View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2260_high_3 (Length: 381)

Name: NF2260_high_3
Description: NF2260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2260_high_3
NF2260_high_3
[»] chr1 (74 HSPs)
chr1 (1-374)||(5907824-5908196)
chr1 (250-367)||(5911952-5912069)
chr1 (1-48)||(38448855-38448902)
chr1 (1-47)||(6000133-6000179)
chr1 (1-44)||(11681248-11681291)
chr1 (1-48)||(19620601-19620648)
chr1 (1-48)||(21638138-21638185)
chr1 (1-40)||(25532998-25533037)
chr1 (1-48)||(34521179-34521226)
chr1 (1-48)||(50638905-50638952)
chr1 (1-47)||(127099-127145)
chr1 (2-48)||(3481587-3481633)
chr1 (1-47)||(8736460-8736506)
chr1 (1-39)||(12268982-12269020)
chr1 (1-39)||(32560998-32561036)
chr1 (1-47)||(41973280-41973326)
chr1 (1-47)||(44641552-44641598)
chr1 (1-47)||(44678007-44678053)
chr1 (2-47)||(34595898-34595943)
chr1 (2-47)||(49431983-49432028)
chr1 (1-32)||(4968620-4968651)
chr1 (1-48)||(9413823-9413870)
chr1 (1-40)||(14880853-14880892)
chr1 (1-48)||(17139506-17139553)
chr1 (2-37)||(22346702-22346737)
chr1 (1-48)||(23405347-23405394)
chr1 (9-48)||(23730368-23730407)
chr1 (1-48)||(27533268-27533315)
chr1 (1-48)||(37045135-37045182)
chr1 (1-36)||(40613048-40613083)
chr1 (1-48)||(42045361-42045408)
chr1 (1-48)||(47071947-47071994)
chr1 (1-48)||(47528436-47528483)
chr1 (1-39)||(2994783-2994821)
chr1 (1-39)||(4302477-4302515)
chr1 (3-37)||(7610169-7610203)
chr1 (1-39)||(8269366-8269404)
chr1 (1-47)||(9639807-9639853)
chr1 (1-47)||(16033440-16033486)
chr1 (1-47)||(17283976-17284022)
chr1 (1-39)||(18166627-18166665)
chr1 (8-46)||(19795107-19795145)
chr1 (1-39)||(28832169-28832207)
chr1 (1-35)||(30521892-30521926)
chr1 (1-47)||(33153870-33153916)
chr1 (1-47)||(34632194-34632240)
chr1 (2-48)||(35473978-35474024)
chr1 (2-40)||(41763152-41763190)
chr1 (1-31)||(45481518-45481548)
chr1 (2-48)||(46392259-46392305)
chr1 (2-48)||(47719096-47719142)
chr1 (1-34)||(1605421-1605454)
chr1 (1-34)||(1794621-1794654)
chr1 (1-34)||(2596943-2596976)
chr1 (10-47)||(6423751-6423788)
chr1 (1-34)||(10654450-10654483)
chr1 (2-39)||(12212321-12212358)
chr1 (1-34)||(15668523-15668556)
chr1 (1-46)||(22335383-22335428)
chr1 (1-34)||(26755641-26755674)
chr1 (1-34)||(26803454-26803487)
chr1 (2-39)||(29042563-29042600)
chr1 (1-34)||(29739362-29739395)
chr1 (1-34)||(32950764-32950797)
chr1 (1-34)||(36679615-36679648)
chr1 (1-34)||(39252149-39252182)
chr1 (1-34)||(45003425-45003458)
chr1 (1-34)||(46707897-46707930)
chr1 (1-34)||(49222841-49222874)
chr1 (6-34)||(3937525-3937553)
chr1 (2-34)||(10356717-10356749)
chr1 (4-48)||(24529713-24529757)
chr1 (2-34)||(41769818-41769850)
chr1 (1-48)||(46040560-46040608)
[»] chr4 (80 HSPs)
chr4 (2-48)||(54294411-54294457)
chr4 (1-47)||(49041971-49042017)
chr4 (1-48)||(20799383-20799430)
chr4 (1-48)||(54857604-54857651)
chr4 (1-48)||(56497597-56497644)
chr4 (1-47)||(3936652-3936698)
chr4 (1-47)||(7230305-7230351)
chr4 (5-47)||(11198357-11198399)
chr4 (1-39)||(11949761-11949799)
chr4 (1-39)||(19479475-19479513)
chr4 (1-47)||(25978342-25978388)
chr4 (1-47)||(56551582-56551628)
chr4 (1-46)||(281616-281661)
chr4 (1-34)||(675943-675976)
chr4 (1-46)||(7371539-7371584)
chr4 (1-38)||(16737096-16737133)
chr4 (1-34)||(17423180-17423213)
chr4 (1-34)||(20383513-20383546)
chr4 (1-34)||(25783452-25783485)
chr4 (2-39)||(44815967-44816004)
chr4 (1-34)||(49953406-49953439)
chr4 (6-46)||(19314197-19314237)
chr4 (1-45)||(49952663-49952707)
chr4 (1-48)||(9946452-9946499)
chr4 (1-48)||(11144654-11144701)
chr4 (1-48)||(28435237-28435284)
chr4 (1-48)||(34833995-34834042)
chr4 (1-40)||(37921771-37921810)
chr4 (4-47)||(42316814-42316857)
chr4 (1-48)||(43034331-43034378)
chr4 (1-48)||(46676487-46676534)
chr4 (1-48)||(47806245-47806292)
chr4 (1-40)||(48226495-48226534)
chr4 (1-48)||(55061062-55061109)
chr4 (2-48)||(2034084-2034130)
chr4 (2-48)||(3580740-3580786)
chr4 (1-47)||(8495012-8495058)
chr4 (1-47)||(10006365-10006411)
chr4 (1-47)||(10261759-10261805)
chr4 (10-48)||(11314646-11314684)
chr4 (1-47)||(19588179-19588225)
chr4 (1-47)||(19854590-19854636)
chr4 (1-39)||(21114303-21114341)
chr4 (1-47)||(21562650-21562696)
chr4 (1-47)||(26926700-26926746)
chr4 (9-47)||(32139373-32139411)
chr4 (1-47)||(35287497-35287543)
chr4 (1-39)||(36490593-36490631)
chr4 (1-47)||(38374982-38375028)
chr4 (1-47)||(39974527-39974573)
chr4 (1-47)||(43330171-43330217)
chr4 (6-40)||(47814248-47814282)
chr4 (1-47)||(48283317-48283363)
chr4 (1-31)||(49473670-49473700)
chr4 (1-47)||(51450237-51450283)
chr4 (2-47)||(2888900-2888945)
chr4 (6-47)||(10035295-10035336)
chr4 (1-34)||(12322698-12322731)
chr4 (2-39)||(14202477-14202514)
chr4 (1-34)||(16304101-16304134)
chr4 (1-34)||(21317341-21317374)
chr4 (1-34)||(22040675-22040708)
chr4 (2-31)||(24664997-24665026)
chr4 (1-34)||(29908081-29908114)
chr4 (1-34)||(34042265-34042298)
chr4 (1-34)||(37193274-37193307)
chr4 (1-30)||(42845050-42845079)
chr4 (1-34)||(43722790-43722823)
chr4 (1-34)||(48226717-48226750)
chr4 (1-34)||(49952572-49952605)
chr4 (3-40)||(50152235-50152272)
chr4 (1-34)||(50362142-50362175)
chr4 (2-39)||(53190321-53190358)
chr4 (1-34)||(54500594-54500627)
chr4 (2-34)||(6087773-6087805)
chr4 (1-48)||(34264705-34264753)
chr4 (2-34)||(36035860-36035892)
chr4 (1-45)||(42139869-42139913)
chr4 (2-46)||(43027318-43027362)
chr4 (7-47)||(51298686-51298726)
[»] chr2 (68 HSPs)
chr2 (1-47)||(20120711-20120757)
chr2 (1-48)||(29544652-29544699)
chr2 (1-47)||(20455916-20455962)
chr2 (2-48)||(27848184-27848230)
chr2 (3-48)||(10735820-10735865)
chr2 (1-48)||(24592835-24592882)
chr2 (1-48)||(36474787-36474834)
chr2 (1-48)||(41778933-41778980)
chr2 (1-40)||(42791320-42791359)
chr2 (1-47)||(20200730-20200776)
chr2 (1-47)||(25186232-25186278)
chr2 (2-48)||(31476997-31477043)
chr2 (1-39)||(31815885-31815923)
chr2 (1-34)||(8091161-8091194)
chr2 (1-34)||(20565078-20565111)
chr2 (1-34)||(36359339-36359372)
chr2 (1-48)||(7052798-7052846)
chr2 (4-48)||(27411120-27411164)
chr2 (2-34)||(31543038-31543070)
chr2 (1-48)||(4056815-4056862)
chr2 (1-40)||(4122010-4122049)
chr2 (1-40)||(6579278-6579317)
chr2 (1-36)||(22571866-22571901)
chr2 (1-40)||(22709110-22709149)
chr2 (1-48)||(24593401-24593448)
chr2 (1-48)||(28771607-28771654)
chr2 (1-48)||(35820290-35820337)
chr2 (1-48)||(44810730-44810777)
chr2 (1-39)||(660820-660858)
chr2 (1-47)||(2256996-2257042)
chr2 (1-39)||(3113725-3113763)
chr2 (1-47)||(3708718-3708764)
chr2 (1-39)||(8781648-8781686)
chr2 (1-47)||(11868652-11868698)
chr2 (1-31)||(12124570-12124600)
chr2 (1-47)||(12413518-12413564)
chr2 (1-47)||(12425578-12425624)
chr2 (1-47)||(17842702-17842748)
chr2 (1-47)||(21258641-21258687)
chr2 (1-47)||(22523002-22523048)
chr2 (1-39)||(23250318-23250356)
chr2 (1-47)||(24393270-24393316)
chr2 (2-48)||(27152379-27152425)
chr2 (1-39)||(29734716-29734754)
chr2 (1-47)||(29809351-29809397)
chr2 (1-47)||(35360045-35360091)
chr2 (2-39)||(4180723-4180760)
chr2 (2-39)||(5168577-5168614)
chr2 (1-46)||(9718419-9718464)
chr2 (2-47)||(10723965-10724010)
chr2 (3-48)||(16390630-16390675)
chr2 (2-47)||(22607178-22607223)
chr2 (1-34)||(23407021-23407054)
chr2 (1-34)||(24579671-24579704)
chr2 (1-34)||(30089074-30089107)
chr2 (1-34)||(30125678-30125711)
chr2 (1-34)||(32458327-32458360)
chr2 (1-46)||(34977229-34977274)
chr2 (1-46)||(41859877-41859922)
chr2 (1-34)||(43043168-43043201)
chr2 (1-46)||(44526153-44526198)
chr2 (1-33)||(7537135-7537167)
chr2 (3-47)||(15447704-15447748)
chr2 (4-48)||(20017045-20017089)
chr2 (1-33)||(25612297-25612329)
chr2 (2-34)||(29599965-29599997)
chr2 (2-34)||(30978388-30978420)
chr2 (3-39)||(40853816-40853852)
[»] chr8 (56 HSPs)
chr8 (3-48)||(30176408-30176453)
chr8 (1-48)||(12748926-12748973)
chr8 (1-48)||(32051521-32051568)
chr8 (1-48)||(19260568-19260615)
chr8 (1-48)||(19778090-19778137)
chr8 (1-48)||(24838159-24838206)
chr8 (1-48)||(27587246-27587293)
chr8 (1-47)||(444438-444484)
chr8 (1-47)||(8881300-8881346)
chr8 (1-34)||(33105416-33105449)
chr8 (1-37)||(12714370-12714406)
chr8 (1-36)||(6447214-6447249)
chr8 (1-48)||(6471536-6471583)
chr8 (1-48)||(12800889-12800936)
chr8 (1-40)||(13124360-13124399)
chr8 (1-48)||(22775653-22775700)
chr8 (1-48)||(29924906-29924953)
chr8 (1-48)||(31832079-31832126)
chr8 (1-40)||(33482146-33482185)
chr8 (1-48)||(44975203-44975250)
chr8 (1-47)||(1244695-1244741)
chr8 (1-43)||(1877656-1877698)
chr8 (1-39)||(4830033-4830071)
chr8 (1-47)||(7553704-7553750)
chr8 (1-47)||(7968931-7968976)
chr8 (1-47)||(16869551-16869597)
chr8 (2-44)||(18942944-18942986)
chr8 (1-39)||(19163534-19163572)
chr8 (1-47)||(19488325-19488371)
chr8 (1-47)||(20665353-20665399)
chr8 (1-35)||(22948083-22948117)
chr8 (1-39)||(24023413-24023451)
chr8 (1-39)||(27571847-27571885)
chr8 (1-47)||(30550716-30550762)
chr8 (1-47)||(37141382-37141428)
chr8 (1-47)||(40795402-40795448)
chr8 (1-47)||(42208459-42208505)
chr8 (1-47)||(44215465-44215511)
chr8 (2-47)||(3650546-3650591)
chr8 (2-47)||(7839108-7839153)
chr8 (1-34)||(8717478-8717511)
chr8 (1-34)||(10871897-10871930)
chr8 (1-30)||(11053001-11053030)
chr8 (6-39)||(15147027-15147060)
chr8 (1-30)||(15438478-15438507)
chr8 (1-30)||(15529782-15529811)
chr8 (1-34)||(18533694-18533727)
chr8 (1-34)||(24195274-24195307)
chr8 (1-34)||(27718897-27718930)
chr8 (2-39)||(37938521-37938558)
chr8 (1-34)||(39821909-39821942)
chr8 (1-34)||(44794918-44794951)
chr8 (1-37)||(4263840-4263876)
chr8 (3-47)||(6235541-6235585)
chr8 (3-39)||(26773800-26773836)
chr8 (4-48)||(32286353-32286397)
[»] chr5 (54 HSPs)
chr5 (2-47)||(27679524-27679569)
chr5 (1-48)||(3445236-3445283)
chr5 (1-48)||(22522790-22522837)
chr5 (1-48)||(32339760-32339807)
chr5 (1-47)||(40715939-40715985)
chr5 (1-48)||(6489032-6489079)
chr5 (1-48)||(6624801-6624848)
chr5 (1-47)||(35109425-35109471)
chr5 (1-46)||(5846054-5846099)
chr5 (2-39)||(21139146-21139183)
chr5 (1-34)||(42473919-42473952)
chr5 (1-33)||(32200451-32200483)
chr5 (2-45)||(11017202-11017245)
chr5 (1-48)||(11720919-11720965)
chr5 (4-47)||(26223592-26223635)
chr5 (1-48)||(26655489-26655536)
chr5 (1-48)||(26927074-26927121)
chr5 (1-48)||(31708135-31708182)
chr5 (9-48)||(31958457-31958496)
chr5 (1-48)||(32559329-32559376)
chr5 (1-40)||(34191458-34191497)
chr5 (1-48)||(34436876-34436923)
chr5 (1-48)||(43396879-43396926)
chr5 (1-39)||(13864369-13864407)
chr5 (5-47)||(14474863-14474905)
chr5 (1-47)||(18331732-18331778)
chr5 (1-39)||(20721075-20721113)
chr5 (4-46)||(25603991-25604033)
chr5 (1-47)||(28207157-28207203)
chr5 (1-47)||(28604408-28604454)
chr5 (1-47)||(34702515-34702561)
chr5 (1-47)||(37462136-37462182)
chr5 (1-31)||(37932355-37932385)
chr5 (1-47)||(41630102-41630148)
chr5 (2-48)||(42005131-42005177)
chr5 (1-47)||(43135184-43135229)
chr5 (1-34)||(4763189-4763222)
chr5 (1-34)||(6424906-6424939)
chr5 (1-34)||(10704334-10704367)
chr5 (1-34)||(16579377-16579410)
chr5 (2-47)||(17090892-17090937)
chr5 (1-30)||(18589874-18589903)
chr5 (2-47)||(18872693-18872738)
chr5 (1-34)||(20688065-20688098)
chr5 (1-34)||(25979869-25979902)
chr5 (1-34)||(27903138-27903171)
chr5 (1-30)||(33928664-33928693)
chr5 (1-46)||(42708000-42708045)
chr5 (1-34)||(42817115-42817148)
chr5 (6-46)||(1476101-1476141)
chr5 (8-48)||(4009899-4009939)
chr5 (2-34)||(12670077-12670109)
chr5 (3-39)||(24408522-24408558)
chr5 (1-45)||(27545149-27545193)
[»] chr7 (63 HSPs)
chr7 (1-48)||(18714473-18714520)
chr7 (1-48)||(46987111-46987158)
chr7 (1-47)||(27462426-27462472)
chr7 (1-48)||(19416539-19416586)
chr7 (1-48)||(45425478-45425525)
chr7 (1-48)||(47155093-47155140)
chr7 (1-47)||(10244752-10244797)
chr7 (1-39)||(19599170-19599208)
chr7 (1-47)||(37624568-37624614)
chr7 (1-47)||(48527215-48527261)
chr7 (1-34)||(7670459-7670492)
chr7 (1-34)||(19626528-19626561)
chr7 (1-34)||(20085762-20085795)
chr7 (1-34)||(39280821-39280854)
chr7 (1-34)||(46737810-46737843)
chr7 (1-36)||(1079693-1079728)
chr7 (1-36)||(2618704-2618739)
chr7 (1-48)||(7872737-7872784)
chr7 (1-48)||(8084452-8084499)
chr7 (1-48)||(27833390-27833437)
chr7 (3-34)||(42095946-42095977)
chr7 (1-47)||(3830093-3830139)
chr7 (1-39)||(14671195-14671233)
chr7 (1-47)||(20763179-20763225)
chr7 (2-48)||(21322201-21322247)
chr7 (1-47)||(22777350-22777395)
chr7 (1-47)||(25288689-25288735)
chr7 (1-47)||(29488745-29488791)
chr7 (1-47)||(33232387-33232433)
chr7 (1-47)||(34284529-34284575)
chr7 (1-39)||(41029297-41029335)
chr7 (4-34)||(42753530-42753560)
chr7 (1-47)||(42829224-42829270)
chr7 (1-39)||(48629063-48629101)
chr7 (1-34)||(5041364-5041397)
chr7 (1-38)||(5963826-5963863)
chr7 (1-46)||(6768698-6768743)
chr7 (2-39)||(10242506-10242543)
chr7 (2-47)||(14046601-14046646)
chr7 (2-47)||(14356631-14356676)
chr7 (2-47)||(16198409-16198454)
chr7 (1-34)||(18023704-18023737)
chr7 (2-47)||(22690026-22690071)
chr7 (7-40)||(23147321-23147354)
chr7 (2-47)||(26009302-26009347)
chr7 (2-47)||(26973774-26973819)
chr7 (2-47)||(34000288-34000333)
chr7 (3-40)||(36121679-36121716)
chr7 (2-35)||(37230030-37230063)
chr7 (2-39)||(37495916-37495953)
chr7 (1-34)||(40867055-40867088)
chr7 (1-34)||(43539107-43539140)
chr7 (1-34)||(47342437-47342470)
chr7 (8-48)||(145550-145590)
chr7 (3-31)||(394366-394394)
chr7 (2-46)||(2962717-2962761)
chr7 (4-48)||(5579721-5579765)
chr7 (1-41)||(6781832-6781872)
chr7 (1-48)||(20243280-20243328)
chr7 (2-34)||(26717931-26717963)
chr7 (6-34)||(45046218-45046246)
chr7 (2-34)||(46371007-46371039)
chr7 (7-43)||(46418522-46418558)
[»] chr3 (60 HSPs)
chr3 (1-48)||(25727956-25728003)
chr3 (1-48)||(38130948-38130995)
chr3 (1-47)||(48849753-48849799)
chr3 (2-39)||(48315022-48315059)
chr3 (1-37)||(40575609-40575645)
chr3 (1-48)||(4601869-4601916)
chr3 (1-48)||(16792963-16793010)
chr3 (1-48)||(25340913-25340960)
chr3 (1-48)||(45334214-45334261)
chr3 (1-47)||(25441490-25441536)
chr3 (1-47)||(28130924-28130970)
chr3 (1-47)||(32909291-32909337)
chr3 (1-39)||(34899122-34899160)
chr3 (1-47)||(45431973-45432019)
chr3 (1-47)||(53996324-53996370)
chr3 (2-48)||(55066589-55066635)
chr3 (2-47)||(334837-334882)
chr3 (1-34)||(913603-913636)
chr3 (2-47)||(14771357-14771402)
chr3 (1-46)||(19468476-19468521)
chr3 (2-43)||(35126263-35126304)
chr3 (2-47)||(37920988-37921033)
chr3 (1-34)||(41817524-41817557)
chr3 (1-34)||(48656902-48656935)
chr3 (2-47)||(51614235-51614280)
chr3 (1-37)||(977941-977977)
chr3 (2-34)||(16663239-16663271)
chr3 (2-38)||(47099034-47099070)
chr3 (12-48)||(53365940-53365976)
chr3 (1-48)||(10926494-10926541)
chr3 (1-48)||(11358259-11358306)
chr3 (1-48)||(25505691-25505737)
chr3 (1-48)||(29631211-29631258)
chr3 (1-47)||(916464-916510)
chr3 (1-39)||(7464489-7464527)
chr3 (1-47)||(8075810-8075856)
chr3 (1-47)||(8113552-8113598)
chr3 (1-47)||(8238589-8238635)
chr3 (1-39)||(10922306-10922344)
chr3 (1-43)||(14160272-14160314)
chr3 (3-48)||(20906469-20906515)
chr3 (2-48)||(22251449-22251495)
chr3 (1-31)||(28266741-28266771)
chr3 (1-47)||(32843252-32843298)
chr3 (1-47)||(44075146-44075192)
chr3 (1-47)||(48796208-48796254)
chr3 (1-47)||(51882190-51882236)
chr3 (1-34)||(7626464-7626497)
chr3 (1-46)||(28965768-28965813)
chr3 (1-34)||(39779049-39779082)
chr3 (1-46)||(46226016-46226061)
chr3 (1-34)||(49975808-49975841)
chr3 (1-46)||(52119401-52119446)
chr3 (2-34)||(4332670-4332702)
chr3 (1-33)||(7738694-7738726)
chr3 (1-45)||(8747228-8747272)
chr3 (4-44)||(17218519-17218559)
chr3 (1-45)||(35191809-35191853)
chr3 (2-34)||(35347298-35347330)
chr3 (7-39)||(38798891-38798923)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-47)||(75350-75396)
[»] chr6 (45 HSPs)
chr6 (1-47)||(8569734-8569780)
chr6 (2-47)||(12184534-12184579)
chr6 (1-36)||(12215778-12215813)
chr6 (1-48)||(16204779-16204826)
chr6 (1-47)||(2726407-2726453)
chr6 (1-47)||(4450287-4450333)
chr6 (1-47)||(29740507-29740553)
chr6 (3-48)||(10496961-10497005)
chr6 (1-34)||(33824906-33824939)
chr6 (3-34)||(291394-291425)
chr6 (1-40)||(655746-655785)
chr6 (1-48)||(9333756-9333803)
chr6 (1-48)||(14049873-14049920)
chr6 (1-48)||(21847219-21847266)
chr6 (1-32)||(28231430-28231461)
chr6 (1-48)||(28758279-28758326)
chr6 (1-40)||(33976269-33976308)
chr6 (1-47)||(247684-247730)
chr6 (1-47)||(8916464-8916510)
chr6 (1-31)||(9111072-9111102)
chr6 (1-39)||(13496141-13496179)
chr6 (6-40)||(14429125-14429159)
chr6 (1-39)||(15187088-15187126)
chr6 (1-39)||(15473480-15473518)
chr6 (1-39)||(20744163-20744201)
chr6 (1-47)||(24373700-24373746)
chr6 (1-47)||(26587417-26587463)
chr6 (2-48)||(27907940-27907986)
chr6 (1-47)||(32193849-32193895)
chr6 (1-39)||(34481412-34481450)
chr6 (1-34)||(8629699-8629732)
chr6 (1-34)||(8637440-8637473)
chr6 (2-47)||(14750149-14750193)
chr6 (1-34)||(15155760-15155793)
chr6 (1-34)||(16390454-16390487)
chr6 (1-34)||(18253342-18253375)
chr6 (1-34)||(19265527-19265560)
chr6 (2-35)||(21029368-21029401)
chr6 (1-34)||(26356084-26356117)
chr6 (1-34)||(31971554-31971587)
chr6 (2-34)||(8639072-8639104)
chr6 (1-33)||(8831232-8831264)
chr6 (2-34)||(9977083-9977115)
chr6 (1-45)||(28898881-28898925)
chr6 (2-46)||(30639417-30639461)
[»] scaffold0040 (1 HSPs)
scaffold0040 (4-47)||(53767-53810)
[»] scaffold1619 (1 HSPs)
scaffold1619 (1-47)||(1056-1102)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-47)||(17529-17575)
[»] scaffold1127 (1 HSPs)
scaffold1127 (1-34)||(1168-1201)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-46)||(37560-37605)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-46)||(48672-48717)
[»] scaffold0238 (1 HSPs)
scaffold0238 (1-48)||(25414-25461)
[»] scaffold0143 (1 HSPs)
scaffold0143 (1-40)||(4491-4530)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-32)||(31927-31958)
[»] scaffold0524 (1 HSPs)
scaffold0524 (1-46)||(1259-1304)
[»] scaffold0168 (1 HSPs)
scaffold0168 (2-47)||(9429-9474)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-34)||(42337-42370)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-34)||(72778-72811)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-34)||(99062-99095)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-46)||(185288-185333)


Alignment Details
Target: chr1 (Bit Score: 290; Significance: 1e-163; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 1 - 374
Target Start/End: Original strand, 5907824 - 5908196
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccaccnnnnnnnncgtatgtcattaatcattacatttctttacccaaaacaaaattt 100  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  5907824 caatgcataatatatgcaaggtccagggttcaaaccccggacaccaccaaaaaaaacgtatgtcattaatcattacatttctttacccaaaacaaaattt 5907923  T
Q  101 tattgaatcaaagttcaactattcaaagataaataatctacatgaaaagctcttcacatgaatgtctctatatcatatgaaaggcataacatatatggaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5907924 tattgaatcaaagttcaactattcaaagataaataatctacatgaaaagctcttcacatgaatgtctctatatcatatgaaaggcataacatataaggaa 5908023  T
Q  201 attaaggaaaacgagaaacaaataaagcaaaagaagaagnnnnnnnnntgaagttgtataagcatttaatccatcaaatgagagtcagaatttctaggat 300  Q
    |||||||||||||||||||||||||||||||||||||||         ||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5908024 attaaggaaaacgagaaacaaataaagcaaaagaagaag-aaaaaaaatgttgttgtataaacatttaatccatcaaatgagagtcagaatttctaggat 5908122  T
Q  301 caatgactttaaccttccattgataatcaagtgatcccatgttactagatcttctcctttcccaattcatctca 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5908123 caatgactttaaccttccattgataatcaagtgatcccatgttactagatcttctcctttcccaattcaactca 5908196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 250 - 367
Target Start/End: Original strand, 5911952 - 5912069
Alignment:
Q  250 gaagttgtataagcatttaatccatcaaatgagagtcagaatttctaggatcaatgactttaaccttccattgataatcaagtgatcccatgttactaga 349  Q
    ||||||||||||  || |||||||||||| ||||  |||| |||||||||||  |||| |||| | |||| |||||||||||||||||||| ||| ||||    
T  5911952 gaagttgtataataatctaatccatcaaaagagatccagattttctaggatctgtgacattaatcctccaatgataatcaagtgatcccatcttattaga 5912051  T
Q  350 tcttctcctttcccaatt 367  Q
    ||||||||||||||||||    
T  5912052 tcttctcctttcccaatt 5912069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 38448902 - 38448855
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38448902 caatgcataatatatgcaaggtccggggttcgaatcccggacaccacc 38448855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6000179 - 6000133
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||    
T  6000179 caatgcataatatatgcaaggtccgaggttcaaaccccggacaccac 6000133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11681248 - 11681291
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacac 44  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  11681248 caatgcataatatatgcaaggtctggggttcaaaccccggacac 11681291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 19620601 - 19620648
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||| |||||||||||||||||||||||||||||||  ||||||||||    
T  19620601 caatacataatatatgcaaggtccggggttcaaatcttggacaccacc 19620648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 21638138 - 21638185
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||| |||||||||||||||||||||| || |||||||||||||    
T  21638138 caatgcatgatatatgcaaggtccggggttcgaaccccggacaccacc 21638185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 25532998 - 25533037
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccgg 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  25532998 caatgcataatatatgcaaggtccggggttcaaaccccgg 25533037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 34521226 - 34521179
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||||||||||||||| | ||| |||||||    
T  34521226 caatgcataatatatgcaaggtccggggttcaaacctcggccaccacc 34521179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 50638952 - 50638905
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||||| |||||| |||||||| |||||||    
T  50638952 caatgcataatatatgcaaggtccagggttcgaatcccggccaccacc 50638905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 127099 - 127145
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||| ||||||||||||||||||||| ||||||||| ||||||    
T  127099 caatgcattatatatgcaaggtccggggtttaaatcccggccaccac 127145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 3481587 - 3481633
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||    
T  3481587 aatgcataatatatgcaaggtctggggttcaaaccccggccaccacc 3481633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8736460 - 8736506
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||||||||||| ||||| ||||||    
T  8736460 caatgcataaaatatgcaaggtccggggttcaaaccccggccaccac 8736506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12269020 - 12268982
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  12269020 caatgcataatatatgcaaggtccggggttcaaaccccg 12268982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32560998 - 32561036
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  32560998 caatgtataatatatgcaaggtccggggttcaaatcccg 32561036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 41973280 - 41973326
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||||||||||| || ||||| ||||||    
T  41973280 caatgcataatatatgcaaggtccggggttcgaaccccggccaccac 41973326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44641552 - 44641598
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||| ||||||||||||||| || ||||||    
T  44641552 caatgcataatatatgcaaggcccggggttcaaatcctggccaccac 44641598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44678053 - 44678007
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||| |||||||||||||| || ||||||    
T  44678053 caatgcataatatatgcaaggttcggggttcaaatcctggtcaccac 44678007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 34595898 - 34595943
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||||||||||||| | ||| ||||||    
T  34595898 aatgcataatatatgcaaggtccggggttcaaacctcggccaccac 34595943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 49432028 - 49431983
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||| ||||||||||||||||| ||||| ||||||    
T  49432028 aatgcataatatatgtaaggtccggggttcaaaccccggccaccac 49431983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 4968651 - 4968620
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttca 32  Q
    ||||||||||||||||||||||||||||||||    
T  4968651 caatgcataatatatgcaaggtccggggttca 4968620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 9413823 - 9413870
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||| ||||| |||||||| |||||||||| |||||    
T  9413823 caatgcataatatatgtaaggttcggggttcgaatcccggacgccacc 9413870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 14880853 - 14880892
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccgg 40  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  14880853 caatgcataatatatgcaaggtctgaggttcaaatcccgg 14880892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17139553 - 17139506
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||| |||||||||||||||||| ||||  |||||||    
T  17139553 caatgcataatatattcaaggtccggggttcaaaccccgaccaccacc 17139506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 22346702 - 22346737
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcc 37  Q
    ||||||||| ||||||||||||||||||||||||||    
T  22346702 aatgcataaaatatgcaaggtccggggttcaaatcc 22346737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23405394 - 23405347
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||||| |||||| |||||||  |||||||    
T  23405394 caatgcataatatatgcaaggtccagggttcgaatcccgaccaccacc 23405347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 23730407 - 23730368
Alignment:
Q  9 aatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  23730407 aatatatgcaaggtccggggttcgaaccccggacaccacc 23730368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 27533268 - 27533315
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||| ||||||||||| ||||  |||||||    
T  27533268 caatgcataatatatgcaaggttcggggttcaaaccccgaccaccacc 27533315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 37045182 - 37045135
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||||| |||||| || ||| |||||||||    
T  37045182 caatgcataatatatgcaaggtccagggttcgaaccccagacaccacc 37045135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 40613048 - 40613083
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatc 36  Q
    ||||||||||||||||||||||||||||||| ||||    
T  40613048 caatgcataatatatgcaaggtccggggttcgaatc 40613083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 42045408 - 42045361
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||| || ||||||| ||||| |||||||    
T  42045408 caatgcataatatatgcaaggtctggagttcaaaccccggccaccacc 42045361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 47071994 - 47071947
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||| |||||||||||||||||||||| ||||||||| ||||| ||||    
T  47071994 caatacataatatatgcaaggtccgggattcaaatcctggacaacacc 47071947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 47528483 - 47528436
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||| |||||||||| ||||| || |||||||||||||    
T  47528483 caatgcataatatacgcaaggtccgaggttcgaaccccggacaccacc 47528436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2994783 - 2994821
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||| |||||||||||||||||||||||||||| ||||    
T  2994783 caatgtataatatatgcaaggtccggggttcaaaccccg 2994821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4302477 - 4302515
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  4302477 caatgcataatatatgcaagatccggagttcaaatcccg 4302515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 7610203 - 7610169
Alignment:
Q  3 atgcataatatatgcaaggtccggggttcaaatcc 37  Q
    ||||||||||||||||||||| |||||||||||||    
T  7610203 atgcataatatatgcaaggtctggggttcaaatcc 7610169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8269404 - 8269366
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  8269404 caatacataatatatgcaaggtccggggttcaaaccccg 8269366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9639853 - 9639807
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||||||| |||| || | ||||||||||    
T  9639853 caatgcataatatatgcaaggtccggagttcgaacctcggacaccac 9639807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16033486 - 16033440
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||| ||||||||||  |||| ||||||    
T  16033486 caatgcataatatatgcaaggtctggggttcaaactccggccaccac 16033440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17283976 - 17284022
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||||| |||||| || || |||||||||    
T  17283976 caatgcataatatatgcaaggtccagggttcgaaccctggacaccac 17284022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18166627 - 18166665
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  18166627 caatgcataatatatgcaaagtccggggttcaaaccccg 18166665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 19795145 - 19795107
Alignment:
Q  8 taatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  19795145 taatatatgcaaggtccggggttcaaaccccggccacca 19795107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28832207 - 28832169
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  28832207 caatgcataatatatgcaaggtctgaggttcaaatcccg 28832169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 30521892 - 30521926
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaat 35  Q
    ||||||||||||||||||||||||||| |||||||    
T  30521892 caatgcataatatatgcaaggtccgggattcaaat 30521926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33153916 - 33153870
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||| |||||||| |||||||| |||| |||||||    
T  33153916 caatgcataatatatgtaaggtccgaggttcaaaccccgaacaccac 33153870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34632194 - 34632240
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||| |||||||||||||| |||| |||||||||||||| ||||||    
T  34632194 caatgtataatatatgcaagatccgaggttcaaatcccggccaccac 34632240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 35473978 - 35474024
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||    
T  35473978 aatgcataatatatgcaaggttcagggttcgaaccccggacaccacc 35474024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 41763190 - 41763152
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccgg 40  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  41763190 aatgcataaaatatgcaaggtccggggttcaaaccccgg 41763152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 45481518 - 45481548
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttc 31  Q
    |||||||||||||||||||||||||||||||    
T  45481518 caatgcataatatatgcaaggtccggggttc 45481548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 46392259 - 46392305
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||| ||||||||||||||||||| |||  |||||||    
T  46392259 aatgcataatatatccaaggtccggggttcaaattccgaccaccacc 46392305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 47719142 - 47719096
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||| ||| |||| |||||||| |||||||    
T  47719142 aatgcataatatatgcaaggttcggagttcgaatcccggccaccacc 47719096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 1605421 - 1605454
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||| |||||||||||||||||||||||    
T  1605421 caatgcataaaatatgcaaggtccggggttcaaa 1605454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 1794621 - 1794654
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||| |||||||||||||    
T  1794621 caatgcataatatatgcaagatccggggttcaaa 1794654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 2596976 - 2596943
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||| |||||||||||||||||||||||    
T  2596976 caatgcataaaatatgcaaggtccggggttcaaa 2596943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 6423788 - 6423751
Alignment:
Q  10 atatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  6423788 atatatgcaaggtccggggttcaaaccccggccaccac 6423751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 10654483 - 10654450
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||| ||||||||    
T  10654483 caatgcataatatatgcaaggtccgtggttcaaa 10654450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 12212321 - 12212358
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  12212321 aatgcataatatatgcaacgtccggggttcaaaccccg 12212358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 15668523 - 15668556
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||| |||||||||||||||||||||||    
T  15668523 caatgcataaaatatgcaaggtccggggttcaaa 15668556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22335383 - 22335428
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    ||||||||||||||||||||||| | |||||||| |||| ||||||    
T  22335383 caatgcataatatatgcaaggtctgaggttcaaaccccgaacacca 22335428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 26755641 - 26755674
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||| |||||||||||||||||||||||||    
T  26755641 caatgcattatatatgcaaggtccggggttcaaa 26755674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 26803487 - 26803454
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||| ||||||||||||||    
T  26803487 caatgcataatatatgcaaagtccggggttcaaa 26803454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 29042563 - 29042600
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  29042563 aatgcataatatatgtaagatccggggttcaaatcccg 29042600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 29739362 - 29739395
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||| |||||||||||||||||||||||    
T  29739362 caatgcataaaatatgcaaggtccggggttcaaa 29739395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 32950797 - 32950764
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||||||| |||||||    
T  32950797 caatgcataatatatgcaaggtccggagttcaaa 32950764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 36679615 - 36679648
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  36679615 caatggataatatatgcaaggtccggggttcaaa 36679648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 39252182 - 39252149
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||| |||||||||||||||||||||||||||||    
T  39252182 caatacataatatatgcaaggtccggggttcaaa 39252149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 45003425 - 45003458
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  45003425 caatggataatatatgcaaggtccggggttcaaa 45003458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 46707897 - 46707930
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||| |||||||||||||    
T  46707897 caatgcataatatatgcaagttccggggttcaaa 46707930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 49222841 - 49222874
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||| ||||||||||||||||||||||||||    
T  49222841 caatgcacaatatatgcaaggtccggggttcaaa 49222874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 34
Target Start/End: Complemental strand, 3937553 - 3937525
Alignment:
Q  6 cataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||||||||||    
T  3937553 cataatatatgcaaggtccggggttcaaa 3937525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 10356749 - 10356717
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||| ||||||||||    
T  10356749 aatgcataatatatgcaaggtctggggttcaaa 10356717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 24529713 - 24529757
Alignment:
Q  4 tgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||| ||||| |||||||||||||| |||||||| |||||||    
T  24529713 tgcataaaatatgtaaggtccggggttcgaatcccggccaccacc 24529757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 41769850 - 41769818
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||| ||||||||||||||||||    
T  41769850 aatgcataatatatccaaggtccggggttcaaa 41769818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 46040608 - 46040560
Alignment:
Q  1 caatgcataa-tatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||| |||||||||||||| |||||| || |||||||||||||    
T  46040608 caatgcataaatatatgcaaggtcccgggttcgaaccccggacaccacc 46040560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 54294457 - 54294411
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  54294457 aatgcataatatatgcaaggtccggggttcaaaccccggacaccacc 54294411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 49042017 - 49041971
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  49042017 caatgcataatatatgcaaggtccggggttcaaaccccggccaccac 49041971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 20799430 - 20799383
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||||||||||||||| || || |||||||    
T  20799430 caatgcataatatatgcaaggtccggggttcaaaccctggtcaccacc 20799383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 54857651 - 54857604
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||| ||||||||||||||||||||||| ||||| |||||||    
T  54857651 caatgcataaaatatgcaaggtccggggttcaaaccccggccaccacc 54857604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 56497644 - 56497597
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  56497644 caatgcataatatatgcaaggtctggggttcgaatcccggccaccacc 56497597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3936652 - 3936698
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||||||||||| || ||||| ||||||    
T  3936652 caatgcataatatatgcaaggtccggggttcgaaccccggccaccac 3936698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7230305 - 7230351
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||||||||||||||| | ||| ||||||    
T  7230305 caatgcataatatatgcaaggtccggggttcaaacctcggccaccac 7230351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 11198357 - 11198399
Alignment:
Q  5 gcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||||||||||| ||||| ||||||    
T  11198357 gcataatatatgcaaggtccggggttcaaaccccggccaccac 11198399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11949799 - 11949761
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  11949799 caatgcataatatatgcaaggtccggggttcaaaccccg 11949761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19479513 - 19479475
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  19479513 caatgcataatatatgcaaggtccggggttcaaaccccg 19479475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25978342 - 25978388
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  25978342 caatgcataatatatgcaaggtccgaggttcgaatcccagacaccac 25978388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 56551628 - 56551582
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  56551628 caatgcataatatatgcaaggtccgaggttcaaaccccggccaccac 56551582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 281616 - 281661
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    |||||||||||||||| ||||||||||||||||| | |||||||||    
T  281616 caatgcataatatatgaaaggtccggggttcaaacctcggacacca 281661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 675943 - 675976
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  675943 caatgcataatatatgcaaggtccggggttcaaa 675976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7371584 - 7371539
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    |||| |||||||||||||||||||||||||| || |||||||||||    
T  7371584 caatacataatatatgcaaggtccggggttcgaaccccggacacca 7371539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 16737096 - 16737133
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatccc 38  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  16737096 caatgcataatatatgcaaggtcgggggttcaaatccc 16737133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 17423213 - 17423180
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  17423213 caatgcataatatatgcaaggtccggggttcaaa 17423180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 20383513 - 20383546
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  20383513 caatgcataatatatgcaaggtccggggttcaaa 20383546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 25783485 - 25783452
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  25783485 caatgcataatatatgcaaggtccggggttcaaa 25783452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 44815967 - 44816004
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  44815967 aatgcataatatatgcaaggtccggggttcaaaccccg 44816004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 49953439 - 49953406
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  49953439 caatgcataatatatgcaaggtccggggttcaaa 49953406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 19314197 - 19314237
Alignment:
Q  6 cataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  19314197 cataatatatgcaaggtccggggctcaaaccccggacacca 19314237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 49952707 - 49952663
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacc 45  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||    
T  49952707 caatgcataatatatgcaaggtcagtggttcaaatcccggccacc 49952663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 9946452 - 9946499
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||| ||||||||||||||||||||||| ||||  |||||||    
T  9946452 caatgcataaaatatgcaaggtccggggttcaaaccccgaccaccacc 9946499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 11144701 - 11144654
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||| ||||||  || |||||||||||||    
T  11144701 caatgcataatatatgcaaggtctggggtttgaaccccggacaccacc 11144654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 28435284 - 28435237
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||| ||||||||||| ||| | |||||||    
T  28435284 caatgcataatatatgcaaggttcggggttcaaaccccagccaccacc 28435237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 34834042 - 34833995
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||||||||||| ||  | ||||||||||    
T  34834042 caatgcataatatatgcaaggtccggggttcgaacactggacaccacc 34833995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 37921771 - 37921810
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccgg 40  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  37921771 caatgcataatatatgcaaggtccgggattcaaaccccgg 37921810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 42316857 - 42316814
Alignment:
Q  4 tgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||| ||||| |||||||| ||||||    
T  42316857 tgcataatatatgcaaggtccgaggttcgaatcccggtcaccac 42316814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 43034378 - 43034331
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||| | |||||||| ||||| |||||||    
T  43034378 caatgcataatatatgcaaggtctgaggttcaaaccccggccaccacc 43034331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 46676534 - 46676487
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||||||||||| |  ||| |||||||||    
T  46676534 caatgcataatatatgcaaggtccggggttcgacccccagacaccacc 46676487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 47806292 - 47806245
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||| ||||||| || |||| ||||||||    
T  47806292 caatgcataatatatgcaaggtctggggttcgaaccccgaacaccacc 47806245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 48226534 - 48226495
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccgg 40  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  48226534 caatgcataaaatatgcaaggtctggggttcaaatcccgg 48226495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 55061062 - 55061109
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||| ||||||||||| |||  |||||||    
T  55061062 caatgcataatatatgcaaggtcgggggttcaaattccgaccaccacc 55061109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 2034130 - 2034084
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||  |||||| |||||||||||| |||||||||||    
T  2034130 aatgcataatatatttaaggtctggggttcaaatctcggacaccacc 2034084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 3580740 - 3580786
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||| ||| ||| || |||||||||||||    
T  3580740 aatgcataatatatgcaaggtctgggattcgaaccccggacaccacc 3580786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8495012 - 8495058
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||| ||| | ||||||||||||| ||||||    
T  8495012 caatgcataatatatgcaagatcccgagttcaaatcccggccaccac 8495058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10006365 - 10006411
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||| ||||||| ||| |||| ||||||    
T  10006365 caatgcataatatatgcaaggtctggggttcgaataccggccaccac 10006411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10261805 - 10261759
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||||||    
T  10261805 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 10261759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 11314684 - 11314646
Alignment:
Q  10 atatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||| |||||||| |||||||||||||    
T  11314684 atatatgcaaggtccgaggttcaaaccccggacaccacc 11314646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19588179 - 19588225
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||| ||||||||| ||||| ||||||    
T  19588179 caatgcataaaatatgcaaggtccagggttcaaaccccggccaccac 19588225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19854590 - 19854636
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||| |||||||||| || | ||||||||||    
T  19854590 caatgcataatatatgcaagatccggggttcgaacctcggacaccac 19854636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21114341 - 21114303
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  21114341 caatgcatgatatatgcaaggtccggggttcaaaccccg 21114303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21562650 - 21562696
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||||||    
T  21562650 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 21562696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26926746 - 26926700
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||||||    
T  26926746 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 26926700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 32139373 - 32139411
Alignment:
Q  9 aatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  32139373 aatatatgcaaggtccggggttcgaaccccggacaccac 32139411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35287543 - 35287497
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| |||||||||||||||||||| || ||||| ||||||    
T  35287543 caatgcataaaatatgcaaggtccggggttccaaccccggccaccac 35287497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36490593 - 36490631
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  36490593 caatgcataatgtatgcaagatccggggttcaaatcccg 36490631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38374982 - 38375028
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||| || ||||||| ||||| ||||||    
T  38374982 caatgcataatatatgcaaggtctggagttcaaaccccggccaccac 38375028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 39974527 - 39974573
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||| |||||| |||||||||| | ||||||||||    
T  39974527 caatgcataatatatggaaggtctggggttcaaacctcggacaccac 39974573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 43330171 - 43330217
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||||||    
T  43330171 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 43330217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 47814282 - 47814248
Alignment:
Q  6 cataatatatgcaaggtccggggttcaaatcccgg 40  Q
    ||||||||||||||||||||||||||||| |||||    
T  47814282 cataatatatgcaaggtccggggttcaaaccccgg 47814248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 48283363 - 48283317
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||| ||  ||||||||||||| ||||||||    
T  48283363 caatgcataatatatgcaagttctagggttcaaatcccagacaccac 48283317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 49473670 - 49473700
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttc 31  Q
    |||||||||||||||||||||||||||||||    
T  49473670 caatgcataatatatgcaaggtccggggttc 49473700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 51450237 - 51450283
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||||||    
T  51450237 caatgcataagatatgcaaggtccggagttcaaaccccggccaccac 51450283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 2888900 - 2888945
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||| ||||||||||||||||||| |||||||| ||||| ||||||    
T  2888900 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 2888945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 10035295 - 10035336
Alignment:
Q  6 cataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||| |||||||||| ||||| ||||||    
T  10035295 cataatatatgcaaggtctggggttcaaaccccggccaccac 10035336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 12322698 - 12322731
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||| |||||||||||||    
T  12322698 caatgcataatatatgcaagttccggggttcaaa 12322731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 14202514 - 14202477
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  14202514 aatgcataatatatgtaaggtccggggttcaaaccccg 14202477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 16304134 - 16304101
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  16304134 caatgcataatatatgcaaggtccgggattcaaa 16304101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 21317374 - 21317341
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  21317374 caatgcataatatatgcaaggtcaggggttcaaa 21317341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 22040675 - 22040708
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||| |||||||||||    
T  22040675 caatgcataatatatgcaaggttcggggttcaaa 22040708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Complemental strand, 24665026 - 24664997
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttc 31  Q
    ||||||||||||||||||||||||||||||    
T  24665026 aatgcataatatatgcaaggtccggggttc 24664997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 29908081 - 29908114
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||||||| |||||||    
T  29908081 caatgcataatatatgcaaggtccggagttcaaa 29908114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 34042265 - 34042298
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||| |||||||||||    
T  34042265 caatgcataatatatgcaaggttcggggttcaaa 34042298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 37193274 - 37193307
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  37193274 caatgtataatatatgcaaggtccggggttcaaa 37193307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 42845050 - 42845079
Alignment:
Q  1 caatgcataatatatgcaaggtccggggtt 30  Q
    ||||||||||||||||||||||||||||||    
T  42845050 caatgcataatatatgcaaggtccggggtt 42845079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 43722790 - 43722823
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||| |||||||||||||||||    
T  43722790 caatgcataatatatgtaaggtccggggttcaaa 43722823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 48226717 - 48226750
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||| |||||||||||||||||||||||    
T  48226717 caatgcataaaatatgcaaggtccggggttcaaa 48226750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 49952605 - 49952572
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||| |||||||||||||||||    
T  49952605 caatgcataatatatgtaaggtccggggttcaaa 49952572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 50152272 - 50152235
Alignment:
Q  3 atgcataatatatgcaaggtccggggttcaaatcccgg 40  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  50152272 atgcataatatatgcaaggttcggggttcaaaccccgg 50152235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 50362175 - 50362142
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||||| |||||||||    
T  50362175 caatgcataatatatgcaaggtccagggttcaaa 50362142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 53190321 - 53190358
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  53190321 aatgcataatatatgcaaggtccagggttcgaatcccg 53190358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 54500594 - 54500627
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||| |||||||||||||||||    
T  54500594 caatgcataatatatgtaaggtccggggttcaaa 54500627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 6087773 - 6087805
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||| ||||||||||    
T  6087773 aatgcataatatatgcaaggtctggggttcaaa 6087805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 34264753 - 34264705
Alignment:
Q  1 caatgcataa-tatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||| |||||||||||||| |||||| |||||| |||||||||    
T  34264753 caatgcataaatatatgcaaggtcccgggttcgaatcccagacaccacc 34264705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 36035860 - 36035892
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||| ||||||||||||||||||    
T  36035860 aatgcataatatatccaaggtccggggttcaaa 36035892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42139869 - 42139913
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacc 45  Q
    |||||||||||| |||||| |||||||||||||| ||||| ||||    
T  42139869 caatgcataatacatgcaatgtccggggttcaaaccccggccacc 42139913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 43027318 - 43027362
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    ||||||||||||||||||||| |  ||||| ||||||||||||||    
T  43027318 aatgcataatatatgcaaggttcatggttcgaatcccggacacca 43027362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 51298726 - 51298686
Alignment:
Q  7 ataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||| |||||||  |||||||||||||||    
T  51298726 ataatatatgcaaggttcggggtttgaatcccggacaccac 51298686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20120757 - 20120711
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  20120757 caatgcataatatatgcaaggttcggggttcaaatcccggacaccac 20120711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 29544652 - 29544699
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||    
T  29544652 caatgcataatatatgcaaggtccggggttcaaaccccggccaccacc 29544699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20455916 - 20455962
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||    
T  20455916 caatgcataatatatgcaaggtccggggttcgaatcccggccaccac 20455962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 27848184 - 27848230
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||    
T  27848184 aatgcataatatatgcaaggtccggggttcaaaccccggccaccacc 27848230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 10735865 - 10735820
Alignment:
Q  3 atgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||    
T  10735865 atgcataatatatgcaaggtccggggttcaaaccccggccaccacc 10735820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24592882 - 24592835
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||||||    
T  24592882 caatgcataatatatgcaaggtctggggttcaaaccccggccaccacc 24592835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 36474787 - 36474834
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||| |||||||||||||||||||||||| |||| |||||||    
T  36474787 caatgcataaaatatgcaaggtccggggttcaaattccggccaccacc 36474834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 41778980 - 41778933
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||||    
T  41778980 caatgcataatatatgcaaggtccgaggttcgaatcccggccaccacc 41778933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 42791320 - 42791359
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccgg 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  42791320 caatgcataatatatgcaaggtccggggttcaaaccccgg 42791359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20200730 - 20200776
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  20200730 caatgcataatatatgcaaggtccagggttcaaaccccggccaccac 20200776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 25186278 - 25186232
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||||||||||||||| ||| | ||||||    
T  25186278 caatgcataatatatgcaaggtccggggttcaaaccccagccaccac 25186232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 31476997 - 31477043
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||| |||||| ||||||||||||||||| |||||||    
T  31476997 aatgcataatatatacaaggttcggggttcaaatcccggccaccacc 31477043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 31815923 - 31815885
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  31815923 caatgcataatatatgcaaggtccggggttcaaaccccg 31815885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 8091194 - 8091161
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  8091194 caatgcataatatatgcaaggtccggggttcaaa 8091161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 20565111 - 20565078
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  20565111 caatgcataatatatgcaaggtccggggttcaaa 20565078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 36359339 - 36359372
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  36359339 caatgcataatatatgcaaggtccggggttcaaa 36359372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7052798 - 7052846
Alignment:
Q  1 caatgcataata-tatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||| |||||||||||||||| ||||| |||||||||||||    
T  7052798 caatgcataataatatgcaaggtccggggctcaaaccccggacaccacc 7052846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 27411120 - 27411164
Alignment:
Q  4 tgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||||||||| || ||||| |||||||    
T  27411120 tgcataatatatgcaaggtccggggttcgaaccccggccaccacc 27411164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 31543038 - 31543070
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||||||||||||||    
T  31543038 aatgcataatatatgcaaggtccggggttcaaa 31543070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4056815 - 4056862
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||||||| |||| |||| ||| |||||||    
T  4056815 caatgcataatatatgcaaggtccggagttcgaatctcgggcaccacc 4056862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 4122049 - 4122010
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccgg 40  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  4122049 caatgcataatatatgcaaggtctggggtttaaatcccgg 4122010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 6579317 - 6579278
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccgg 40  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  6579317 caatgcataatatatgcaaggtctggggttcgaatcccgg 6579278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 22571901 - 22571866
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatc 36  Q
    ||||||||||||||||||| ||||||||||||||||    
T  22571901 caatgcataatatatgcaatgtccggggttcaaatc 22571866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 22709110 - 22709149
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccgg 40  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  22709110 caatgcataaaatatgcaaggtccggggttcaaaccccgg 22709149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 24593401 - 24593448
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||||||||||| || || | ||||||||    
T  24593401 caatgcataatatatgcaaggtccggggttcgaaccctgaacaccacc 24593448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 28771607 - 28771654
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||| |||| ||||| || |||||||||||||    
T  28771607 caatgcataatatatgcaagatccgcggttcgaaccccggacaccacc 28771654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 35820337 - 35820290
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||| ||||||||||||||||||||| | ||| |||||||    
T  35820337 caatgcataatacatgcaaggtccggggttcaaacctcggccaccacc 35820290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 44810730 - 44810777
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||| ||||||||||||||||||||||||||||| ||| | |||||||    
T  44810730 caatacataatatatgcaaggtccggggttcaaaccccagccaccacc 44810777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 660858 - 660820
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  660858 caatgcataatatatgcaaggtccagggttcaaaccccg 660820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2256996 - 2257042
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||| ||||||| || ||||| ||||||    
T  2256996 caatgcataatatatgcaaggtctggggttcgaaccccggccaccac 2257042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3113763 - 3113725
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  3113763 caatgcataaaatatgcaaggtccgggattcaaatcccg 3113725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3708718 - 3708764
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||||||    
T  3708718 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 3708764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8781686 - 8781648
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||| |||||||||||||||||||||| ||||    
T  8781686 caatgcataatgtatgcaaggtccggggttcaaaccccg 8781648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11868698 - 11868652
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||||||    
T  11868698 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 11868652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 12124570 - 12124600
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttc 31  Q
    |||||||||||||||||||||||||||||||    
T  12124570 caatgcataatatatgcaaggtccggggttc 12124600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12413518 - 12413564
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||| | |||||||| |||| |||||||    
T  12413518 caatgcataatatatgcaaggtctgaggttcaaaccccgtacaccac 12413564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12425578 - 12425624
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||| | |||||||| |||| |||||||    
T  12425578 caatgcataatatatgcaaggtctgaggttcaaaccccgtacaccac 12425624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 17842748 - 17842702
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||| ||| ||||| |||||||| |||||||||||    
T  17842748 caatgcataatatatgtaagatccggagttcaaattccggacaccac 17842702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21258641 - 21258687
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||| |||||||||||||| ||||||| |||||||| ||||||    
T  21258641 caatgcatgatatatgcaaggtctggggttcgaatcccggccaccac 21258687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22523048 - 22523002
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||| ||||||||||||||||| || |||||||||||||| ||||||    
T  22523048 caatacataatatatgcaaggttcgaggttcaaatcccggccaccac 22523002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23250356 - 23250318
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  23250356 caatgcataatatatgcaaggtccagggttcaaaccccg 23250318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24393270 - 24393316
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||| | ||||| || ||||||||||||    
T  24393270 caatgcataatatatgcaaggtctgaggttcgaaccccggacaccac 24393316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 27152379 - 27152425
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||| ||||||| || || ||||||||||    
T  27152379 aatgcataatatatgcaaggtctggggttcgaacccaggacaccacc 27152425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 29734716 - 29734754
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  29734716 caatgcataatatatgcaaggtccgtggttcaaaccccg 29734754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29809351 - 29809397
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||| ||||| |||||||| |||||||| ||||||    
T  29809351 caatgcataatatatgaaaggtacggggttcgaatcccggccaccac 29809397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35360091 - 35360045
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||||||    
T  35360091 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 35360045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 4180723 - 4180760
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  4180723 aatgcataaaatatgcaaggtccggggttcaaaccccg 4180760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 5168614 - 5168577
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  5168614 aatgcataatatatgcaaggttcggggttcaaaccccg 5168577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9718419 - 9718464
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    ||||||||||||| |||||| ||| | |||||||||||||||||||    
T  9718419 caatgcataatatttgcaagttccagagttcaaatcccggacacca 9718464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 10723965 - 10724010
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||| | |||||||| ||||| ||||||    
T  10723965 aatgcataatatatgcaaggtctgaggttcaaaccccggccaccac 10724010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 16390630 - 16390675
Alignment:
Q  3 atgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||| |||||||||||||||||||| || ||||| |||||||    
T  16390630 atgcataaaatatgcaaggtccggggttcgaaccccggccaccacc 16390675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 22607178 - 22607223
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||| |||||||||||||| |  ||||||||||||    
T  22607178 aatgcataatatatgtaaggtccggggttcgagccccggacaccac 22607223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 23407054 - 23407021
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  23407054 caatgcataatatatgcaaggtctggggttcaaa 23407021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 24579704 - 24579671
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||||| |||||||||    
T  24579704 caatgcataatatatgcaaggtccagggttcaaa 24579671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 30089074 - 30089107
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  30089074 caatgcataatatatacaaggtccggggttcaaa 30089107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 30125678 - 30125711
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  30125678 caatgcataatatatacaaggtccggggttcaaa 30125711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 32458327 - 32458360
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||||| |||||||||    
T  32458327 caatgcataatatatgcaaggtccagggttcaaa 32458360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34977229 - 34977274
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    |||||||||||||||||||||||||| ||| ||| ||||| |||||    
T  34977229 caatgcataatatatgcaaggtccggagtttaaaccccggccacca 34977274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 41859877 - 41859922
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    |||||||||| |||||||||||| |||||||||| ||||| |||||    
T  41859877 caatgcataaaatatgcaaggtctggggttcaaaccccggccacca 41859922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 43043201 - 43043168
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  43043201 caatgcataatgtatgcaaggtccggggttcaaa 43043168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 44526153 - 44526198
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    |||||||||||||| |||||||||||| |||||| ||||| |||||    
T  44526153 caatgcataatatacgcaaggtccgggattcaaaccccggccacca 44526198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7537135 - 7537167
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaa 33  Q
    |||||||||||||||||||||||||| ||||||    
T  7537135 caatgcataatatatgcaaggtccggagttcaa 7537167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 15447748 - 15447704
Alignment:
Q  3 atgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||| || ||||||| ||||| ||||||    
T  15447748 atgcataatatatgcaaggtctggagttcaaaccccggccaccac 15447704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 20017089 - 20017045
Alignment:
Q  4 tgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||| ||||||||||||||||| ||||||||| ||| |||||||    
T  20017089 tgcattatatatgcaaggtccggagttcaaatctcggccaccacc 20017045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 25612329 - 25612297
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaa 33  Q
    ||||||||||||||||||||||||||| |||||    
T  25612329 caatgcataatatatgcaaggtccgggattcaa 25612297  T

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Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 29599965 - 29599997
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||| ||||||||||||||||||    
T  29599965 aatgcataatatatccaaggtccggggttcaaa 29599997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 30978388 - 30978420
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||| ||||||||||    
T  30978388 aatgcataatatatgcaaggtcaggggttcaaa 30978420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 40853852 - 40853816
Alignment:
Q  3 atgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  40853852 atgcataatatatgcaaggtccggggatcaaaccccg 40853816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 30176453 - 30176408
Alignment:
Q  3 atgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  30176453 atgcataatatatgcaaggtccggggttcaaaccccggacaccacc 30176408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12748926 - 12748973
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||    
T  12748926 caatgcataatatatgcaaggtccggggttcaaaccccggccaccacc 12748973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 32051568 - 32051521
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||    
T  32051568 caatgcataatatatgcaaggtccggggttcaaaccccggccaccacc 32051521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 19260615 - 19260568
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||| ||||||||||||||||| ||||| |||||||    
T  19260615 caatgcataatatatgtaaggtccggggttcaaaccccggccaccacc 19260568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 19778090 - 19778137
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||||||||||| |||||  |||||||||    
T  19778090 caatgcataatatatgcaaggtccggggttcgaatcctagacaccacc 19778137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24838206 - 24838159
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||| ||||||||||||||||||||||| ||||| |||||||    
T  24838206 caatgcataaaatatgcaaggtccggggttcaaaccccggccaccacc 24838159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 27587246 - 27587293
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||| ||||||||||||||||||||||||| ||||| |||||||    
T  27587246 caatgcatgatatatgcaaggtccggggttcaaaccccggccaccacc 27587293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 444438 - 444484
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||||||||||| ||| ||||| ||||||    
T  444438 caatgcataatatatgcaaggtccggggtttaaaccccggccaccac 444484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8881300 - 8881346
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  8881300 caatgcataatatatgcaaggtccagggttcaaaccccggccaccac 8881346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 33105416 - 33105449
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  33105416 caatgcataatatatgcaaggtccggggttcaaa 33105449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 12714406 - 12714370
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcc 37  Q
    |||||||||||||||||||||| ||||||||||||||    
T  12714406 caatgcataatatatgcaaggttcggggttcaaatcc 12714370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 6447214 - 6447249
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatc 36  Q
    |||||||||||||||||||||||||| |||||||||    
T  6447214 caatgcataatatatgcaaggtccggagttcaaatc 6447249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6471536 - 6471583
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||| || ||||||||||| ||||| |||||||    
T  6471536 caatgcataatatatgcaatgttcggggttcaaaccccggccaccacc 6471583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12800936 - 12800889
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||| ||||||||||||||||||||||||||||| ||||  |||||||    
T  12800936 caatacataatatatgcaaggtccggggttcaaaccccgaccaccacc 12800889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 13124399 - 13124360
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccgg 40  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  13124399 caatgcataaaatatgcaaggtccggggttcaaaccccgg 13124360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 22775653 - 22775700
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||| |||||||||||||||||||||| || || |||||||    
T  22775653 caatgcataatttatgcaaggtccggggttcaaaccctggccaccacc 22775700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 29924953 - 29924906
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||| ||||||| ||| ||| |||||||||    
T  29924953 caatgcataatatatgcaaggttcggggtttaaaccccagacaccacc 29924906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31832126 - 31832079
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||| ||||||| ||| || |||||||||||||    
T  31832126 caatgcataatatatgcaatgtccgggtttcgaaccccggacaccacc 31832079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 33482185 - 33482146
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccgg 40  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  33482185 caatgcataatttatgcaaggtccagggttcaaatcccgg 33482146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 44975203 - 44975250
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||| |||| ||| || |||||||||||||    
T  44975203 caatgcataatatatgcaaggttcgggattcgaaacccggacaccacc 44975250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1244741 - 1244695
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||| ||||||| ||||||| || ||||||||||||    
T  1244741 caatgcataatatatacaaggtctggggttcgaaccccggacaccac 1244695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1877698 - 1877656
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggaca 43  Q
    |||||||||||||||||||||||  |||||| |||||||||||    
T  1877698 caatgcataatatatgcaaggtcacgggttcgaatcccggaca 1877656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4830033 - 4830071
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  4830033 caatgcataatatatgcaaggttcggggttcgaatcccg 4830071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7553704 - 7553750
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||||  ||||||||  |||||||||||    
T  7553704 caatgcataatatatgcaaggtccaaggttcaaactccggacaccac 7553750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7968976 - 7968931
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||||| ||||||||||||| | ||||||    
T  7968976 caatgcataatatatgcaaggtcc-gggttcaaatcccagccaccac 7968931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16869551 - 16869597
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||| ||||| || ||||||||||||||||| ||||||    
T  16869551 caatgcataatatttgcaaagttcggggttcaaatcccggccaccac 16869597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 18942944 - 18942986
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacac 44  Q
    ||||||||||||||||| |||||||| |||||| |||||||||    
T  18942944 aatgcataatatatgcatggtccgggtttcaaaccccggacac 18942986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19163572 - 19163534
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||| |||||||||||||||||||||| ||||    
T  19163572 caatgcataatttatgcaaggtccggggttcaaaccccg 19163534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19488325 - 19488371
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||| ||||||| |||| || |||||||||||||||    
T  19488325 caatgcataatatatacaaggtctggggctcgaatcccggacaccac 19488371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20665399 - 20665353
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||||||    
T  20665399 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 20665353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 22948117 - 22948083
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaat 35  Q
    |||||||||||||||||||||||||||||| ||||    
T  22948117 caatgcataatatatgcaaggtccggggtttaaat 22948083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24023451 - 24023413
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  24023451 caatgcataaaatatgcaaggtccggggttcaaaccccg 24023413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 27571885 - 27571847
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  27571885 caatgcataatatatgcaaggtttggggttcaaatcccg 27571847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30550762 - 30550716
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||||||    
T  30550762 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 30550716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37141382 - 37141428
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||| |||||||||||  |||| ||||||    
T  37141382 caatgcataatatatgcaaggttcggggttcaaactccggccaccac 37141428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 40795402 - 40795448
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||| |||||||||||||||||||||||||| ||| |||| ||||||    
T  40795402 caatacataatatatgcaaggtccggggttctaattccggccaccac 40795448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42208505 - 42208459
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||||| |||||||| | ||||| ||||    
T  42208505 caatgcataatatatgcaaggtccgaggttcaaacctcggaccccac 42208459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44215511 - 44215465
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||||||    
T  44215511 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 44215465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 3650546 - 3650591
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||| ||||| ||||||||||| ||||| ||||||    
T  3650546 aatgcataatatatgtaaggttcggggttcaaaccccggccaccac 3650591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 7839153 - 7839108
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||  ||||||| ||||||| |||||||    
T  7839153 aatgcataatatatgcaaggtatggggttcgaatcccgaacaccac 7839108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 8717511 - 8717478
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||| |||||||||||    
T  8717511 caatgcataatatatgcaaggttcggggttcaaa 8717478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 10871930 - 10871897
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  10871930 caatgcataatgtatgcaaggtccggggttcaaa 10871897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 11053001 - 11053030
Alignment:
Q  1 caatgcataatatatgcaaggtccggggtt 30  Q
    ||||||||||||||||||||||||||||||    
T  11053001 caatgcataatatatgcaaggtccggggtt 11053030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 15147060 - 15147027
Alignment:
Q  6 cataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||||||||||||||| ||||||||||    
T  15147060 cataatatatgcaaggtccggggctcaaatcccg 15147027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 15438478 - 15438507
Alignment:
Q  1 caatgcataatatatgcaaggtccggggtt 30  Q
    ||||||||||||||||||||||||||||||    
T  15438478 caatgcataatatatgcaaggtccggggtt 15438507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 15529782 - 15529811
Alignment:
Q  1 caatgcataatatatgcaaggtccggggtt 30  Q
    ||||||||||||||||||||||||||||||    
T  15529782 caatgcataatatatgcaaggtccggggtt 15529811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 18533694 - 18533727
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||| |||||||||||||    
T  18533694 caatgcataatatatgcaagatccggggttcaaa 18533727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 24195274 - 24195307
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||| |||||||||||||||||||||||||||||    
T  24195274 caatacataatatatgcaaggtccggggttcaaa 24195307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 27718930 - 27718897
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||||||| |||||||    
T  27718930 caatgcataatatatgcaaggtccggagttcaaa 27718897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 37938521 - 37938558
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  37938521 aatgcataatatatgcaaagtccgaggttcaaatcccg 37938558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 39821909 - 39821942
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  39821909 caatgcataatatatgcaaggtctggggttcaaa 39821942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 44794918 - 44794951
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||||||| |||||||    
T  44794918 caatgcataatatatgcaaggtccggagttcaaa 44794951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 4263840 - 4263876
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcc 37  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  4263840 caatgcataatgtatgcaaggtccgaggttcaaatcc 4263876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 6235585 - 6235541
Alignment:
Q  3 atgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||| |||||||||| |||||| ||||| ||||||    
T  6235585 atgcataatatatgtaaggtccgggattcaaaccccggccaccac 6235541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 26773836 - 26773800
Alignment:
Q  3 atgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||||||||||||||  ||||||||||||||    
T  26773836 atgcataatatatgcaaggtctagggttcaaatcccg 26773800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 32286397 - 32286353
Alignment:
Q  4 tgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||| | ||||||||||| ||||| |||||||    
T  32286397 tgcataatatatgcaagattcggggttcaaaccccggccaccacc 32286353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 27679524 - 27679569
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  27679524 aatgcataatatatgcaaggttcggggttcaaatcccggacaccac 27679569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 3445283 - 3445236
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||    
T  3445283 caatgcataatgtatgcaaggtccggggttcaaatcccggccaccacc 3445236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 22522837 - 22522790
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||    
T  22522837 caatgcataatatatgcaaggtccggggttcaaaccccggccaccacc 22522790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 32339760 - 32339807
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||    
T  32339760 caatgcataatatatgcaaggtccggggttcgaatcccggccaccacc 32339807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40715985 - 40715939
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  40715985 caatgcataatatatgcaaggtccggggttcaaaccccggccaccac 40715939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6489032 - 6489079
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||||||    
T  6489032 caatgcataatatatgcaaggtctggggttcaaaccccggccaccacc 6489079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6624801 - 6624848
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||||||||||| || ||||| |||||||    
T  6624801 caatgcataatatatgcaaggtccggggttcgaaccccggccaccacc 6624848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 35109425 - 35109471
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||    
T  35109425 caatacataatatatgcaaggtccgaggttcgaatcccggacaccac 35109471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5846054 - 5846099
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||    
T  5846054 caatgcataatatatgcaaagtctggggttcaaaccccggacacca 5846099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 21139183 - 21139146
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  21139183 aatgcataatatatgcaaggtccggggttcaaaacccg 21139146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 42473919 - 42473952
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  42473919 caatgcataatatatgcaaggtccggggttcaaa 42473952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 32200483 - 32200451
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  32200483 caatgcataatatatgcaaggtccggggttcaa 32200451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 11017202 - 11017245
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacacc 45  Q
    |||||||||||||||||||||| | ||||| |||||||||||||    
T  11017202 aatgcataatatatgcaaggtctgaggttcgaatcccggacacc 11017245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11720919 - 11720965
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||||||    
T  11720919 caatgcataatatatgcaaggt-cggggttcaaaccccggccaccacc 11720965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 26223635 - 26223592
Alignment:
Q  4 tgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||| |||||| |||||||||||||||||||||||| ||||||    
T  26223635 tgcattatatatacaaggtccggggttcaaatcccggccaccac 26223592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 26655489 - 26655536
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||| |||||||||||||| || ||||| |||||||    
T  26655489 caatgcataatatatgtaaggtccggggttcgaaccccggccaccacc 26655536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 26927074 - 26927121
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||| |||||||||||||| || ||||| |||||||    
T  26927074 caatgcataatatatgtaaggtccggggttcgaaccccggccaccacc 26927121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31708182 - 31708135
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||| ||||||| || | |||||||||||    
T  31708182 caatgcataatatatgcaaggtctggggttcgaacctcggacaccacc 31708135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 31958496 - 31958457
Alignment:
Q  9 aatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  31958496 aatatatgcaaggtccggggttcgaaccccggacaccacc 31958457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 32559329 - 32559376
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||| ||||| |||||| |||||||||||||||| |||||||    
T  32559329 caatgcataaaatatgtaaggtctggggttcaaatcccggccaccacc 32559376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 34191458 - 34191497
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccgg 40  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  34191458 caatgcataaaatatgcaaggtccggggttcaaaccccgg 34191497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 34436876 - 34436923
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||| |||||||||||| ||||  |||||||    
T  34436876 caatgcataatatatgcaagggccggggttcaaaccccgcccaccacc 34436923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 43396879 - 43396926
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||| ||||||||| |||| | ||||||||||||||    
T  43396879 caatgcataatatatgtaaggtccggtgttcgattcccggacaccacc 43396926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13864369 - 13864407
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  13864369 caatacataatatatgcaaggtccggggttcaaaccccg 13864407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 14474863 - 14474905
Alignment:
Q  5 gcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||    
T  14474863 gcataatatatgcaaggtccagggttcaaaccccggccaccac 14474905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 18331732 - 18331778
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||||||||||  ||||| ||||||    
T  18331732 caatgcataaaatatgcaaggtccggggttcaagccccggccaccac 18331778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20721075 - 20721113
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  20721075 caatacataatatatgcaaggtccggggttcaaaccccg 20721113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 25604033 - 25603991
Alignment:
Q  4 tgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    ||||||||||||||||||| |||||||| |||||||| |||||    
T  25604033 tgcataatatatgcaaggttcggggttcgaatcccggccacca 25603991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28207157 - 28207203
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| |||||||||||||| ||||| |||||||| ||||||    
T  28207157 caatgcataaaatatgcaaggtccgaggttcgaatcccggccaccac 28207203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28604454 - 28604408
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||| ||| |||||||||||||| |||| ||||||||||    
T  28604454 caatgcataataaatgtaaggtccggggttcgaatcacggacaccac 28604408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34702515 - 34702561
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||| |||||||||||||| ||||| || ||||||    
T  34702515 caatgcataatatatgaaaggtccggggttcgaatcctggccaccac 34702561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37462136 - 37462182
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||||||    
T  37462136 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 37462182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 37932355 - 37932385
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttc 31  Q
    |||||||||||||||||||||||||||||||    
T  37932355 caatgcataatatatgcaaggtccggggttc 37932385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41630148 - 41630102
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||| |||| |||||| ||||| ||||||    
T  41630148 caatgcataatatatgcaaggttcgggattcaaaccccggtcaccac 41630102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 42005131 - 42005177
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||| ||||||  |||| |||||||||||    
T  42005131 aatgcataatatatgcaaggtctggggtttgaatctcggacaccacc 42005177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 43135229 - 43135184
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||| ||||||| ||||||||||||| ||||||||    
T  43135229 caatgcataatatatgtaaggtcc-gggttcaaatcccagacaccac 43135184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 4763222 - 4763189
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||| |||||||||||||||||    
T  4763222 caatgcataatatatgtaaggtccggggttcaaa 4763189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 6424939 - 6424906
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  6424939 caatgcataatatatacaaggtccggggttcaaa 6424906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 10704367 - 10704334
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||| |||||||||||||||||||||||    
T  10704367 caatgcataaaatatgcaaggtccggggttcaaa 10704334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 16579410 - 16579377
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||| ||||||||    
T  16579410 caatgcataatatatgcaaggtccgtggttcaaa 16579377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 17090892 - 17090937
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||  ||||||||||||||||||||| ||||| ||||||    
T  17090892 aatgcataattaatgcaaggtccggggttcaaaccccggccaccac 17090937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 18589903 - 18589874
Alignment:
Q  1 caatgcataatatatgcaaggtccggggtt 30  Q
    ||||||||||||||||||||||||||||||    
T  18589903 caatgcataatatatgcaaggtccggggtt 18589874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 18872693 - 18872738
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||| |||||||| ||||| || ||||||    
T  18872693 aatgcataatatatgcaaggttcggggttcgaatcctggtcaccac 18872738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 20688065 - 20688098
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||||||| |||||||    
T  20688065 caatgcataatatatgcaaggtccggagttcaaa 20688098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 25979869 - 25979902
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  25979869 caatgcataatgtatgcaaggtccggggttcaaa 25979902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 27903138 - 27903171
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||| |||||||||||    
T  27903138 caatgcataatatatgcaaggttcggggttcaaa 27903171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 33928664 - 33928693
Alignment:
Q  1 caatgcataatatatgcaaggtccggggtt 30  Q
    ||||||||||||||||||||||||||||||    
T  33928664 caatgcataatatatgcaaggtccggggtt 33928693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 42708000 - 42708045
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    ||||||||||||||||||||||| ||| ||| |||||||| |||||    
T  42708000 caatgcataatatatgcaaggtctgggattcgaatcccggccacca 42708045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 42817148 - 42817115
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  42817148 caatgcataatatatacaaggtccggggttcaaa 42817115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 1476141 - 1476101
Alignment:
Q  6 cataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    ||||||||||||||||| | |||||| ||||||||||||||    
T  1476141 cataatatatgcaaggttcagggttcgaatcccggacacca 1476101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 4009899 - 4009939
Alignment:
Q  8 taatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||| |||||||||||| ||||| |||||||    
T  4009899 taatatatgcaagggccggggttcaaaccccggccaccacc 4009939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 12670109 - 12670077
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||| |||||||||||    
T  12670109 aatgcataatatatgcaaggttcggggttcaaa 12670077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 24408522 - 24408558
Alignment:
Q  3 atgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  24408522 atgcataatatatgcaaggtctggggttcaaaccccg 24408558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 27545193 - 27545149
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacc 45  Q
    |||||||||||||||||||||  || |||||||||| ||||||||    
T  27545193 caatgcataatatatgcaagggtcgaggttcaaatctcggacacc 27545149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 18714473 - 18714520
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||    
T  18714473 caatgcataatatatgcaaggtccggggttcaaaccccgtacaccacc 18714520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 46987111 - 46987158
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||    
T  46987111 caatgcataatatatgcaaggtccggggttcgaaccccggacaccacc 46987158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27462472 - 27462426
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  27462472 caatgcataatatatgcaaggtccggggttcaaaccccggccaccac 27462426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 19416539 - 19416586
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||| ||||||||||||||||||||||| ||||| |||||||    
T  19416539 caatgcataaaatatgcaaggtccggggttcaaaccccggccaccacc 19416586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 45425478 - 45425525
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||| |||||||| |||||||| |||||||    
T  45425478 caatgcataatatatgcaaggttcggggttcgaatcccggccaccacc 45425525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 47155140 - 47155093
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||||| |||||| || |||||||||||||    
T  47155140 caatgcataatatatgcaaggtccagggttcgaaccccggacaccacc 47155093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10244752 - 10244797
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  10244752 caatgcataatatatgcaaggtccggggttcaaa-cccggccaccac 10244797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19599170 - 19599208
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  19599170 caatgcataatatatgcaaggtccggggttcaaaccccg 19599208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37624568 - 37624614
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||||    
T  37624568 caatgcataatatatgcaaggtcgggggttcgaatcccggccaccac 37624614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 48527215 - 48527261
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||||||| |||| |||||||| ||||||    
T  48527215 caatgcataatatatgcaaggtccggagttcgaatcccggccaccac 48527261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 7670459 - 7670492
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  7670459 caatgcataatatatgcaaggtccggggttcaaa 7670492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 19626561 - 19626528
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  19626561 caatgcataatatatgcaaggtccggggttcaaa 19626528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 20085795 - 20085762
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  20085795 caatgcataatatatgcaaggtccggggttcaaa 20085762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 39280854 - 39280821
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  39280854 caatgcataatatatgcaaggtccggggttcaaa 39280821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 46737810 - 46737843
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  46737810 caatgcataatatatgcaaggtccggggttcaaa 46737843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 1079728 - 1079693
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatc 36  Q
    |||||||||| |||||||||||||||||||||||||    
T  1079728 caatgcataaaatatgcaaggtccggggttcaaatc 1079693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 2618704 - 2618739
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatc 36  Q
    ||||||||||||||||||||||||||||||| ||||    
T  2618704 caatgcataatatatgcaaggtccggggttcgaatc 2618739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7872784 - 7872737
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||| ||||||| || || ||||||||||    
T  7872784 caatgcataatatatgcaaggtctggggttcgaacccaggacaccacc 7872737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 8084452 - 8084499
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||| |||||||||||||||||||| || ||||| |||||||    
T  8084452 caatgcataaaatatgcaaggtccggggttcgaaccccggccaccacc 8084499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27833437 - 27833390
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||| ||||||||||||||||| ||||  |||||||    
T  27833437 caatgcataatatatgtaaggtccggggttcaaaccccgaccaccacc 27833390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 34
Target Start/End: Complemental strand, 42095977 - 42095946
Alignment:
Q  3 atgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||    
T  42095977 atgcataatatatgcaaggtccggggttcaaa 42095946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3830093 - 3830139
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||||| ||||||||| ||| | ||||||    
T  3830093 caatgcataatatatgcaaggtccagggttcaaaccccagccaccac 3830139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 14671195 - 14671233
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  14671195 caatgcataatatatacaaggtccggggttcgaatcccg 14671233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20763179 - 20763225
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||||||    
T  20763179 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 20763225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 21322201 - 21322247
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||| |||||||||||| ||||||||| ||||| |||||||    
T  21322201 aatgcataatgtatgcaaggtccagggttcaaaccccggccaccacc 21322247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22777395 - 22777350
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||| |||||||| |||||||| ||||||    
T  22777395 caatgcataatatatgcaaggt-cggggttcgaatcccggccaccac 22777350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25288689 - 25288735
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||| ||||||||||| | ||||||    
T  25288689 caatgcataagatatgcaaggtccggagttcaaatcccagccaccac 25288735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29488745 - 29488791
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||||||    
T  29488745 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 29488791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33232433 - 33232387
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||||||    
T  33232433 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 33232387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34284575 - 34284529
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||||||    
T  34284575 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 34284529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 41029297 - 41029335
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  41029297 caatgtataatatatgcaaggtccggggttcgaatcccg 41029335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 34
Target Start/End: Complemental strand, 42753560 - 42753530
Alignment:
Q  4 tgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||||||||||||    
T  42753560 tgcataatatatgcaaggtccggggttcaaa 42753530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42829270 - 42829224
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||| |||||||||||||  |||| ||||||    
T  42829270 caatgcataatatatgcaagctccggggttcaaactccggccaccac 42829224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 48629101 - 48629063
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  48629101 caatgcataatatatgcaaggtccggggtttaaaccccg 48629063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 5041364 - 5041397
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  5041364 caatgcataatatatgcaaggtctggggttcaaa 5041397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5963863 - 5963826
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatccc 38  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  5963863 caatgcataaaatatgcaaggttcggggttcaaatccc 5963826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6768743 - 6768698
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    ||||||||||||||||||||||| | ||||| |||| |||||||||    
T  6768743 caatgcataatatatgcaaggtctgaggttcgaatctcggacacca 6768698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 10242506 - 10242543
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  10242506 aatgcataatatatgcaaggtccagggttcaaaccccg 10242543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 14046646 - 14046601
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||| | ||||||||||| ||||| ||||||    
T  14046646 aatgcataatatatgcaagatacggggttcaaaccccggccaccac 14046601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 14356676 - 14356631
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||| | ||||||||||| ||||| ||||||    
T  14356676 aatgcataatatatgcaagatacggggttcaaaccccggccaccac 14356631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 16198409 - 16198454
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||||| |||| |||| ||| ||||||    
T  16198409 aatgcataatatatgcaaggtccggagttcgaatctcggccaccac 16198454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 18023704 - 18023737
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||||| |||||||||    
T  18023704 caatgcataatatatgcaaggtccagggttcaaa 18023737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 22690071 - 22690026
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||  ||||||| || ||||||||||||    
T  22690071 aatgcataatatatgcaaggtttggggttcgaaccccggacaccac 22690026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 23147321 - 23147354
Alignment:
Q  7 ataatatatgcaaggtccggggttcaaatcccgg 40  Q
    |||||||||||||||||||||||||||| |||||    
T  23147321 ataatatatgcaaggtccggggttcaaaccccgg 23147354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 26009302 - 26009347
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||| ||||||| ||  |||||||||||    
T  26009302 aatgcataatatatgcaaggtctggggttcgaactccggacaccac 26009347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 26973819 - 26973774
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||| ||||||||| |||  |||||||||||||||    
T  26973819 aatgcataatatatgtaaggtccggcgtttgaatcccggacaccac 26973774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 34000288 - 34000333
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||| ||||| |||||||||||| |||| ||||||    
T  34000288 aatgcataatatatgtaaggttcggggttcaaataccggccaccac 34000333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 36121679 - 36121716
Alignment:
Q  3 atgcataatatatgcaaggtccggggttcaaatcccgg 40  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  36121679 atgcataaaatatgcaaggtccggggttcaaaccccgg 36121716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 37230063 - 37230030
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaat 35  Q
    |||||||||||||||||||||| |||||||||||    
T  37230063 aatgcataatatatgcaaggtctggggttcaaat 37230030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 37495953 - 37495916
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||||||||||||||||  |||||||||||||    
T  37495953 aatgcataatatatgcaaggtccaaggttcaaatcccg 37495916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 40867055 - 40867088
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||| ||||||||||||||||||||||||    
T  40867055 caatgcatagtatatgcaaggtccggggttcaaa 40867088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 43539140 - 43539107
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||| |||||||||||||||||    
T  43539140 caatgcataatatatgtaaggtccggggttcaaa 43539107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 47342470 - 47342437
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||||||| |||||||    
T  47342470 caatgcataatatatgcaaggtccggagttcaaa 47342437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 145550 - 145590
Alignment:
Q  8 taatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||||||| ||||  |||||||    
T  145550 taatatatgcaaggtccggggttcaaaccccgaccaccacc 145590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 31
Target Start/End: Complemental strand, 394394 - 394366
Alignment:
Q  3 atgcataatatatgcaaggtccggggttc 31  Q
    |||||||||||||||||||||||||||||    
T  394394 atgcataatatatgcaaggtccggggttc 394366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 2962761 - 2962717
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    ||||||||||||||||||||| |||||||  |||||||| |||||    
T  2962761 aatgcataatatatgcaaggttcggggtttgaatcccggccacca 2962717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 5579721 - 5579765
Alignment:
Q  4 tgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||| |||||||||| ||||  |||||||    
T  5579721 tgcataatatatgcaaggtctggggttcaaaccccgaccaccacc 5579765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6781832 - 6781872
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccgga 41  Q
    |||||||||| ||||||||||||| ||||||||| ||||||    
T  6781832 caatgcataaaatatgcaaggtccagggttcaaaccccgga 6781872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20243280 - 20243328
Alignment:
Q  1 caatgcataata-tatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||| ||||||||||||||||||  || |||||||||||||    
T  20243280 caatgcataataatatgcaaggtccggggtttgaaccccggacaccacc 20243328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 26717963 - 26717931
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||| |||||||||    
T  26717963 aatgcataatatatgcaaggtccagggttcaaa 26717931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 34
Target Start/End: Complemental strand, 45046246 - 45046218
Alignment:
Q  6 cataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||||||||||    
T  45046246 cataatatatgcaaggtccggggttcaaa 45046218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 46371007 - 46371039
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||| ||||||||||||||||||    
T  46371007 aatgcataatatatccaaggtccggggttcaaa 46371039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 46418558 - 46418522
Alignment:
Q  7 ataatatatgcaaggtccggggttcaaatcccggaca 43  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  46418558 ataatatatgcaaagtccggggttcaaaccccggaca 46418522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 25728003 - 25727956
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  25728003 caatgcataatatatgcaaggtccggggttcaaatcccgaccaccacc 25727956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 38130995 - 38130948
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||    
T  38130995 caatgcataatatatgcaaggtccggggttcaaaccccggccaccacc 38130948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 48849799 - 48849753
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  48849799 caatgcataatatatgcaaggtccggggttcaaaccccggccaccac 48849753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 48315059 - 48315022
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48315059 aatgcataatatatgcaaggtccggggttcaaatcccg 48315022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 40575645 - 40575609
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcc 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  40575645 caatgcataatatatgcaaggtccggggttcaaatcc 40575609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4601869 - 4601916
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||| ||||||||||||||||||||| ||||| |||||||    
T  4601869 caatgcataataaatgcaaggtccggggttcaaaccccggccaccacc 4601916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16793010 - 16792963
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  16793010 caatgcataatatatgcaaggtccagggttcaaaccccggtcaccacc 16792963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 25340960 - 25340913
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||| ||||||||||||||||||||||| ||||| |||||||    
T  25340960 caatgcataaaatatgcaaggtccggggttcaaaccccggccaccacc 25340913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 45334214 - 45334261
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||| ||||||||||||||||  |||||||    
T  45334214 caatgcataatatatgcaaggttcggggttcaaatcccgaccaccacc 45334261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 25441536 - 25441490
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||||    
T  25441536 caatgcataatatatgcaaggtctggggttcaaaccccggccaccac 25441490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28130970 - 28130924
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||    
T  28130970 caatgcataatatatgcaaggtctggggtttgaatcccggacaccac 28130924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32909337 - 32909291
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  32909337 caatgcataaaatatgcaaggtcctgggttcaaatcccggccaccac 32909291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34899122 - 34899160
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  34899122 caatgcataatatatgcaaggtccggggttcaaaccccg 34899160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 45431973 - 45432019
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||||||||||||||| || || ||||||    
T  45431973 caatgcataatatatgcaaggtccggggttcaaaccctggccaccac 45432019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 53996324 - 53996370
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||||    
T  53996324 caatgcataatatatgcaaggtctggggttcgaatcccggccaccac 53996370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 55066635 - 55066589
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||| |||| |||||||||||||||| |||||||    
T  55066635 aatgcataatatatgcatggtctggggttcaaatcccggccaccacc 55066589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 334882 - 334837
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||| ||||||||||||||||||||||| ||||| ||||||    
T  334882 aatgcataaaatatgcaaggtccggggttcaaaccccggccaccac 334837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 913636 - 913603
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  913636 caatgcataatatatgcaaggtccggggttcaaa 913603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 14771357 - 14771402
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||| | ||||| |||||||||||||||    
T  14771357 aatgcataatatatgcaaggtctgaggttcgaatcccggacaccac 14771402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19468476 - 19468521
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  19468476 caatgcataatatatgcaaggtccgtggttcgaatccgggacacca 19468521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 35126304 - 35126263
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggaca 43  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  35126304 aatgcataatatatgcaagatctggggttcaaatcccggaca 35126263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 37921033 - 37920988
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||    
T  37921033 aatgcataatatatgcaatgtctgcggttcaaatcccggacaccac 37920988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 41817524 - 41817557
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  41817524 caatgcataatatatgcaaggtccggggttcaaa 41817557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 48656935 - 48656902
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  48656935 caatgcataatatatgcaaggtccggggttcaaa 48656902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 51614235 - 51614280
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||    
T  51614235 aatgcaaaatatatgcaaggtccgaggttcgaatcccggacaccac 51614280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 977977 - 977941
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcc 37  Q
    |||||||||||||||||||||||||| ||||||||||    
T  977977 caatgcataatatatgcaaggtccggagttcaaatcc 977941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 16663271 - 16663239
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||||||||||||||    
T  16663271 aatgcataatatatgcaaggtccggggttcaaa 16663239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 47099070 - 47099034
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatccc 38  Q
    ||||||||||||||||||||| |||||||||||||||    
T  47099070 aatgcataatatatgcaaggttcggggttcaaatccc 47099034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 53365940 - 53365976
Alignment:
Q  12 atatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||||||||| |||||||    
T  53365940 atatgcaaggtccggggttcaaatcccggccaccacc 53365976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 10926494 - 10926541
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||| ||||||||||||  ||| |||||||    
T  10926494 caatgcataatatatgcaaggttcggggttcaaatgtcggccaccacc 10926541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11358259 - 11358306
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||| ||||||||||||||| ||||||||||||| ||||| |||||||    
T  11358259 caattcataatatatgcaagatccggggttcaaaccccggccaccacc 11358306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 25505737 - 25505691
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||| ||||||| || |||||||||||||    
T  25505737 caatgcataatatatgcaaggtctggggttcgaa-cccggacaccacc 25505691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 29631211 - 29631258
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||| |||| |||||| ||||| |||||||    
T  29631211 caatgcataatatatgcaaggttcgggattcaaaccccggccaccacc 29631258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 916464 - 916510
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||||||    
T  916464 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 916510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 7464527 - 7464489
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  7464527 caatgcataatatatgtaaggtccggggttcaaaccccg 7464489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8075810 - 8075856
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||| | |||||||| ||||| ||||||    
T  8075810 caatgcataatatatgcaaggtctgaggttcaaaccccggccaccac 8075856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8113598 - 8113552
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||| |||| ||||| |||||||| ||||||    
T  8113598 caatgcataatatatgcaagatccgcggttcgaatcccggccaccac 8113552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8238589 - 8238635
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||| ||||||||||  |||| ||||||    
T  8238589 caatgcataatatatgcaaggtctggggttcaaactccggccaccac 8238635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 10922344 - 10922306
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  10922344 caatgcataatatatgcaagatccggggttcaaaccccg 10922306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14160314 - 14160272
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggaca 43  Q
    ||||||||||||||||||| ||||||||||| || ||||||||    
T  14160314 caatgcataatatatgcaaagtccggggttcgaaccccggaca 14160272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 20906515 - 20906469
Alignment:
Q  3 atgcataat-atatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||| ||||||||||||||||||||||| ||| |||||||||    
T  20906515 atgcataattatatgcaaggtccggggttcaaaccccagacaccacc 20906469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 22251495 - 22251449
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||| |||||||||||| || ||||| |||||||    
T  22251495 aatgcataatatatgcacggtccggggttcgaaccccggccaccacc 22251449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 28266741 - 28266771
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttc 31  Q
    |||||||||||||||||||||||||||||||    
T  28266741 caatgcataatatatgcaaggtccggggttc 28266771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32843298 - 32843252
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| |||||||||||| |||||||||| ||||| ||||||    
T  32843298 caatgcataaaatatgcaaggtctggggttcaaaccccggccaccac 32843252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44075192 - 44075146
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||||||    
T  44075192 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 44075146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 48796254 - 48796208
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||| ||||||||||| ||||| ||||||    
T  48796254 caatgcataagatatgcaaggttcggggttcaaaccccggccaccac 48796208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 51882236 - 51882190
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||| ||| ||||||||| ||||| ||||||    
T  51882236 caatgcataatatatgcaagatccagggttcaaaccccggccaccac 51882190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 7626497 - 7626464
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||| |||||||||||||||||||||||    
T  7626497 caatgcataaaatatgcaaggtccggggttcaaa 7626464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28965813 - 28965768
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    |||||||||||||||| ||||| ||||||||||| ||||| |||||    
T  28965813 caatgcataatatatgtaaggttcggggttcaaaccccggtcacca 28965768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 39779049 - 39779082
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||| |||||||||||    
T  39779049 caatgcataatatatgcaaggttcggggttcaaa 39779082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 46226061 - 46226016
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    |||||||||||||||||||||||||| |||| || |||| ||||||    
T  46226061 caatgcataatatatgcaaggtccggagttcgaaccccgaacacca 46226016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 49975841 - 49975808
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  49975841 caatgcataatatatgcaaggtctggggttcaaa 49975808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 52119401 - 52119446
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    |||||||||||||||||||||| |||||||| || ||||| |||||    
T  52119401 caatgcataatatatgcaaggttcggggttcgaaccccggccacca 52119446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 4332702 - 4332670
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||| ||||||||||||||||||    
T  4332702 aatgcataatatatccaaggtccggggttcaaa 4332670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7738694 - 7738726
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaa 33  Q
    |||||||||| ||||||||||||||||||||||    
T  7738694 caatgcataaaatatgcaaggtccggggttcaa 7738726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8747272 - 8747228
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacc 45  Q
    |||||||||||||||| |||||||||||||| ||| |||| ||||    
T  8747272 caatgcataatatatgtaaggtccggggttcgaataccggccacc 8747228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 17218519 - 17218559
Alignment:
Q  4 tgcataatatatgcaaggtccggggttcaaatcccggacac 44  Q
    |||||| ||||||||||| |||||||||||| |||||||||    
T  17218519 tgcatattatatgcaagggccggggttcaaaccccggacac 17218559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35191853 - 35191809
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacc 45  Q
    ||||||||||||||||||||||| ||||||| || ||| ||||||    
T  35191853 caatgcataatatatgcaaggtctggggttcgaaccccagacacc 35191809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 35347330 - 35347298
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||| ||||||||||    
T  35347330 aatgcataatatatgcaaggtctggggttcaaa 35347298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 38798891 - 38798923
Alignment:
Q  7 ataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||||||||||| |||||||||||||    
T  38798891 ataatatatgcaaggtccgaggttcaaatcccg 38798923  T

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Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 75350 - 75396
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||    
T  75350 caatgcataatatatgcaaggtccggggttcgaatcccggccaccac 75396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8569734 - 8569780
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  8569734 caatgcataatatatgcaaggtccggggttcaaaccccggccaccac 8569780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 12184534 - 12184579
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||    
T  12184534 aatgcataatatatgcaaggtccgtggttcaaatcccggccaccac 12184579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 12215778 - 12215813
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatc 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  12215778 caatgcataatatatgcaaggtccggggttcaaatc 12215813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16204826 - 16204779
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||| |||||||||||||||||||||||||||  |||||||    
T  16204826 caatgcataatgtatgcaaggtccggggttcaaatcccgaccaccacc 16204779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2726453 - 2726407
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||||||||||| || ||||| ||||||    
T  2726453 caatgcataatatatgcaaggtccggggttcgaaccccggtcaccac 2726407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4450287 - 4450333
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||||||||||| |||| ||| ||||||    
T  4450287 caatgcataatatatgcaaggtccggggttcgaatctcggtcaccac 4450333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29740507 - 29740553
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||| ||||||||||||||||||| ||||| ||||||    
T  29740507 caatgcataatatacgcaaggtccggggttcaaaccccggccaccac 29740553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 10497005 - 10496961
Alignment:
Q  3 atgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  10497005 atgcataatatatgcaaggtctggggttcaaat-ccggacaccacc 10496961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 33824906 - 33824939
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  33824906 caatgcataatatatgcaaggtccggggttcaaa 33824939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 34
Target Start/End: Original strand, 291394 - 291425
Alignment:
Q  3 atgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||    
T  291394 atgcataatatatgcaaggtccggggttcaaa 291425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 655785 - 655746
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccgg 40  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  655785 caatgcataatatatgcaaggtccggggttcgaaccccgg 655746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 9333756 - 9333803
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||| ||||||||||||||||||||| ||||| ||| |||||||    
T  9333756 caatgcattatatatgcaaggtccggggtttaaatctcggccaccacc 9333803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 14049920 - 14049873
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||||||| | ||||||||| |||| |||||||    
T  14049920 caatgcataatatatgcaaggtctgaggttcaaattccggccaccacc 14049873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 21847219 - 21847266
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||| ||||||||||||||||| |||||||| |||||||| |||||||    
T  21847219 caatacataatatatgcaaggtacggggttcgaatcccggccaccacc 21847266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 28231461 - 28231430
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttca 32  Q
    ||||||||||||||||||||||||||||||||    
T  28231461 caatgcataatatatgcaaggtccggggttca 28231430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 28758326 - 28758279
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||||||||||||| ||||| |||||||| |||| ||||||||    
T  28758326 caatgcataatatatgcaaagtccgaggttcaaaccccgaacaccacc 28758279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 33976269 - 33976308
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccgg 40  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  33976269 caatgcataaaatatgcaaggtccggggttcaaaccccgg 33976308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 247684 - 247730
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||||||    
T  247684 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 247730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8916510 - 8916464
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||| ||||||||||||||||||||| ||||||||| ||| ||||||    
T  8916510 caatacataatatatgcaaggtccggagttcaaatctcggccaccac 8916464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 9111072 - 9111102
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttc 31  Q
    |||||||||||||||||||||||||||||||    
T  9111072 caatgcataatatatgcaaggtccggggttc 9111102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13496141 - 13496179
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  13496141 caatgcataatatatgcaaggtccggagttcaaaccccg 13496179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 14429159 - 14429125
Alignment:
Q  6 cataatatatgcaaggtccggggttcaaatcccgg 40  Q
    ||||| |||||||||||||||||||||||||||||    
T  14429159 cataaaatatgcaaggtccggggttcaaatcccgg 14429125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15187088 - 15187126
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  15187088 caatgcataatatatgcaaggtccgaggttcaaaccccg 15187126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15473518 - 15473480
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  15473518 caatgcataatatatgcaaggtccgaggttcaaaccccg 15473480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20744163 - 20744201
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  20744163 caatgcataatatatgcaaggtctggggttcaaaccccg 20744201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24373746 - 24373700
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||| |||||||||| ||| | ||||||    
T  24373746 caatgcataatatatgcaaggtcaggggttcaaaccccagccaccac 24373700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26587417 - 26587463
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||| | |||||| |||||||| ||||||    
T  26587417 caatgcataatatatgcaaggttctgggttcgaatcccggccaccac 26587463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 27907986 - 27907940
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    ||||||||| |||||||||||| |||||||||| ||||| |||||||    
T  27907986 aatgcataaaatatgcaaggtctggggttcaaaccccggccaccacc 27907940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32193895 - 32193849
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    |||||||||||||||||||||| || |||||||||||| | ||||||    
T  32193895 caatgcataatatatgcaaggtacgaggttcaaatccccgccaccac 32193849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 34481450 - 34481412
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccg 39  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  34481450 caatgcattatatatgcaaggtccggggttcaaaccccg 34481412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 8629732 - 8629699
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||| |||||||||||    
T  8629732 caatgcataatatatgcaaggttcggggttcaaa 8629699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 8637473 - 8637440
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||| ||||||||    
T  8637473 caatgcataatatatgcaaggtccgaggttcaaa 8637440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 14750193 - 14750149
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||    
T  14750193 aatgcataatatatgcaaggtcc-gggtttaaatcccggccaccac 14750149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 15155760 - 15155793
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  15155760 caatgcataatatatgcaaggtctggggttcaaa 15155793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 16390454 - 16390487
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||| |||||||||||||||||    
T  16390454 caatgcataatatatgtaaggtccggggttcaaa 16390487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 18253375 - 18253342
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||||| |||||||||    
T  18253375 caatgcataatatatgcaaggtccagggttcaaa 18253342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 19265560 - 19265527
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||| |||||||||||||||||||||||    
T  19265560 caatgcataaaatatgcaaggtccggggttcaaa 19265527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 21029401 - 21029368
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaat 35  Q
    ||||||||||||||||||||| ||||||||||||    
T  21029401 aatgcataatatatgcaaggttcggggttcaaat 21029368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 26356117 - 26356084
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||| |||||||||||    
T  26356117 caatgcataatatatgcaaggttcggggttcaaa 26356084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 31971554 - 31971587
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||| ||||||||    
T  31971554 caatgcataatatatgcaaggtccgaggttcaaa 31971587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 8639072 - 8639104
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||| ||||||||||||||||||||||||    
T  8639072 aatgcatagtatatgcaaggtccggggttcaaa 8639104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 8831232 - 8831264
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaa 33  Q
    ||||||||||| |||||||||||||||||||||    
T  8831232 caatgcataatttatgcaaggtccggggttcaa 8831264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 9977083 - 9977115
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||| ||||||||||    
T  9977083 aatgcataatatatgcaaggtctggggttcaaa 9977115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28898881 - 28898925
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacc 45  Q
    |||||||||||||||| ||||||||| ||||||| ||||| ||||    
T  28898881 caatgcataatatatgaaaggtccggagttcaaaccccggccacc 28898925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 30639461 - 30639417
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    |||||||||||||||||||||| | ||||| |||| |||||||||    
T  30639461 aatgcataatatatgcaaggtctgaggttcgaatctcggacacca 30639417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 53810 - 53767
Alignment:
Q  4 tgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  53810 tgcataatacatgcaaggtccggggttcgaatcccggacaccac 53767  T

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Target: scaffold1619 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1619
Description:

Target: scaffold1619; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1056 - 1102
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||||||| |||||| ||| ||||||||    
T  1056 caatgcataatatatgcaaggtccgggattcaaaccccagacaccac 1102  T

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Target: scaffold0066 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17529 - 17575
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||||    
T  17529 caatgcataatatatgcaaggtttggggttcgaatcccggacaccac 17575  T

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Target: scaffold1127 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1127
Description:

Target: scaffold1127; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 1201 - 1168
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  1201 caatgcataatatatgcaaggtccggggttcaaa 1168  T

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Target: scaffold0154 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 37560 - 37605
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    |||||||||| |||||||||||||||||||| |||||||| |||||    
T  37560 caatgcataaaatatgcaaggtccggggttcgaatcccggccacca 37605  T

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Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 48672 - 48717
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    ||||||||||||||||||| ||||||| |||||| |||||||||||    
T  48672 caatgcataatatatgcaaagtccgggattcaaaccccggacacca 48717  T

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Target: scaffold0238 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 25414 - 25461
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacaccacc 48  Q
    |||||||||||||||||||||||| |||||| || ||| |||||||||    
T  25414 caatgcataatatatgcaaggtccagggttcgaaccccagacaccacc 25461  T

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Target: scaffold0143 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 4491 - 4530
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccgg 40  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  4491 caatgcataatttatgcaaggtccagggttcaaatcccgg 4530  T

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Target: scaffold0038 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 31958 - 31927
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttca 32  Q
    ||||||||||||||||||||||||||||||||    
T  31958 caatgcataatatatgcaaggtccggggttca 31927  T

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Target: scaffold0524 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1259 - 1304
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    ||||||||||| |||  ||||||||||||||||||||||| |||||    
T  1259 caatgcataatctatataaggtccggggttcaaatcccggccacca 1304  T

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Target: scaffold0168 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 9429 - 9474
Alignment:
Q  2 aatgcataatatatgcaaggtccggggttcaaatcccggacaccac 47  Q
    ||||||||| |||||||||||| ||| |||||||||||| ||||||    
T  9429 aatgcataaaatatgcaaggtctgggattcaaatcccggccaccac 9474  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 42370 - 42337
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  42370 caatgcataatatatgcaaggtctggggttcaaa 42337  T

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Target: scaffold0028 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 72811 - 72778
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    |||||||||||||||||||||||| |||||||||    
T  72811 caatgcataatatatgcaaggtccagggttcaaa 72778  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 99062 - 99095
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaa 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  99062 caatgcataatatatgcaaggtctggggttcaaa 99095  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 185288 - 185333
Alignment:
Q  1 caatgcataatatatgcaaggtccggggttcaaatcccggacacca 46  Q
    |||||||||| ||||||||| ||||||||||||| ||||| |||||    
T  185288 caatgcataaaatatgcaagatccggggttcaaaccccggtcacca 185333  T

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