||||||||    
T  27152348 tccttgtgagcttaactcagttggtagggataatgcataatatatgcaag 27152397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 31543007 - 31543056
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| || || ||  ||||||||||||||||||||||    
T  31543007 tcctcgtgagcttagctcagatggtatggataatgcataatatatgcaag 31543056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 33063981 - 33064030
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  || |||||||||||||||||||    
T  33063981 tcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaag 33064030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 35360120 - 35360072
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  35360120 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 35360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 35798100 - 35798051
Alignment:
Q  160 tatcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    ||||| |||||||||| || |||||||||||||| |||||| ||||||||    
T  35798100 tatccccgtgagcttaactcagttgttagagatattgcatattatatgca 35798051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 35820367 - 35820318
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||| || ||||||||||| |||||||    
T  35820367 tcctcgtgagcttagctcagttggtagggacaatgcataatacatgcaag 35820318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 43067658 - 43067743
Alignment:
Q  159 atatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    ||||||||||||||||| || ||||| |||  |||||| |||| ||||||||  |||| | ||||| |||||| |||||| |||||    
T  43067658 atatcctcgtgagcttaactcagttggtaggaataatgaataacatatgcaatgttcggggttcaaaccctgaccaccacaaaaaa 43067743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 45032688 - 45032737
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||||| || ||||| ||| || |||||||||||||||||||    
T  45032688 tcctcgtgagcttacctcagttggtagggacaatgcataatatatgcaag 45032737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 10332344 - 10332296
Alignment:
Q  159 atatcctcgtgagcttagcttagttgttagagataatgcataatatatg 207  Q
    |||||||||||||||||||| ||||| ||  || |||||||||||||||    
T  10332344 atatcctcgtgagcttagctcagttgataaggacaatgcataatatatg 10332296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 13000685 - 13000725
Alignment:
Q  167 gtgagcttagcttagttgttagagataatgcataatatatg 207  Q
    |||||||||||| ||||| || |||||||||||||||||||    
T  13000685 gtgagcttagctcagttggtaaagataatgcataatatatg 13000725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 15764927 - 15764975
Alignment:
Q  161 atcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    |||||||||||||||||| ||||| ||| |||| |||||| ||||||||    
T  15764927 atcctcgtgagcttagctcagttggtagggatattgcatattatatgca 15764975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 22571931 - 22571883
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    ||||||||| ||||||| ||||| || ||| ||||||||||||||||||    
T  22571931 tcctcgtgaacttagctcagttgatatagacaatgcataatatatgcaa 22571883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 22653721 - 22653669
Alignment:
Q  157 atatatcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    |||||||| ||||||||||||| ||||| ||| |||| |||||| ||||||||    
T  22653721 atatatccccgtgagcttagctcagttggtagggatattgcatattatatgca 22653669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 24033732 - 24033780
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    |||||||||||||||||  |||| |||||| ||||||||| ||||||||    
T  24033732 tcctcgtgagcttagctcggttggtagagacaatgcataaaatatgcaa 24033780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 27412901 - 27412857
Alignment:
Q  163 cctcgtgagcttagcttagttgttagagataatgcataatatatg 207  Q
    ||||||||||||| || ||||| |||||| |||||||||||||||    
T  27412901 cctcgtgagcttaactcagttggtagagacaatgcataatatatg 27412857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 28277742 - 28277694
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    |||||||||| |||||||||||| ||  || ||||||||||||||||||    
T  28277742 tcctcgtgagtttagcttagttggtaaggacaatgcataatatatgcaa 28277694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 37320579 - 37320499
Alignment:
Q  166 cgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaaga 246  Q
    |||||||||| || ||||| || ||| ||||||||||||||||||| |||| | ||| | || ||  ||||||||||||||    
T  37320579 cgtgagcttaactcagttggtaaagacaatgcataatatatgcaaggttcgaggttcgaaccatggacaccaccaaaaaga 37320499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 244
Target Start/End: Original strand, 38904054 - 38904138
Alignment:
Q  160 tatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    |||||||||||||||||||   ||| |||| | ||||||||||||||||||| |||  | ||||| |||| | |||||| |||||    
T  38904054 tatcctcgtgagcttagctcgattgatagatacaatgcataatatatgcaaggttcagggttcaaaccctaaccaccacaaaaaa 38904138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 41187523 - 41187475
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    ||||||||||||||||||||||| ||  || ||||||||| ||||||||    
T  41187523 tcctcgtgagcttagcttagttggtatggacaatgcataaaatatgcaa 41187475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 44857307 - 44857259
Alignment:
Q  161 atcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    |||||||||||||||||| ||||| ||| |||| |||||| ||||||||    
T  44857307 atcctcgtgagcttagctcagttggtagggatattgcatattatatgca 44857259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 27533238 - 27533322
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaaga 246  Q
    ||||||||||||||| | ||||| ||| || ||||||||||||||||||| |||| | ||||| ||| || ||||||||||||||    
T  27533238 tcctcgtgagcttagatcagttggtagggacaatgcataatatatgcaaggttcggggttcaaaccccgaccaccaccaaaaaga 27533322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 3935850 - 3935802
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    |||||||||||||| || |||||||| ||||||||||||||||||||||    
T  3935850 tcctcgtgagcttaactaagttgttatagataatgcataatatatgcaa 3935802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 11014227 - 11014294
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccct 229  Q
    |||||||||| |||||| ||||| |||||| | ||||||||||||||||| |||| ||||||| ||||    
T  11014227 tcctcgtgagtttagctcagttggtagagacagtgcataatatatgcaagattcgggattcaaaccct 11014294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 17139583 - 17139501
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    ||||||||||||||||| ||||| ||| || |||||||||||||| |||| | || | ||||| ||| || ||||||||||||    
T  17139583 tcctcgtgagcttagctcagttggtagggacaatgcataatatattcaaggtccggggttcaaaccccgaccaccaccaaaaa 17139501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 7925359 - 7925404
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatg 207  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||||    
T  7925359 tcctcgtgagcttagctcagttggtagagacaatgcataatatatg 7925404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 13054868 - 13054917
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||| |||||||||||||||||| ||| || |||||||||||||||||||    
T  13054868 tccttgtgagcttagcttagttggtagggacaatgcataatatatgcaag 13054917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 21400089 - 21400040
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||| || |||||||||||||||||||    
T  21400089 tcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 21400040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 36371106 - 36371061
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatg 207  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||||    
T  36371106 tcctcgtgagcttagctcagttggtagagacaatgcataatatatg 36371061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 41763221 - 41763172
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||| |||||||||||| |||||||||    
T  41763221 tcctcgtgagcttagctcagttggtagggataatgcataaaatatgcaag 41763172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 52441577 - 52441528
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| || ||| |||||||||||||||||||    
T  52441577 tcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaag 52441528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 16967257 - 16967206
Alignment:
Q  165 tcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcg 216  Q
    |||||||||||||||||||| ||  || ||||||||||||||||||| ||||    
T  16967257 tcgtgagcttagcttagttgatatggacaatgcataatatatgcaaggttcg 16967206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 44068853 - 44068892
Alignment:
Q  164 ctcgtgagcttagcttagttgttagagataatgcataata 203  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  44068853 ctcgtgagcttaacttagttggtagagataatgcataata 44068892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 44220980 - 44221031
Alignment:
Q  160 tatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||||||| |||||||| |||||| |||||| ||||||| ||||    
T  44220980 tatcctcgtgagcttaacttagttgatagagacaatgcacaatatatacaag 44221031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 1091174 - 1091256
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    |||||||||||||| || ||||| || ||| |||||||||| |||||||| |||| | ||||| | |||| |||||| |||||    
T  1091174 tcctcgtgagcttaactcagttggtatagacaatgcataatgtatgcaaggttcggggttcaaactctgaccaccacaaaaaa 1091256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 5503831 - 5503749
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    ||||||| ||||||||| ||||| |||| | ||||||||| |||| |||| |||| | ||||| | | |||||||||||||||    
T  5503831 tcctcgtaagcttagctcagttggtagaaacaatgcataaaatatacaaggttcggggttcaaactccgatcaccaccaaaaa 5503749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 13794571 - 13794525
Alignment:
Q  165 tcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||||| ||||| ||  ||||||||||||||||||||||    
T  13794571 tcgtgagcttagctcagttgataaggataatgcataatatatgcaag 13794525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 14880826 - 14880872
Alignment:
Q  165 tcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||||||||||  ||| || |||||||||||||||||||    
T  14880826 tcgtgagcttagcttagttagtagggacaatgcataatatatgcaag 14880872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 28979342 - 28979288
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcg 216  Q
    ||||| ||| ||||||| | ||| |||||||||||||||||||||||||| ||||    
T  28979342 tcctcctgaacttagctcatttgatagagataatgcataatatatgcaagattcg 28979288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 2352639 - 2352590
Alignment:
Q  160 tatcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    ||||| ||||||||||||| ||||| |||||||| |||||| ||||||||    
T  2352639 tatccccgtgagcttagctcagttgatagagatattgcatattatatgca 2352590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 5270803 - 5270758
Alignment:
Q  165 tcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    ||||||||||| || ||||  |||||||||||||||||||||||||    
T  5270803 tcgtgagcttaactcagttagtagagataatgcataatatatgcaa 5270758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 15729425 - 15729470
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatg 207  Q
    |||||||||||||| || ||||| |||||| |||||||||||||||    
T  15729425 tcctcgtgagcttaactcagttggtagagacaatgcataatatatg 15729470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 29506822 - 29506871
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||||| |||||||| || ||| ||| |||||||||||||||    
T  29506822 tcctcgtgagcttaacttagttggtatagacaatacataatatatgcaag 29506871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 34632164 - 34632213
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| || ||| |||| ||||||||||||||    
T  34632164 tcctcgtgagcttagctcagttggtatagacaatgtataatatatgcaag 34632213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 34808624 - 34808575
Alignment:
Q  167 gtgagcttagcttagttgttagagataatgcataatatatgcaagcttcg 216  Q
    |||||||||||| ||||||||  || ||||||||||||||||||| ||||    
T  34808624 gtgagcttagctcagttgttaaggacaatgcataatatatgcaaggttcg 34808575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 37098547 - 37098498
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||| || |||| ||||||||||||||    
T  37098547 tcctcgtgagcttagctcagttggtagggacaatgaataatatatgcaag 37098498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 42045438 - 42045389
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  || |||||||||||||||||||    
T  42045438 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 42045389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 2754356 - 2754404
Alignment:
Q  160 tatcctcgtgagcttagcttagttgttagagataatgcataatatatgc 208  Q
    ||||| ||||||||||||||||||| ||| |||| |||||| |||||||    
T  2754356 tatccccgtgagcttagcttagttggtagggatattgcatattatatgc 2754404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 7484760 - 7484716
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatat 206  Q
    ||||||||||||||||| || || |||||| ||||||||||||||    
T  7484760 tcctcgtgagcttagctcagctggtagagacaatgcataatatat 7484716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 18166597 - 18166645
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    |||||||| |||||||| ||||| || ||| ||||||||||||||||||    
T  18166597 tcctcgtgggcttagctcagttggtatagacaatgcataatatatgcaa 18166645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 32944731 - 32944779
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    |||| |||||||||||||||||| ||  || ||||||||||||||||||    
T  32944731 tccttgtgagcttagcttagttggtatggacaatgcataatatatgcaa 32944779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 34733397 - 34733445
Alignment:
Q  164 ctcgtgagcttagcttagttgttagagataatgcataatatatgcaagc 212  Q
    ||||||||||||||| ||||| ||  || ||||||||||||||||||||    
T  34733397 ctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaagc 34733445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 37662630 - 37662582
Alignment:
Q  161 atcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    |||||||||||||||||| ||||| ||| |||| |||||| ||||||||    
T  37662630 atcctcgtgagcttagctcagttggtagggatattgcatattatatgca 37662582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 209
Target Start/End: Original strand, 46965733 - 46965785
Alignment:
Q  157 atatatcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    |||||||| ||||||||||||| ||||| ||| |||| |||||| ||||||||    
T  46965733 atatatccccgtgagcttagctcagttggtagggatattgcatattatatgca 46965785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 51241498 - 51241534
Alignment:
Q  175 agcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||| |||||| |||||||||||||||||||    
T  51241498 agcttagttgatagagacaatgcataatatatgcaag 51241534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 37015902 - 37015853
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||||||||    
T  37015902 tcctcgtgagcttagctcagttggtagagacaatgcataatatatgcaag 37015853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 36018590 - 36018542
Alignment:
Q  168 tgagcttagcttagttgttagagataatgcataatatatgcaagcttcg 216  Q
    ||||||||||||||||| |||||| ||||||||||||||||||| ||||    
T  36018590 tgagcttagcttagttggtagagacaatgcataatatatgcaaggttcg 36018542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 10200755 - 10200706
Alignment:
Q  160 tatcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    ||||||||||||||||||| ||||| |||||||| |||||| ||||||||    
T  10200755 tatcctcgtgagcttagctcagttggtagagatattgcatattatatgca 10200706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 11708981 - 11709030
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||| || |||||||||||||||||||    
T  11708981 tcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 11709030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 13286126 - 13286175
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| || ||| |||||||||||||||||||    
T  13286126 tcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaag 13286175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 23816785 - 23816834
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  ||||||||||||||||||||||    
T  23816785 tcctcgtgagcttagctcagttggtaaggataatgcataatatatgcaag 23816834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 28084274 - 28084331
Alignment:
Q  159 atatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcg 216  Q
    ||||||||||||||||| || ||||| |||||| |||| |||||||||||||| ||||    
T  28084274 atatcctcgtgagcttaactcagttgatagagacaatgaataatatatgcaaggttcg 28084331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 33451415 - 33451366
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  ||||||||||||||||||||||    
T  33451415 tcctcgtgagcttagctcagttggtatggataatgcataatatatgcaag 33451366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 39821879 - 39821928
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||| || |||||||||||||||||||    
T  39821879 tcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 39821928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 17704005 - 17704057
Alignment:
Q  159 atatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||||||||||| ||||| ||  || |||||||||||||||||||    
T  17704005 atatcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaag 17704057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 32223945 - 32223897
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    ||||||||||||||| | ||||| |||||| ||||||||||||||||||    
T  32223945 tcctcgtgagcttagttcagttgatagagacaatgcataatatatgcaa 32223897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 8717546 - 8717487
Alignment:
Q  157 atatatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcg 216  Q
    ||||||||||||||| |||||| ||||| ||  || ||||||||||||||||||| ||||    
T  8717546 atatatcctcgtgagtttagctcagttggtatggacaatgcataatatatgcaaggttcg 8717487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 209
Target Start/End: Original strand, 18942913 - 18942960
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    |||| |||||||||||| ||||| ||| ||||||||||||||||||||    
T  18942913 tccttgtgagcttagctcagttggtagggataatgcataatatatgca 18942960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 22775623 - 22775705
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    ||||||||||||||||||||||| |   || |||||||||| |||||||| | || | ||||| |||||  ||||||||||||    
T  22775623 tcctcgtgagcttagcttagttggtttggacaatgcataatttatgcaaggtccggggttcaaaccctggccaccaccaaaaa 22775705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 8999958 - 8999909
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagaga-taatgcataatatatgcaa 210  Q
    ||||||||||||||||| ||||| ||||||  ||||||||||||||||||    
T  8999958 tcctcgtgagcttagctcagttggtagagacaaatgcataatatatgcaa 8999909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 11621170 - 11621219
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||| | ||||| |||||| ||| |||||||||||||||    
T  11621170 tcctcgtgagcttagttaagttggtagagaaaatacataatatatgcaag 11621219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 11771702 - 11771751
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||| ||||||||| ||||| |||||| ||| |||||||||||||||    
T  11771702 tcctcgtaagcttagctcagttgatagagacaatacataatatatgcaag 11771751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 18959141 - 18959198
Alignment:
Q  159 atatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcg 216  Q
    ||||||||  ||||||| || | ||||||| |||||||||||||||||||||| ||||    
T  18959141 atatcctctcgagcttaactcaattgttagggataatgcataatatatgcaaggttcg 18959198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 20665428 - 20665380
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  20665428 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 20665380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 27718960 - 27718911
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  || |||||||||||||||||||    
T  27718960 tcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaag 27718911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 30550791 - 30550743
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  30550791 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 30550743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 37999486 - 37999437
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||||| || ||||| ||  ||||||||||||||||||||||    
T  37999486 tcctcgtgagcttaactcagttggtatggataatgcataatatatgcaag 37999437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 44215540 - 44215492
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  44215540 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 44215492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 44293570 - 44293615
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatg 207  Q
    ||||||||||||||||| ||||| || ||| |||||||||||||||    
T  44293570 tcctcgtgagcttagctcagttggtatagacaatgcataatatatg 44293615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 10152448 - 10152500
Alignment:
Q  159 atatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||||||||||| ||||| || ||| |||| |||| |||||||||    
T  10152448 atatcctcgtgagcttagctcagttggtatagacaatgtataaaatatgcaag 10152500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 11236985 - 11236949
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgca 198  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  11236985 tcctcgtgagcttagcttagttgatagggataatgca 11236949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 12714438 - 12714382
Alignment:
Q  160 tatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcg 216  Q
    |||||||||||| |||||| |||||  || || ||||||||||||||||||| ||||    
T  12714438 tatcctcgtgagtttagctcagttggaagggacaatgcataatatatgcaaggttcg 12714382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 20540179 - 20540131
Alignment:
Q  161 atcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    |||| ||||||||||||| ||||||||| |||| |||||| ||||||||    
T  20540179 atccccgtgagcttagctcagttgttagggatattgcatattatatgca 20540131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 28219863 - 28219907
Alignment:
Q  167 gtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||| ||||||||  ||||||||||||||| ||||||    
T  28219863 gtgagcttagctcagttgttaaggataatgcataatatttgcaag 28219907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 37938490 - 37938538
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    |||||||||| |||||| ||||| ||  |||||||||||||||||||||    
T  37938490 tcctcgtgagtttagctcagttggtatggataatgcataatatatgcaa 37938538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 44654991 - 44655039
Alignment:
Q  164 ctcgtgagcttagcttagttgttagagataatgcat-aatatatgcaag 211  Q
    ||||||||||||||||||||| || ||| ||||||| ||||||||||||    
T  44654991 ctcgtgagcttagcttagttgatatagacaatgcataaatatatgcaag 44655039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 12412272 - 12412321
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||||| |||||||| |||||| |||||||||||||||||||    
T  12412272 tcctcgtgagcttaacttagttggtagagacaatgcataatatatgcaag 12412321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 12079 - 12028
Alignment:
Q  159 atatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    |||||| |||||| |||||| ||||| |||||||||||||||||||||||||    
T  12079 atatccccgtgagtttagctcagttgatagagataatgcataatatatgcaa 12028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 331952 - 331890
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaa 224  Q
    |||||||||||||| || ||||| |||||| ||||||||||||||||||| || | |||||||    
T  331952 tcctcgtgagcttaactcagttggtagagacaatgcataatatatgcaaggtttgggattcaa 331890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 14552333 - 14552414
Alignment:
Q  163 cctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    ||||||||||||| || ||||| ||||||||||||||||||||| |||| |||  ||||| | |||  |||||||| |||||    
T  14552333 cctcgtgagcttaactcagttgatagagataatgcataatatatacaaggttcaggattcgaacccccatcaccactaaaaa 14552414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 27080746 - 27080682
Alignment:
Q  180 agttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    |||||||||||| |||||||||||||||||||||  | ||||||| ||| || |||||| |||||    
T  27080746 agttgttagagacaatgcataatatatgcaagctctgggattcaaaccccgaccaccacaaaaaa 27080682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 10780171 - 10780124
Alignment:
Q  164 ctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||| ||||| ||| || |||||||||||||||||||    
T  10780171 ctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 10780124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 3640511 - 3640561
Alignment:
Q  161 atcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||||||||| ||||| ||| |||| |||||| ||||||||||    
T  3640511 atcctcgtgagcttagctcagttggtagggatattgcatagtatatgcaag 3640561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 32053783 - 32053837
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcg 216  Q
    ||||||||||||||||| ||||| ||  || ||||||||||||||||||| ||||    
T  32053783 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggttcg 32053837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 247655 - 247703
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  247655 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 247703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 4450261 - 4450306
Alignment:
Q  166 cgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||| ||||| || ||| |||||||||||||||||||    
T  4450261 cgtgagcttagctcagttgataaagacaatgcataatatatgcaag 4450306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 7081720 - 7081671
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| || ||| ||| |||||||||||||||    
T  7081720 tcctcgtgagcttagctcagttgataaagacaatacataatatatgcaag 7081671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 8810635 - 8810684
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| || ||| ||| |||||||||||||||    
T  8810635 tcctcgtgagcttagctcagttggtaaagacaatacataatatatgcaag 8810684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 9392734 - 9392685
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||||||   | |||||||||||||||||||    
T  9392734 tcctcgtgagcttagctcagttgttatgaaaaatgcataatatatgcaag 9392685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 14945574 - 14945517
Alignment:
Q  167 gtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaa 224  Q
    |||||||||||| ||||| |||||| | ||||||||||||| ||| |||| |||||||    
T  14945574 gtgagcttagctcagttgatagagacagtgcataatatatgtaaggttcgggattcaa 14945517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 16404020 - 16403975
Alignment:
Q  166 cgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||| || |||||  |||||||||||||||||||||||||    
T  16404020 cgtgagcttaactcagttggcagagataatgcataatatatgcaag 16403975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 17151231 - 17151280
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||| || ||| |||||||||||||||    
T  17151231 tcctcgtgagcttagctaagttggtagtgacaatacataatatatgcaag 17151280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 18256878 - 18256927
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  || |||||||||||||||||||    
T  18256878 tcctcgtgagcttagctcagttgataaggacaatgcataatatatgcaag 18256927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 20744133 - 20744182
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  || |||||||||||||||||||    
T  20744133 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 20744182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 30370216 - 30370171
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatg 207  Q
    ||||||||||||||| | ||||| || |||||||||||||||||||    
T  30370216 tcctcgtgagcttagttcagttggtaaagataatgcataatatatg 30370171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 33976240 - 33976288
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  33976240 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 33976288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 2617266 - 2617226
Alignment:
Q  167 gtgagcttagcttagttgttagagataatgcataatatatg 207  Q
    ||||||||| |||||||| |||||| |||||||||||||||    
T  2617266 gtgagcttaacttagttggtagagacaatgcataatatatg 2617226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 4661093 - 4661141
Alignment:
Q  161 atcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    |||| ||||||||||||||||||| ||| |||| |||||| ||||||||    
T  4661093 atccccgtgagcttagcttagttggtagggatattgcatattatatgca 4661141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 15046983 - 15046935
Alignment:
Q  161 atcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    ||||||||||| |||||||| ||| || ||| |||||||||||||||||    
T  15046983 atcctcgtgagtttagcttaattgatatagacaatgcataatatatgca 15046935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 17382072 - 17382128
Alignment:
Q  155 agatatatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||| ||||||||||||||||||| ||||| ||  || |||| ||||||||||||||    
T  17382072 agatttatcctcgtgagcttagctcagttggtatggacaatgtataatatatgcaag 17382128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 23903372 - 23903325
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    ||||||||||||||||| ||||| || ||| ||||||||||||||||||    
T  23903372 tcctcgtgagcttagctgagttggta-agacaatgcataatatatgcaa 23903325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 41527553 - 41527604
Alignment:
Q  160 tatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||||| ||  || |||||||||||||||||||    
T  41527553 tatcctcgtgagcttagcttagttggtatggacaatgcataatatatgcaag 41527604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 36803833 - 36803912
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataata----tatgcaagcttcgcgattcaagccctgatcacca 237  Q
    ||||||||||||||||| ||||| |||||| |||||||||||    |||||||| |||| ||||||| |||||| |||||    
T  36803833 tcctcgtgagcttagctcagttggtagagacaatgcataatatatttatgcaagattcgggattcaaaccctgaccacca 36803912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 3584199 - 3584280
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaa 243  Q
    |||||| ||||||| |||||||| ||  || ||||||||||||||||||| | || ||||||| ||| || |||||||||||    
T  3584199 tcctcgcgagcttaacttagttggtaaggacaatgcataatatatgcaaggtacgagattcaaaccccgaccaccaccaaaa 3584280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 4047781 - 4047829
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||    
T  4047781 tcctcgtgagcttagctcagttgatag-gataatgcataatatatgcaag 4047829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 8683065 - 8683114
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| || ||| |||||||||||||||||||    
T  8683065 tcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaag 8683114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 26816735 - 26816682
Alignment:
Q  157 atatatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    |||| ||| ||||||||||||| ||||| ||| |||||||||||||||||||||    
T  26816735 atatgtccccgtgagcttagctcagttggtagggataatgcataatatatgcaa 26816682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 5833041 - 5833085
Alignment:
Q  166 cgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||||    
T  5833041 cgtgagcttagctcagttggtagggataatgcataatatatgcaa 5833085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 768174 - 768123
Alignment:
Q  160 tatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||| ||||| | | || |||||||||||||||||||    
T  768174 tatcctcgtgagcttagctgagttggttgggacaatgcataatatatgcaag 768123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 11780410 - 11780457
Alignment:
Q  164 ctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||| ||||||||||||| |||||  |||||||||||||||||||    
T  11780410 ctcgtgatcttagcttagttggtagaggcaatgcataatatatgcaag 11780457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 21554997 - 21554918
Alignment:
Q  165 tcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    ||||||||||| |||||||| ||| |||||||| ||||||||||||| | |  ||||||| ||| || |||||| |||||    
T  21554997 tcgtgagcttaacttagttggtagggataatgcttaatatatgcaaggtccaggattcaaaccccgaccaccacaaaaaa 21554918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 22267576 - 22267651
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcacca 237  Q
    |||||||||| ||| || ||||| |||||| ||||||||||||||| ||| |||  ||||||| ||| ||||||||    
T  22267576 tcctcgtgagtttaactcagttggtagagacaatgcataatatatgtaagattcaggattcaaaccccgatcacca 22267651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 40954157 - 40954204
Alignment:
Q  164 ctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||| ||||||| ||||||||||| |||| |||||||||    
T  40954157 ctcgtgagcttagattagttggtagagataatgtataaaatatgcaag 40954204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 7388105 - 7388023
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    |||||||||||||| || ||||| | | || ||||||||||||||| ||| |||| ||||||| ||| || |||||| |||||    
T  7388105 tcctcgtgagcttaactcagttggttgggacaatgcataatatatgtaaggttcgggattcaaaccccgaccaccacaaaaaa 7388023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 8879811 - 8879753
Alignment:
Q  164 ctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattc 222  Q
    |||||||||||| || ||||| || ||| ||||||||||||||||||| |||| |||||    
T  8879811 ctcgtgagcttaactcagttggtatagacaatgcataatatatgcaaggttcgggattc 8879753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 13730164 - 13730122
Alignment:
Q  167 gtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    |||||||||||||||||| |||||||| |||||| ||||||||    
T  13730164 gtgagcttagcttagttggtagagatattgcatattatatgca 13730122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 30650861 - 30650815
Alignment:
Q  165 tcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||||| ||||||||| || ||||||||| |||||||||    
T  30650861 tcgtgagcttagctaagttgttagggacaatgcataaaatatgcaag 30650815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 42435461 - 42435415
Alignment:
Q  165 tcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||||| ||||| ||||||  ||||||||||||||||||    
T  42435461 tcgtgagcttagctcagttggtagagactatgcataatatatgcaag 42435415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 1076979 - 1077028
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| |||||||   |||||||||| |||||||||||    
T  1076979 tcctcgtgagcttagctcagttgttttggataatgcatgatatatgcaag 1077028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 10244722 - 10244771
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  || |||||||||||||||||||    
T  10244722 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 10244771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 19036167 - 19036119
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  19036167 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 19036119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 20718469 - 20718517
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  20718469 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 20718517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 20763150 - 20763198
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  20763150 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 20763198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 22690102 - 22690053
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||   |||||||||||||||||||||    
T  22690102 tcctcgtgagcttagctcagttgctaagaataatgcataatatatgcaag 22690053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 29488716 - 29488764
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  29488716 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 29488764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 30857243 - 30857292
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||| |||||||||||| ||  || |||||||||||||||||||    
T  30857243 tcctcgtgagtttagcttagttggtatggacaatgcataatatatgcaag 30857292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 33232462 - 33232414
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  33232462 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 33232414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 34284604 - 34284556
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  34284604 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 34284556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 39801701 - 39801750
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  || |||||||||||||||||||    
T  39801701 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 39801750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 3953434 - 3953490
Alignment:
Q  160 tatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcg 216  Q
    ||||||||||||||||||| ||| | ||  || ||||||||||||||||||| ||||    
T  3953434 tatcctcgtgagcttagctcagtcggtatggacaatgcataatatatgcaaggttcg 3953490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 5584642 - 5584690
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    ||||||||||||||||| | ||| || ||||||| ||||||||||||||    
T  5584642 tcctcgtgagcttagctcaattggtaaagataatacataatatatgcaa 5584690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 5589602 - 5589650
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    ||||||||||||||||| | ||| || ||||||| ||||||||||||||    
T  5589602 tcctcgtgagcttagctcaattggtaaagataatacataatatatgcaa 5589650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 7838497 - 7838537
Alignment:
Q  173 ttagcttagttgttagagataatgcataatatatgcaagct 213  Q
    |||||| ||||| |||||||||| |||||||||||||||||    
T  7838497 ttagctcagttggtagagataatacataatatatgcaagct 7838537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 12772112 - 12772160
Alignment:
Q  161 atcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    |||||||||||||||||| ||||| ||| |||| |||||| ||||||||    
T  12772112 atcctcgtgagcttagctcagttggtagggatattgcatattatatgca 12772160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 17816508 - 17816564
Alignment:
Q  155 agatatatcctcgtgagcttagcttagttgttagagataatgcat-aatatatgcaa 210  Q
    |||| ||||||||||||||||||  ||||| |||||| ||||||| |||||||||||    
T  17816508 agatttatcctcgtgagcttagcccagttgatagagacaatgcataaatatatgcaa 17816564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 19050493 - 19050437
Alignment:
Q  155 agatatatcctcgtgagcttagcttagttgttagagataatgcat-aatatatgcaa 210  Q
    |||| ||||||||||||||||||  ||||| |||||| ||||||| |||||||||||    
T  19050493 agatttatcctcgtgagcttagcccagttgatagagacaatgcataaatatatgcaa 19050437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 25246767 - 25246815
Alignment:
Q  163 cctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||| |||||| ||||| || ||| |||||||||||||||||||    
T  25246767 cctcgtgagtttagctcagttgataaagacaatgcataatatatgcaag 25246815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 35142215 - 35142167
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    ||||||||||||||||| ||||| ||  || ||||||||||||||||||    
T  35142215 tcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaa 35142167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 37930039 - 37930115
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccac 238  Q
    |||||||||||||| || ||||| ||  || ||||||||||||||||| | |||| ||||||| ||| || ||||||    
T  37930039 tcctcgtgagcttatctcagttggtaaggacaatgcataatatatgcaggattcgggattcaaaccccgaccaccac 37930115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 244
Target Start/End: Complemental strand, 16701648 - 16701565
Alignment:
Q  161 atcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    |||||||||||||||||| ||||| ||| || |||| |||||||||||||| | || ||||||| ||| || |||||| |||||    
T  16701648 atcctcgtgagcttagctcagttggtagggacaatgaataatatatgcaaggtccgggattcaaaccccgaccaccacaaaaaa 16701565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 19248474 - 19248556
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    ||||||||||||||||| ||||| || ||| ||||||||||||||||||  || | | |||||  |||| |||||||||||||    
T  19248474 tcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaatgtttggggttcaaatcctggtcaccaccaaaaa 19248556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 20175822 - 20175876
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcg 216  Q
    |||||||||||||| || |||||||||||| ||||||||| ||||||||| ||||    
T  20175822 tcctcgtgagcttaactcagttgttagagacaatgcataaaatatgcaagattcg 20175876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 24485694 - 24485748
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcg 216  Q
    ||||||||||||||||||||||| ||  || ||||||||||||||||||| ||||    
T  24485694 tcctcgtgagcttagcttagttggtatggacaatgcataatatatgcaaggttcg 24485748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 27679497 - 27679547
Alignment:
Q  166 cgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcg 216  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||| ||||    
T  27679497 cgtgagcttagctcagttggtaaagataatgcataatatatgcaaggttcg 27679547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 32200513 - 32200431
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    ||||||||||||||||| |||||  || || ||||||||||||||||||| | || | ||||||||| || ||||| ||||||    
T  32200513 tcctcgtgagcttagctcagttgacagggacaatgcataatatatgcaaggtccggggttcaagccccgaccaccaacaaaaa 32200431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 6489002 - 6489051
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||| || |||||||||||||||||||    
T  6489002 tcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 6489051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 15889406 - 15889455
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||| || |||||||||||||||||||    
T  15889406 tcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 15889455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 18538603 - 18538652
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||| |||||| ||||| |||||| |||||||||||||||||||    
T  18538603 tcctcgtgagtttagctaagttggtagagacaatgcataatatatgcaag 18538652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 20370196 - 20370147
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||| ||||    
T  20370196 tcctcgtgagcttagctcagttggtagggataatgcataatatatacaag 20370147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 34436846 - 34436895
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||| || |||||||||||||||||||    
T  34436846 tcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 34436895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 5485181 - 5485229
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    ||||||||||||||||| ||||| ||| || ||||||||||||||||||    
T  5485181 tcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 5485229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 6898020 - 6898064
Alignment:
Q  166 cgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    |||||||||| |||||||| || ||||||||||||||||||||||    
T  6898020 cgtgagcttaacttagttggtaaagataatgcataatatatgcaa 6898064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 11017169 - 11017220
Alignment:
Q  160 tatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||| |||||| |||||| ||||| ||| ||||||||||||||||||||||    
T  11017169 tatccgcgtgagtttagctcagttggtagggataatgcataatatatgcaag 11017220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 36739651 - 36739600
Alignment:
Q  160 tatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||| |||| ||   ||||||||||||||||||||||    
T  36739651 tatcctcgtgagcttagctcagttatttttgataatgcataatatatgcaag 36739600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 37614490 - 37614439
Alignment:
Q  165 tcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcg 216  Q
    |||||||||||||| ||||| |||||| || |||||||||||||||| ||||    
T  37614490 tcgtgagcttagctcagttggtagagacaacgcataatatatgcaaggttcg 37614439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 1808659 - 1808577
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    ||||||||| ||||||| ||||| ||  |||||||||||| ||||||||| ||||  |||| | ||| || ||||||||||||    
T  1808659 tcctcgtgaacttagctcagttggtatggataatgcataaaatatgcaaggttcggaattcgatccccgaccaccaccaaaaa 1808577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 39919168 - 39919118
Alignment:
Q  159 atatcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    |||||| ||||||||||||||||||| ||| |||| |||||| ||||||||    
T  39919168 atatccccgtgagcttagcttagttggtagggatattgcatattatatgca 39919118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 9893737 - 9893688
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||| |||||||||| ||||| || ||||||||||||| |||||||||    
T  9893737 tcctcgcgagcttagctcagttgatatagataatgcataaaatatgcaag 9893688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 17210775 - 17210726
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||| || | |||||||||||||||||    
T  17210775 tcctcgtgagcttagctcagttggtagggacagtgcataatatatgcaag 17210726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 20211275 - 20211324
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||||| || ||||| ||| |||||| |||||||||||||||    
T  20211275 tcctcgtgagcttatctcagttggtagggataatacataatatatgcaag 20211324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 32565519 - 32565564
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatg 207  Q
    ||||||||||||||||| || || ||| ||||||||||||||||||    
T  32565519 tcctcgtgagcttagctcagctggtagggataatgcataatatatg 32565564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 36321560 - 36321511
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  || |||||||||||||||||||    
T  36321560 tcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaag 36321511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 37462107 - 37462155
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  37462107 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 37462155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 37932325 - 37932374
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  || |||||||||||||||||||    
T  37932325 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 37932374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 39980504 - 39980585
Alignment:
Q  163 cctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    |||||||||||||||| ||||| ||  |||||||||||| ||||||||| | ||   ||||| ||| || ||||||||||||    
T  39980504 cctcgtgagcttagctcagttggtatggataatgcataaaatatgcaaggtccggagttcaaaccccgaccaccaccaaaaa 39980585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 43358255 - 43358304
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| || |||||||| |||| |||||||||    
T  43358255 tcctcgtgagcttagctcagttggtatagataatgtataaaatatgcaag 43358304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 1745979 - 1746023
Alignment:
Q  167 gtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||| || |||||||| |||||||| ||||||||||||||    
T  1745979 gtgagcttaactcagttgttaaagataatgtataatatatgcaag 1746023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 2328589 - 2328637
Alignment:
Q  161 atcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    |||| ||||||||||||||||||| ||| |||| |||||| ||||||||    
T  2328589 atccccgtgagcttagcttagttggtagggatattgcatattatatgca 2328637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 2642825 - 2642781
Alignment:
Q  166 cgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    |||||| ||| |||||||| ||| |||||||||||||||||||||    
T  2642825 cgtgagtttaacttagttggtagggataatgcataatatatgcaa 2642781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 17861974 - 17862022
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    |||||||||| |||||| ||||| ||| || ||||||||||||||||||    
T  17861974 tcctcgtgagtttagctcagttggtagggacaatgcataatatatgcaa 17862022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 244
Target Start/End: Complemental strand, 19068499 - 19068424
Alignment:
Q  168 tgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    ||||||||||| ||||| ||  |||||||||||||||||||||| || | | ||||| ||| ||||||||| |||||    
T  19068499 tgagcttagctcagttggtatggataatgcataatatatgcaaggtt-ggggttcaaaccccgatcaccacgaaaaa 19068424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 27721741 - 27721693
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    ||||||||||||||||| ||||| |||  | ||||||||||||||||||    
T  27721741 tcctcgtgagcttagctcagttggtaggaacaatgcataatatatgcaa 27721693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 24120487 - 24120404
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataa-tgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    ||||||||||||||||| ||||| |||||| || ||||||||||||||||| | |||| ||||| | | ||||||||| |||||    
T  24120487 tcctcgtgagcttagctcagttggtagagacaaatgcataatatatgcaagatccgcggttcaaactccgatcaccacaaaaaa 24120404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 21331483 - 21331429
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcg 216  Q
    ||||||||||||||||| ||||||||  || ||||||||||||||||||| ||||    
T  21331483 tcctcgtgagcttagctcagttgttatggacaatgcataatatatgcaaggttcg 21331429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 29631181 - 29631263
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    ||||| ||||||||||| ||||| ||  || ||||||||||||||||||| |||| ||||||| ||| |  ||||||||||||    
T  29631181 tcctcatgagcttagctcagttggtatggacaatgcataatatatgcaaggttcgggattcaaaccccggccaccaccaaaaa 29631263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 33223863 - 33223917
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcg 216  Q
    ||||||||||||||||| ||||| |||| | ||||||||||||||||||| ||||    
T  33223863 tcctcgtgagcttagctcagttggtagaaacaatgcataatatatgcaaggttcg 33223917  T

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Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 37921066 - 37921016
Alignment:
Q  160 tatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    |||||||||||| |||||| ||||| ||| |||||||||||||||||||||    
T  37921066 tatcctcgtgagtttagctcagttgatagggataatgcataatatatgcaa 37921016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 18870791 - 18870742
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||| || |||||||||||||||||||    
T  18870791 tcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 18870742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 38387967 - 38388016
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||| || |||||||||||||||||||    
T  38387967 tcctcgtgagcttagctcagttgatagtgacaatgcataatatatgcaag 38388016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 48315090 - 48315041
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  ||||||||||||||||||||||    
T  48315090 tcctcgtgagcttagctcagttggtaaggataatgcataatatatgcaag 48315041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 48376830 - 48376875
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatg 207  Q
    ||||||||||||||||| ||||| || |||||||||||||||||||    
T  48376830 tcctcgtgagcttagctcagttggtaaagataatgcataatatatg 48376875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 2368933 - 2368981
Alignment:
Q  161 atcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    |||||||||||||||||| ||||||||| |||| |||||| ||||||||    
T  2368933 atcctcgtgagcttagctcagttgttagggatattgcatattatatgca 2368981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 8139708 - 8139759
Alignment:
Q  160 tatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||||| ||  || |||||||||||||||||||    
T  8139708 tatcctcgtgagcttagtttagttggtatggacaatgcataatatatgcaag 8139759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 7738664 - 7738746
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    |||||||||||||| || ||||| ||| || ||||||||| ||||||||| | || | ||||||||| | |||| ||||||||    
T  7738664 tcctcgtgagcttaactcagttggtagggacaatgcataaaatatgcaaggtccggggttcaagccccggtcacaaccaaaaa 7738746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 7974575 - 7974529
Alignment:
Q  165 tcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||||| ||||| ||  ||||||||||||||||||||||    
T  7974575 tcgtgagcttagctcagttggtatggataatgcataatatatgcaag 7974529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 16793040 - 16792958
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    ||||||||||||||||  ||||| || ||| ||||||||||||||||||| | |  | ||||| ||| | |||||||||||||    
T  16793040 tcctcgtgagcttagcacagttggtatagacaatgcataatatatgcaaggtccagggttcaaaccccggtcaccaccaaaaa 16792958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 16980425 - 16980371
Alignment:
Q  157 atatatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||| ||||||||||||||||| ||||| ||  || |||||||||||||||||||    
T  16980425 atatgtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaag 16980371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 20370352 - 20370298
Alignment:
Q  157 atatatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||||||||||||||||||| ||||| ||  || ||||||||| |||||||||    
T  20370352 atatatcctcgtgagcttagctcagttgatatggacaatgcataaaatatgcaag 20370298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 30779642 - 30779592
Alignment:
Q  159 atatcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    |||||||||||||||||||| ||||| ||| |||| |||||| ||||||||    
T  30779642 atatcctcgtgagcttagctcagttggtagggatattgcatattatatgca 30779592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 34334070 - 34334116
Alignment:
Q  161 atcctcgtgagcttagcttagttgttagagataatgcataatatatg 207  Q
    ||||||||||| |||||||||||| || ||||||| |||||||||||    
T  34334070 atcctcgtgagtttagcttagttgatatagataatacataatatatg 34334116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 43316667 - 43316617
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcat-aatatatgcaag 211  Q
    ||||||||||||||||| ||||| || ||||||||||| ||||||||||||    
T  43316667 tcctcgtgagcttagctcagttgatatagataatgcataaatatatgcaag 43316617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 48924385 - 48924303
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattcaagccctgatcaccaccaaaaa 244  Q
    |||||||||| |||||||||||| ||| || |||| ||||||||| ||| ||  | ||||||| |||||| |||||| |||||    
T  48924385 tcctcgtgagtttagcttagttggtagggacaatgtataatatatacaaactgtgagattcaaaccctgaccaccacaaaaaa 48924303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 376641 - 376690
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||| |||||| ||  |||| ||||||||||||||||||||||||||    
T  376641 tcctcgtaagcttaactcggttggtagagataatgcataatatatgcaag 376690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 916435 - 916483
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  916435 tcctcgtgagcttagcttagttggtag-gacaatgcataaaatatgcaag 916483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 1149135 - 1149086
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  || |||||||||||||||||||    
T  1149135 tcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaag 1149086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 10498761 - 10498712
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| ||  || |||||||||||||||||||    
T  10498761 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaag 10498712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 31138412 - 31138461
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||| |||||| || ||||| |||||| |||||||||||||||||||    
T  31138412 tcctcgtaagcttatctcagttgatagagacaatgcataatatatgcaag 31138461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 44685241 - 44685196
Alignment:
Q  161 atcctcgtgagcttagcttagttgttagagataatgcataatatat 206  Q
    |||| ||||||||||||||||||| |||||||| |||||| |||||    
T  44685241 atccccgtgagcttagcttagttggtagagatattgcatattatat 44685196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 52453320 - 52453275
Alignment:
Q  165 tcgtgagcttagcttagttgttagagataatgcataatatatgcaa 210  Q
    |||||||||||||||||||  ||| || ||||||||||||||||||    
T  52453320 tcgtgagcttagcttagttaatagggacaatgcataatatatgcaa 52453275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 5239782 - 5239838
Alignment:
Q  155 agatatatcctcgtgagcttagcttagttgttagagataatgcat-aatatatgcaa 210  Q
    |||| ||||||||||||||||||  ||||| |||||| ||||||| |||||||||||    
T  5239782 agatttatcctcgtgagcttagcccagttgatagagacaatgcataaatatatgcaa 5239838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 38309640 - 38309600
Alignment:
Q  171 gcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    |||||| ||||||| || |||||||||||||||||||||||    
T  38309640 gcttagtttagttgatatagataatgcataatatatgcaag 38309600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 43777128 - 43777068
Alignment:
Q  156 gatatatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcg 216  Q
    ||||| || |||||||||||||| ||||| ||| ||  |||||||||||||||||| ||||    
T  43777128 gatatgtcttcgtgagcttagctcagttggtagggaccatgcataatatatgcaaggttcg 43777068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 49097265 - 49097321
Alignment:
Q  160 tatcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcg 216  Q
    |||||||||||||||| || ||||| |||||  ||||||||| ||||||||| ||||    
T  49097265 tatcctcgtgagcttatctcagttggtagagccaatgcataaaatatgcaaggttcg 49097321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 50536905 - 50536857
Alignment:
Q  161 atcctcgtgagcttagcttagttgttagagataatgcataatatatgca 209  Q
    |||| ||||||||||||| ||||| |||||||| |||||| ||||||||    
T  50536905 atccccgtgagcttagctcagttggtagagatattgcatattatatgca 50536857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 90471 - 90532
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaagcttcgcgattca 223  Q
    ||||||||||||||||||||||| || ||| ||||| ||||||||| ||| |||| ||||||    
T  90471 tcctcgtgagcttagcttagttggtatagacaatgcgtaatatatgtaaggttcgagattca 90532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 91624 - 91579
Alignment:
Q  166 cgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||||    
T  91624 cgtgagcttagctcagttgttaaggataatgcataatatatgcaag 91579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 3136 - 3185
Alignment:
Q  162 tcctcgtgagcttagcttagttgttagagataatgcataatatatgcaag 211  Q
    ||||||||||||||||| ||||| || ||| ||| |||||||||||||||    
T  3136 tcctcgtgagcttagctcagttggtaaagacaatacataatatatgcaag 3185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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