View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2261_high_17 (Length: 345)

Name: NF2261_high_17
Description: NF2261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2261_high_17
NF2261_high_17
[»] chr7 (30 HSPs)
chr7 (6-263)||(36193170-36193427)
chr7 (279-345)||(11975504-11975570)
chr7 (281-345)||(6694744-6694808)
chr7 (281-345)||(29710319-29710383)
chr7 (280-343)||(27576607-27576670)
chr7 (279-345)||(11975655-11975721)
chr7 (279-345)||(27280823-27280889)
chr7 (260-345)||(42312736-42312822)
chr7 (281-343)||(44294048-44294110)
chr7 (281-342)||(27280886-27280947)
chr7 (281-345)||(41666358-41666422)
chr7 (279-343)||(42313007-42313071)
chr7 (279-342)||(3198268-3198331)
chr7 (291-342)||(44293989-44294040)
chr7 (260-345)||(3198449-3198535)
chr7 (279-343)||(29710377-29710441)
chr7 (281-345)||(31453056-31453120)
chr7 (257-340)||(40951863-40951947)
chr7 (279-345)||(6694588-6694653)
chr7 (281-343)||(27280613-27280675)
chr7 (285-342)||(4048205-4048262)
chr7 (284-345)||(6694533-6694594)
chr7 (316-345)||(29019342-29019371)
chr7 (316-345)||(42313065-42313094)
chr7 (282-342)||(6069278-6069338)
chr7 (281-345)||(11975715-11975779)
chr7 (313-345)||(26185974-26186006)
chr7 (313-345)||(27576545-27576577)
chr7 (279-343)||(29710536-29710600)
chr7 (282-342)||(30869677-30869737)
[»] chr6 (21 HSPs)
chr6 (6-263)||(5054071-5054328)
chr6 (281-345)||(9982944-9983008)
chr6 (281-345)||(10356260-10356324)
chr6 (279-345)||(21598660-21598726)
chr6 (279-343)||(17136901-17136965)
chr6 (281-345)||(35225397-35225461)
chr6 (261-343)||(17136822-17136905)
chr6 (279-345)||(21598502-21598568)
chr6 (279-345)||(24059722-24059788)
chr6 (283-345)||(35050855-35050917)
chr6 (285-345)||(9982673-9982733)
chr6 (279-343)||(9982727-9982791)
chr6 (281-345)||(21598720-21598784)
chr6 (279-345)||(17342655-17342721)
chr6 (281-345)||(10356536-10356600)
chr6 (281-345)||(21598444-21598508)
chr6 (279-345)||(10356318-10356384)
chr6 (279-345)||(10356476-10356542)
chr6 (315-343)||(364214-364242)
chr6 (262-345)||(24059647-24059728)
chr6 (282-342)||(35225458-35225518)
[»] chr8 (28 HSPs)
chr8 (19-191)||(27670664-27670835)
chr8 (281-345)||(24909678-24909742)
chr8 (285-345)||(41151681-41151741)
chr8 (281-343)||(20209536-20209598)
chr8 (281-343)||(20229244-20229306)
chr8 (279-345)||(41151462-41151528)
chr8 (281-342)||(6220460-6220521)
chr8 (281-345)||(6220182-6220246)
chr8 (281-345)||(41151404-41151468)
chr8 (285-340)||(9400106-9400161)
chr8 (291-342)||(20209477-20209528)
chr8 (291-342)||(20229185-20229236)
chr8 (279-342)||(36053064-36053127)
chr8 (279-345)||(24909618-24909684)
chr8 (279-345)||(27052465-27052531)
chr8 (279-340)||(27052613-27052674)
chr8 (281-345)||(9399815-9399879)
chr8 (313-345)||(9400041-9400073)
chr8 (279-343)||(24827414-24827478)
chr8 (297-345)||(27127949-27127997)
chr8 (279-342)||(27128092-27128156)
chr8 (285-340)||(38414597-38414652)
chr8 (279-345)||(6220397-6220463)
chr8 (279-345)||(15563901-15563967)
chr8 (280-342)||(36052893-36052955)
chr8 (284-345)||(27052668-27052729)
chr8 (296-345)||(41151620-41151669)
chr8 (279-343)||(6220240-6220304)
[»] chr4 (39 HSPs)
chr4 (279-345)||(45038390-45038456)
chr4 (264-345)||(21322044-21322126)
chr4 (281-345)||(11884614-11884679)
chr4 (279-343)||(2470124-2470188)
chr4 (283-342)||(55617568-55617627)
chr4 (283-342)||(55624872-55624931)
chr4 (279-345)||(41083111-41083177)
chr4 (284-345)||(2788168-2788229)
chr4 (279-340)||(40395156-40395217)
chr4 (285-342)||(50290415-50290472)
chr4 (281-345)||(7245991-7246055)
chr4 (273-345)||(24369278-24369350)
chr4 (281-345)||(41083053-41083117)
chr4 (282-345)||(7246298-7246361)
chr4 (279-345)||(7246049-7246115)
chr4 (279-345)||(12498677-12498743)
chr4 (258-331)||(25056184-25056258)
chr4 (279-345)||(40147176-40147242)
chr4 (281-335)||(41083338-41083392)
chr4 (280-345)||(12498894-12498959)
chr4 (281-345)||(9999288-9999352)
chr4 (279-343)||(12498836-12498900)
chr4 (285-345)||(25055884-25055944)
chr4 (285-345)||(40146955-40147015)
chr4 (281-345)||(40395313-40395377)
chr4 (262-345)||(45038450-45038534)
chr4 (285-345)||(53863532-53863592)
chr4 (282-345)||(2469899-2469962)
chr4 (282-345)||(2788108-2788171)
chr4 (285-339)||(45787311-45787365)
chr4 (279-345)||(53863374-53863440)
chr4 (279-343)||(2787944-2788006)
chr4 (316-345)||(17236808-17236837)
chr4 (280-340)||(50290181-50290239)
chr4 (316-345)||(51950564-51950593)
chr4 (313-345)||(2470182-2470214)
chr4 (259-342)||(40147239-40147323)
chr4 (285-345)||(41083268-41083328)
chr4 (313-345)||(46196141-46196173)
[»] chr3 (42 HSPs)
chr3 (279-343)||(36667296-36667360)
chr3 (279-343)||(47891336-47891400)
chr3 (258-345)||(25848262-25848350)
chr3 (281-345)||(39541443-39541507)
chr3 (281-345)||(47891394-47891458)
chr3 (279-345)||(25848512-25848578)
chr3 (279-345)||(28813894-28813960)
chr3 (279-345)||(40286295-40286361)
chr3 (280-345)||(36374861-36374926)
chr3 (281-342)||(47069527-47069588)
chr3 (281-345)||(26724284-26724348)
chr3 (285-345)||(46337505-46337565)
chr3 (279-343)||(47573911-47573975)
chr3 (281-345)||(50332707-50332771)
chr3 (279-345)||(14964887-14964952)
chr3 (279-345)||(25848572-25848638)
chr3 (281-343)||(26976512-26976574)
chr3 (264-345)||(40286219-40286301)
chr3 (279-345)||(46337559-46337625)
chr3 (279-345)||(47069585-47069651)
chr3 (284-345)||(13903078-13903139)
chr3 (279-340)||(32186692-32186753)
chr3 (279-340)||(50332652-50332713)
chr3 (281-345)||(18020096-18020160)
chr3 (273-332)||(47891160-47891219)
chr3 (279-345)||(252103-252169)
chr3 (279-337)||(25848344-25848402)
chr3 (281-343)||(32186461-32186523)
chr3 (281-343)||(45131438-45131500)
chr3 (281-343)||(47573694-47573756)
chr3 (282-343)||(5442515-5442576)
chr3 (281-345)||(25848632-25848697)
chr3 (316-345)||(30954959-30954988)
chr3 (316-345)||(30955020-30955049)
chr3 (316-345)||(30970771-30970800)
chr3 (316-345)||(30970832-30970861)
chr3 (279-343)||(14624104-14624167)
chr3 (279-343)||(18020038-18020102)
chr3 (281-345)||(40286521-40286585)
chr3 (313-345)||(43650210-43650242)
chr3 (279-343)||(47573752-47573816)
chr3 (291-343)||(47891118-47891170)
[»] chr5 (45 HSPs)
chr5 (279-342)||(16327316-16327379)
chr5 (285-345)||(20928090-20928150)
chr5 (279-343)||(25456332-25456396)
chr5 (281-345)||(35461435-35461499)
chr5 (279-345)||(16327155-16327221)
chr5 (291-345)||(28559304-28559358)
chr5 (265-342)||(32361150-32361228)
chr5 (281-343)||(35461712-35461774)
chr5 (262-345)||(17400821-17400905)
chr5 (282-345)||(1996202-1996265)
chr5 (283-342)||(23662156-23662215)
chr5 (283-342)||(23796373-23796432)
chr5 (279-345)||(28559450-28559516)
chr5 (284-345)||(1649345-1649406)
chr5 (284-345)||(23661881-23661942)
chr5 (284-345)||(23796628-23796689)
chr5 (281-342)||(40980710-40980771)
chr5 (285-345)||(10827380-10827440)
chr5 (279-335)||(20927902-20927958)
chr5 (292-343)||(5746323-5746374)
chr5 (282-345)||(7209848-7209911)
chr5 (279-345)||(14604122-14604189)
chr5 (284-343)||(19550101-19550160)
chr5 (284-343)||(33491728-33491786)
chr5 (281-340)||(38680629-38680688)
chr5 (279-341)||(1996371-1996433)
chr5 (279-341)||(28022166-28022228)
chr5 (279-345)||(33491569-33491635)
chr5 (279-340)||(12713106-12713167)
chr5 (279-340)||(12774370-12774431)
chr5 (313-342)||(14604283-14604312)
chr5 (285-342)||(32361231-32361288)
chr5 (279-340)||(35461655-35461716)
chr5 (282-343)||(36760814-36760875)
chr5 (316-345)||(37032972-37033001)
chr5 (286-343)||(38682821-38682878)
chr5 (281-345)||(1996141-1996205)
chr5 (279-342)||(4943117-4943181)
chr5 (282-342)||(4943239-4943299)
chr5 (281-340)||(6588091-6588148)
chr5 (285-345)||(10827319-10827379)
chr5 (281-345)||(16327097-16327161)
chr5 (256-343)||(17400518-17400605)
chr5 (281-345)||(25456275-25456338)
chr5 (281-345)||(28559510-28559574)
[»] chr2 (20 HSPs)
chr2 (284-343)||(31630127-31630186)
chr2 (279-345)||(3876952-3877018)
chr2 (281-343)||(43699455-43699517)
chr2 (279-345)||(44556582-44556648)
chr2 (280-345)||(25895190-25895255)
chr2 (279-343)||(36217219-36217281)
chr2 (284-345)||(36694528-36694589)
chr2 (273-345)||(25895130-25895202)
chr2 (281-345)||(33847707-33847771)
chr2 (264-345)||(1316017-1316098)
chr2 (279-340)||(5009392-5009453)
chr2 (281-345)||(25894964-25895028)
chr2 (282-342)||(29379910-29379970)
chr2 (279-343)||(36217160-36217223)
chr2 (282-345)||(4188622-4188685)
chr2 (257-340)||(4511627-4511710)
chr2 (281-344)||(9500904-9500967)
chr2 (279-345)||(1316092-1316158)
chr2 (279-345)||(9500962-9501028)
chr2 (316-345)||(11791813-11791842)
[»] chr1 (18 HSPs)
chr1 (279-345)||(7489956-7490022)
chr1 (279-345)||(18608635-18608701)
chr1 (281-345)||(40892573-40892637)
chr1 (282-345)||(50727646-50727709)
chr1 (279-345)||(2633370-2633436)
chr1 (279-345)||(33650615-33650681)
chr1 (279-344)||(2633538-2633603)
chr1 (280-345)||(34173316-34173381)
chr1 (281-345)||(33650675-33650739)
chr1 (285-345)||(52913034-52913094)
chr1 (313-345)||(52913170-52913202)
chr1 (282-337)||(7490019-7490074)
chr1 (279-345)||(52913196-52913263)
chr1 (285-343)||(18608855-18608913)
chr1 (279-345)||(26879615-26879681)
chr1 (281-343)||(26879677-26879739)
chr1 (281-343)||(33650397-33650459)
chr1 (260-345)||(52913365-52913451)
[»] scaffold0018 (4 HSPs)
scaffold0018 (280-345)||(161679-161744)
scaffold0018 (281-345)||(161403-161467)
scaffold0018 (279-345)||(161461-161527)
scaffold0018 (279-345)||(161619-161685)
[»] scaffold0279 (2 HSPs)
scaffold0279 (280-343)||(1211-1274)
scaffold0279 (313-345)||(1149-1181)
[»] scaffold0157 (3 HSPs)
scaffold0157 (279-345)||(21734-21800)
scaffold0157 (280-345)||(21518-21583)
scaffold0157 (279-343)||(21577-21641)


Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 6 - 263
Target Start/End: Complemental strand, 36193427 - 36193170
Alignment:
Q  6 aatttattagtattatcttggtttgttaggttgctgagcctcaagttagcggactttgcttggaggctgaagaattcattgctatgggaaagtggttgga 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36193427 aatttattagtattatcttggtttgttaggttgctgagcctcaagttagcagactttgcttggagggtgaagaattcattgctatgggaaagtggttgga 36193328  T
Q  106 gctggtatcattgatgattacttccgctgaattgattttctaaaaagtttctgaaaaaggtaggatgctctttttgcttgatacatgtactactttgcca 205  Q
    ||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36193327 gctggcatcattgatgattacttcagctgaattgattttctcaaaagtttctgaaaaaggtaggatgctctttttgcttgatacatgtactactttgcca 36193228  T
Q  206 tagtaaattggtgtaaagtaaacaagtcttatgatcatctgattttagccataattta 263  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36193227 tagtaaattggtgtaaagtaaacatgtcttatgatcatctgattttagccataattta 36193170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 11975504 - 11975570
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| ||||||||||| |||| ||| ||||||||||||||| ||||||||||||||||||    
T  11975504 aagtcctttaagtttgaggtttgtaacatattgatcctttaagttattgtggtcacacataagtcct 11975570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 6694808 - 6694744
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||||||||| |||| |||  |||||||||||||||||||||||||||||||||    
T  6694808 gtcctttaagtttgaggtttgtaacatattggtcctttaagttattttggtcacacataagtcct 6694744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 29710319 - 29710383
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||| ||||| |||| ||| |||||||||||||||||||||||| |||||||||    
T  29710319 gtcctttaagtttgacgtttgtaacagattaatcctttaagttattttggtcacatataagtcct 29710383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 343
Target Start/End: Complemental strand, 27576670 - 27576607
Alignment:
Q  280 agtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    |||||||||| ||||| ||||| |||| |||  |||||||||||||||||||||||||||||||    
T  27576670 agtcctttaagtttgacgtttgtaacagattggtcctttaagttattttggtcacacataagtc 27576607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 11975721 - 11975655
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| ||||||||||| |||  |||  |||||||||||||||| ||||||||||||||||    
T  11975721 aagtcctttaagtttgaggtttgtaactgattggtcctttaagttatttttgtcacacataagtcct 11975655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 27280889 - 27280823
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||| |||||| |||||||||   |||||||| |||||||||||||||||||| |||||||||||||    
T  27280889 aagtactttaagtttgaggttcataacaaattgatcctttaagttattttggtaacacataagtcct 27280823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 345
Target Start/End: Original strand, 42312736 - 42312822
Alignment:
Q  260 tttaggctaatttacaccaaag-tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||||||| |||||||  || |||||||| ||||||||||| || | |||  || ||||||||||||||||||||||||||||||    
T  42312736 tttaggctaaattacacctgaggtcctttaagtttgaggtttgtaatatattggtcatttaagttattttggtcacacataagtcct 42312822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 343
Target Start/End: Complemental strand, 44294110 - 44294048
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||| ||||||||||| |||| |||  |||||||| ||||||||||||||||||||||    
T  44294110 gtcctttaaatttgaggtttgtaacatattagtcctttaaattattttggtcacacataagtc 44294048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 342
Target Start/End: Complemental strand, 27280947 - 27280886
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    ||||||||| ||||||||||| ||||  || | |||||||||||||||||||||||||||||    
T  27280947 gtcctttaagtttgaggtttgtaacagcttgaccctttaagttattttggtcacacataagt 27280886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 41666422 - 41666358
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||||||||| |||| |||| ||| ||||||||||| | |||||||||||||||    
T  41666422 gtcctttaagtttgaggtttgtaacagatttgtcccttaagttatttcgatcacacataagtcct 41666358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 343
Target Start/End: Complemental strand, 42313071 - 42313007
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||||| |||||  |||| ||||||||  |||||||| ||||||||||||||||||||||    
T  42313071 aagtcctttaaatttgatatttgtaacaaattggtcctttaaattattttggtcacacataagtc 42313007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 3198268 - 3198331
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    |||| |||||| ||||||||||| ||||||||  || ||||||||||||||||| |||||||||    
T  3198268 aagttctttaagtttgaggtttgtaacaaattggtcttttaagttattttggtcccacataagt 3198331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 342
Target Start/End: Complemental strand, 44294040 - 44293989
Alignment:
Q  291 tttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||| ||||||    
T  44294040 tttgaggtttgtaacagattgatcctttaagttattttggtcacaaataagt 44293989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 345
Target Start/End: Complemental strand, 3198535 - 3198449
Alignment:
Q  260 tttaggctaatttacaccaaag-tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||||||| ||||||||||| |||||||| |||||||| |  || |||||  |  ||||||||||||||||||||| ||||||||    
T  3198535 tttaggctaaattacaccaaaggtcctttaagtttgaggtctataataaattggttatttaagttattttggtcacacctaagtcct 3198449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 29710377 - 29710441
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||||| |||||  |||| |||| |||  |||||||||||||||||||||||| ||||||    
T  29710377 aagtcctttaagtttgatatttgtaacatattggtcctttaagttattttggtcacacttaagtc 29710441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 31453120 - 31453056
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||||||||| |||| |||  |  ||||||||||||| ||||||||||||||||    
T  31453120 gtcctttaagtttgaggtttgtaacagattagttatttaagttatttttgtcacacataagtcct 31453056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 340
Target Start/End: Complemental strand, 40951947 - 40951863
Alignment:
Q  257 taatttaggctaatttacaccaaag-tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataa 340  Q
    ||||| ||||||| |||| |||| | || ||||| ||||||||||| || | ||| ||| |||||||||||||||||||||||||    
T  40951947 taattaaggctaaattacgccaacggtcgtttaagtttgaggtttgtaatagattgatcatttaagttattttggtcacacataa 40951863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 6694588 - 6694653
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| |||| |||||| || | ||| ||||||||||||||||| || |||||||||||||    
T  6694588 aagtcctttaagtttgtggtttgtaatagattgatcctttaagttatttt-gttacacataagtcct 6694653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 343
Target Start/End: Original strand, 27280613 - 27280675
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||| ||||| |||||  |||||||  |||||||||||||||| | ||||||||||||    
T  27280613 gtcctttaagtttgaagtttgttacaaattggtcctttaagttattttagccacacataagtc 27280675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 4048205 - 4048262
Alignment:
Q  285 tttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    ||||| ||||||||||| || | | | || ||||||||||||||||||||||||||||    
T  4048205 tttaagtttgaggtttgtaatagactaattctttaagttattttggtcacacataagt 4048262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 345
Target Start/End: Original strand, 6694533 - 6694594
Alignment:
Q  284 ctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||| ||||||||||| || |||||  || |||||||||||||| || ||||||||||||    
T  6694533 ctttaagtttgaggtttgtaataaattggtcttttaagttattttgttcccacataagtcct 6694594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 345
Target Start/End: Original strand, 29019342 - 29019371
Alignment:
Q  316 tttaagttattttggtcacacataagtcct 345  Q
    ||||||||||||||||||||||||||||||    
T  29019342 tttaagttattttggtcacacataagtcct 29019371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 345
Target Start/End: Complemental strand, 42313094 - 42313065
Alignment:
Q  316 tttaagttattttggtcacacataagtcct 345  Q
    ||||||||||||||||||||||||||||||    
T  42313094 tttaagttattttggtcacacataagtcct 42313065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 6069338 - 6069278
Alignment:
Q  282 tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    |||||||| ||||||||||| |||| || | || |||||||||||||| ||| ||||||||    
T  6069338 tcctttaagtttgaggtttgtaacatatatgtcatttaagttattttgatcaaacataagt 6069278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 11975779 - 11975715
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| |||||| |||| |||| |||  |||||||||||||||| || ||| |||||||||    
T  11975779 gtcctttaagtttgagatttgaaacagattggtcctttaagttatttttgtaacagataagtcct 11975715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 26186006 - 26185974
Alignment:
Q  313 tcctttaagttattttggtcacacataagtcct 345  Q
    |||||||| ||||||||||||||||||||||||    
T  26186006 tcctttaaattattttggtcacacataagtcct 26185974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 27576577 - 27576545
Alignment:
Q  313 tcctttaagttattttggtcacacataagtcct 345  Q
    ||||||| |||||||||||||||||||||||||    
T  27576577 tcctttaggttattttggtcacacataagtcct 27576545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 343
Target Start/End: Complemental strand, 29710600 - 29710536
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||| ||||| |||||| |||| |||  |||  |||||||||||||||| ||||||||||||||    
T  29710600 aagtcatttaagtttgagatttgtaacggattggtcctttaagttattttcgtcacacataagtc 29710536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 30869737 - 30869677
Alignment:
Q  282 tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    |||||||| ||||||||||| ||   |||  ||||||||||||||||||||| ||||||||    
T  30869737 tcctttaagtttgaggtttgtaattgattggtcctttaagttattttggtcatacataagt 30869677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 222; Significance: 1e-122; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 6 - 263
Target Start/End: Original strand, 5054071 - 5054328
Alignment:
Q  6 aatttattagtattatcttggtttgttaggttgctgagcctcaagttagcggactttgcttggaggctgaagaattcattgctatgggaaagtggttgga 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5054071 aatttattagtattatcttggtttgttaggttgctgagcctcaagttaccagactttgcttggaggctgaagaattcattgctatgggaaagtggttgga 5054170  T
Q  106 gctggtatcattgatgattacttccgctgaattgattttctaaaaagtttctgaaaaaggtaggatgctctttttgcttgatacatgtactactttgcca 205  Q
    ||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5054171 gctggcatcattgatgattacttctgctgaattgattttctcaaaagtttctgaaaaaggtaggatgctctttttgcttgatacatgtactactttgcca 5054270  T
Q  206 tagtaaattggtgtaaagtaaacaagtcttatgatcatctgattttagccataattta 263  Q
    | |||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||    
T  5054271 tggtaaattggtgtgaagtaaacatgtcttatgatcatctgattttagccagaattta 5054328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 9983008 - 9982944
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||    
T  9983008 gtcctttaagtttgaggattgtaacaaattgatcctttaagttattttggtcacacataagtcct 9982944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 10356260 - 10356324
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||||||||| ||||||||  |||||||| ||||||||||||||||||||||||    
T  10356260 gtcctttaagtttgaggtttgtaacaaattagtcctttaaattattttggtcacacataagtcct 10356324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 21598726 - 21598660
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| |||| |||||| |||| |||  |||||||||||||||||||||||||||||||||    
T  21598726 aagtcctttaagtttgtggtttgtaacatattggtcctttaagttattttggtcacacataagtcct 21598660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 17136901 - 17136965
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||| ||||| ||||||||||| |||| ||| || |||||||||||||||||||||||||||||    
T  17136901 aagtcatttaagtttgaggtttgtaacagattaattctttaagttattttggtcacacataagtc 17136965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 35225397 - 35225461
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||||||||| ||||||||  ||||||||||||||||||||| |||||| ||||    
T  35225397 gtcctttaagtttgaggtttgtaacaaattggtcctttaagttattttggtcatacataaatcct 35225461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 343
Target Start/End: Original strand, 17136822 - 17136905
Alignment:
Q  261 ttaggctaatttacaccaaag-tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||| |||||||| || |||||||| ||||||||||| || | |||  |||||||||||||||||||| ||||||||||    
T  17136822 ttaggctaaattacaccagaggtcctttaaatttgaggtttgtaatagattagtcctttaagttattttggtctcacataagtc 17136905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 21598502 - 21598568
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| ||||||||||| |||| |||  ||||||||||||||||| || ||||||||||||    
T  21598502 aagtcctttaagtttgaggtttgtaacagattggtcctttaagttattttgatcccacataagtcct 21598568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 24059722 - 24059788
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| ||||||||||  |||| ||| ||| ||||| ||||||||||||||||||||||||    
T  24059722 aagtcctttaagtttgaggtttataacagattgatcatttaaattattttggtcacacataagtcct 24059788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 35050917 - 35050855
Alignment:
Q  283 cctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||| ||||||||||| || ||||| |||||||||||||||| |||||| ||||||||||    
T  35050917 cctttaagtttgaggtttgtaataaattgatcctttaagttatttaggtcacgcataagtcct 35050855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 9982673 - 9982733
Alignment:
Q  285 tttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| ||||||||||| |||| ||| ||||||||| |||||||| |||||||||||||||    
T  9982673 tttaagtttgaggtttgtaacatattcatcctttaaattattttgatcacacataagtcct 9982733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 9982727 - 9982791
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||||| |||||| |||| |||| ||| ||||||| ||||||||||||| ||||||||||    
T  9982727 aagtcctttaagtttgagttttgtaacagattgatcctttgagttattttggtcgcacataagtc 9982791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 21598784 - 21598720
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||||||||| |||| |||  ||||||||||||||||| || ||||||||||||    
T  21598784 gtcctttaagtttgaggtttgtaacagattggtcctttaagttattttgttctcacataagtcct 21598720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 17342721 - 17342655
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| ||||| ||||||||||| ||||  ||  ||||||||||||||| |||||||||||||||||    
T  17342721 aagtcttttaagtttgaggtttgtaacatgttggtcctttaagttatttcggtcacacataagtcct 17342655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 10356600 - 10356536
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||| ||||| |||| |||  ||||||| ||||||||||| |||||||||||||    
T  10356600 gtcctttaagtttgacgtttgtaacagattggtcctttaggttattttggtaacacataagtcct 10356536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 21598444 - 21598508
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||||||||  |||| |||  |||||||||||||||||||  ||||||||||||    
T  21598444 gtcctttaagtttgaggtttataacagattggtcctttaagttattttggttgcacataagtcct 21598508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 10356318 - 10356384
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| |||||  |||| |||| |||  | |||||||||||||||||||||| ||||||||    
T  10356318 aagtcctttaagtttgatatttgtaacagattggttctttaagttattttggtcacacttaagtcct 10356384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 10356542 - 10356476
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| |||||| |||| |||| |||  || ||||||||||||| | ||||||||||||||    
T  10356542 aagtcctttaagtttgagatttgtaacagattggtcttttaagttatttttgccacacataagtcct 10356476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 343
Target Start/End: Complemental strand, 364242 - 364214
Alignment:
Q  315 ctttaagttattttggtcacacataagtc 343  Q
    |||||||||||||||||||||||||||||    
T  364242 ctttaagttattttggtcacacataagtc 364214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 345
Target Start/End: Original strand, 24059647 - 24059728
Alignment:
Q  262 taggctaatttacaccaaagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| || ||||||||  ||||||||| ||||||||||| |||| ||| ||  ||||||||| ||||| | ||||||||||||    
T  24059647 taggccaaattacaccagggtcctttaagtttgaggtttgtaacatattgat--tttaagttactttggccccacataagtcct 24059728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 342
Target Start/End: Original strand, 35225458 - 35225518
Alignment:
Q  282 tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    |||||||| ||| ||||||| |||| |||  |||||||||||||| || ||||||||||||    
T  35225458 tcctttaagtttaaggtttgtaacagattggtcctttaagttattctgatcacacataagt 35225518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 7e-37; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 27670664 - 27670835
Alignment:
Q  19 tatcttggtttgttaggttgctgagcctcaagttagcggactttgcttggaggctgaagaattcattgctatgggaaagtggttggagctggtatcattg 118  Q
    ||||||||||||||||||| ||||||| ||||||||  ||||  || |||||| |||||||||||||  |||| ||||||||||||||||||||||||      
T  27670664 tatcttggtttgttaggttactgagccccaagttagtagact--gcatggaggttgaagaattcatttttatgagaaagtggttggagctggtatcatcc 27670761  T
Q  119 atgattacttccgctgaattgattttctaaaaagtttctgaaaaa-ggtaggatgctctttttgcttgatacat 191  Q
    ||||||||||| ||| |||||| ||||| |||| ||||||||||| ||||| ||||| |||||||||| |||||    
T  27670762 atgattacttctgctaaattgaatttctcaaaattttctgaaaaagggtagaatgctttttttgcttgctacat 27670835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 24909742 - 24909678
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| |||||| |||| ||||||||  ||||||||||||||||| |||||||||||||||    
T  24909742 gtcctttaagtttgagatttgtaacaaattggtcctttaagttattttgatcacacataagtcct 24909678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 285 - 345
Target Start/End: Complemental strand, 41151741 - 41151681
Alignment:
Q  285 tttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| ||||||||||| |||| |||  |||||||||||||||||||||||||||||||||    
T  41151741 tttaagtttgaggtttgtaacagattagtcctttaagttattttggtcacacataagtcct 41151681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 343
Target Start/End: Complemental strand, 20209598 - 20209536
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||| ||||||||||| |||| |||  |||||||| ||||||||||||||||||||||    
T  20209598 gtcctttaaatttgaggtttgtaacatattagtcctttaaattattttggtcacacataagtc 20209536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 343
Target Start/End: Complemental strand, 20229306 - 20229244
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||| ||||||||||| |||| |||  |||||||| ||||||||||||||||||||||    
T  20229306 gtcctttaaatttgaggtttgtaacatattagtcctttaaattattttggtcacacataagtc 20229244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 41151462 - 41151528
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| |||||| || | |||| |||  |||||||||||||||||||||||||||||||||    
T  41151462 aagtcctttaagtttgagtttagtaacagattggtcctttaagttattttggtcacacataagtcct 41151528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 342
Target Start/End: Complemental strand, 6220521 - 6220460
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    ||||||||| ||||||||||| ||||||||  | |||||||||||||| |||||||||||||    
T  6220521 gtcctttaagtttgaggtttgtaacaaattggttctttaagttatttttgtcacacataagt 6220460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 6220182 - 6220246
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||||||||| ||||||||  |||||||||||||||| || ||| |||||||||    
T  6220182 gtcctttaagtttgaggtttgaaacaaattggtcctttaagttatttttgtaacagataagtcct 6220246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 41151404 - 41151468
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| |||||| |||| |||| |||  ||||||||||||||||| |||||||||||||||    
T  41151404 gtcctttaagtttgagttttgtaacatattggtcctttaagttattttgatcacacataagtcct 41151468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 340
Target Start/End: Complemental strand, 9400161 - 9400106
Alignment:
Q  285 tttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataa 340  Q
    ||||| ||||||||||| |||| ||| ||| |||||||||||||||||||||||||    
T  9400161 tttaagtttgaggtttgtaacatattgatcgtttaagttattttggtcacacataa 9400106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 342
Target Start/End: Complemental strand, 20209528 - 20209477
Alignment:
Q  291 tttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||| ||||||    
T  20209528 tttgaggtttgtaacagattgatcctttaagttattttggtcacaaataagt 20209477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 342
Target Start/End: Complemental strand, 20229236 - 20229185
Alignment:
Q  291 tttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||| ||||||    
T  20229236 tttgaggtttgtaacagattgatcctttaagttattttggtcacaaataagt 20229185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 36053127 - 36053064
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    ||||| ||||| ||||||||||| || | ||| ||||||||||||||||| |||||||||||||    
T  36053127 aagtcatttaaatttgaggtttgtaaaatattgatcctttaagttattttagtcacacataagt 36053064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 24909684 - 24909618
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| ||||||||||| | || |||  |||||||| ||||||||||||| ||||||||||    
T  24909684 aagtcctttaagtttgaggtttgtagcagattggtcctttaaattattttggtcacgcataagtcct 24909618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 27052465 - 27052531
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| ||||| ||| ||||||| |||| |||  ||||||||||||||| |||||||||||||||||    
T  27052465 aagtcatttaagtttaaggtttgtaacacattggtcctttaagttatttcggtcacacataagtcct 27052531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 27052674 - 27052613
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataa 340  Q
    ||||||||||| ||||||||||  |||| |||  ||||||||||||||||| ||||||||||    
T  27052674 aagtcctttaagtttgaggtttataacagattggtcctttaagttattttgatcacacataa 27052613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 9399815 - 9399879
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||||||||| |||| |||  | |||||||||| ||||||||||| ||||||||    
T  9399815 gtcctttaagtttgaggtttgtaacatattggttctttaagttactttggtcacacgtaagtcct 9399879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 9400073 - 9400041
Alignment:
Q  313 tcctttaagttattttggtcacacataagtcct 345  Q
    |||||||||||||||||||||||||||||||||    
T  9400073 tcctttaagttattttggtcacacataagtcct 9400041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 24827414 - 24827478
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||||| ||||| ||||| || | |||| || ||||||||||||| ||||||||||||||    
T  24827414 aagtcctttaagtttgatgtttgtaatagatttgtcatttaagttattttagtcacacataagtc 24827478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 27127949 - 27127997
Alignment:
Q  297 gtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| |||| ||| || |||||||||||||||||||||||||||||||    
T  27127949 gtttgtaacagattgattctttaagttattttggtcacacataagtcct 27127997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 27128156 - 27128092
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatccttt-aagttattttggtcacacataagt 342  Q
    ||||||||||| ||| ||||||  |||||||| ||| ||| ||||||||||||||||||||||||    
T  27128156 aagtcctttaagtttaaggtttctaacaaattgatctttttaagttattttggtcacacataagt 27128092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 340
Target Start/End: Original strand, 38414597 - 38414652
Alignment:
Q  285 tttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataa 340  Q
    ||||| ||||||||||| |||| ||||||| ||||| |||||||| ||||||||||    
T  38414597 tttaaatttgaggtttgtaacatatttatcatttaatttattttgatcacacataa 38414652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 6220463 - 6220397
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||| |||||| |||||| |||| |||| |||  | |||||||||||| ||||||||||||||||||    
T  6220463 aagttctttaagtttgagatttgtaacagattggtactttaagttattgtggtcacacataagtcct 6220397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 15563901 - 15563967
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| ||||| ||||||| ||| |||| ||| || ||| ||||||||||||||| |||||||||||    
T  15563901 aagtcttttaagtttgagggttgtaacatattaatacttaaagttattttggtcatacataagtcct 15563967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 36052893 - 36052955
Alignment:
Q  280 agtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    |||||||||| ||||| |||| ||||| ||| ||| |||| |||||||||||||||| |||||    
T  36052893 agtcctttaagtttgaagtttacaacagattgatcatttatgttattttggtcacacgtaagt 36052955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 27052729 - 27052668
Alignment:
Q  284 ctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||| ||||||||||| || | ||| || |||||||||||||| ||| ||||||||||||    
T  27052729 ctttaagtttgaggtttgtaatagattgattctttaagttatttttgtcgcacataagtcct 27052668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 41151669 - 41151620
Alignment:
Q  296 ggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||| |||| |||  ||||||||||| |||||||||||||||||||||    
T  41151669 ggtttgtaacagattggtcctttaagttcttttggtcacacataagtcct 41151620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 6220240 - 6220304
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||||| ||||||||||| |||  |||  || ||||||| ||||| ||||||||||||||    
T  6220240 aagtcctttaagtttgaggtttgtaactgattggtcatttaagtaatttttgtcacacataagtc 6220304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 9e-18; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 45038456 - 45038390
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| ||||||||||| |||| |||  |||||||||||||||||||||||||||||||||    
T  45038456 aagtcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacacataagtcct 45038390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 345
Target Start/End: Complemental strand, 21322126 - 21322044
Alignment:
Q  264 ggctaatttacaccaa-agtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||| ||||||||  |||||||||| ||||||||||| |||| |||| || |||||||||||||||||||| |||||||||    
T  21322126 ggctaaattacaccatgagtcctttaagtttgaggtttgtaacacatttttcttttaagttattttggtcacatataagtcct 21322044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 11884614 - 11884679
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcc-tttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||||||||| |||||||| |||| ||||||||||||| ||||||||||||||||    
T  11884614 gtcctttaaatttgaggtttgtaacaaattaatccttttaagttatttttgtcacacataagtcct 11884679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 343
Target Start/End: Complemental strand, 2470188 - 2470124
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||||| ||||||||||| || | |||  |||||||||||||||||||||||||||||||    
T  2470188 aagtcctttaaatttgaggtttgtaatatattggtcctttaagttattttggtcacacataagtc 2470124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 342
Target Start/End: Complemental strand, 55617627 - 55617568
Alignment:
Q  283 cctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    ||||||| |||||||||||||||| |||| || ||||||||||||| |||||||||||||    
T  55617627 cctttaagtttgaggtttgcaacatatttgtcttttaagttattttagtcacacataagt 55617568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 342
Target Start/End: Complemental strand, 55624931 - 55624872
Alignment:
Q  283 cctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    ||||||| |||||||||||||||| |||| || ||||||||||||| |||||||||||||    
T  55624931 cctttaagtttgaggtttgcaacatatttgtcttttaagttattttagtcacacataagt 55624872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 41083111 - 41083177
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| ||||| ||||| |||| |||  ||||||||||||||||| |||||||||||||||    
T  41083111 aagtcctttaagtttgaagtttgtaacatattggtcctttaagttattttgatcacacataagtcct 41083177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 2788229 - 2788168
Alignment:
Q  284 ctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||| ||||||||||| |||||||| ||  ||||||||||||||||||||||||| ||||    
T  2788229 ctttaagtttgaggtttgtaacaaattgatattttaagttattttggtcacacataaatcct 2788168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 40395156 - 40395217
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataa 340  Q
    ||||||||||| ||||||||||| |||| |||  | ||||||||||||||||||||||||||    
T  40395156 aagtcctttaagtttgaggtttgtaacatattagttctttaagttattttggtcacacataa 40395217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 50290472 - 50290415
Alignment:
Q  285 tttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    ||||| ||||||||||| || ||||| ||| |||||||||||||||||||||||||||    
T  50290472 tttaagtttgaggtttgtaataaattgatcatttaagttattttggtcacacataagt 50290415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 7245991 - 7246055
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||| ||||| ||||  || |||||||||||||||||||||| |||||||||||    
T  7245991 gtcctttaagtttgacgtttgtaacaggttgatcctttaagttattttggtcagacataagtcct 7246055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 345
Target Start/End: Complemental strand, 24369350 - 24369278
Alignment:
Q  273 acaccaaagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| || |||||||| ||||||||||| || | |||| |||||||||||||||| ||||||| ||||||||    
T  24369350 acacctaattcctttaagtttgaggtttgtaatagatttgtcctttaagttattttagtcacacctaagtcct 24369278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 41083053 - 41083117
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||||||||| |||| ||| ||| ||||||||||||| |||||| |||||||||    
T  41083053 gtcctttaagtttgaggtttgtaacatattgatcatttaagttatttttgtcacatataagtcct 41083117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 7246361 - 7246298
Alignment:
Q  282 tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||||| ||||||||||| |||| |||  || |||||||||||||||||| |||||||||||    
T  7246361 tcctttaagtttgaggtttgtaacatattggtcttttaagttattttggtcatacataagtcct 7246298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 7246049 - 7246115
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| |||||  |||| ||||||||  || |||||||||||||||| |||||||||||||    
T  7246049 aagtcctttaagtttgatatttgtaacaaattggtcgtttaagttattttggttacacataagtcct 7246115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 12498677 - 12498743
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| ||||| ||| |||||||||| | ||| ||| ||||||||||||||||||||||||| ||||    
T  12498677 aagtcttttaagtttaaggtttgcaatatattgatcttttaagttattttggtcacacataaatcct 12498743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 25056258 - 25056184
Alignment:
Q  258 aatttaggctaatttacaccaa-agtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggt 331  Q
    |||||||||||| ||||||||  |||| ||||| ||||||||||| ||||||||  || ||||||||||||||||    
T  25056258 aatttaggctaaattacaccaggagtcttttaagtttgaggtttgtaacaaattggtcttttaagttattttggt 25056184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 40147242 - 40147176
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||| |||||| ||||||||||| |||||||| | |||||||||||||||  ||||| |||||||||    
T  40147242 aagttctttaagtttgaggtttgtaacaaattgaccctttaagttatttttctcacatataagtcct 40147176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 41083392 - 41083338
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcaca 335  Q
    ||||||||| ||||||||||| |||| |||  |||||||||||||||||||||||    
T  41083392 gtcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcaca 41083338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 12498959 - 12498894
Alignment:
Q  280 agtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||||||| ||||||||||| || | ||| ||| |||||||||||||  |||||||||||||||    
T  12498959 agtcctttaagtttgaggtttgtaatagattgatcatttaagttattttaatcacacataagtcct 12498894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 9999288 - 9999352
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| | ||||||||| |||| |||||||||||| ||| || || |||||||||||||||    
T  9999288 gtcctttaagtctgaggtttgtaacagatttatcctttaggttgttctgatcacacataagtcct 9999352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 343
Target Start/End: Complemental strand, 12498900 - 12498836
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||||| |||||| |||| |||| | | ||||||||| |||||| |||||||||||||||    
T  12498900 aagtcctttaagtttgagatttgtaacagactaatcctttaaattatttcggtcacacataagtc 12498836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 25055884 - 25055944
Alignment:
Q  285 tttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| ||||||||||| || | |||| ||||||||||||||||||| |||||||| ||||    
T  25055884 tttaagtttgaggtttgtaatagatttgtcctttaagttattttggtgacacataaatcct 25055944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 40146955 - 40147015
Alignment:
Q  285 tttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| |||||||||||  | | |||| || ||||||||||||||||||||||||||||||    
T  40146955 tttaagtttgaggtttgtgatagatttgtcatttaagttattttggtcacacataagtcct 40147015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 40395377 - 40395313
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| ||| ||||||||||| |||| |||  |||||||||||||||  ||||||||||||||||    
T  40395377 gtcctctaaatttgaggtttgtaacagattagtcctttaagttatttctgtcacacataagtcct 40395313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 345
Target Start/End: Complemental strand, 45038534 - 45038450
Alignment:
Q  262 taggctaatttacaccaaag-tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||||| ||||||||| | |||||||| ||||||||||| || | |||  || ||||||||||||| |||||| |||||||||    
T  45038534 taggctaaattacaccaatgatcctttaagtttgaggtttgtaatagattggtcatttaagttatttttgtcacaaataagtcct 45038450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 345
Target Start/End: Complemental strand, 53863592 - 53863532
Alignment:
Q  285 tttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| ||||||| ||| ||||||||  |||||||||||||||||||||  ||||||||||    
T  53863592 tttaagtttgagggttgtaacaaattggtcctttaagttattttggtcatgcataagtcct 53863532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 2469899 - 2469962
Alignment:
Q  282 tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||||| ||||||||||| || | |||  | |||||||||||||||||||||| ||||||||    
T  2469899 tcctttaagtttgaggtttgtaatagattggttctttaagttattttggtcacacctaagtcct 2469962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 2788171 - 2788108
Alignment:
Q  282 tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||||| ||| ||||||| || ||||| ||||||||||| |||||||||| | |||||||||    
T  2788171 tcctttaagtttaaggtttgtaaaaaattgatcctttaagtcattttggtcagagataagtcct 2788108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 339
Target Start/End: Complemental strand, 45787365 - 45787311
Alignment:
Q  285 tttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacata 339  Q
    ||||| ||||||||||| || ||||| ||  ||||||||||||||||||||||||    
T  45787365 tttaagtttgaggtttgtaataaattgattttttaagttattttggtcacacata 45787311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 53863374 - 53863440
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| ||||| || ||| |||| |||| |||  |||||||||||||||| ||||||||||||||||    
T  53863374 aagtcatttaagttcgagatttgtaacagattggtcctttaagttattttagtcacacataagtcct 53863440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 2787944 - 2788006
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||| ||||| ||| ||||||| |||| |||| |  ||||||||||||||||||||||||||||    
T  2787944 aagtcatttaagtttaaggtttgtaacatatttgt--tttaagttattttggtcacacataagtc 2788006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 345
Target Start/End: Original strand, 17236808 - 17236837
Alignment:
Q  316 tttaagttattttggtcacacataagtcct 345  Q
    ||||||||||||||||||||||||||||||    
T  17236808 tttaagttattttggtcacacataagtcct 17236837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 50290181 - 50290239
Alignment:
Q  280 agtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataa 340  Q
    |||||||||| |||||||||||  |||||||  |  |||||||||||||||||||||||||    
T  50290181 agtcctttaagtttgaggtttgttacaaattggt--tttaagttattttggtcacacataa 50290239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 345
Target Start/End: Original strand, 51950564 - 51950593
Alignment:
Q  316 tttaagttattttggtcacacataagtcct 345  Q
    ||||||||||||||||||||||||||||||    
T  51950564 tttaagttattttggtcacacataagtcct 51950593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 2470214 - 2470182
Alignment:
Q  313 tcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||||||||||||||| |||||||||    
T  2470214 tcctttaagttattttggtcacatataagtcct 2470182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 40147323 - 40147239
Alignment:
Q  259 atttaggctaatttacaccaa-agtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    ||||||| ||| ||||||| | |||||||||| ||||||||||  || |||||  || |||||||  ||||||||||||||||||    
T  40147323 atttaggttaaattacaccgatagtcctttaagtttgaggtttataataaattggtcatttaagtcgttttggtcacacataagt 40147239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 345
Target Start/End: Complemental strand, 41083328 - 41083268
Alignment:
Q  285 tttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| ||||||||| | |||| |||  || |||||||||||| |||||||||||||||||    
T  41083328 tttaagtttgaggttcgtaacagattggtcttttaagttatttcggtcacacataagtcct 41083268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 46196141 - 46196173
Alignment:
Q  313 tcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||||||||||||||| |||||||||    
T  46196141 tcctttaagttattttggtcacaaataagtcct 46196173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 343
Target Start/End: Complemental strand, 36667360 - 36667296
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||||| ||| ||||||| |||| |||| |||||||||||||||||||||||||||||||    
T  36667360 aagtcctttaagtttaaggtttgtaacagatttgtcctttaagttattttggtcacacataagtc 36667296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 343
Target Start/End: Complemental strand, 47891400 - 47891336
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||| | |||||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  47891400 aagtcctttgagtttgaggtttgcaacatattggtcctttaagttattttggtcacacataagtc 47891336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 25848262 - 25848350
Alignment:
Q  258 aatttaggctaatttacaccaaag-tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||| | ||| |||||||| || |||||||| |||||| |||| || ||||| |||||||||||||||||||||||||| |||||||    
T  25848262 aatttatgttaaattacaccagagatcctttaagtttgagatttgtaataaattgatcctttaagttattttggtcacacacaagtcct 25848350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 39541507 - 39541443
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||||||||| |||  ||| |||||||||||||||||||||||| |||||||||    
T  39541507 gtcctttaagtttgaggtttgtaacggattgatcctttaagttattttggtcacatataagtcct 39541443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 47891458 - 47891394
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| |||||  |||| |||||||| |||||||||||||||||| |||||||||||||||    
T  47891458 gtcctttaagtttgaaatttgtaacaaattgatcctttaagttattttgatcacacataagtcct 47891394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 25848578 - 25848512
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| ||| ||||||| |||| |||  ||||||||||||||||||||||||||| |||||    
T  25848578 aagtcctttaaattttaggtttgtaacacattggtcctttaagttattttggtcacacatatgtcct 25848512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 28813894 - 28813960
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||| |||||| |||||| |||| || ||||| ||| ||||||||||||||||||||||||||||||    
T  28813894 aagttctttaagtttgagatttgtaataaattgatcatttaagttattttggtcacacataagtcct 28813960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 40286295 - 40286361
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| ||||||||||  |||| |||  ||||||||||||||||||||||||| |||||||    
T  40286295 aagtcctttaagtttgaggtttataacatattgttcctttaagttattttggtcacacagaagtcct 40286361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 36374861 - 36374926
Alignment:
Q  280 agtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||||||| ||||||||||||||||||||  |||||||| | |||||||||||| |||| ||||    
T  36374861 agtcctttaagtttgaggtttgcaacaaattagtcctttaaataattttggtcacaaataaatcct 36374926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 47069527 - 47069588
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    ||||||||| ||||||||||| |||| |||  ||||||||||||||||| ||||||||||||    
T  47069527 gtcctttaaatttgaggtttgtaacatattggtcctttaagttattttgatcacacataagt 47069588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 26724348 - 26724284
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||||||||| || | ||| || |||||||||||||| ||||||||||||||||    
T  26724348 gtcctttaagtttgaggtttgtaatagattgattctttaagttattttcgtcacacataagtcct 26724284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 46337505 - 46337565
Alignment:
Q  285 tttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| ||||||||||| |||| ||| || |||||| ||||||||||||||||||||||||    
T  46337505 tttaagtttgaggtttgtaacatattgattctttaaattattttggtcacacataagtcct 46337565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 343
Target Start/End: Complemental strand, 47573975 - 47573911
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||| ||||| ||||||||||| || | ||| |||||||||||||||||||||||| |||||||    
T  47573975 aagtcttttaagtttgaggtttgtaatagattgatcctttaagttattttggtcacatataagtc 47573911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 50332771 - 50332707
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||| ||||| || ||||| ||| |||||||||||||||| |||||||||||||    
T  50332771 gtcctttaagtttgatgtttgtaataaattgatcttttaagttattttggttacacataagtcct 50332707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 14964887 - 14964952
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| |||||| |||| |||| |||  || ||||||||||||||||||||||||||||||    
T  14964887 aagtcctttaagtttgag-tttgtaacagattggtcatttaagttattttggtcacacataagtcct 14964952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 25848638 - 25848572
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||||| || ||||||||||| || ||||| ||| |||||||||||||  |||||||||||||||    
T  25848638 aagtccttaaagtttgaggtttgtaataaattgatcttttaagttattttaatcacacataagtcct 25848572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 343
Target Start/End: Complemental strand, 26976574 - 26976512
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||| |||||| |||| |||| ||   |||||||||||||||||||||||||||||||    
T  26976574 gtcctttaagtttgagctttgtaacatataagtcctttaagttattttggtcacacataagtc 26976512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 345
Target Start/End: Original strand, 40286219 - 40286301
Alignment:
Q  264 ggctaatttacacca-aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||||||  ||||| || || ||||| ||||| ||||||||  ||||| ||||||||||| |||||||||||||||    
T  40286219 ggctaatttacaccggaagtctttaaagtttgatgtttgtaacaaattagtccttcaagttattttgatcacacataagtcct 40286301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 46337559 - 46337625
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| ||||| ||||| |||| ||| || ||||||||||||||||||||| |||| ||||    
T  46337559 aagtcctttaagtttgaagtttgtaacatattaattctttaagttattttggtcacagataaatcct 46337625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 47069585 - 47069651
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||| |||||| |||||| |||| ||||||||  | |||| ||||||||||||||||||||||||||    
T  47069585 aagttctttaagtttgagttttgtaacaaattggttcttttagttattttggtcacacataagtcct 47069651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 13903139 - 13903078
Alignment:
Q  284 ctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||| ||||||||||| |||| ||| ||||||||||||||||||||  ||||||| ||||    
T  13903139 ctttaaatttgaggtttgtaacatattaatcctttaagttattttggttgcacataaatcct 13903078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 32186753 - 32186692
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataa 340  Q
    ||||||||||| ||||||||||| |||| ||| ||  |||||||||||||||| ||||||||    
T  32186753 aagtcctttaagtttgaggtttgtaacatattgatgttttaagttattttggttacacataa 32186692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 50332713 - 50332652
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataa 340  Q
    ||||||||||| |||||||||||  ||||||| ||||| ||||||||||| | |||||||||    
T  50332713 aagtcctttaagtttgaggtttgttacaaattaatcctctaagttatttttgccacacataa 50332652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 18020160 - 18020096
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||||||||| || | ||| ||  |||||||||||||||||| |||||||||||    
T  18020160 gtcctttaagtttgaggtttgtaatagattgattatttaagttattttggtcaaacataagtcct 18020096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 47891160 - 47891219
Alignment:
Q  273 acaccaaagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtc 332  Q
    ||||| ||||| ||||| ||||||||||| | || ||| |||||||||||||||||||||    
T  47891160 acacctaagtcatttaagtttgaggtttgtaccagattgatcctttaagttattttggtc 47891219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 252103 - 252169
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| ||| ||||||| |||| ||   || |||||||||||||||||||| |||||||||    
T  252103 aagtcctttaagtttaaggtttgtaacagatcagtcttttaagttattttggtcacaaataagtcct 252169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 25848344 - 25848402
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacaca 337  Q
    ||||||||||| ||||||||||| || | |||  ||| |||||||||||||||||||||    
T  25848344 aagtcctttaagtttgaggtttgtaatagattagtccgttaagttattttggtcacaca 25848402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 343
Target Start/End: Original strand, 32186461 - 32186523
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||| ||||||||||| || | |||  ||||||||| |||||||||||||| ||||||    
T  32186461 gtcctttaagtttgaggtttgtaatatattggtcctttaagctattttggtcacacctaagtc 32186523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 343
Target Start/End: Original strand, 45131438 - 45131500
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||| ||||||||||| |||| ||| ||| ||||||||||||| || ||| |||||||    
T  45131438 gtcctttaagtttgaggtttgtaacagattgatcatttaagttatttttgtaacatataagtc 45131500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 343
Target Start/End: Original strand, 47573694 - 47573756
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||| ||||||||||| |||| |||  |||||||| |||||||  |||||||||||||    
T  47573694 gtcctttaagtttgaggtttgtaacatattagtcctttaaattatttttatcacacataagtc 47573756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 343
Target Start/End: Original strand, 5442515 - 5442576
Alignment:
Q  282 tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    |||||||| ||||||||||| ||   |||  ||||||||||||||||||||||| |||||||    
T  5442515 tcctttaagtttgaggtttgtaaatgattcgtcctttaagttattttggtcacagataagtc 5442576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 25848697 - 25848632
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatccttt-aagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||||||||  || |||||  |||||| ||||||||||||| |||||||||||||    
T  25848697 gtcctttaagtttgaggtttataataaattggtccttttaagttattttggtaacacataagtcct 25848632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 345
Target Start/End: Complemental strand, 30954988 - 30954959
Alignment:
Q  316 tttaagttattttggtcacacataagtcct 345  Q
    ||||||||||||||||||||||||||||||    
T  30954988 tttaagttattttggtcacacataagtcct 30954959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 345
Target Start/End: Complemental strand, 30955049 - 30955020
Alignment:
Q  316 tttaagttattttggtcacacataagtcct 345  Q
    ||||||||||||||||||||||||||||||    
T  30955049 tttaagttattttggtcacacataagtcct 30955020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 345
Target Start/End: Complemental strand, 30970800 - 30970771
Alignment:
Q  316 tttaagttattttggtcacacataagtcct 345  Q
    ||||||||||||||||||||||||||||||    
T  30970800 tttaagttattttggtcacacataagtcct 30970771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 345
Target Start/End: Complemental strand, 30970861 - 30970832
Alignment:
Q  316 tttaagttattttggtcacacataagtcct 345  Q
    ||||||||||||||||||||||||||||||    
T  30970861 tttaagttattttggtcacacataagtcct 30970832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 14624104 - 14624167
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||||| ||||||||||  |||| ||| | | |||||||| |||||||||||||||||||    
T  14624104 aagtcctttaagtttgaggtttataacagattaaacatttaagtt-ttttggtcacacataagtc 14624167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 343
Target Start/End: Complemental strand, 18020102 - 18020038
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||||| ||| ||||||  |||| |||  || |||||||||||||||| |||||||||||    
T  18020102 aagtcctttaagtttaaggtttataacagattggtcgtttaagttattttggttacacataagtc 18020038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 40286585 - 40286521
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||||||||| |||   || |||||||||||||||||  || ||||||||||||    
T  40286585 gtcctttaaatttgaggtttgtaaccgtttgatcctttaagttatttttatcgcacataagtcct 40286521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 43650242 - 43650210
Alignment:
Q  313 tcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||||||||||| |||||||||||||    
T  43650242 tcctttaagttattttggtaacacataagtcct 43650210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 47573752 - 47573816
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||| ||||| ||||||||||| |||| ||| ||||||||| ||||||||| | | ||||||||    
T  47573752 aagtcttttaagtttgaggtttgtaacatattgatcctttaaattattttggccgctcataagtc 47573816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 343
Target Start/End: Original strand, 47891118 - 47891170
Alignment:
Q  291 tttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||||| |||| ||| ||| ||||| ||||||||||||||| ||||||    
T  47891118 tttgaggtttgtaacagattgatcttttaaattattttggtcacacctaagtc 47891170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 16327379 - 16327316
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    ||||||||||| ||||||||||| |||| ||| |||||||||||||||||||||||| ||||||    
T  16327379 aagtcctttaagtttgaggtttgtaacagattgatcctttaagttattttggtcacaaataagt 16327316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 285 - 345
Target Start/End: Complemental strand, 20928150 - 20928090
Alignment:
Q  285 tttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| ||||||||||  |||| |||| |||||||||||||||||||||||||||||||||    
T  20928150 tttaactttgaggtttataacagatttgtcctttaagttattttggtcacacataagtcct 20928090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 25456332 - 25456396
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||||| ||||||||||| |||| |||  ||||||||||||||||||||||| |||||||    
T  25456332 aagtcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataagtc 25456396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 35461435 - 35461499
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||||||||| || | |||  |||||||||||||||||||||||||||||||||    
T  35461435 gtcctttaagtttgaggtttgtaatatattggtcctttaagttattttggtcacacataagtcct 35461499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 16327155 - 16327221
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| ||||||||||| |||| |||  || |||||||||||||||| |||||||||||||    
T  16327155 aagtcctttaagtttgaggtttgtaacagattggtcgtttaagttattttggtaacacataagtcct 16327221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 345
Target Start/End: Original strand, 28559304 - 28559358
Alignment:
Q  291 tttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| |||| |||  |||||||||||||||||||||||||||||||||    
T  28559304 tttgaggtttgtaacagattggtcctttaagttattttggtcacacataagtcct 28559358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 342
Target Start/End: Original strand, 32361150 - 32361228
Alignment:
Q  265 gctaatttacacca-aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    ||||| |||||||| ||||||||||| ||||| ||||| || | ||| ||| |||||||||||||||||||||||||||    
T  32361150 gctaaattacaccagaagtcctttaaatttgaagtttgtaatagattgatcatttaagttattttggtcacacataagt 32361228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 343
Target Start/End: Complemental strand, 35461774 - 35461712
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||| ||||||||||| || | |||  |||||||||||||||||||||||||||||||    
T  35461774 gtcctttaagtttgaggtttgtaatagattggtcctttaagttattttggtcacacataagtc 35461712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 345
Target Start/End: Complemental strand, 17400905 - 17400821
Alignment:
Q  262 taggctaatttacacca-aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||| ||| |||||||| ||||||||||| |||||| |||| |||| |||  || |||||||||||||| |||||||||||||||    
T  17400905 taggttaaattacaccataagtcctttaagtttgagatttgtaacatattggtcatttaagttattttgatcacacataagtcct 17400821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 1996202 - 1996265
Alignment:
Q  282 tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||||| |||| |||||| || | |||  |||||||||||||||||||||||||||||||||    
T  1996202 tcctttaagtttggggtttgtaatagattagtcctttaagttattttggtcacacataagtcct 1996265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 342
Target Start/End: Complemental strand, 23662215 - 23662156
Alignment:
Q  283 cctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    ||||||| ||||||||||| || |||||  ||||||||||||||||||| ||||||||||    
T  23662215 cctttaagtttgaggtttgtaataaattggtcctttaagttattttggttacacataagt 23662156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 342
Target Start/End: Original strand, 23796373 - 23796432
Alignment:
Q  283 cctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    ||||||| ||||||||||| || |||||  ||||||||||||||||||| ||||||||||    
T  23796373 cctttaagtttgaggtttgtaataaattggtcctttaagttattttggttacacataagt 23796432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 28559516 - 28559450
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| ||||||||||  |||| |||  |||||||| ||||||| ||||||||||||||||    
T  28559516 aagtcctttaagtttgaggtttataacagattggtcctttaaattattttagtcacacataagtcct 28559450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 1649406 - 1649345
Alignment:
Q  284 ctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||| ||||||||||| |||| ||| |||| ||||||||||||| |||| ||||||||||    
T  1649406 ctttaagtttgaggtttgtaacagattgatccattaagttattttgatcactcataagtcct 1649345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 345
Target Start/End: Original strand, 23661881 - 23661942
Alignment:
Q  284 ctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||| ||||| ||||| |||| ||| ||| |||||||||||||||| |||||||||||||    
T  23661881 ctttaaatttgacgtttgtaacagattgatcttttaagttattttggttacacataagtcct 23661942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 23796689 - 23796628
Alignment:
Q  284 ctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||| ||||| ||||| |||| ||| ||| |||||||||||||||| |||||||||||||    
T  23796689 ctttaaatttgacgtttgtaacagattgatcttttaagttattttggttacacataagtcct 23796628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 342
Target Start/End: Original strand, 40980710 - 40980771
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    ||||||||| ||||||||||| || | ||| ||| |||||||||||||| ||||||||||||    
T  40980710 gtcctttaagtttgaggtttgtaatagattgatcatttaagttattttgatcacacataagt 40980771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 345
Target Start/End: Complemental strand, 10827440 - 10827380
Alignment:
Q  285 tttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| ||||||||||| || |||||  ||||||||||| |||||||||| ||||||||||    
T  10827440 tttaagtttgaggtttgtaataaattggtcctttaagttgttttggtcactcataagtcct 10827380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 335
Target Start/End: Original strand, 20927902 - 20927958
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcaca 335  Q
    ||||||||||| ||||||||||| || |||||  || ||||||||||||||||||||    
T  20927902 aagtcctttaaatttgaggtttgtaataaattggtcatttaagttattttggtcaca 20927958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 5746374 - 5746323
Alignment:
Q  292 ttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    |||||||||| |||||||| ||| ||||| |||||||||||| |||||||||    
T  5746374 ttgaggtttgtaacaaattaatcttttaaattattttggtcatacataagtc 5746323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 7209848 - 7209911
Alignment:
Q  282 tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||||  ||||||||||| || ||||   || ||||||||||||||||||||||||||||||    
T  7209848 tcctttatgtttgaggtttgtaataaatacgtcatttaagttattttggtcacacataagtcct 7209911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 14604122 - 14604189
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaa-gttattttggtcacacataagtcct 345  Q
    ||||||||||| ||||||||||| |||| ||| ||| ||| | ||||||||||||||| |||||||||    
T  14604122 aagtcctttaagtttgaggtttgtaacagattgatcattttatgttattttggtcacatataagtcct 14604189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 19550101 - 19550160
Alignment:
Q  284 ctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    |||||| ||||||||||| || | ||| || ||||||||||||||||| |||||||||||    
T  19550101 ctttaagtttgaggtttgtaatagattgattctttaagttattttggtgacacataagtc 19550160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 33491786 - 33491728
Alignment:
Q  284 ctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    |||||| ||||| |||||||||||||| ||| || |||||||||||||||||||| ||||    
T  33491786 ctttaagtttgaagtttgcaacaaattgatcatt-aagttattttggtcacacatgagtc 33491728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 38680629 - 38680688
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataa 340  Q
    ||||||||| ||||| ||||| || | ||| | |||||||||||||||||||||||||||    
T  38680629 gtcctttaagtttgaagtttgtaatagattgaccctttaagttattttggtcacacataa 38680688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 341
Target Start/End: Complemental strand, 1996433 - 1996371
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataag 341  Q
    ||||||||||| ||||||||||| || | |||  |||||||| ||||||||||||| ||||||    
T  1996433 aagtcctttaagtttgaggtttgtaagagattgttcctttaaattattttggtcactcataag 1996371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 341
Target Start/End: Complemental strand, 28022228 - 28022166
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataag 341  Q
    |||| |||||| ||||||||||  || ||||| ||| ||||||||||||||||||| ||||||    
T  28022228 aagttctttaagtttgaggtttataataaattgatcatttaagttattttggtcacgcataag 28022166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 33491569 - 33491635
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| ||| ||||||| ||  ||||  ||||||||||||||||| ||||| |||||||||    
T  33491569 aagtcctttaagtttaaggtttgtaatcaattagtcctttaagttattttgatcacagataagtcct 33491635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 12713167 - 12713106
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataa 340  Q
    ||||||||||| |||||| |||  |||| ||| ||| ||||||||||||||||||| |||||    
T  12713167 aagtcctttaagtttgagatttctaacatattgatcttttaagttattttggtcacgcataa 12713106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 12774431 - 12774370
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataa 340  Q
    ||||||||||| |||||| |||  |||| ||| ||| ||||||||||||||||||| |||||    
T  12774431 aagtcctttaagtttgagatttctaacatattgatcttttaagttattttggtcacgcataa 12774370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 342
Target Start/End: Complemental strand, 14604312 - 14604283
Alignment:
Q  313 tcctttaagttattttggtcacacataagt 342  Q
    ||||||||||||||||||||||||||||||    
T  14604312 tcctttaagttattttggtcacacataagt 14604283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 32361231 - 32361288
Alignment:
Q  285 tttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    ||||| ||||| ||||| ||||||||  ||| ||||||||||||||||| ||||||||    
T  32361231 tttaagtttgaagtttgtaacaaattagtcccttaagttattttggtcatacataagt 32361288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 35461716 - 35461655
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataa 340  Q
    ||||| |||||||||||| |||| |||| ||| ||| ||||||||||||| |||||| ||||    
T  35461716 aagtcatttaattttgagatttgtaacagattgatcatttaagttatttttgtcacaaataa 35461655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 343
Target Start/End: Complemental strand, 36760875 - 36760814
Alignment:
Q  282 tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    |||||||| ||||||||||| |||| ||  ||  |||||||||||| |||||||||||||||    
T  36760875 tcctttaagtttgaggtttgtaacagatagataatttaagttatttcggtcacacataagtc 36760814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 345
Target Start/End: Complemental strand, 37033001 - 37032972
Alignment:
Q  316 tttaagttattttggtcacacataagtcct 345  Q
    ||||||||||||||||||||||||||||||    
T  37033001 tttaagttattttggtcacacataagtcct 37032972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 38682878 - 38682821
Alignment:
Q  286 ttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    |||| ||||||||||| || | ||| |||||| ||||||||||||| |||||||||||    
T  38682878 ttaagtttgaggtttgtaatagattgatccttaaagttattttggttacacataagtc 38682821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 1996141 - 1996205
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| |||||| |||| |||| ||| ||  |||||||||||||||||||| |||| ||||    
T  1996141 gtcctttaagtttgagatttgtaacagattgatattttaagttattttggtcacatataaatcct 1996205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 4943181 - 4943117
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatccttt-aagttattttggtcacacataagt 342  Q
    ||||||||||| |||||  |||  |||| ||| ||||||| ||||||||||||||||||||||||    
T  4943181 aagtcctttaagtttgaaatttataacagattgatccttttaagttattttggtcacacataagt 4943117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 4943299 - 4943239
Alignment:
Q  282 tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    |||||||| |||||||||||  | | |||  || |||||||||||||||||||||||||||    
T  4943299 tcctttaaatttgaggtttgtgatagattggtcatttaagttattttggtcacacataagt 4943239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 340
Target Start/End: Complemental strand, 6588148 - 6588091
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataa 340  Q
    ||||||||| ||||||||||| |||| ||| ||  ||||||||||||||||| |||||||    
T  6588148 gtcctttaaatttgaggtttgtaacatattgat--tttaagttattttggtcgcacataa 6588091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 345
Target Start/End: Complemental strand, 10827379 - 10827319
Alignment:
Q  285 tttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| |||||| |||| |||| ||| ||||||||| |||||||||||||| | |||||||    
T  10827379 tttaagtttgagttttgtaacagattgatcctttaaattattttggtcacaaacaagtcct 10827319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 16327097 - 16327161
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| || |||||||| || | ||| ||| ||||||||||||| ||| ||||||||||||    
T  16327097 gtcctttaagttagaggtttgtaatagattgatcgtttaagttattttagtcgcacataagtcct 16327161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 343
Target Start/End: Original strand, 17400518 - 17400605
Alignment:
Q  256 ataatttaggctaatttacaccaaag-tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    |||||||||||||| |||||| || | |||| ||| |||||||| || || |||||  | |||||||||||||| ||||||||||||||    
T  17400518 ataatttaggctaaattacactaaggatcctctaagtttgaggtgtgtaataaattggttctttaagttatttt-gtcacacataagtc 17400605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 25456275 - 25456338
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||| ||||||| |||| |||  ||||| ||||||||||| |||||||||||||||    
T  25456275 gtcctttaagttttaggtttgtaacatattggtcctt-aagttattttgatcacacataagtcct 25456338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 28559574 - 28559510
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||| ||||| ||||||||  |||||||   ||||||||||||||| |||||||    
T  28559574 gtcctttaagtttgatgtttgtaacaaattagtcctttatagtattttggtcacacacaagtcct 28559510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 31630127 - 31630186
Alignment:
Q  284 ctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    |||||| ||||||||||| |||| ||| ||||||||||||||||||||||||||||||||    
T  31630127 ctttaagtttgaggtttgtaacagattgatcctttaagttattttggtcacacataagtc 31630186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 3877018 - 3876952
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||| |||||| ||||||||||| || ||||| ||| ||||||||||||||||||||||||||||||    
T  3877018 aagttctttaaatttgaggtttgtaataaattgatcttttaagttattttggtcacacataagtcct 3876952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 343
Target Start/End: Complemental strand, 43699517 - 43699455
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||| ||||||||||| |||| ||| ||||||||| ||||||||||||||||||||||    
T  43699517 gtcctttaagtttgaggtttgtaacatattgatcctttaatttattttggtcacacataagtc 43699455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 44556582 - 44556648
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| ||||||||||| || ||||| ||||||||| |||||||| |||||||||||||||    
T  44556582 aagtcctttaagtttgaggtttgtaataaattgatcctttaacttattttgatcacacataagtcct 44556648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 25895255 - 25895190
Alignment:
Q  280 agtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||||||| ||||||||||| |||| |||  ||||||||||||||||||||||||| |||||||    
T  25895255 agtcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacacaaaagtcct 25895190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 279 - 343
Target Start/End: Complemental strand, 36217281 - 36217219
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||||| ||||||||||| |||||||| ||  ||||||||||||||||||||||||||||    
T  36217281 aagtcctttaagtttgaggtttgtaacaaattgat--tttaagttattttggtcacacataagtc 36217219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 36694589 - 36694528
Alignment:
Q  284 ctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||||||||||||||| |||| |||  |||||||| ||||||||||||||||||||||||    
T  36694589 ctttaattttgaggtttgtaacagattggtcctttaaattattttggtcacacataagtcct 36694528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 273 - 345
Target Start/End: Complemental strand, 25895202 - 25895130
Alignment:
Q  273 acaccaaagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||| |||||||||||| ||| ||||||| |||| ||| | ||||||||||||||| ||||||||||||||||    
T  25895202 acacaaaagtcctttaagtttaaggtttgtaacagattgaacctttaagttattttagtcacacataagtcct 25895130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 33847771 - 33847707
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||| ||||| |||| |||  |||||||||||||||||||||||||||||||||    
T  33847771 gtcctttaagtttgatgtttgtaacatattgttcctttaagttattttggtcacacataagtcct 33847707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 345
Target Start/End: Original strand, 1316017 - 1316098
Alignment:
Q  264 ggctaatttacaccaaagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||| ||||||||   |||||||| ||||||||||| || | ||  ||| ||||||||||||||||||||||||||||||    
T  1316017 ggctaaattacaccaggatcctttaaatttgaggtttgtaatagatagatcgtttaagttattttggtcacacataagtcct 1316098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 5009453 - 5009392
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataa 340  Q
    |||| |||||| ||||||||||| |||| ||| ||||||||||||||||| |||||||||||    
T  5009453 aagtactttaagtttgaggtttgtaacatattgatcctttaagttatttttgtcacacataa 5009392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 25894964 - 25895028
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| |||||| |||| ||||||||  |||||||||||||||||||| || |||||||||    
T  25894964 gtcctttaagtttgagatttgtaacaaattggtcctttaagttattttggtcgcatataagtcct 25895028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 29379970 - 29379910
Alignment:
Q  282 tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagt 342  Q
    |||||||| ||||| ||||| |||| |||  |||||||| |||||||||||||||||||||    
T  29379970 tcctttaagtttgacgtttgtaacatattagtcctttaaattattttggtcacacataagt 29379910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 343
Target Start/End: Complemental strand, 36217223 - 36217160
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||| ||||| ||||||||||| |||| ||| ||| ||||| ||||||||||||||||||||||    
T  36217223 aagtcttttaagtttgaggtttgtaacagattgatc-tttaaattattttggtcacacataagtc 36217160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 4188622 - 4188685
Alignment:
Q  282 tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||||| ||||| ||||| |||||||   ||| ||||||||||||||||||||| |||||||    
T  4188622 tcctttaactttgaagtttgtaacaaataactccattaagttattttggtcacacacaagtcct 4188685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 340
Target Start/End: Complemental strand, 4511710 - 4511627
Alignment:
Q  257 taatttaggctaatttacaccaaagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataa 340  Q
    |||| |||||||| |||| ||||  |||||||| ||||| ||||| |||| ||| || ||||||||||||||||| | ||||||    
T  4511710 taatataggctaaattaccccaacatcctttaagtttgaagtttgtaacagattgattctttaagttattttggttagacataa 4511627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 344
Target Start/End: Original strand, 9500904 - 9500967
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcc 344  Q
    ||||||||| ||| |||| || |||| |||  |||||||||||||||||||||||| |||||||    
T  9500904 gtcctttaagttttaggtctgtaacagattggtcctttaagttattttggtcacacttaagtcc 9500967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 1316092 - 1316158
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||  ||||||||||| |||| || | | ||||||||||||||| || ||||||||||||    
T  1316092 aagtcctttatgtttgaggtttgtaacatatatgttctttaagttattttgatcgcacataagtcct 1316158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 9500962 - 9501028
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||| |||| ||||||||||| |||| ||   | |||||||||||||| ||||||||||||||||    
T  9500962 aagtcccttaagtttgaggtttgtaacagatcgcttctttaagttattttagtcacacataagtcct 9501028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 345
Target Start/End: Complemental strand, 11791842 - 11791813
Alignment:
Q  316 tttaagttattttggtcacacataagtcct 345  Q
    ||||||||||||||||||||||||||||||    
T  11791842 tttaagttattttggtcacacataagtcct 11791813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 7489956 - 7490022
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| ||||||||||| |||| ||| ||| ||||||||||||||||||||||||| ||||    
T  7489956 aagtcctttaagtttgaggtttgtaacagattaatcatttaagttattttggtcacacataaatcct 7490022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 18608635 - 18608701
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| ||||||||||| |||| ||| || |||||||||||||||||||||| ||||||||    
T  18608635 aagtcctttaagtttgaggtttgtaacagattgattctttaagttattttggtcacacttaagtcct 18608701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 40892637 - 40892573
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||| | ||||||||||| |||| ||| ||| ||||||||||||||||||||||||||||||    
T  40892637 gtcctttgagtttgaggtttgtaacatattgatcatttaagttattttggtcacacataagtcct 40892573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 50727709 - 50727646
Alignment:
Q  282 tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||||| ||||||||||  ||||||||| || ||||||||||||| ||| ||||||||||||    
T  50727709 tcctttaagtttgaggtttctaacaaatttgtcatttaagttattttagtcgcacataagtcct 50727646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 2633436 - 2633370
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||| |||||| ||||||||||| |||| |||| | |||||||||||||| ||||| ||||||||||    
T  2633436 aagttctttaagtttgaggtttgtaacatatttgttctttaagttatttttgtcacgcataagtcct 2633370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 33650681 - 33650615
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| |||| |||||| || | |||  |||||||||||||||||||| ||||||||||||    
T  33650681 aagtcctttaactttgtggtttgtaagagattggtcctttaagttattttggtctcacataagtcct 33650615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 2633603 - 2633538
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcc 344  Q
    ||||||||||| |||||||||||  ||| |||  || |||||||||||||||||||| ||||||||    
T  2633603 aagtcctttaagtttgaggtttgtgacagattggtcatttaagttattttggtcacatataagtcc 2633538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 34173316 - 34173381
Alignment:
Q  280 agtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||||||| ||||| ||||| |||| |||  ||||||||||||||||||| ||| |||||||||    
T  34173316 agtcctttaagtttgatgtttgtaacagattggtcctttaagttattttggttacaaataagtcct 34173381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 33650739 - 33650675
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||||||| | |||| ||| ||||||||||||| |||| || ||||||||||||    
T  33650739 gtcctttaagtttgaggttcgtaacagattgatcctttaagttactttgttcccacataagtcct 33650675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 52913034 - 52913094
Alignment:
Q  285 tttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| ||||| ||||| |||| |||  |||||||||||||||||||||||||||| ||||    
T  52913034 tttaagtttgaagtttgtaacagattagtcctttaagttattttggtcacacataaatcct 52913094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 52913170 - 52913202
Alignment:
Q  313 tcctttaagttattttggtcacacataagtcct 345  Q
    |||||||||||||||||||||||||||||||||    
T  52913170 tcctttaagttattttggtcacacataagtcct 52913202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 337
Target Start/End: Original strand, 7490019 - 7490074
Alignment:
Q  282 tcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacaca 337  Q
    |||||||| ||||||||||| || | ||| ||||||||| ||||||||||||||||    
T  7490019 tcctttaagtttgaggtttgtaatagattgatcctttaaattattttggtcacaca 7490074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 52913196 - 52913263
Alignment:
Q  279 aagtcctttaattttgaggtttgcaa-caaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| ||||||||||| || || |||  |||||||||||||| | ||||||||||||||||    
T  52913196 aagtcctttaagtttgaggtttgtaaacagattggtcctttaagttattctagtcacacataagtcct 52913263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 18608913 - 18608855
Alignment:
Q  285 tttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||| ||| ||||||  ||||||||| ||||||||| ||||||| |||||||||||||    
T  18608913 tttaagtttaaggtttataacaaatttgtcctttaagctattttgatcacacataagtc 18608855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 26879681 - 26879615
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| ||||| ||||| ||||| |||| ||| |||||||||||||||||| ||||| ||| |||||    
T  26879681 aagtcttttaagtttgaagtttgaaacagattgatcctttaagttattttgatcacatatatgtcct 26879615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 343
Target Start/End: Complemental strand, 26879739 - 26879677
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||| ||||||||||| |||| |||  || |||||||||||||  |||||||||||||    
T  26879739 gtcctttaagtttgaggtttgtaacagattggtcatttaagttatttttatcacacataagtc 26879677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 343
Target Start/End: Original strand, 33650397 - 33650459
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||| ||||||||||  |||| |||  ||||||||||||||||| || ||||||||||    
T  33650397 gtcctttaagtttgaggtttataacagattggtcctttaagttattttgttcccacataagtc 33650459  T

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Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 345
Target Start/End: Complemental strand, 52913451 - 52913365
Alignment:
Q  260 tttaggctaatttacaccaa-agtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||||||| ||||||||| |||||||||| ||| ||  ||| || |||||  | |||| |||||||||| |||||||||||||||    
T  52913451 tttaggctaagttacaccaagagtcctttaagtttcagacttgtaataaattagttctttgagttattttgatcacacataagtcct 52913365  T

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Target: scaffold0018 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 4)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 161744 - 161679
Alignment:
Q  280 agtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||||||| ||||| ||||| || | ||| ||||||||||||||||||||||||||||||||||    
T  161744 agtcctttaagtttgatgtttgtaatagattgatcctttaagttattttggtcacacataagtcct 161679  T

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Target: scaffold0018; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 161403 - 161467
Alignment:
Q  281 gtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||| ||||||||||| |||| |||  |||||||| ||||||||||||||||||||||||    
T  161403 gtcctttaagtttgaggtttgtaacagattggtcctttaacttattttggtcacacataagtcct 161467  T

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Target: scaffold0018; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 161461 - 161527
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| |||||| |||| |||| |||  |||||||| ||||||| ||||||||||||||||    
T  161461 aagtcctttaagtttgagatttgtaacagattggtcctttaacttatttttgtcacacataagtcct 161527  T

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Target: scaffold0018; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 161685 - 161619
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||||||||| |||||  |||| |||| |||  ||||||| |||||||||||||||||||||||||    
T  161685 aagtcctttaaatttgatatttgtaacagattggtcctttaggttattttggtcacacataagtcct 161619  T

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Target: scaffold0279 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 343
Target Start/End: Complemental strand, 1274 - 1211
Alignment:
Q  280 agtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    |||||||||| ||||| ||||| |||| |||  |||||||||||||||||||||||||||||||    
T  1274 agtcctttaagtttgacgtttgtaacagattggtcctttaagttattttggtcacacataagtc 1211  T

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Target: scaffold0279; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 1181 - 1149
Alignment:
Q  313 tcctttaagttattttggtcacacataagtcct 345  Q
    ||||||| |||||||||||||||||||||||||    
T  1181 tcctttaggttattttggtcacacataagtcct 1149  T

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Target: scaffold0157 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 21800 - 21734
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    ||||| ||||| ||| |||||||||| | ||| ||| ||||||||||||||||||||||||| ||||    
T  21800 aagtcttttaagtttaaggtttgcaatatattgatcttttaagttattttggtcacacataaatcct 21734  T

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Target: scaffold0157; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 21518 - 21583
Alignment:
Q  280 agtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtcct 345  Q
    |||||||||| ||||||||||| || | ||| ||| |||||||||||||  |||||||||||||||    
T  21518 agtcctttaagtttgaggtttgtaatagattgatcatttaagttattttaatcacacataagtcct 21583  T

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Target: scaffold0157; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 21577 - 21641
Alignment:
Q  279 aagtcctttaattttgaggtttgcaacaaatttatcctttaagttattttggtcacacataagtc 343  Q
    ||||||||||| |||||| |||| |||| | | ||||||||| |||||| |||||||||||||||    
T  21577 aagtcctttaagtttgagatttgtaacagactaatcctttaaattatttcggtcacacataagtc 21641  T

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