View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2261_low_27 (Length: 281)
Name: NF2261_low_27
Description: NF2261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2261_low_27 |
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Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 35 - 264
Target Start/End: Complemental strand, 31301368 - 31301140
Alignment:
| Q |
35 |
cacagagcaaaaaccacatgttgaagtttcaacaatcaaatctaccgtaatatcaaaacatgcactaaaattggaccttactcttaaaagatacgtctct |
134 |
Q |
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| T |
31301368 |
cacagagcaaaaaccacatgttgaagtttcaacaatcaaatctaccgtaatatcaaa-catgcaataaaattggaccttactcttaaaagatacgtctct |
31301270 |
T |
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| Q |
135 |
tatcacagaagtacacacaaaactcattattggattgtaagtaaataaatcagacattgaaagatgtagtatcatgctattgtatgtatgtttaggatga |
234 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31301269 |
tatcacagaagtacacacaaaactcattattggattgtaagtaaataaatcagacattgaaagatgtagtatcatgctattgtatgtatgtttaggatga |
31301170 |
T |
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| Q |
235 |
aaatcaaggaagaacaaacaacataccaag |
264 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
31301169 |
aaatcaaggaagaacaaacaacataccaag |
31301140 |
T |
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