View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2261_high_29 (Length: 248)
Name: NF2261_high_29
Description: NF2261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2261_high_29 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 18 - 248
Target Start/End: Original strand, 28276215 - 28276442
Alignment:
| Q |
18 |
gatatatgggctttgctctctggcaatggcagaccatatgcttcaactattacaattttaaaggatactaaatatatcaatgttggcgatgtaggacatg |
117 |
Q |
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| T |
28276215 |
gatatatgggctttgccctctggcaatggcagaccatatgcttcaactgttacaattttaaaggatactaaatatatcaatgttgacgatgtaggacatg |
28276314 |
T |
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| Q |
118 |
tagatcaatctataggagaggttgctgaagataatatatggtagttatttttcaggatgacaattatgtagccaaagtcaccacctctgttgattgactt |
217 |
Q |
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| T |
28276315 |
tagatcaatctataggagaggttgctgaagataatatatggtagttatttttcaggatgacaattatgtagccaaagtcaccacctctgttgattgactt |
28276414 |
T |
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| Q |
218 |
ggttagaggtacatactacatagggttattg |
248 |
Q |
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| T |
28276415 |
ggttagaggtaca---tacatagggttattg |
28276442 |
T |
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