View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2262_high_11 (Length: 276)
Name: NF2262_high_11
Description: NF2262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2262_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 58 - 259
Target Start/End: Original strand, 38864487 - 38864696
Alignment:
| Q |
58 |
attactcatatatattactatatattctttaaactaaaaaacaaaggcagtaccataattataaggctcaaaattcaaaaagttaaacagagttatttaa |
157 |
Q |
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| T |
38864487 |
attactcatatatgttactgtatattctttaaactaaaaaacaaaggcagtaccataattataaggctcaaaattcaaaaagttaaacagagttatttaa |
38864586 |
T |
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| Q |
158 |
ttgaacagtagttttctggtttaagacaacacgacgcttgtgtaggtataaaaggtttcagagc--------tgcactaaaagatttctcctctgatcga |
249 |
Q |
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| T |
38864587 |
ttgaacagtagttttctggtttaagacaacacgacgcttgtgtaggtataaaaggtttcagagctgtttttatgcactaaaaggtttctcctatgatcca |
38864686 |
T |
|
| Q |
250 |
taagtcctaa |
259 |
Q |
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|||||||||| |
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| T |
38864687 |
taagtcctaa |
38864696 |
T |
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