View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2258_1D_low_20 (Length: 283)
Name: NF2258_1D_low_20
Description: NF2258_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2258_1D_low_20 |
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Alignment Details
Target: chr1 (Bit Score: 268; Significance: 1e-150; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 268; E-Value: 1e-150
Query Start/End: Original strand, 10 - 277
Target Start/End: Original strand, 36831105 - 36831372
Alignment:
| Q |
10 |
ggtgttctcatgatccccacggttccaggtcctccacctaaactacaaacaaattcatctgacttggaaatttttcgcgcaagggcttttagccttctat |
109 |
Q |
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| T |
36831105 |
ggtgttctcatgatccccacggttccaggtcctccacctaaactacaaacaaattcatctgacttggaaatttttcgcgcaagggcttttagccttctat |
36831204 |
T |
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| Q |
110 |
caattgttggagtttctggattttgtcaggttgttcctatgtttgtttgtgaaacacttcagactcctatttcttcattatttaagtattgacctttttt |
209 |
Q |
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| T |
36831205 |
caattgttggagtttctggattttgtcaggttgttcctatgtttgtttgtgaaacacttcagactcctatttcttcattatttaagtattgacctttttt |
36831304 |
T |
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| Q |
210 |
ctcacaacactttgcaggtaagcataccactagggatgtataatgatctccctgcatcagtttctctg |
277 |
Q |
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| T |
36831305 |
ctcacaacactttgcaggtaagcataccactagggatgtataatgatctccctgcatcagtttctctg |
36831372 |
T |
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