View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2262R-Insertion-6 (Length: 641)
Name: NF2262R-Insertion-6
Description: NF2262R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2262R-Insertion-6 |
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Alignment Details
Target: chr7 (Bit Score: 597; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 597; E-Value: 0
Query Start/End: Original strand, 8 - 636
Target Start/End: Original strand, 28266601 - 28267227
Alignment:
| Q |
8 |
aaatggtgctcatttagtacgtatctttgtgaaataacataataatttgtgatttttcagtacaatttcaaacatctgatagtcatggattagaaaagaa |
107 |
Q |
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| T |
28266601 |
aaatggtgctcatttagtacgtatctttgtgaaataacataataatttgtgatttttcagtacaatttcaaacatctgatagtcatggattagaaaagaa |
28266700 |
T |
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| Q |
108 |
tacgcatttaaagtgatctcacaaaggttcttacattagtataatgattaacactatgttgtgtggtatacagatattttaattcacttcagagtgaatg |
207 |
Q |
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| T |
28266701 |
tacgcatttaaagtgatctcacaaaggttcttacattagtataatgattaacactatgttgtgtggtatacagatattttaattcacttcagagtgaatg |
28266800 |
T |
|
| Q |
208 |
ctttcctacctgttaccactctgatgtaaacatggtcatctctgctccgaccggaagtggtaaaacagtactctttgagctttgcattttgaggcttctc |
307 |
Q |
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| T |
28266801 |
ctttcctacctgttaccactctgatgtaaacatggtcatctctgctccgaccggaagtggtaaaacagtactctttgagctttgcattttgaggcttctc |
28266900 |
T |
|
| Q |
308 |
tccaggtccatatcatctgagggaagattcatacatgtgaagggatctcttaaaacagtaagtaatttctcacaaaattccggctctgaaaacttttcta |
407 |
Q |
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| T |
28266901 |
tccaggtccatatcatctgagggaagattcatacatgtgaagggatctcttaaaacagtaagtaatttctcacaaaattccggctctg-aaacttttcta |
28266999 |
T |
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| Q |
408 |
ttagtaatatttctctgtagtagtattgatttgtgttcaagaaagataaaactggtagacgggttctctttcttttagtgtcagtggggtaaacccagta |
507 |
Q |
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| T |
28267000 |
ttagtaatatttctctgtagtagtattgatttgtgttcaagaaaggtaaaactggtagacaggttctctttcttttagtgtcagtggtgtaaacccagta |
28267099 |
T |
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| Q |
508 |
cttttttgccacaaagaagactgatattgtattggtgcataaaaaacagtctacgcttttgtatggtgaatcactgaataatttgaagcttacaacttga |
607 |
Q |
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| T |
28267100 |
c-tttttgccataaagaagactgatattgtattggtgcataaaaaacagtctacgcttttgtatggtgaatcactgaataatttgaagcttacaacttga |
28267198 |
T |
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| Q |
608 |
aatctattttcattatcatgtcttgttaa |
636 |
Q |
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| T |
28267199 |
aatctattttcattatcatgtcttgttaa |
28267227 |
T |
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