View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2258_1D_low_2 (Length: 721)
Name: NF2258_1D_low_2
Description: NF2258_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2258_1D_low_2 |
 | |
|
| [»] scaffold0363 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 317; Significance: 1e-178; HSPs: 17)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 12 - 532
Target Start/End: Original strand, 12188503 - 12189020
Alignment:
| Q |
12 |
aagatctttccctagtaacttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaagcaactacct |
111 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
12188503 |
aagatcttcccctagtagcttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaagaagcaactacct |
12188602 |
T |
|
| Q |
112 |
tcatatatgaaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccctaaattccaatagttctaacttctcttgaat |
211 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
12188603 |
tcatatctggaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccccaaattccaatagttctaacttctcttgagt |
12188702 |
T |
|
| Q |
212 |
caatttttaataatgattcaatgcttgaatagttttcatctagtatgaacaaacatctaagctcattggtatacttttgattcagtttttgggaaactgc |
311 |
Q |
| |
|
|| |||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| |
|
|
| T |
12188703 |
catcttttaaaaatgattcaatgcttgaatagtcttcatctggtatgaacaaacatctaagctcatttgtatacttttgattcaatttttggagaactgc |
12188802 |
T |
|
| Q |
312 |
tttgatgatgtcatctatcaagtaattttcagtcctaaaatgtaagaatactgataaatgttagtatataaaaggagactgtaaattaattaataattag |
411 |
Q |
| |
|
|||||||||||| | ||||||| | |||||||||||||| ||||||||| |||||||||||| |||||||||| || ||||||| ||||||||||| |
|
|
| T |
12188803 |
tttgatgatgtctccaatcaagtcagattcagtcctaaaatataagaatac-gataaatgttagagtataaaaggattctataaattagttaataattag |
12188901 |
T |
|
| Q |
412 |
acgatacaatataattcaagaaaatttgtatccattttataaacnnnnnnnngaaattgcaaatagaataatactaaatgatcatccccat-cttgtaag |
510 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||| | ||||| |||| |||||||||| |||| |||||||| || ||||||| |
|
|
| T |
12188902 |
aggatacaatataattcaagaaaatttgtatccattttataacc--aagaaagaaatagcaagtagaataata-aaaattatcatccctatatttgtaag |
12188998 |
T |
|
| Q |
511 |
aaacaaatcattaaaaaatgta |
532 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
12188999 |
aaacaaatcatttaaaaatgta |
12189020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 12 - 532
Target Start/End: Original strand, 12432931 - 12433448
Alignment:
| Q |
12 |
aagatctttccctagtaacttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaagcaactacct |
111 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
12432931 |
aagatcttcccctagtagcttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaagaagcaactacct |
12433030 |
T |
|
| Q |
112 |
tcatatatgaaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccctaaattccaatagttctaacttctcttgaat |
211 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
12433031 |
tcatatctggaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccccaaattccaatagttctaacttctcttgagt |
12433130 |
T |
|
| Q |
212 |
caatttttaataatgattcaatgcttgaatagttttcatctagtatgaacaaacatctaagctcattggtatacttttgattcagtttttgggaaactgc |
311 |
Q |
| |
|
|| |||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| |
|
|
| T |
12433131 |
catcttttaaaaatgattcaatgcttgaatagtcttcatctggtatgaacaaacatctaagctcatttgtatacttttgattcaatttttggagaactgc |
12433230 |
T |
|
| Q |
312 |
tttgatgatgtcatctatcaagtaattttcagtcctaaaatgtaagaatactgataaatgttagtatataaaaggagactgtaaattaattaataattag |
411 |
Q |
| |
|
|||||||||||| | ||||||| | |||||||||||||| ||||||||| |||||||||||| |||||||||| || ||||||| ||||||||||| |
|
|
| T |
12433231 |
tttgatgatgtctccaatcaagtcagattcagtcctaaaatataagaatac-gataaatgttagagtataaaaggattctataaattagttaataattag |
12433329 |
T |
|
| Q |
412 |
acgatacaatataattcaagaaaatttgtatccattttataaacnnnnnnnngaaattgcaaatagaataatactaaatgatcatccccat-cttgtaag |
510 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||| | ||||| |||| |||||||||| |||| |||||||| || ||||||| |
|
|
| T |
12433330 |
aggatacaatataattcaagaaaatttgtatccattttataacc--aagaaagaaatagcaagtagaataata-aaaattatcatccctatatttgtaag |
12433426 |
T |
|
| Q |
511 |
aaacaaatcattaaaaaatgta |
532 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
12433427 |
aaacaaatcatttaaaaatgta |
12433448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 12 - 371
Target Start/End: Original strand, 12177182 - 12177541
Alignment:
| Q |
12 |
aagatctttccctagtaacttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaagcaactacct |
111 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12177182 |
aagatcttcccctagtaacttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaagcaactacct |
12177281 |
T |
|
| Q |
112 |
tcatatatgaaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccctaaattccaatagttctaacttctcttgaat |
211 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
12177282 |
tcatacatggaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccccaaattccaatagttctaacttctcttgaat |
12177381 |
T |
|
| Q |
212 |
caatttttaataatgattcaatgcttgaatagttttcatctagtatgaacaaacatctaagctcattggtatacttttgattcagtttttgggaaactgc |
311 |
Q |
| |
|
| | ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||| |||||||||||||||| ||||||| ||||| |
|
|
| T |
12177382 |
ctacttttaataatgattcaatgcttgaatagttttcatctggtatgaacaagcatctaagttcatttgtatacttttgattcaatttttggaggactgc |
12177481 |
T |
|
| Q |
312 |
tttgatgatgtcatctatcaagtaattttcagtcctaaaatgtaagaatactgataaatg |
371 |
Q |
| |
|
|||||||||||| | ||||||| | |||||||||||||| ||||||||| |||||||| |
|
|
| T |
12177482 |
tttgatgatgtctccaatcaagtcagcttcagtcctaaaatataagaatacagataaatg |
12177541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 12 - 371
Target Start/End: Original strand, 12421610 - 12421969
Alignment:
| Q |
12 |
aagatctttccctagtaacttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaagcaactacct |
111 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12421610 |
aagatcttcccctagtaacttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaagcaactacct |
12421709 |
T |
|
| Q |
112 |
tcatatatgaaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccctaaattccaatagttctaacttctcttgaat |
211 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
12421710 |
tcatacatggaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccccaaattccaatagttctaacttctcttgaat |
12421809 |
T |
|
| Q |
212 |
caatttttaataatgattcaatgcttgaatagttttcatctagtatgaacaaacatctaagctcattggtatacttttgattcagtttttgggaaactgc |
311 |
Q |
| |
|
| | ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||| |||||||||||||||| ||||||| ||||| |
|
|
| T |
12421810 |
ctacttttaataatgattcaatgcttgaatagttttcatctggtatgaacaagcatctaagttcatttgtatacttttgattcaatttttggaggactgc |
12421909 |
T |
|
| Q |
312 |
tttgatgatgtcatctatcaagtaattttcagtcctaaaatgtaagaatactgataaatg |
371 |
Q |
| |
|
|||||||||||| | ||||||| | |||||||||||||| ||||||||| |||||||| |
|
|
| T |
12421910 |
tttgatgatgtctccaatcaagtcagcttcagtcctaaaatataagaatacagataaatg |
12421969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 4 - 293
Target Start/End: Original strand, 6310342 - 6310631
Alignment:
| Q |
4 |
tcaataccaagatctttccctagtaacttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaagc |
103 |
Q |
| |
|
|||||| ||||||||| || |||||||| ||||||||| ||||| |||||||| ||| |||||||||||||||| ||||||| || ||||||| ||||| |
|
|
| T |
6310342 |
tcaatatcaagatcttccctgagtaacttggaaagaagtttgttgcatgtgtaattgatcccatgtctctttgatacttctgttaccttttctaagaagc |
6310441 |
T |
|
| Q |
104 |
aactaccttcatatatgaaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccctaaattccaatagttctaacttc |
203 |
Q |
| |
|
|||| ||||||||| | ||||| ||| | ||||| || |||||||||||||||||||| ||| |||||||||| ||| ||| |||||| || |||||| |
|
|
| T |
6310442 |
aactgccttcatatttaaaagagaccctttgaaacatagcagcagcaagggttgtcttacctgtgcctcccataccccaaagtccaatgatttgaacttc |
6310541 |
T |
|
| Q |
204 |
tcttgaatcaatttttaataatgattcaatgcttgaatagttttcatctagtatgaacaaacatctaagctcattggtatacttttgatt |
293 |
Q |
| |
|
| || |||| ||||| ||| |||| |||||| ||||||||||||| |||||||| |||| ||| ||||| ||||||| |||||| |
|
|
| T |
6310542 |
tgttagatcagattttattaaagattgaatgctccaatagttttcatcaagtatgaaattacatggaagatcatttgtatactgttgatt |
6310631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 4 - 219
Target Start/End: Complemental strand, 32633496 - 32633281
Alignment:
| Q |
4 |
tcaataccaagatctttccctagtaacttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaagc |
103 |
Q |
| |
|
|||||| ||||||||| || ||||||||||||||||||| ||||| || || || ||| ||||| || |||||| ||||||| |||||||||| ||||| |
|
|
| T |
32633496 |
tcaatatcaagatcttcccttagtaacttagaaagaagtttgttgcatatgaaattgattccatgcctttttgatacttctgtcacattttctaagaagc |
32633397 |
T |
|
| Q |
104 |
aactaccttcatatatgaaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccctaaattccaatagttctaacttc |
203 |
Q |
| |
|
|||| |||||||| ||||||| ||| | ||||| | |||||||||||||||||||| |||||||| ||||||||| ||| |||||| || |||||| |
|
|
| T |
32633396 |
aactgccttcatacttgaaagagaccctttgaaacaaagcagcagcaagggttgtcttacctatgccccccatgccccaaagtccaatgatttgaacttc |
32633297 |
T |
|
| Q |
204 |
tcttgaatcaattttt |
219 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
32633296 |
tattgaatcaattttt |
32633281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 5550021 - 5549762
Alignment:
| Q |
1 |
gtgtcaataccaagatctttccctagtaacttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctagga |
100 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||||| ||||| |||||||| ||| ||| | || |||||| ||||||| || ||||| | || |
|
|
| T |
5550021 |
gtgtcaatatcaagatcttcttttagtaacttagaaagaagtttgttgcatgtgtaattgattccacgactttttgatacttctgtaaccttttcaaaga |
5549922 |
T |
|
| Q |
101 |
agcaactaccttcatatatgaaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccctaaattccaatagttctaac |
200 |
Q |
| |
|
||||||| || |||||| ||||||| ||| | ||||| || |||| |||||||||||||| || ||||||||||| ||| ||| |||||| || ||| |
|
|
| T |
5549921 |
agcaactgccatcatatttgaaagagaccctttgaaacatagcagtggcaagggttgtcttaccaatgcctcccataccccaaactccaatgatttgaac |
5549822 |
T |
|
| Q |
201 |
ttctcttgaatcaatttttaataatgattcaatgcttgaatagttttcatctagtatgaa |
260 |
Q |
| |
|
|||| ||||||||| ||||| ||| |||| |||||| |||||||||||| ||||||| |
|
|
| T |
5549821 |
ttctgttgaatcaaattttattaaagattgaatgctccgatagttttcatcaggtatgaa |
5549762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 5607908 - 5608167
Alignment:
| Q |
1 |
gtgtcaataccaagatctttccctagtaacttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctagga |
100 |
Q |
| |
|
||||||||| ||||||||| |||||||||| |||||||| ||||| |||||||| ||| ||||| || |||||| ||||||| || || || | || |
|
|
| T |
5607908 |
gtgtcaatatcaagatcttcttttagtaacttacaaagaagtttgttgcatgtgtaattgattccatgactttttgatacttctgtcaccttctcaaaga |
5608007 |
T |
|
| Q |
101 |
agcaactaccttcatatatgaaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccctaaattccaatagttctaac |
200 |
Q |
| |
|
||||||| || |||||| ||||||| ||| | ||||| || |||| |||||||||||||| |||||||||||||| ||| ||| |||||| || ||| |
|
|
| T |
5608008 |
agcaactgccatcatatttgaaagagaccctttgaaacatagcagtggcaagggttgtcttacctatgcctcccataccccaaagtccaatgatttgaac |
5608107 |
T |
|
| Q |
201 |
ttctcttgaatcaatttttaataatgattcaatgcttgaatagttttcatctagtatgaa |
260 |
Q |
| |
|
|||| |||| |||| ||||| ||| |||| || ||| ||||||||||||| ||||||| |
|
|
| T |
5608108 |
ttctgttgagtcaaattttattaaagattgaacgctccaatagttttcatcaggtatgaa |
5608167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 5627462 - 5627203
Alignment:
| Q |
1 |
gtgtcaataccaagatctttccctagtaacttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctagga |
100 |
Q |
| |
|
||||||||| ||||||||| |||||||||| |||||||| ||||| |||||||| ||| ||||| || |||||| ||||||| || || || | || |
|
|
| T |
5627462 |
gtgtcaatatcaagatcttcttttagtaacttacaaagaagtttgttgcatgtgtaattgattccatgactttttgatacttctgtcaccttctcaaaga |
5627363 |
T |
|
| Q |
101 |
agcaactaccttcatatatgaaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccctaaattccaatagttctaac |
200 |
Q |
| |
|
||||||| || |||||| ||||||| ||| | ||||| || |||| |||||||||||||| |||||||||||||| ||| ||| |||||| || ||| |
|
|
| T |
5627362 |
agcaactgccatcatatttgaaagagaccctttgaaacatagcagtggcaagggttgtcttacctatgcctcccataccccaaagtccaatgatttgaac |
5627263 |
T |
|
| Q |
201 |
ttctcttgaatcaatttttaataatgattcaatgcttgaatagttttcatctagtatgaa |
260 |
Q |
| |
|
|||| |||| |||| ||||| ||| |||| || ||| ||||||||||||| ||||||| |
|
|
| T |
5627262 |
ttctgttgagtcaaattttattaaagattgaacgctccaatagttttcatcaggtatgaa |
5627203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 12178545 - 12178620
Alignment:
| Q |
624 |
aatttgcaaaagtagaagcaaagaaaatacctatatgtacttgaatcgaagccagataaattagctacttcaaaga |
699 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
12178545 |
aatttgtaaaagtagaagcaaagaaaatacctatatgtacttgaatcaaagccagataaattagctacttcaaaga |
12178620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 12190240 - 12190315
Alignment:
| Q |
624 |
aatttgcaaaagtagaagcaaagaaaatacctatatgtacttgaatcgaagccagataaattagctacttcaaaga |
699 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
12190240 |
aatttgcaaaagtagaagcaaagaaaatacctatatgtacttgaatcaaagccagataaattggctacttcaaaga |
12190315 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 12422973 - 12423048
Alignment:
| Q |
624 |
aatttgcaaaagtagaagcaaagaaaatacctatatgtacttgaatcgaagccagataaattagctacttcaaaga |
699 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
12422973 |
aatttgtaaaagtagaagcaaagaaaatacctatatgtacttgaatcaaagccagataaattagctacttcaaaga |
12423048 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 12434668 - 12434743
Alignment:
| Q |
624 |
aatttgcaaaagtagaagcaaagaaaatacctatatgtacttgaatcgaagccagataaattagctacttcaaaga |
699 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
12434668 |
aatttgcaaaagtagaagcaaagaaaatacctatatgtacttgaatcaaagccagataaattggctacttcaaaga |
12434743 |
T |
|
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Target: chr8; HSP #14
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 6 - 260
Target Start/End: Complemental strand, 13165108 - 13164854
Alignment:
| Q |
6 |
aataccaagatctttccctagtaacttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaagcaa |
105 |
Q |
| |
|
|||| |||| |||| |||||||||||| ||||||||| ||||| |||||| | ||| ||||| | | ||||| |||||| |||||||||| ||||||| |
|
|
| T |
13165108 |
aatatcaaggtcttcccctagtaacttggaaagaagtttgttgcatgtgtcattgattccatgcttttctgattgttctgtcacattttctaagaagcaa |
13165009 |
T |
|
| Q |
106 |
ctaccttcatatatga-aagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccctaaattccaatagttctaacttct |
204 |
Q |
| |
|
|||||||| ||| |||| || | ||||| ||||||||||||||||||||||| ||| |||| ||||| ||| ||| |||||| || ||||||| |
|
|
| T |
13165008 |
tggccttcatag-tgagaagagactctttgaaacatggcagcagcaagggttgtcttgcctgtgccccccattccccaaactccaatgatttgaacttct |
13164910 |
T |
|
| Q |
205 |
cttgaatcaatttttaataatgattcaatgcttgaatagttttcatctagtatgaa |
260 |
Q |
| |
|
|||||||||||||| ||| |||| |||||| | || |||||||| |||||||| |
|
|
| T |
13164909 |
gatgaatcaatttttattaaagatttaatgctccagtaattttcatcgagtatgaa |
13164854 |
T |
|
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Target: chr8; HSP #15
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 2 - 257
Target Start/End: Complemental strand, 14404948 - 14404693
Alignment:
| Q |
2 |
tgtcaataccaagatctttccctagtaacttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaa |
101 |
Q |
| |
|
|||||||| ||||||||| || ||||||||| ||||||||| ||||| | | |||| ||| ||||| || || ||| ||||||| || ||||| | || |
|
|
| T |
14404948 |
tgtcaatatcaagatcttcccttagtaacttggaaagaagtttgttgcacgcgtaattgattccatgccttttcgatacttctgtcaccttttcaaacaa |
14404849 |
T |
|
| Q |
102 |
gcaactaccttcatatatgaaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccctaaattccaatagttctaact |
201 |
Q |
| |
|
||| || ||||||||| ||||||| | | | ||||| | || ||||||||||||||| ||| |||||||||| ||| |||||||||| || |||| |
|
|
| T |
14404848 |
gcagctgccttcatatttgaaagagaacctttgaaacagaatagaagcaagggttgtcttacctgtgcctcccataccccaaattccaatgatttgaact |
14404749 |
T |
|
| Q |
202 |
tctcttgaatcaatttttaataatgattcaatgcttgaatagttttcatctagtat |
257 |
Q |
| |
|
| | |||||||| ||||| |||||||| |||||| ||||||||||||| ||||| |
|
|
| T |
14404748 |
tgtgctgaatcaaattttattaatgattgaatgctccaatagttttcatcaagtat |
14404693 |
T |
|
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Target: chr8; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 5571604 - 5571414
Alignment:
| Q |
1 |
gtgtcaataccaagatctttccctagtaacttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctagga |
100 |
Q |
| |
|
|||||||||| |||||||| |||||||||||| ||||||||| ||||| | |||||| ||| ||||| | ||||| ||||||| || |||||| || |
|
|
| T |
5571604 |
gtgtcaatacgaagatcttcccctagtaacttggaaagaagtttgttgcacgtgtaattgattccatgcttttttgaaacttctgtcaccctttctaaga |
5571505 |
T |
|
| Q |
101 |
agcaactaccttcatatatgaaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccctaaattccaat |
191 |
Q |
| |
|
||||| | ||||||||| ||||||| | | | ||||| || ||||||||||| |||||||| || |||||||||| ||| ||| |||||| |
|
|
| T |
5571504 |
agcaattgccttcatatttgaaagagaacctttgaaacatagcagcagcaagagttgtcttaccagtgcctcccattccccaaagtccaat |
5571414 |
T |
|
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Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 6062740 - 6062778
Alignment:
| Q |
153 |
ggttgtctttcctatgcctcccatgccctaaattccaat |
191 |
Q |
| |
|
||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
6062740 |
ggttgtctttcctattcctcccatgccccaaattccaat |
6062778 |
T |
|
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Target: scaffold0363 (Bit Score: 56; Significance: 8e-23; HSPs: 1)
Name: scaffold0363
Description:
Target: scaffold0363; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 2 - 257
Target Start/End: Original strand, 13905 - 14160
Alignment:
| Q |
2 |
tgtcaataccaagatctttccctagtaacttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaa |
101 |
Q |
| |
|
|||||||| ||||||||| || ||||||||| ||||||||| ||||| | | |||| ||| ||||| || || ||| ||||||| || ||||| | || |
|
|
| T |
13905 |
tgtcaatatcaagatcttcccttagtaacttggaaagaagtttgttgcacgcgtaattgattccatgccttttcgatacttctgtcaccttttcaaacaa |
14004 |
T |
|
| Q |
102 |
gcaactaccttcatatatgaaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccctaaattccaatagttctaact |
201 |
Q |
| |
|
||| || ||||||||| ||||||| | | | ||||| | || ||||||||||||||| ||| |||||||||| ||| |||||||||| || |||| |
|
|
| T |
14005 |
gcagctgccttcatatttgaaagagaacctttgaaacagaatagaagcaagggttgtcttacctgtgcctcccataccccaaattccaatgatttgaact |
14104 |
T |
|
| Q |
202 |
tctcttgaatcaatttttaataatgattcaatgcttgaatagttttcatctagtat |
257 |
Q |
| |
|
| | |||||||| ||||| |||||||| |||||| ||||||||||||| ||||| |
|
|
| T |
14105 |
tgtgctgaatcaaattttattaatgattgaatgctccaatagttttcatcaagtat |
14160 |
T |
|
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Target: chr3 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 190
Target Start/End: Original strand, 23455160 - 23455203
Alignment:
| Q |
147 |
agcaagggttgtctttcctatgcctcccatgccctaaattccaa |
190 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| | ||||||| |
|
|
| T |
23455160 |
agcaagggttgtctttcctatgccacccatgccccatattccaa |
23455203 |
T |
|
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