View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2263_low_4 (Length: 274)

Name: NF2263_low_4
Description: NF2263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2263_low_4
NF2263_low_4
[»] chr4 (61 HSPs)
chr4 (103-262)||(36073464-36073623)
chr4 (107-262)||(46441958-46442114)
chr4 (109-262)||(9088984-9089138)
chr4 (107-262)||(47290180-47290336)
chr4 (107-262)||(53123145-53123301)
chr4 (105-262)||(44893540-44893698)
chr4 (107-262)||(44893008-44893164)
chr4 (107-262)||(22199375-22199529)
chr4 (107-262)||(31078614-31078770)
chr4 (109-262)||(24128353-24128507)
chr4 (107-262)||(49387682-49387839)
chr4 (107-262)||(7744907-7745063)
chr4 (107-262)||(21802115-21802273)
chr4 (107-262)||(36073061-36073221)
chr4 (107-262)||(50156374-50156529)
chr4 (107-262)||(10442582-10442740)
chr4 (107-262)||(4751560-4751717)
chr4 (107-262)||(2624951-2625107)
chr4 (107-207)||(33530479-33530579)
chr4 (117-262)||(23964269-23964416)
chr4 (109-262)||(17655544-17655699)
chr4 (138-262)||(30563323-30563448)
chr4 (107-204)||(11314046-11314144)
chr4 (107-207)||(37219801-37219902)
chr4 (107-262)||(37934736-37934892)
chr4 (109-197)||(24392854-24392942)
chr4 (1-54)||(49216593-49216646)
chr4 (107-205)||(42671840-42671939)
chr4 (105-173)||(25063367-25063436)
chr4 (111-183)||(33530676-33530749)
chr4 (111-183)||(10442777-10442850)
chr4 (111-183)||(31078807-31078880)
chr4 (111-183)||(49387876-49387949)
chr4 (111-183)||(2624841-2624914)
chr4 (111-183)||(7745100-7745173)
chr4 (111-183)||(21802310-21802383)
chr4 (111-183)||(22199265-22199338)
chr4 (111-183)||(24392671-24392744)
chr4 (111-183)||(36072951-36073024)
chr4 (103-199)||(36073252-36073349)
chr4 (111-183)||(46441848-46441921)
chr4 (111-183)||(47290070-47290143)
chr4 (108-256)||(44744554-44744698)
chr4 (111-183)||(53123034-53123108)
chr4 (111-183)||(4751450-4751523)
chr4 (111-183)||(24128243-24128316)
chr4 (111-183)||(36073354-36073427)
chr4 (111-183)||(44893430-44893503)
chr4 (113-183)||(42671675-42671746)
chr4 (137-183)||(17655461-17655507)
chr4 (138-183)||(9088902-9088947)
chr4 (119-183)||(23964453-23964518)
chr4 (111-183)||(50156566-50156639)
chr4 (218-262)||(33530596-33530639)
chr4 (218-262)||(36073650-36073694)
chr4 (120-183)||(36073731-36073795)
chr4 (111-183)||(44893201-44893275)
chr4 (71-106)||(49216657-49216692)
chr4 (217-262)||(24392781-24392826)
chr4 (217-262)||(37219739-37219784)
chr4 (111-183)||(37934929-37935002)
[»] chr8 (66 HSPs)
chr8 (105-262)||(17841643-17841801)
chr8 (107-262)||(6108028-6108184)
chr8 (107-262)||(26041908-26042064)
chr8 (107-262)||(40779924-40780080)
chr8 (107-262)||(37985851-37986006)
chr8 (104-262)||(25581031-25581190)
chr8 (106-262)||(3596835-3596992)
chr8 (104-262)||(42754834-42754993)
chr8 (107-262)||(15187674-15187830)
chr8 (107-262)||(1645759-1645916)
chr8 (109-262)||(20091598-20091752)
chr8 (107-262)||(32064859-32065016)
chr8 (109-262)||(34665496-34665649)
chr8 (109-262)||(38017048-38017201)
chr8 (103-207)||(10044518-10044622)
chr8 (108-207)||(14129029-14129128)
chr8 (107-201)||(1503638-1503732)
chr8 (119-262)||(35353155-35353299)
chr8 (132-262)||(8453948-8454078)
chr8 (109-207)||(24211169-24211267)
chr8 (105-262)||(30055631-30055788)
chr8 (119-262)||(32393972-32394114)
chr8 (118-262)||(39772608-39772752)
chr8 (107-195)||(31347571-31347659)
chr8 (109-206)||(37132477-37132575)
chr8 (110-199)||(3890412-3890502)
chr8 (107-197)||(7022159-7022249)
chr8 (138-199)||(41819594-41819655)
chr8 (107-245)||(30834850-30834989)
chr8 (107-197)||(7017653-7017743)
chr8 (105-262)||(24844653-24844810)
chr8 (217-262)||(24211459-24211504)
chr8 (111-183)||(32064749-32064822)
chr8 (111-183)||(34665386-34665459)
chr8 (111-183)||(17841838-17841911)
chr8 (111-183)||(20091789-20091862)
chr8 (111-183)||(31347770-31347843)
chr8 (111-183)||(40780117-40780190)
chr8 (119-183)||(42755030-42755095)
chr8 (112-183)||(25581227-25581299)
chr8 (110-183)||(24844847-24844920)
chr8 (111-183)||(7017853-7017926)
chr8 (119-183)||(7021990-7022055)
chr8 (111-183)||(8453838-8453911)
chr8 (111-183)||(14128868-14128941)
chr8 (111-183)||(15187564-15187637)
chr8 (111-183)||(26042104-26042177)
chr8 (111-183)||(27782105-27782178)
chr8 (147-262)||(27835288-27835404)
chr8 (111-183)||(32393862-32393935)
chr8 (111-183)||(35353045-35353118)
chr8 (111-183)||(37986043-37986116)
chr8 (217-262)||(41819684-41819729)
chr8 (119-183)||(30835035-30835099)
chr8 (119-174)||(38016983-38017039)
chr8 (138-176)||(3890611-3890649)
chr8 (119-183)||(6108221-6108286)
chr8 (217-262)||(7017771-7017816)
chr8 (111-183)||(27835441-27835514)
chr8 (119-183)||(39772789-39772854)
chr8 (217-249)||(7022105-7022137)
chr8 (119-169)||(1886621-1886672)
chr8 (111-172)||(37132657-37132719)
chr8 (138-183)||(3817918-3817963)
chr8 (217-262)||(3890523-3890568)
chr8 (221-262)||(27782027-27782068)
[»] chr5 (40 HSPs)
chr5 (105-262)||(33584122-33584280)
chr5 (105-262)||(6043305-6043462)
chr5 (107-262)||(4892316-4892472)
chr5 (107-262)||(25398352-25398508)
chr5 (106-262)||(8145489-8145644)
chr5 (107-250)||(3521802-3521945)
chr5 (110-262)||(12850915-12851069)
chr5 (107-262)||(14138782-14138937)
chr5 (107-262)||(37321588-37321744)
chr5 (108-262)||(3362892-3363048)
chr5 (106-262)||(2477750-2477907)
chr5 (103-262)||(38899516-38899677)
chr5 (128-262)||(11360947-11361082)
chr5 (149-262)||(4433845-4433958)
chr5 (107-207)||(12614532-12614633)
chr5 (107-262)||(22912852-22913005)
chr5 (138-262)||(31640767-31640891)
chr5 (107-197)||(17545477-17545567)
chr5 (111-183)||(22913042-22913115)
chr5 (111-183)||(2477640-2477713)
chr5 (111-183)||(6043499-6043572)
chr5 (119-183)||(8145387-8145452)
chr5 (111-183)||(11361119-11361192)
chr5 (119-178)||(10458409-10458469)
chr5 (111-183)||(3362782-3362855)
chr5 (111-183)||(4433995-4434068)
chr5 (111-183)||(4892206-4892279)
chr5 (111-183)||(12614721-12614794)
chr5 (138-183)||(17545673-17545718)
chr5 (111-183)||(25398242-25398315)
chr5 (111-183)||(38899714-38899787)
chr5 (145-200)||(13664736-13664791)
chr5 (124-246)||(27481952-27482077)
chr5 (119-183)||(3521994-3522059)
chr5 (111-183)||(12850805-12850878)
chr5 (111-183)||(33584317-33584390)
chr5 (220-262)||(17545594-17545636)
chr5 (111-183)||(37321781-37321855)
chr5 (138-183)||(31640928-31640973)
chr5 (109-137)||(12614483-12614511)
[»] chr2 (43 HSPs)
chr2 (105-262)||(33380321-33380479)
chr2 (106-262)||(35160871-35161030)
chr2 (104-262)||(10662001-10662161)
chr2 (103-262)||(7475299-7475459)
chr2 (107-262)||(23267857-23268013)
chr2 (104-262)||(9293367-9293527)
chr2 (111-262)||(3989190-3989342)
chr2 (110-262)||(31174633-31174785)
chr2 (107-262)||(13354960-13355118)
chr2 (107-197)||(43331092-43331182)
chr2 (148-262)||(21936195-21936311)
chr2 (105-262)||(9723519-9723679)
chr2 (107-207)||(22592880-22592983)
chr2 (109-197)||(21393483-21393570)
chr2 (138-207)||(16767288-16767357)
chr2 (107-197)||(34320963-34321042)
chr2 (111-183)||(14941354-14941427)
chr2 (105-152)||(39819272-39819319)
chr2 (147-261)||(14941199-14941317)
chr2 (111-183)||(9293564-9293637)
chr2 (111-183)||(10661891-10661964)
chr2 (111-183)||(21936085-21936158)
chr2 (111-183)||(23268050-23268123)
chr2 (119-183)||(31174822-31174887)
chr2 (111-183)||(35160761-35160834)
chr2 (111-183)||(43330916-43330989)
chr2 (128-197)||(37335824-37335894)
chr2 (217-262)||(16767378-16767423)
chr2 (217-262)||(27847746-27847791)
chr2 (107-262)||(40262531-40262687)
chr2 (111-183)||(7475496-7475569)
chr2 (119-183)||(13354858-13354923)
chr2 (111-183)||(21393676-21393749)
chr2 (119-183)||(27847644-27847709)
chr2 (111-183)||(33380211-33380284)
chr2 (137-182)||(37335744-37335789)
chr2 (217-249)||(21393594-21393626)
chr2 (217-249)||(43331039-43331071)
chr2 (219-262)||(22591596-22591639)
chr2 (138-183)||(3989108-3989153)
chr2 (111-183)||(9723409-9723482)
chr2 (119-171)||(22591494-22591547)
chr2 (104-132)||(21936313-21936341)
[»] scaffold0085 (2 HSPs)
scaffold0085 (102-262)||(47964-48124)
scaffold0085 (111-183)||(47854-47927)
[»] chr7 (42 HSPs)
chr7 (105-262)||(24395086-24395243)
chr7 (107-262)||(3962093-3962248)
chr7 (107-262)||(48880722-48880878)
chr7 (107-262)||(45637826-45637981)
chr7 (103-262)||(30848683-30848843)
chr7 (107-262)||(42611925-42612081)
chr7 (107-207)||(35445567-35445667)
chr7 (109-262)||(4974532-4974686)
chr7 (107-262)||(15329387-15329544)
chr7 (107-262)||(25167651-25167801)
chr7 (107-260)||(15577642-15577799)
chr7 (107-262)||(34482949-34483108)
chr7 (104-207)||(35876414-35876517)
chr7 (107-262)||(42696197-42696354)
chr7 (108-197)||(37476876-37476965)
chr7 (116-207)||(29737314-29737406)
chr7 (109-262)||(20009895-20010049)
chr7 (107-197)||(15238564-15238654)
chr7 (107-197)||(18037157-18037247)
chr7 (111-183)||(4974723-4974796)
chr7 (111-183)||(42611815-42611888)
chr7 (111-183)||(45637716-45637789)
chr7 (111-180)||(15577841-15577911)
chr7 (111-183)||(15329277-15329350)
chr7 (111-183)||(34482839-34482912)
chr7 (111-183)||(48880915-48880988)
chr7 (138-183)||(15238414-15238459)
chr7 (111-183)||(24394976-24395049)
chr7 (111-183)||(35444562-35444635)
chr7 (103-171)||(36790267-36790336)
chr7 (106-173)||(40880640-40880706)
chr7 (220-262)||(35444672-35444714)
chr7 (111-172)||(37477079-37477141)
chr7 (111-183)||(3961983-3962056)
chr7 (119-183)||(18036990-18037055)
chr7 (111-183)||(25167838-25167911)
chr7 (111-183)||(29737143-29737216)
chr7 (111-183)||(36790454-36790527)
chr7 (217-262)||(37476986-37477031)
chr7 (220-262)||(15238496-15238538)
chr7 (217-262)||(18037092-18037137)
chr7 (217-262)||(29737253-29737298)
[»] chr3 (54 HSPs)
chr3 (107-262)||(3137209-3137365)
chr3 (105-262)||(19650693-19650850)
chr3 (107-262)||(22426140-22426295)
chr3 (105-252)||(30385525-30385672)
chr3 (106-262)||(37522167-37522324)
chr3 (107-262)||(33113907-33114064)
chr3 (107-262)||(3456178-3456334)
chr3 (107-262)||(3574321-3574477)
chr3 (107-207)||(34482683-34482783)
chr3 (106-262)||(3089531-3089690)
chr3 (107-262)||(37216848-37217004)
chr3 (107-262)||(6041998-6042147)
chr3 (105-262)||(2754831-2754991)
chr3 (108-262)||(8320378-8320535)
chr3 (107-262)||(48161019-48161176)
chr3 (109-262)||(33145826-33145980)
chr3 (98-262)||(47738219-47738391)
chr3 (107-249)||(36864827-36864969)
chr3 (105-207)||(26612916-26613019)
chr3 (107-197)||(40328011-40328102)
chr3 (107-197)||(8361834-8361924)
chr3 (109-207)||(42921295-42921394)
chr3 (107-197)||(9796824-9796914)
chr3 (107-197)||(41224414-41224504)
chr3 (119-207)||(33839705-33839794)
chr3 (103-262)||(42297978-42298126)
chr3 (108-207)||(46919064-46919164)
chr3 (104-206)||(24343720-24343823)
chr3 (111-183)||(2754721-2754794)
chr3 (217-262)||(30385125-30385170)
chr3 (122-262)||(41883031-41883174)
chr3 (111-183)||(3137402-3137475)
chr3 (111-183)||(3574515-3574588)
chr3 (111-183)||(6041888-6041961)
chr3 (119-183)||(9797017-9797082)
chr3 (111-183)||(33145717-33145789)
chr3 (138-183)||(8362033-8362078)
chr3 (111-183)||(11347272-11347345)
chr3 (225-262)||(34482824-34482861)
chr3 (111-183)||(37217041-37217114)
chr3 (217-262)||(40327939-40327984)
chr3 (217-262)||(42297468-42297513)
chr3 (119-183)||(47738117-47738182)
chr3 (119-183)||(19650888-19650953)
chr3 (111-183)||(30385015-30385088)
chr3 (111-183)||(34482898-34482971)
chr3 (138-183)||(41883211-41883256)
chr3 (170-262)||(11347382-11347476)
chr3 (217-262)||(8361951-8361996)
chr3 (119-183)||(22426332-22426397)
chr3 (217-262)||(24343661-24343706)
chr3 (119-183)||(26612797-26612862)
chr3 (217-262)||(33839645-33839690)
chr3 (217-246)||(41224363-41224392)
[»] chr1 (43 HSPs)
chr1 (107-262)||(19015518-19015674)
chr1 (107-262)||(6883601-6883757)
chr1 (107-262)||(36966503-36966659)
chr1 (107-262)||(41876237-41876393)
chr1 (107-262)||(51737619-51737775)
chr1 (108-262)||(40215102-40215257)
chr1 (106-262)||(37821628-37821785)
chr1 (107-262)||(25463790-25463946)
chr1 (107-262)||(44094812-44094967)
chr1 (105-251)||(25973534-25973679)
chr1 (107-262)||(20304925-20305082)
chr1 (107-262)||(3559731-3559887)
chr1 (106-262)||(9910085-9910244)
chr1 (107-207)||(18404618-18404718)
chr1 (105-197)||(32000059-32000151)
chr1 (107-197)||(33786426-33786516)
chr1 (109-197)||(40273888-40273976)
chr1 (106-183)||(19722893-19722970)
chr1 (109-204)||(44690818-44690914)
chr1 (107-262)||(27523050-27523206)
chr1 (107-207)||(10167569-10167670)
chr1 (110-183)||(33786623-33786696)
chr1 (111-183)||(16045786-16045859)
chr1 (111-183)||(40214992-40215065)
chr1 (111-183)||(40273706-40273779)
chr1 (111-183)||(18404446-18404519)
chr1 (111-183)||(25463680-25463753)
chr1 (111-183)||(44094702-44094775)
chr1 (108-179)||(52064373-52064445)
chr1 (111-183)||(6883491-6883564)
chr1 (111-183)||(9910281-9910354)
chr1 (111-183)||(19015408-19015481)
chr1 (111-183)||(32000255-32000328)
chr1 (111-183)||(36966696-36966769)
chr1 (111-183)||(37821822-37821895)
chr1 (217-262)||(44690935-44690980)
chr1 (145-199)||(52329453-52329507)
chr1 (111-183)||(3559621-3559694)
chr1 (217-262)||(40273816-40273861)
chr1 (104-199)||(22157330-22157425)
chr1 (217-248)||(32000173-32000204)
chr1 (111-179)||(41876434-41876503)
chr1 (217-262)||(52329383-52329427)
[»] scaffold0228 (6 HSPs)
scaffold0228 (107-262)||(26050-26206)
scaffold0228 (107-262)||(16098-16254)
scaffold0228 (174-262)||(8516-8605)
scaffold0228 (119-183)||(8414-8479)
scaffold0228 (119-183)||(15996-16061)
scaffold0228 (119-183)||(25948-26013)
[»] scaffold0096 (2 HSPs)
scaffold0096 (106-262)||(41125-41281)
scaffold0096 (111-183)||(41015-41088)
[»] chr6 (36 HSPs)
chr6 (107-262)||(17175816-17175972)
chr6 (107-262)||(33696810-33696967)
chr6 (106-262)||(18365368-18365524)
chr6 (106-262)||(18370632-18370788)
chr6 (105-262)||(33695119-33695278)
chr6 (107-262)||(28675262-28675418)
chr6 (107-262)||(32702319-32702475)
chr6 (105-262)||(2309216-2309374)
chr6 (107-262)||(17705264-17705416)
chr6 (107-262)||(23290876-23291035)
chr6 (109-262)||(6031537-6031692)
chr6 (145-262)||(18889477-18889594)
chr6 (109-197)||(11548386-11548474)
chr6 (107-262)||(29693552-29693716)
chr6 (148-250)||(6127402-6127506)
chr6 (175-262)||(9752109-9752196)
chr6 (105-185)||(582520-582602)
chr6 (111-183)||(33695315-33695388)
chr6 (111-183)||(33696700-33696773)
chr6 (108-173)||(34238883-34238948)
chr6 (152-262)||(8515567-8515677)
chr6 (111-183)||(6127279-6127352)
chr6 (111-183)||(23291072-23291145)
chr6 (217-262)||(25987044-25987089)
chr6 (113-183)||(11548576-11548647)
chr6 (111-173)||(25986934-25986997)
chr6 (105-161)||(2121002-2121059)
chr6 (111-183)||(17176009-17176082)
chr6 (111-183)||(17705453-17705526)
chr6 (111-183)||(18365561-18365634)
chr6 (111-183)||(18370825-18370898)
chr6 (111-183)||(28675152-28675225)
chr6 (111-183)||(18889685-18889757)
chr6 (138-183)||(9752233-9752278)
chr6 (111-173)||(8515723-8515786)
chr6 (119-183)||(32702217-32702282)
[»] scaffold0204 (2 HSPs)
scaffold0204 (104-262)||(4510-4669)
scaffold0204 (111-183)||(4400-4473)
[»] scaffold0178 (2 HSPs)
scaffold0178 (106-262)||(11735-11892)
scaffold0178 (111-183)||(11625-11698)
[»] scaffold0471 (2 HSPs)
scaffold0471 (109-262)||(12956-13110)
scaffold0471 (111-183)||(12846-12919)
[»] scaffold0665 (1 HSPs)
scaffold0665 (111-183)||(3072-3145)
[»] scaffold0041 (1 HSPs)
scaffold0041 (106-173)||(85577-85643)


Alignment Details
Target: chr4 (Bit Score: 129; Significance: 8e-67; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 103 - 262
Target Start/End: Complemental strand, 36073623 - 36073464
Alignment:
Q  103 aaatggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatct 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36073623 aaatggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatct 36073524  T
Q  203 ttcatnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||||         ||||||||||||||||||||||||||||||| ||||||||||||||    
T  36073523 ttcataaaaaaagatacataacacccaccaccccatgatttccggtcaggctgagatttt 36073464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 46442114 - 46441958
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46442114 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 46442015  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          |||||||||||||||||||||||||||||||||||| |||||||||    
T  46442014 taaaaaaaagatacataacacccaccaccccatgatttccggccaggttgagatttt 46441958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 109 - 262
Target Start/End: Complemental strand, 9089138 - 9088984
Alignment:
Q  109 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat- 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  9089138 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttcata 9089039  T
Q  208 nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
             ||||||||||||||||||||||||||||||||||||||||||||||    
T  9089038 caaaaaagatacataacacccaccaccccatgatttccggccaggctgagatttt 9088984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 47290336 - 47290180
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  47290336 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattattctttca 47290237  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||||||||||||||||||||||||||||||||||||    
T  47290236 taaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagatttt 47290180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 53123301 - 53123145
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  53123301 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttca 53123202  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||||||||||||||||||||||||| ||||||||||    
T  53123201 tacaaaaaagatacataacacccaccaccccatgatttccggccagactgagatttt 53123145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 105 - 262
Target Start/End: Complemental strand, 44893698 - 44893540
Alignment:
Q  105 atggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44893698 atggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 44893599  T
Q  205 cat-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||          |||||||||||||||| |||||||||| ||||||||||||||||||    
T  44893598 cataaaaaaaagatacataacacccaccatcccatgattttcggccaggctgagatttt 44893540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 44893008 - 44893164
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44893008 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 44893107  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          |||||||||||||||| |||||||||| ||||||||||||||||||    
T  44893108 taaaaaaaagatacataacacccaccatcccatgattttcggccaggctgagatttt 44893164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 22199529 - 22199375
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22199529 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 22199430  T
Q  207 tnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |         |||||||||||||||| ||||||||||| |||||||||||||||||    
T  22199429 taaaaaaaaatacataacacccacca-cccatgatttctggccaggctgagatttt 22199375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 31078614 - 31078770
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  31078614 ggaaaatgctagatatcaagaatgattttataaaaaaaattcaagaatgacatggcacaataatcatctttagatttcaatctcatttattaatctttca 31078713  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||| ||||||||||||||||||||||||||||||||    
T  31078714 taaaaaaaagatacataacacccatcaccccatgatttccggccaggctgagatttt 31078770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 109 - 262
Target Start/End: Complemental strand, 24128507 - 24128353
Alignment:
Q  109 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat- 207  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||     
T  24128507 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttcata 24128408  T
Q  208 nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
             ||||||||| ||||||||||||||||||||||||||||||||||||    
T  24128407 aaaaaaagatacataacatccaccaccccatgatttccggccaggctgagatttt 24128353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 49387682 - 49387839
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49387682 ggaaaatgttagatatcaaggatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 49387781  T
Q  207 t--nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |           ||||||||| |||||||||||||||||||||| |||||||||||||    
T  49387782 taaaaaaaaagatacataacatccaccaccccatgatttccggctaggctgagatttt 49387839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 7744907 - 7745063
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||    
T  7744907 ggaaaatgttagatatcaagaatgattttataagaaagattcaagaatgacattgcacaataatcacctttagatttcaatctcatttattaatatttca 7745006  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||||||||||||||||||||||||||||||||||||    
T  7745007 taaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagatttt 7745063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 21802115 - 21802273
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  21802115 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaatctttca 21802214  T
Q  207 tnnnnnnnnntacataacac---ccaccaccccatgatttccggccaggctgagatttt 262  Q
    |         ||||||||||   ||||||||||||||||||||||||| ||||||||||    
T  21802215 taaaaaaaaatacataacacccaccaccaccccatgatttccggccagactgagatttt 21802273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 36073221 - 36073061
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36073221 ggaaaatgctagatatcaaaaatgattttataagaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttca 36073122  T
Q  207 t-----nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |              ||||||||||||||||||||||||||||||||||| ||||||||||    
T  36073121 taaaaaaaaaaaagatacataacacccaccaccccatgatttccggccagactgagatttt 36073061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 50156374 - 50156529
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||    
T  50156374 ggaaaatgttagatatcaagaatgattttataagaaaaattcaagaatgacatgacataataatcacc-ttagatttcagtctcatttattaatctttca 50156472  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||||||||||||||||||||||||||||||||||||    
T  50156473 taaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagatttt 50156529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 10442582 - 10442740
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcattta-ttaatctttc 205  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10442582 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatttaatctttc 10442681  T
Q  206 --atnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
      |           |||||||||||||||||||||||||||||||||||||||||||||    
T  10442682 aaaaaaaaaaaaaaacataacacccaccaccccatgatttccggccaggctgagatttt 10442740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 4751717 - 4751560
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4751717 ggaaaatgctagatatcaagaataattttataagaaaaatttaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttca 4751618  T
Q  207 t--nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |           |||||||||||||||||||||||||||||| |||| ||||||||||    
T  4751617 taaaaaagaaaatacataacacccaccaccccatgatttccgaccagactgagatttt 4751560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 2625107 - 2624951
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    |||||||| |||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2625107 ggaaaatgttagatatcaagaatgattttataagaaagattcaaaaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttca 2625008  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||||||| ||||||||||||||||| ||||||||||    
T  2625007 taaaaaaaaaatacataacacccaccactccatgatttccggccagactgagatttt 2624951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 107 - 207
Target Start/End: Original strand, 33530479 - 33530579
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33530479 ggaaaatgctagatatcaagaatgattttataaaaaagatccaagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttca 33530578  T
Q  207 t 207  Q
    |    
T  33530579 t 33530579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 117 - 262
Target Start/End: Original strand, 23964269 - 23964416
Alignment:
Q  117 agatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat--nnnnnnn 214  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||             
T  23964269 agatatcaagaatgattttataagaaagatttaagaatgacatggcataataatcatctttagatttcaatctcatttattaatctttcataaaaaaaaa 23964368  T
Q  215 nntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
      |||||||||||||||||| |||||||||||| ||||||||||||||    
T  23964369 aatacataacacccaccaccgcatgatttccggtcaggctgagatttt 23964416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 262
Target Start/End: Complemental strand, 17655699 - 17655544
Alignment:
Q  109 aaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 207  Q
    |||||||||||||| |||||||||||||| |||||| ||| |||||||||||| || |||||| |||||||||||||||||||||||||||| |||||||    
T  17655699 aaaatgctagatattaagaatgattttatcaagaaagatttaagaatgacatgacataataattacctttagatttcagtctcatttattaacctttcat 17655600  T
Q  208 nnnnnnnnntac--ataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
             |||  |||||||||| || |||||||||||||||||||||||||||||    
T  17655599 -aaaaaaaatacatataacacccatcatcccatgatttccggccaggctgagatttt 17655544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 138 - 262
Target Start/End: Complemental strand, 30563448 - 30563323
Alignment:
Q  138 aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcatnnnnnnnnn-tacataacacccaccacccc 236  Q
    |||||| |||||||||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||||          ||||||||||||||||||||    
T  30563448 aagaaagattcaagaatgacatgacacaataatcacacttagatttcagtcttatttattaacctttcataaaaaaaaaatacataacacccaccacccc 30563349  T
Q  237 atgatttccggccaggctgagatttt 262  Q
    ||||||||||||||||||||||||||    
T  30563348 atgatttccggccaggctgagatttt 30563323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 107 - 204
Target Start/End: Original strand, 11314046 - 11314144
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 204  Q
    ||||||||||||||||||||||||||||||| |||||| || ||||||||||||| ||||||||||||| |||||||  ||||| ||||||||| ||||    
T  11314046 ggaaaatgctagatatcaagaatgattttatcaagaaagatgcaagaatgacatgacacaataatcacccttagattatagtcttatttattaaccttt 11314144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 37219902 - 37219801
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    |||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||||| |||||||| | |||||||||| ||| ||||||||| |||||    
T  37219902 ggaaaatgttagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatcatccttagatttcaatcttatttattaacctttc 37219803  T
Q  206 at 207  Q
    ||    
T  37219802 at 37219801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 37934736 - 37934892
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    |||||||| ||||||| | || ||||||||| |||||| |||||| ||||| ||| ||||||||||||| |||||||||| ||||||||||||| |||||    
T  37934736 ggaaaatgttagatattatgactgattttattaagaaagattcaataatgatatgacacaataatcacccttagatttcaatctcatttattaacctttc 37934835  T
Q  206 atnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||         ||||||||| |||||| ||||| ||||||| |||| ||||||||||    
T  37934836 ataaaaaaaaatacataacaaccaccatcccataatttccgaccagactgagatttt 37934892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 24392942 - 24392854
Alignment:
Q  109 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 197  Q
    ||||||||||||||||||||||||||   |||||| ||| ||||||||||| |||||||||||| | ||||||||||||||||||||||    
T  24392942 aaaatgctagatatcaagaatgatttatcaagaaatatttaagaatgacatagcacaataatcatccttagatttcagtctcatttatt 24392854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 49216593 - 49216646
Alignment:
Q  1 gtgcagttaaagaaaatgagttaataagactagcttttttaccactgtcaagga 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49216593 gtgcagttaaagaaaatgagttaataagactagcttttttaccactgtcaagga 49216646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 42671939 - 42671840
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    |||||||| |||||||||||||||||||||| |||||| |||||||||||||||| || ||||||||   |||||||| |||||||||| |||| |||||    
T  42671939 ggaaaatgttagatatcaagaatgattttatcaagaaagattcaagaatgacatgacataataatcattcttagatttgagtctcatttgttaacctttc 42671840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 25063367 - 25063436
Alignment:
Q  105 atggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcac 173  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||    
T  25063367 atggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatggtagaataatcac 25063436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 33530749 - 33530676
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| ||||||||    
T  33530749 aatgctatatatcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 33530676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 10442850 - 10442777
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  10442850 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 10442777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 31078880 - 31078807
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  31078880 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 31078807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 49387949 - 49387876
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  49387949 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 49387876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 2624841 - 2624914
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  2624841 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgaaatggcagaataatcacccttagattt 2624914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 7745173 - 7745100
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  7745173 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 7745100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 21802383 - 21802310
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| ||||||||||  ||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  21802383 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 21802310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 22199265 - 22199338
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||| | ||||||||    
T  22199265 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcagccttagattt 22199338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 24392671 - 24392744
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | |||||||||||||||||||||||||| |||||||||| ||| ||||    
T  24392671 aatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcacccttaaattt 24392744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 36072951 - 36073024
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| ||||| |||| ||||||||    
T  36072951 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataaccacccttagattt 36073024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 199
Target Start/End: Original strand, 36073252 - 36073349
Alignment:
Q  103 aaatggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 199  Q
    |||||||||||||||||||  || ||||||||||| |||||| ||| |||||||| ||| || |||||| ||  |||||||||||||| |||||||||    
T  36073252 aaatggaaaatgctagatactaaaaatgattttatcaagaaagatttaagaatgatatgccagaataattactcttagatttcagtcttatttattaa 36073349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 46441848 - 46441921
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  46441848 aatgctatatatcaagaaagatttttttaagaaaatttcaagaatgacatggcaaaataatcacccttagattt 46441921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 47290070 - 47290143
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  47290070 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 47290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 256
Target Start/End: Complemental strand, 44744698 - 44744554
Alignment:
Q  108 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 207  Q
    ||||||| |||||||||| ||||||||||| |   | |||||||||||||||| | ||||||| | | |||||||||||||| ||||||||| || | |     
T  44744698 gaaaatgttagatatcaaaaatgattttatca---agattcaagaatgacatgactcaataattatccttagatttcagtcttatttattaacctat-ac 44744603  T
Q  208 nnnnnnnnntacataacacccaccaccccatgatttccggccaggctga 256  Q
             ||||||||||||||||||| ||||||||||||||| ||||    
T  44744602 aaaaaaaaatacataacacccaccaccctatgatttccggccagactga 44744554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 53123034 - 53123108
Alignment:
Q  111 aatgctagatatcaagaatgattttat--aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| |  ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  53123034 aatgctatatatcaagaaagattttttcaaagaaaatttcaagaatgacatggcagaataatcacccttagattt 53123108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 4751450 - 4751523
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| | |||||||||||||||| ||||| |||| ||||||||    
T  4751450 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 4751523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 24128243 - 24128316
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||| | ||||||||    
T  24128243 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcatccttagattt 24128316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 36073354 - 36073427
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||| ||||    
T  36073354 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttaaattt 36073427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 44893430 - 44893503
Alignment:
Q  111 aatgctagatatcaagaatgattttataagaaaaatt-caagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | | ||||||| |||||||||||||||| |||||||||| ||||||||    
T  44893430 aatgctatatatcaagaaagattttttcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 44893503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 42671675 - 42671746
Alignment:
Q  113 tgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||| ||||||| || |||||||| || ||||||| ||||||||||||||| |||||||||| ||||||||    
T  42671675 tgctatatatcaataaagattttatcaaaaaaaatttaagaatgacatggcagaataatcacccttagattt 42671746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 17655461 - 17655507
Alignment:
Q  137 taagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||| |||||||||||||||||| |||||||||| ||||||||    
T  17655461 taagaaaatttcaagaatgacatggcagaataatcacccttagattt 17655507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 9088902 - 9088947
Alignment:
Q  138 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  9088902 aagaaaatttcaagaatgacatggcagaataatcacccttagattt 9088947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 23964518 - 23964453
Alignment:
Q  119 atatcaagaatgattttataagaaaaattc-aagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||| |||||||| | |||||||  ||||||||||||||| |||||||||| ||||||||    
T  23964518 atatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttagattt 23964453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 50156639 - 50156566
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||| ||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  50156639 aatgctatatattaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 50156566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 33530596 - 33530639
Alignment:
Q  218 acataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||||||||||||||||| |||||||||||||||||||| |||||    
T  33530596 acataacacccaccaccc-atgatttccggccaggctgaaatttt 33530639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 36073650 - 36073694
Alignment:
Q  218 acataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||| |||||||||||||||||||||||  ||||||||||    
T  36073650 acataacacgcaccaccccatgatttccggccaaactgagatttt 36073694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 36073795 - 36073731
Alignment:
Q  120 tatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||||| |||||||| |||||| ||| |||||||||||| || ||||||||| |||||||||    
T  36073795 tatcaagaaagattttatgaagaaagatttaagaatgacatgacaaaataatcacttttagattt 36073731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 44893275 - 44893201
Alignment:
Q  111 aatgctagatatcaagaatgattttataagaaaaa--ttcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||| ||||| |||||| | | |||||  |||||||||||||||||| |||||||||| ||||||||    
T  44893275 aatgctatatattaagaaagattttttcaaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 44893201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 49216657 - 49216692
Alignment:
Q  71 gtctgtaatttcattatttttatgaatatatgaaat 106  Q
    ||||||||||||| ||||||||||||||||||||||    
T  49216657 gtctgtaatttcagtatttttatgaatatatgaaat 49216692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 24392826 - 24392781
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||||| ||||||||||||||||||| | | ||||||||    
T  24392826 tacataacacccatcaccccatgatttccggcccgacagagatttt 24392781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 37219784 - 37219739
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||| ||| ||||| ||||||||||||||| ||||||||||    
T  37219784 tacataacatccatcacccaatgatttccggccagactgagatttt 37219739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 37935002 - 37934929
Alignment:
Q  111 aatgctagatatcaagaatgattttataagaaaaat-tcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| ||||||| || |||||||| | |||||| ||||||||||||||| | |||| ||||| ||||||||    
T  37935002 aatgctatatatcaaaaaagattttatcaaaaaaatgtcaagaatgacatggtagaatactcacccttagattt 37934929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 8e-64; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 105 - 262
Target Start/End: Original strand, 17841643 - 17841801
Alignment:
Q  105 atggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17841643 atggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 17841742  T
Q  205 cat-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||          ||||||||||||||||||||||||||||||||||||||||||||||    
T  17841743 cataaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagatttt 17841801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 6108028 - 6108184
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6108028 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 6108127  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||||||||||||||||||||||||||||||||||||    
T  6108128 taaaaagaagatacataacacccaccaccccatgatttccggccaggctgagatttt 6108184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 26041908 - 26042064
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26041908 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 26042007  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||||||||||||||||||||| ||||||||||||||    
T  26042008 taaaaaaaagatacataacacccaccaccccatgatttccggtcaggctgagatttt 26042064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 40779924 - 40780080
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40779924 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 40780023  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||| ||||||||||||||||||||||||||||||||||||    
T  40780024 taaaaaaaagatacataacatccaccaccccatgatttccggccaggctgagatttt 40780080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 37985851 - 37986006
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37985851 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcccatttattaatctttca 37985950  T
Q  207 tnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |         ||||||||||||||||||||||||||||||||||| ||||||||||    
T  37985951 taaaaaaaaatacataacacccaccaccccatgatttccggccagactgagatttt 37986006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 104 - 262
Target Start/End: Original strand, 25581031 - 25581190
Alignment:
Q  104 aatggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  25581031 aatggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacataacacaataatcacctttagatttcagtctcatttattaatctt 25581130  T
Q  204 tcat-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||          ||||||||||||||||||||||||||||||| ||||||||||||||    
T  25581131 tcataaaaaaaagatacataacacccaccaccccatgatttccggtcaggctgagatttt 25581190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 106 - 262
Target Start/End: Original strand, 3596835 - 3596992
Alignment:
Q  106 tggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3596835 tggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgatatggcacaataatcacctttagatttcagtctcatttattaatctttc 3596934  T
Q  206 at-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||          ||||||||||||||||||||||||||||||| ||||||||||||||    
T  3596935 ataaaaaaaagatacataacacccaccaccccatgatttccggtcaggctgagatttt 3596992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 104 - 262
Target Start/End: Original strand, 42754834 - 42754993
Alignment:
Q  104 aatggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 203  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42754834 aatggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctt 42754933  T
Q  204 tcat-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||          |||||||||||||||| |||||||||| ||||||||||||||||||    
T  42754934 tcataaaaaaaaaatacataacacccaccatcccatgattttcggccaggctgagatttt 42754993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 15187830 - 15187674
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15187830 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttca 15187731  T
Q  207 tnnnnnnnnntacataacacccaccaccccatgatttccggccaggct-gagatttt 262  Q
    |         ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  15187730 taaaaaaaaatacataacacccaccactccatgatttccggccaggctagagatttt 15187674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 1645759 - 1645916
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1645759 ggaaaatgctagatatcaagaatgattttataagaaagaaccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 1645858  T
Q  207 t--nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |           |||||||||||||||||||||||||||||| |||||||||||||||    
T  1645859 taaaaaaaaaaatacataacacccaccaccccatgatttccgaccaggctgagatttt 1645916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 109 - 262
Target Start/End: Original strand, 20091598 - 20091752
Alignment:
Q  109 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat- 207  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||     
T  20091598 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcata 20091697  T
Q  208 nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
             |||||||||||||||||||||||||||||||| |||||||||||||    
T  20091698 aaaaaaaaatacataacacccaccaccccatgatttccggctaggctgagatttt 20091752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 32065016 - 32064859
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32065016 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 32064917  T
Q  207 t--nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |           ||||||||||||| || |||||||||||||||||||||||||||||    
T  32064916 taaaaaaaaagatacataacacccatcagcccatgatttccggccaggctgagatttt 32064859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 109 - 262
Target Start/End: Complemental strand, 34665649 - 34665496
Alignment:
Q  109 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcatn 208  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||     
T  34665649 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcata 34665550  T
Q  209 nnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
            ||||||||||||||||| ||||||||| |||||| |||||||||||    
T  34665549 aaaaaaaatacataacacccaccactccatgattttcggccaagctgagatttt 34665496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 109 - 262
Target Start/End: Complemental strand, 38017201 - 38017048
Alignment:
Q  109 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataa-tcacctttagatttcagtctcatttattaatctttcat 207  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||     
T  38017201 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatttacctttagatttcagtctcatttattaatctttca- 38017103  T
Q  208 nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
             ||||||||||||||||||||||||||||||||||||||||||||||    
T  38017102 aaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagatttt 38017048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 103 - 207
Target Start/End: Complemental strand, 10044622 - 10044518
Alignment:
Q  103 aaatggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatct 202  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10044622 aaatggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatct 10044523  T
Q  203 ttcat 207  Q
    |||||    
T  10044522 ttcat 10044518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 14129128 - 14129029
Alignment:
Q  108 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 207  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14129128 gaaaatgctagatatcaagaatgattttataagaaatattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 14129029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 1503638 - 1503732
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1503638 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatc 1503732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 119 - 262
Target Start/End: Complemental strand, 35353299 - 35353155
Alignment:
Q  119 atatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat-nnnnnnnnnt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||          |    
T  35353299 atatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttaaattttaatctcatttattaatctttcataaaaaaaagat 35353200  T
Q  218 acataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  35353199 acataacacccaccacctcatgatttccggccaggctgagatttt 35353155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 132 - 262
Target Start/End: Complemental strand, 8454078 - 8453948
Alignment:
Q  132 ttttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcatnnnnnnnnntacataacacccacc 231  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||    
T  8454078 ttttataagaagaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaagatacataacacccacc 8453979  T
Q  232 accccatgatttccggccaggctgagatttt 262  Q
    || |||| |||||||||||||||||||||||    
T  8453978 acaccataatttccggccaggctgagatttt 8453948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 109 - 207
Target Start/End: Original strand, 24211169 - 24211267
Alignment:
Q  109 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 207  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24211169 aaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 24211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 105 - 262
Target Start/End: Complemental strand, 30055788 - 30055631
Alignment:
Q  105 atggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 204  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| ||||    
T  30055788 atggaaaatgctagatattaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagattttagtctcatttattaaccttt 30055689  T
Q  205 cat-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||          ||||||||| |||||||||||||||||||||||| |||||||||||    
T  30055688 cataaaaaaaaaatacataacatccaccaccccatgatttccggcca-gctgagatttt 30055631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 119 - 262
Target Start/End: Complemental strand, 32394114 - 32393972
Alignment:
Q  119 atatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcatnnnnnnnnnta 218  Q
    ||||||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||         ||    
T  32394114 atatcaagaatgattttataaaaaatatttaagaatgacatg-cacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaata 32394016  T
Q  219 cataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||| ||||||||||||||| |||| || ||||||||||    
T  32394015 cataacacctaccaccccatgattttcggctagactgagatttt 32393972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 118 - 262
Target Start/End: Original strand, 39772608 - 39772752
Alignment:
Q  118 gatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat-nnnnnnnnn 216  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||              
T  39772608 gatatcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtttcgtttattaatctttcataaaaaaaaaa 39772707  T
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||||||||||||||| |||||||||||||| | ||||||||||||    
T  39772708 tacataacacccaccatcccatgatttccgg-ctggctgagatttt 39772752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 31347571 - 31347659
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcattta 195  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31347571 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcattta 31347659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 109 - 206
Target Start/End: Original strand, 37132477 - 37132575
Alignment:
Q  109 aaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||||||| |||||||||||||| ||||||||| ||||||    
T  37132477 aaaatgctagatatcaagaatgattttatcaagaaagattcatgaatgacatgacacaataatcacccttagatttcagtcttatttattaacctttca 37132575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 3890412 - 3890502
Alignment:
Q  110 aaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 199  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||| |||||||||| |||||||| | ||| |||||||||    
T  3890412 aaatgctagatatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatcaccattagattttaatcttatttattaa 3890502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 7022249 - 7022159
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 197  Q
    ||||||||||||||||||| ||||||||   |||||| |||||||||||||| | |||||||||| || ||||||||||||||||||||||    
T  7022249 ggaaaatgctagatatcaacaatgatttatcaagaaagattcaagaatgacaagtcacaataatcgcccttagatttcagtctcatttatt 7022159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 41819594 - 41819655
Alignment:
Q  138 aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 199  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  41819594 aagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaa 41819655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 245
Target Start/End: Original strand, 30834850 - 30834989
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    |||||||| |||||||||||||||||||||| |||||| ||| |||||||||||| || ||||| |||| |||||||||||| | |||| | ||  |||     
T  30834850 ggaaaatgatagatatcaagaatgattttatcaagaaagattaaagaatgacatgacagaataaccacccttagatttcagtgttatttttcaacttttg 30834949  T
Q  206 atnnnnnnnnntacataacacccaccaccccatgatttcc 245  Q
    ||         |||||||||||||||||||||||||||||    
T  30834950 ataaaataaaatacataacacccaccaccccatgatttcc 30834989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 7017653 - 7017743
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 197  Q
    ||||||||||||||||||||||||||||   |||||| ||| |||||||||||   | |||||||| | ||||||||||||||||||||||    
T  7017653 ggaaaatgctagatatcaagaatgatttatcaagaaatatttaagaatgacattttataataatcatccttagatttcagtctcatttatt 7017743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 105 - 262
Target Start/End: Original strand, 24844653 - 24844810
Alignment:
Q  105 atggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 203  Q
    |||||||||| |||||||||| ||||||||||| |||||| ||| ||||||| ||||||| |||||||||  |||||||| | ||| | ||||||| |||    
T  24844653 atggaaaatgttagatatcaataatgattttatcaagaaagatttaagaatggcatggcaaaataatcactcttagattttaatcttaattattaacctt 24844752  T
Q  204 tcatnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||         ||||||||||||||||||| |||||||||   |||| |||||||||    
T  24844753 tcat-aaaaaaaatacataacacccaccaccctatgatttccaatcaggatgagatttt 24844810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 24211459 - 24211504
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  24211459 tacataacacccaccaccccatgatttccggccaggctgagatttt 24211504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 32064749 - 32064822
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  32064749 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 32064822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 34665386 - 34665459
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  34665386 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 34665459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 17841911 - 17841838
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  17841911 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 17841838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 20091862 - 20091789
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| ||||||||||  ||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  20091862 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 20091789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 31347843 - 31347770
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| ||||||||||  ||||| | |||||||||||||||||||||||||| |||||||||| ||||||||    
T  31347843 aatgctatatatcaagaaatattttctcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 31347770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 40780190 - 40780117
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  40780190 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 40780117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 42755095 - 42755030
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  42755095 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 42755030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 183
Target Start/End: Complemental strand, 25581299 - 25581227
Alignment:
Q  112 atgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||| |||||||||| | |||||  ||||||| |||||||||||||||||| |||||||||||||||||||    
T  25581299 atgctatatatcaagaaagtttttacgaagaaaatttcaagaatgacatggcaaaataatcacctttagattt 25581227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 183
Target Start/End: Complemental strand, 24844920 - 24844847
Alignment:
Q  110 aaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||| ||||||||||  ||||||| ||||||||||||||||||||||| || |||||||||| ||||||||    
T  24844920 aaatgctacatatcaagaaatattttattaagaaaaattcaagaatgacatgaca-aataatcacccttagattt 24844847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 7017926 - 7017853
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||| ||| |||||| | |||||||||||||||||||||||||| |||||||| | ||||||||    
T  7017926 aatgctatatatcatgaaagattttcttaagaaaaattcaagaatgacatggcagaataatcatccttagattt 7017853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 7021990 - 7022055
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||| |||||| | ||||||||||||||||||| |||||| |||||||||| ||||||||    
T  7021990 atatcaagaaagattttctcaagaaaaattcaagaatgatatggcagaataatcacccttagattt 7022055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 8453838 - 8453911
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  8453838 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgacaaaataatcacccttagattt 8453911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 14128868 - 14128941
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| || |||| || ||||||||||||||| |||||||||| ||||||||    
T  14128868 aatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatcacccttagattt 14128941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 15187564 - 15187637
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||| ||| ||||||||    
T  15187564 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataattacccttagattt 15187637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 26042177 - 26042104
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||| ||||| |||||||| ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  26042177 aatgctatatattaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 26042104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 27782178 - 27782105
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| ||||||||||  ||||||| |||||| |||||| |||||||||||| |||||||||| ||||||||    
T  27782178 aatgctatatatcaagaaatattttatcaagaaagattcaataatgacatggcagaataatcacccttagattt 27782105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 27835288 - 27835404
Alignment:
Q  147 tcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcatnnnnnnnnn-tacataacacccaccaccccatgatttcc 245  Q
    |||| ||||| ||| ||||||||||| | |||||||||| ||||||||||||| |||| ||          |||||||||||||||| ||||||||||||    
T  27835288 tcaaaaatgatatgacacaataatcatccttagatttcaatctcatttattaaccttttataaaacaaaaatacataacacccaccatcccatgatttcc 27835387  T
Q  246 ggccaggctgagatttt 262  Q
    | | |||||||||||||    
T  27835388 gtctaggctgagatttt 27835404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 32393862 - 32393935
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||| ||||    
T  32393862 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 32393935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 35353045 - 35353118
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  35353045 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 35353118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 37986116 - 37986043
Alignment:
Q  111 aatgctagatatcaagaatgattttataagaaaaattc-aagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| | |||||||  ||||||||||||||| |||||||||| ||||||||    
T  37986116 aatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttagattt 37986043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 41819684 - 41819729
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||    
T  41819684 tacataacacacaccaccccatgatttccggccgggctgagatttt 41819729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 30835099 - 30835035
Alignment:
Q  119 atatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||| ||||||||   ||||||||||||||||||||||| |||||||||| || |||||    
T  30835099 atatcaagaaagattttatcgaaaaaattcaagaatgacatggcagaataatcaccctttgattt 30835035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 38016983 - 38017039
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacc 174  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| ||||||||||    
T  38016983 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacc 38017039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 3890649 - 3890611
Alignment:
Q  138 aagaaaaattcaagaatgacatggcacaataatcacctt 176  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  3890649 aagaaaaattcaagaatgacatggcagaataatcacctt 3890611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 6108286 - 6108221
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  6108286 atatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatcacccttagattt 6108221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 7017771 - 7017816
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||||||||||||||||||||||||| | | ||||||||    
T  7017771 tacataacacccaccaccccatgatttccggcccgacagagatttt 7017816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 27835514 - 27835441
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| ||||||| || ||| |||| |||||||||||||||||||||||| | |||||||| | ||||||||    
T  27835514 aatgctatatatcaataaagatcttattaagaaaaattcaagaatgacatggtaaaataatcatccttagattt 27835441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 39772854 - 39772789
Alignment:
Q  119 atatcaagaatgattttataagaaaaatt-caagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||||||  ||||||| | ||||||| |||||||||||||||| |||||||||| ||||||||    
T  39772854 atatcaagaaatattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 39772789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 249
Target Start/End: Complemental strand, 7022137 - 7022105
Alignment:
Q  217 tacataacacccaccaccccatgatttccggcc 249  Q
    |||||||||||||||||||||||||||||||||    
T  7022137 tacataacacccaccaccccatgatttccggcc 7022105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 1886672 - 1886621
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataa 169  Q
    ||||||||||||||||||| |||||| ||||||||||||| ||||| |||||    
T  1886672 atatcaagaatgattttatcaagaaagattcaagaatgacgtggcagaataa 1886621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 37132719 - 37132657
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatca 172  Q
    ||||||| ||||||| ||  ||||||| |||||||||| ||||||||||||||| ||||||||    
T  37132719 aatgctatatatcaaaaaatattttatcaagaaaaatttaagaatgacatggcagaataatca 37132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 3817963 - 3817918
Alignment:
Q  138 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||||||||||||| ||||| || |||||||||| ||||||||    
T  3817963 aagaaaaattcaagaattacatgacagaataatcacccttagattt 3817918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 3890523 - 3890568
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||||||||||||||||||| | |||| | |||||||||    
T  3890523 tacataacacccaccaccccatgattttcagccatgatgagatttt 3890568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 27782027 - 27782068
Alignment:
Q  221 taacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||||||| ||||||||||||||| || |||||||    
T  27782027 taacacccaccacccaatgatttccggccagactaagatttt 27782068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 8e-64; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 105 - 262
Target Start/End: Original strand, 33584122 - 33584280
Alignment:
Q  105 atggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33584122 atggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 33584221  T
Q  205 cat-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||          ||||||||||||||||||||||||||||||||||||||||||||||    
T  33584222 cataaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagatttt 33584280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 105 - 262
Target Start/End: Original strand, 6043305 - 6043462
Alignment:
Q  105 atggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6043305 atggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 6043404  T
Q  205 catnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||         ||||||||||||| ||||||||||||||||||||||||||||||||    
T  6043405 cataaaaaaaaatacataacacccaacaccccatgatttccggccaggctgagatttt 6043462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 4892472 - 4892316
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4892472 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 4892373  T
Q  207 -tnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
     |         ||||||||||||||||||||||||||||||||||||||||||||||    
T  4892372 ttaaaagaagatacataacacccaccaccccatgatttccggccaggctgagatttt 4892316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 25398508 - 25398352
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25398508 ggaaaatgctagatatcaagaatgattttataagaaaaattcaacaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 25398409  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||||||||||||||||||||||||||||||||||||    
T  25398408 taaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagatttt 25398352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 106 - 262
Target Start/End: Complemental strand, 8145644 - 8145489
Alignment:
Q  106 tggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8145644 tggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 8145545  T
Q  206 atnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||         |||||||||||||||| ||||||||||||| |||||||||||||||    
T  8145544 ataaaaaaaaatacataacacccacca-cccatgatttccgaccaggctgagatttt 8145489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 107 - 250
Target Start/End: Original strand, 3521802 - 3521945
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3521802 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 3521901  T
Q  207 tnnnnnnnnntacataacacccaccaccccatgatttccggcca 250  Q
    |         ||||||||||||||||||||||||||||||||||    
T  3521902 taaaaaaagatacataacacccaccaccccatgatttccggcca 3521945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 110 - 262
Target Start/End: Complemental strand, 12851069 - 12850915
Alignment:
Q  110 aaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat-- 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||      
T  12851069 aaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcataa 12850970  T
Q  208 nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
             ||||||||||||||||||||||||||||||||||||||||||||||    
T  12850969 aaaagaaaatacataacacccaccaccccatgatttccggccaggctgagatttt 12850915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 14138937 - 14138782
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14138937 ggaaaatgctagatattaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttca 14138838  T
Q  207 tnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |         ||||||||||||||||||||||||||||||  ||||||||||||||    
T  14138837 taaaaaaaaatacataacacccaccaccccatgatttccgatcaggctgagatttt 14138782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 37321588 - 37321744
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37321588 ggaaaatgctagatatcaagaatgattttataagaaatattcaagaatgaaatggcacaataatcacctttagatttcagtctcatttattaatctttca 37321687  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          |||||||||||||||||||||||||||||||| || ||||||||||    
T  37321688 taaataaaaaatacataacacccaccaccccatgatttccggctagactgagatttt 37321744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 108 - 262
Target Start/End: Complemental strand, 3363048 - 3362892
Alignment:
Q  108 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 207  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  3363048 gaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataaccacctttagatttcagtctcatttattaatctttcat 3362949  T
Q  208 --nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
               ||||||||||||||||||||||||||||||||||| ||||||||||    
T  3362948 aaaaaaaaagatacataacacccaccaccccatgatttccggccagactgagatttt 3362892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 106 - 262
Target Start/End: Complemental strand, 2477907 - 2477750
Alignment:
Q  106 tggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    |||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  2477907 tggaaaatgctagatatcaagaatgattttataagaaagatctaagaatgacatggcacaatgatcacctttagatttcagtcttatttattaatctttc 2477808  T
Q  206 at-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||          |||||||||||||||||||||||||||||||||||||||| |||||    
T  2477807 ataaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgaaatttt 2477750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 103 - 262
Target Start/End: Original strand, 38899516 - 38899677
Alignment:
Q  103 aaatggaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatc 201  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38899516 aaatggaaaatgctagatatcaagaatgattttataaaaaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatc 38899615  T
Q  202 tttcat-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||          || |||||||||||||||||||||||| ||||||| ||||||||||    
T  38899616 tttcataaaaaaaagatatataacacccaccaccccatgattttcggccagactgagatttt 38899677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 128 - 262
Target Start/End: Original strand, 11360947 - 11361082
Alignment:
Q  128 atgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat-nnnnnnnnntacataacac 226  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||          ||||||||||    
T  11360947 atgattttataagaaagattcaagaatgacatggcacaataatcatctttagatttcaatctaatttattaatctttcatacaaaaaaaatacataacac 11361046  T
Q  227 ccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||||||||||||||||||||||||||||    
T  11361047 ccaccaccccatgatttccggccaggctgagatttt 11361082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 4433845 - 4433958
Alignment:
Q  149 aagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcatnnnnnnnnntacataacacccaccaccccatgatttccggc 248  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||         |||||||||||||||| |||||||||||||||    
T  4433845 aagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttcataaaaaaaaatacataacacccaccatcccatgatttccggc 4433944  T
Q  249 caggctgagatttt 262  Q
    ||| ||||||||||    
T  4433945 cagactgagatttt 4433958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 107 - 207
Target Start/End: Original strand, 12614532 - 12614633
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    |||||||||||||||||||| |||||||||| | |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12614532 ggaaaatgctagatatcaagtatgattttatcaaaaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttc 12614631  T
Q  206 at 207  Q
    ||    
T  12614632 at 12614633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 22912852 - 22913005
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||| |||    
T  22912852 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt--tctctca 22912949  T
Q  207 tnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |         ||||||||| |||||||||||||||||| |||| | | ||||||||    
T  22912950 taaaaaaaaatacataacatccaccaccccatgatttctggcccgacagagatttt 22913005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 262
Target Start/End: Original strand, 31640767 - 31640891
Alignment:
Q  138 aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcatnnnnnnnnntacataacacccaccacccca 237  Q
    |||||| ||||||||||||||||||| |||||||  |||||||||    ||| ||||||||| |||||||         |||||||||||||||||||||    
T  31640767 aagaaagattcaagaatgacatggcagaataatcgactttagattgatatcttatttattaacctttcataaaaaaaaatacataacacccaccacccca 31640866  T
Q  238 tgatttccggccaggctgagatttt 262  Q
    |||||||||||||||||||||||||    
T  31640867 tgatttccggccaggctgagatttt 31640891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 17545477 - 17545567
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 197  Q
    ||||||||||||||||||||||||||||   || ||| ||| |||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  17545477 ggaaaatgctagatatcaagaatgatttatcaaaaaatatttaagaatgacatgacacaataatcatccttagatttcagtctcatttatt 17545567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 22913115 - 22913042
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | |||||||||||||||||||||||||| |||||||||| ||||||||    
T  22913115 aatgctatatatcaagaaagattttttcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 22913042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 2477640 - 2477713
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  2477640 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 2477713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 6043572 - 6043499
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||| | |||||||||| ||||||||    
T  6043572 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggaagaataatcacccttagattt 6043499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 8145387 - 8145452
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  8145387 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 8145452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 11361192 - 11361119
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  11361192 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 11361119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 10458409 - 10458469
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcaccttta 178  Q
    ||||||||||  ||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  10458409 atatcaagaaaaattttatcaagaaaaattcaagaatgacatggcaaaataatcaccttta 10458469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 3362782 - 3362855
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| | |||||||||||||||| ||||| |||| ||||||||    
T  3362782 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 3362855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 4434068 - 4433995
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  4434068 aatgctatatatcaagaaagatttttttaagaaaatttcaagaatgatatggcagaataatcacccttagattt 4433995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 4892206 - 4892279
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  4892206 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 4892279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 12614794 - 12614721
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| ||||||||||  ||||||| |||||| |||||||||||||||| || |||||||||| ||||||||    
T  12614794 aatgctatatatcaagaaatattttatcaagaaagattcaagaatgacatgacataataatcacccttagattt 12614721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 17545718 - 17545673
Alignment:
Q  138 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||    
T  17545718 aagaaaaattcaagaatgacatggcagaataatcaccattagattt 17545673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 25398242 - 25398315
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  25398242 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 25398315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 38899787 - 38899714
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| | |||||||||||||||| ||||| |||| ||||||||    
T  38899787 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 38899714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 13664791 - 13664736
Alignment:
Q  145 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaat 200  Q
    ||||||||||||||||  | |||||||||| |||||||||||||| ||||||||||    
T  13664791 attcaagaatgacatgatagaataatcacccttagatttcagtcttatttattaat 13664736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 27482077 - 27481952
Alignment:
Q  124 aagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttaga-tttcagtctcatttattaatctttcat-nnnnnnnnntaca 220  Q
    |||||||||||||| | |||| |||||||||||||||  || |||||||||||||||| ||| | ||| ||||||||| |||| ||          ||||    
T  27482077 aagaatgattttatcaaaaaagattcaagaatgacataacagaataatcacctttagatttttaatcttatttattaaccttttataaaaaaaaaataca 27481978  T
Q  221 taacacccaccaccccatgatttccg 246  Q
    ||||||||||||||||||||||||||    
T  27481977 taacacccaccaccccatgatttccg 27481952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 3522059 - 3521994
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||| |||||| | ||||||| ||||| |||||||||||| |||||||||| ||||||||    
T  3522059 atatcaagaaagattttttcaagaaaatttcaaaaatgacatggcagaataatcaccattagattt 3521994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 12850805 - 12850878
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| | ||| |||||||||||| ||||| |||| ||||||||    
T  12850805 aatgctatatatcaagaaagattttatcaagaaaattccaaaaatgacatggcagaataaccacccttagattt 12850878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 33584390 - 33584317
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||| ||||    
T  33584390 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 33584317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 17545594 - 17545636
Alignment:
Q  220 ataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||||||||||||||||||||||||||||| | | ||||||||    
T  17545594 ataacacccaccaccccatgatttccggcccgacagagatttt 17545636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 37321855 - 37321781
Alignment:
Q  111 aatgctagatatc-aagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| ||||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||| ||||    
T  37321855 aatgctatatatctaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 37321781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 31640973 - 31640928
Alignment:
Q  138 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||| ||||||||||||||||||| ||||| |||| ||||||||    
T  31640973 aagaaagattcaagaatgacatggcagaataaccacccttagattt 31640928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 137
Target Start/End: Complemental strand, 12614511 - 12614483
Alignment:
Q  109 aaaatgctagatatcaagaatgattttat 137  Q
    |||||||||||||||||||||||||||||    
T  12614511 aaaatgctagatatcaagaatgattttat 12614483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 8e-64; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 105 - 262
Target Start/End: Complemental strand, 33380479 - 33380321
Alignment:
Q  105 atggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33380479 atggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 33380380  T
Q  205 ca-tnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    || |         ||||||||||||||||||||||||||||||||||||||||||||||    
T  33380379 cattaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagatttt 33380321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 106 - 262
Target Start/End: Complemental strand, 35161030 - 35160871
Alignment:
Q  106 tggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35161030 tggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 35160931  T
Q  206 at---nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||            ||||||||||||||||||||||||||||||||||||||||||||||    
T  35160930 ataaaaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagatttt 35160871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 104 - 262
Target Start/End: Complemental strand, 10662161 - 10662001
Alignment:
Q  104 aatggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10662161 aatggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctt 10662062  T
Q  204 tcat--nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||           ||||||||||||||||||| ||||||||||||||||||||||||||    
T  10662061 tcataaaaaaaaagatacataacacccaccaccctatgatttccggccaggctgagatttt 10662001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 103 - 262
Target Start/End: Original strand, 7475299 - 7475459
Alignment:
Q  103 aaatggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatct 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||    
T  7475299 aaatggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgatatgacataataatcacctttagatttcagtctcatttattaatct 7475398  T
Q  203 ttcat-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||||          ||||||||||||||||||||||||||||||||||||||||||||||    
T  7475399 ttcataaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagatttt 7475459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 23267857 - 23268013
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23267857 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 23267956  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||||||||||||||||||||||||| ||||||||||    
T  23267957 taaaaaaaagatacataacacccaccaccccatgatttccggccagactgagatttt 23268013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 104 - 262
Target Start/End: Original strand, 9293367 - 9293527
Alignment:
Q  104 aatggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 203  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  9293367 aatggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaatctt 9293466  T
Q  204 tcat--nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||           ||||||||||||||||||||||||||||||||||||||||||||||    
T  9293467 tcataaaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagatttt 9293527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 111 - 262
Target Start/End: Complemental strand, 3989342 - 3989190
Alignment:
Q  111 aatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat-nn 209  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||       
T  3989342 aatgctagatatcaagaatgattttataagaaagatccaagaatgacatgacacaataataacctttagatttcagtctcatttattaatctttcataaa 3989243  T
Q  210 nnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
           ||||||||||||||||||||||||||||||||||| ||||||||||    
T  3989242 aaaaaaatacataacacccaccaccccatgatttccggccagactgagatttt 3989190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 110 - 262
Target Start/End: Original strand, 31174633 - 31174785
Alignment:
Q  110 aaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcatnn 209  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| | ||||||||||||| |||||||||||||||||||||      
T  31174633 aaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataaactcctttagatttcaatctcatttattaatctttcataa 31174732  T
Q  210 nnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
           ||||||||||||||||||||||||||||||| ||| ||||||||||    
T  31174733 aaaaaaatacataacacccaccaccccatgatttccggtcagactgagatttt 31174785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 13355118 - 13354960
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13355118 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttca 13355019  T
Q  207 t--nnnnnnnnntacataacacccaccaccccatgatttccggccaggct-gagatttt 262  Q
    |           ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  13355018 taaaaaaaaaaatacataacacccaccactccatgatttccggccaggctagagatttt 13354960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 43331182 - 43331092
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 197  Q
    ||||||||||||||||||||||||||||   |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43331182 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttatt 43331092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 148 - 262
Target Start/End: Complemental strand, 21936311 - 21936195
Alignment:
Q  148 caagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat-nnnnnnnnntacataacacccaccaccccatgatttccg 246  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||          ||||||||||||||||||||||||||||||    
T  21936311 caagaatgacatggcacaataatcacctttagatttcagtttcatttattaatctttcataaaaaaaaaatacataacacccaccaccccatgatttccg 21936212  T
Q  247 gccaggct-gagatttt 262  Q
    |||||||| ||||||||    
T  21936211 gccaggctagagatttt 21936195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 105 - 262
Target Start/End: Complemental strand, 9723679 - 9723519
Alignment:
Q  105 atggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 203  Q
    |||||||||| ||||||||||||||||||| || |||||| ||| |||||||||||| || ||||||||||||||||||||||||| ||||||| |  ||    
T  9723679 atggaaaatgttagatatcaagaatgatttgatcaagaaatatttaagaatgacatgacagaataatcacctttagatttcagtcttatttattcacttt 9723580  T
Q  204 tcat--nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||           |||||||||||||||||||||||||||||||  |||||||||||||    
T  9723579 tcataaaaaaaaaaatacataacacccaccaccccatgatttccggtgaggctgagatttt 9723519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 22592983 - 22592880
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttaga--tttcagtctcatttattaatctt 203  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||  ||||||||| ||||||||| |||    
T  22592983 ggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttttcagtcttatttattaacctt 22592884  T
Q  204 tcat 207  Q
    ||||    
T  22592883 tcat 22592880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 109 - 197
Target Start/End: Original strand, 21393483 - 21393570
Alignment:
Q  109 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 197  Q
    ||||||||||||||||||||||||||   ||||||| ||||||||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  21393483 aaaatgctagatatcaagaatgatttatcaagaaaa-ttcaagaatgacatgacacaataatcacccttaaatttcagtctcatttatt 21393570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 16767288 - 16767357
Alignment:
Q  138 aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 207  Q
    |||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||||    
T  16767288 aagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttcat 16767357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 34320963 - 34321042
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 197  Q
    |||||||||||||||||||||||||||||           |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34320963 ggaaaatgctagatatcaagaatgatttt-----------tcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 34321042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 14941427 - 14941354
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  14941427 aatgctatatatcaagaaagattttattaagaaagattcaagaatgacatggcagaataatcacccttagattt 14941354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 152
Target Start/End: Complemental strand, 39819319 - 39819272
Alignment:
Q  105 atggaaaatgctagatatcaagaatgattttataagaaaaattcaaga 152  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  39819319 atggaaaatgttagatatcaagaatgattttataagaaaaattcaaga 39819272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 14941199 - 14941317
Alignment:
Q  147 tcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat----nnnnnnnnntacataacacccaccaccccatgatt 242  Q
    |||||||||||||| ||||||||||| | |||||||||| ||| ||||||||| |||||||             |||||||||||||||||| |||||||    
T  14941199 tcaagaatgacatgacacaataatcatccttagatttcaatcttatttattaacctttcataaaataaaaaaaatacataacacccaccacctcatgatt 14941298  T
Q  243 tccggccaggctgagattt 261  Q
    || ||||||||||||||||    
T  14941299 tctggccaggctgagattt 14941317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 9293637 - 9293564
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  9293637 aatgctatatatcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatcacccttagattt 9293564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 10661891 - 10661964
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  10661891 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 10661964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 21936085 - 21936158
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  21936085 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 21936158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 23268123 - 23268050
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  23268123 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 23268050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 31174887 - 31174822
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  31174887 atatcaagaaagattttattaagaaaatttcaagaatgacatggcagaataatcacccttagattt 31174822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 35160761 - 35160834
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  35160761 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 35160834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 43330916 - 43330989
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | || ||||||||||||||||||||||| |||||||||| ||||||||    
T  43330916 aatgctatatatcaagaaagattttctcaaaaaaaattcaagaatgacatggcagaataatcacccttagattt 43330989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 37335894 - 37335824
Alignment:
Q  128 atgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 197  Q
    |||||||||| |||||| ||| || ||||||||| |||| |||||||| ||||||||||||||||||||||    
T  37335894 atgattttatcaagaaagatttaataatgacatgacacagtaatcacccttagatttcagtctcatttatt 37335824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 16767378 - 16767423
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  16767378 tacataacacccaccaccctatgatttccggccagactgagatttt 16767423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 27847791 - 27847746
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||||||||||||||||||||||||||| || ||||||||||||||    
T  27847791 tacataacacccaccaccccatgatttctggtcaggctgagatttt 27847746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 40262531 - 40262687
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||  |||  | ||   ||||||||||||||||| | |||||| ||  |||||||||||| | |||| ||||  |||||    
T  40262531 ggaaaatgctagatatcaagaatggattttcacgatggattcaagaatgacatggtagaataataactcttagatttcagttttatttgttaacgtttca 40262630  T
Q  207 tnnnnnnnnn-tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          |||||||||||||||||||||| |||||||| |||| |||||||||    
T  40262631 taaaaaataaatacataacacccaccaccccataatttccggtcagggtgagatttt 40262687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 7475569 - 7475496
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||  | |||||||||| ||||||||    
T  7475569 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgatagaataatcacccttagattt 7475496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 13354858 - 13354923
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||| ||| ||||||||    
T  13354858 atatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataattacccttagattt 13354923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 21393749 - 21393676
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| ||||||||||  ||||| | |||||||||| ||||||||||||| | |||||||||| ||||||||    
T  21393749 aatgctatatatcaagaaaaattttctcaagaaaaatttaagaatgacatggtagaataatcacccttagattt 21393676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 27847644 - 27847709
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||| ||||| |||||||| |||||| |||||||||||||||| || |||||||||| ||||||||    
T  27847644 atataaagaaagattttattaagaaagattcaagaatgacatgacagaataatcaccgttagattt 27847709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 33380211 - 33380284
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||  |||||||||| ||||||||    
T  33380211 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggctgaataatcacccttagattt 33380284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 37335744 - 37335789
Alignment:
Q  137 taagaaaaattcaagaatgacatggcacaataatcacctttagatt 182  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  37335744 taagaaagattcaagaatgacatggcagaataatcacttttagatt 37335789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 249
Target Start/End: Original strand, 21393594 - 21393626
Alignment:
Q  217 tacataacacccaccaccccatgatttccggcc 249  Q
    |||||||||||||||||||||||||||||||||    
T  21393594 tacataacacccaccaccccatgatttccggcc 21393626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 249
Target Start/End: Complemental strand, 43331071 - 43331039
Alignment:
Q  217 tacataacacccaccaccccatgatttccggcc 249  Q
    |||||||||||||||||||||||||||||||||    
T  43331071 tacataacacccaccaccccatgatttccggcc 43331039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 22591639 - 22591596
Alignment:
Q  219 cataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||| ||||||||||||||||||||| || |||||||||||||    
T  22591639 cataatacccaccaccccatgatttcctgctaggctgagatttt 22591596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 3989108 - 3989153
Alignment:
Q  138 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  3989108 aagaaaattttaagaatgacatggcagaataatcacccttagattt 3989153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 9723409 - 9723482
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||| ||||| |||||||| |||||| ||| |||||||||||| || |||||||||| ||| ||||    
T  9723409 aatgctatatattaagaaagattttattaagaaagatttaagaatgacatgacagaataatcacccttaaattt 9723482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 22591494 - 22591547
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 171  Q
    |||||||||| |||||||| || |||||||||||||||| |||||| |||||||    
T  22591494 atatcaagaaagattttattaaaaaaaattcaagaatgatatggcagaataatc 22591547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 132
Target Start/End: Complemental strand, 21936341 - 21936313
Alignment:
Q  104 aatggaaaatgctagatatcaagaatgat 132  Q
    |||||||||||||||||||||||||||||    
T  21936341 aatggaaaatgctagatatcaagaatgat 21936313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 48124 - 47964
Alignment:
Q  102 gaaatggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatc 201  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  48124 gaaatggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatagcacaataatcatctttagatttcagtctcatttattaatc 48025  T
Q  202 tttcatnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||         ||||||||||||||||||||||||||||||||||||||||||||||    
T  48024 tttcataaaaataaatacataacacccaccaccccatgatttccggccaggctgagatttt 47964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 47854 - 47927
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||  ||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  47854 aatgctatttatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 47927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 7e-61; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 105 - 262
Target Start/End: Complemental strand, 24395243 - 24395086
Alignment:
Q  105 atggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 204  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24395243 atggaaaatgctagatatcaagaatgattttataaaaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 24395144  T
Q  205 catnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||         |||||||||||||||||||||||||||||||||||| |||||||||    
T  24395143 cataaaaataaatacataacacccaccaccccatgatttccggccaggttgagatttt 24395086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 3962248 - 3962093
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3962248 ggaaaatgctagatatcaagaatgattttataagaaatatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 3962149  T
Q  207 tnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |         |||||||||||||||||||||||||||||||||| |||||||||||    
T  3962148 taaaaaaaaatacataacacccaccaccccatgatttccggccaagctgagatttt 3962093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 48880722 - 48880878
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  48880722 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacatttagatttcagtttcatttattaatctttca 48880821  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||||||||||||||||||||||||||||||||||||    
T  48880822 taaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagatttt 48880878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 45637981 - 45637826
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45637981 ggaaaatgctagatattaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 45637882  T
Q  207 tnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |         ||||||||| ||||||||||||||||||||||||| ||||||||||    
T  45637881 taaaaaaaaatacataacatccaccaccccatgatttccggccagactgagatttt 45637826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 103 - 262
Target Start/End: Complemental strand, 30848843 - 30848683
Alignment:
Q  103 aaatggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatct 202  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30848843 aaatggaaaatgctagatatcaagaatgcttttataagaaaaattcaagaatgacatggcacaataatcacctttaaatttcagtctcatttattaatct 30848744  T
Q  203 ttcat-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||||          |||||||||||||| | |||||||||||||||||| ||||||||||    
T  30848743 ttcataaaaaaaagatacataacacccactatcccatgatttccggccagactgagatttt 30848683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 42612081 - 42611925
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42612081 ggaaaatgctagatatcaagaatgattttataagaaagatctaagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttca 42611982  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||||||||||||||||||||| ||| |||| |||||    
T  42611981 taaaaaaaaaatacataacacccaccaccccatgatttccggtcagactgaaatttt 42611925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 35445667 - 35445567
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  35445667 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgatatgacacaataatcacctttagatttcagtctcatttattaatctttca 35445568  T
Q  207 t 207  Q
    |    
T  35445567 t 35445567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 109 - 262
Target Start/End: Original strand, 4974532 - 4974686
Alignment:
Q  109 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat- 207  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||     
T  4974532 aaaatgctagatatcaagaatgattttataaaaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcata 4974631  T
Q  208 nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
             |||||||||||||||||| |||||||||||||||  ||||||||||    
T  4974632 aaaaaaaaatacataacacccaccacctcatgatttccggccaaactgagatttt 4974686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 15329544 - 15329387
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15329544 ggaaaatgctagatataaagaatgattttataagaaatattcaagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttca 15329445  T
Q  207 t--nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |            | ||||||| |||||||||||||||||||||||| ||||||||||    
T  15329444 taaaaaataaaaaaaataacactcaccaccccatgatttccggccagtctgagatttt 15329387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 25167651 - 25167801
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||    
T  25167651 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctca------aatctttca 25167744  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  25167745 taaaaaaaagatacataacacccatcaccccatgatttccggccagactgagatttt 25167801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 107 - 260
Target Start/End: Original strand, 15577642 - 15577799
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  15577642 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatgtcacaataatcacctttagatttcagtctcatttattaatctttta 15577741  T
Q  207 t----nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatt 260  Q
    |             |||||||||||||||| |||||||||||||||||| ||||||||    
T  15577742 taaaaaaaaaaaaatacataacacccaccaacccatgatttccggccagactgagatt 15577799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 34483108 - 34482949
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34483108 ggaaaatgttagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttca 34483009  T
Q  207 t-----nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |              |||||||||||||||| |||||||||||||||||| ||||||||||    
T  34483008 taaaaataaaaaaaatacataacacccacca-cccatgatttccggccagactgagatttt 34482949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 104 - 207
Target Start/End: Complemental strand, 35876517 - 35876414
Alignment:
Q  104 aatggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 203  Q
    |||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35876517 aatggaaaatgctagatatcaagaatgattttataagaaatatctaaaaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 35876418  T
Q  204 tcat 207  Q
    ||||    
T  35876417 tcat 35876414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 42696354 - 42696197
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    |||||||| |||||||||| ||||||||||| || ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||  ||||    
T  42696354 ggaaaatgttagatatcaataatgattttatcaaaaaaaattcaagaatgacatggtacaataatcacccttagatttcagtctcatttattaacttttc 42696255  T
Q  206 at-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||          ||||||||| |||||||||| ||||||||||||||| |||||||||    
T  42696254 ataaaaaaaaaatacataacatccaccaccccttgatttccggccaggttgagatttt 42696197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 197
Target Start/End: Original strand, 37476876 - 37476965
Alignment:
Q  108 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 197  Q
    |||||||||||||||||||||||||||   |||||| ||| || ||||||||||||||||||||||| ||||||||||||||||||||||    
T  37476876 gaaaatgctagatatcaagaatgatttatcaagaaagatttaataatgacatggcacaataatcacccttagatttcagtctcatttatt 37476965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 207
Target Start/End: Complemental strand, 29737406 - 29737314
Alignment:
Q  116 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 207  Q
    |||||||||||||||||||||| |||||| ||| |||||| ||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  29737406 tagatatcaagaatgattttatcaagaaagatttaagaataacatgtcacaataatcacccttagatttcagtctcatttattaacctttcat 29737314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 262
Target Start/End: Original strand, 20009895 - 20010049
Alignment:
Q  109 aaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 207  Q
    |||||| ||||||||| |||||||||||| | |||| |||||||||||||||| |||||||||||   |||||||| ||||||||||||||| |||| ||    
T  20009895 aaaatgatagatatcatgaatgattttatcaaaaaagattcaagaatgacatgacacaataatcatacttagattttagtctcatttattaacctttaat 20009994  T
Q  208 nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
             |||||||||||||  ||||||| ||||||||||||| |||||||||    
T  20009995 aagaaaaaatacataacacccataaccccataatttccggccaggttgagatttt 20010049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 15238654 - 15238564
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 197  Q
    ||||||||||||||||||||||||||||   || ||| ||| |||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  15238654 ggaaaatgctagatatcaagaatgatttatcaaaaaatatttaagaatgacatgacacaataatcatccttagatttcagtctcatttatt 15238564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 18037247 - 18037157
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 197  Q
    ||||||||||||||||||| ||||||||   |||||| ||| ||||||||||||| |||||||||||| ||||||||||||| ||||||||    
T  18037247 ggaaaatgctagatatcaacaatgatttatcaagaaagatttaagaatgacatggtacaataatcacccttagatttcagtcacatttatt 18037157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 4974796 - 4974723
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  4974796 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 4974723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 42611815 - 42611888
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  42611815 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 42611888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 45637716 - 45637789
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  45637716 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 45637789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 15577911 - 15577841
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttaga 180  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| |||||    
T  15577911 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttaga 15577841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 15329277 - 15329350
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  15329277 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 15329350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 34482839 - 34482912
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  34482839 aatgctatatatcaagaaagattttattaagaaaattttaagaatgacatggcagaataatcacccttagattt 34482912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 48880988 - 48880915
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  48880988 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 48880915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 15238414 - 15238459
Alignment:
Q  138 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||    
T  15238414 aagaaaaattcaagaatgacatggcagaataatcaccattagattt 15238459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 24394976 - 24395049
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||  ||||||||||||    
T  24394976 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataacaacctttagattt 24395049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 35444562 - 35444635
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||| ||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  35444562 aatgctatatattaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 35444635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 36790267 - 36790336
Alignment:
Q  103 aaatggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 171  Q
    ||||||||||||||| ||||||| |||| |||||| || ||| |||||||||||||||| ||||||||||    
T  36790267 aaatggaaaatgctaaatatcaataatggttttatcaacaaagattcaagaatgacatgacacaataatc 36790336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 40880640 - 40880706
Alignment:
Q  106 tggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcac 173  Q
    ||||||||||||||||||||||||||||| ||  |||| ||| || ||| ||||||||||||||||||    
T  40880640 tggaaaatgctagatatcaagaatgatttgat-tgaaagattaaaaaataacatggcacaataatcac 40880706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 35444714 - 35444672
Alignment:
Q  220 ataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  35444714 ataacacccaccatcccatgattttcggccaggctgagatttt 35444672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 37477141 - 37477079
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatca 172  Q
    ||||||| |||||||||| |||||| | |||||||||| ||||||||||||||| ||||||||    
T  37477141 aatgctatatatcaagaaagattttctcaagaaaaatttaagaatgacatggcagaataatca 37477079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 3961983 - 3962056
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||||| ||| ||||    
T  3961983 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatcacccttaaattt 3962056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 18036990 - 18037055
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||| |||||| | |||||||||| ||||||||||||||| |||||||||| ||| ||||    
T  18036990 atatcaagaaagattttttcaagaaaaatttaagaatgacatggcagaataatcacccttaaattt 18037055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 25167911 - 25167838
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||| | ||||||||    
T  25167911 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatcatccttagattt 25167838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 29737143 - 29737216
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||| | |||||||||| ||||||||    
T  29737143 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggtagaataatcacccttagattt 29737216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 36790527 - 36790454
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| | |||||| |||||||||| ||||||||||||||| |||||| ||| ||| ||||    
T  36790527 aatgctatatatcaagaaagtttttatcaagaaaaatttaagaatgacatggcagaataattacccttaaattt 36790454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 37476986 - 37477031
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||||||||||||||||||||||||| | | ||||||||    
T  37476986 tacataacacccaccaccccatgatttccggcccgacagagatttt 37477031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 15238538 - 15238496
Alignment:
Q  220 ataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||||||||||||||||||||||||||||| | | ||||||||    
T  15238538 ataacacccaccaccccatgatttccggcccgacagagatttt 15238496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 18037137 - 18037092
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||||||||||||||||||||||||||| |||| | | ||||||||    
T  18037137 tacataacacccaccaccccatgatttctggcccgacagagatttt 18037092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 29737298 - 29737253
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||||||| ||||| |||||||||||||||| |||| |||||||||    
T  29737298 tacataactcccactaccccatgatttccggtcaggttgagatttt 29737253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 3e-60; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 3137209 - 3137365
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3137209 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 3137308  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||| ||||||||||||||||||||||||||||||||    
T  3137309 tacaaaaaagatacataacacccatcaccccatgatttccggccaggctgagatttt 3137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 105 - 262
Target Start/End: Original strand, 19650693 - 19650850
Alignment:
Q  105 atggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 204  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19650693 atggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatcttt 19650792  T
Q  205 catnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||         |||||||||||||||||||||||||||||||||| |||||||||||    
T  19650793 cataaaaaaaaatacataacacccaccaccccatgatttccggccaagctgagatttt 19650850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 22426140 - 22426295
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22426140 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacatttagatttcagtctcatttattaatctttca 22426239  T
Q  207 tnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |         ||||||||||||||||||||||||||||||||||| |||| |||||    
T  22426240 taaaaaaaaatacataacacccaccaccccatgatttccggccagactgaaatttt 22426295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 105 - 252
Target Start/End: Complemental strand, 30385672 - 30385525
Alignment:
Q  105 atggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 204  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30385672 atggaaaatgctaaatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 30385573  T
Q  205 catnnnnnnnnntacataacacccaccaccccatgatttccggccagg 252  Q
    |||         ||||||||||||||||||||||||||||||||||||    
T  30385572 cataaaaataaatacataacacccaccaccccatgatttccggccagg 30385525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 106 - 262
Target Start/End: Complemental strand, 37522324 - 37522167
Alignment:
Q  106 tggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37522324 tggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcataataatcacctttagatttcagtctcatttattaatctttc 37522225  T
Q  206 at-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||          |||||||||||||||||||||| ||||||||||||| |||||||||    
T  37522224 ataaaaaaaagatacataacacccaccaccccataatttccggccaggttgagatttt 37522167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 33114064 - 33113907
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33114064 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttca 33113965  T
Q  207 t--nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |           ||||||||||||||||||||||||||||||||||| |||| |||||    
T  33113964 taaaaaaaaaaatacataacacccaccaccccatgatttccggccagactgaaatttt 33113907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 3456334 - 3456178
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||    
T  3456334 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacactaatcatctttagatttcagtctcatttattaatctttca 3456235  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||||||||||||||||||||||||| ||||||||||    
T  3456234 taaaaaaaaaatacataacacccaccaccccatgatttccggccagactgagatttt 3456178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 3574321 - 3574477
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  3574321 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctctagatttcagtctcatttattaatctttca 3574420  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          |||||||||||||||||||||||||||||||||| |||||||||||    
T  3574421 taaaaaaaaaatacataacacccaccaccccatgatttccggccaagctgagatttt 3574477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 107 - 207
Target Start/End: Original strand, 34482683 - 34482783
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34482683 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 34482782  T
Q  207 t 207  Q
    |    
T  34482783 t 34482783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 106 - 262
Target Start/End: Complemental strand, 3089690 - 3089531
Alignment:
Q  106 tggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    |||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3089690 tggaaaatgctagatatcaagaatgattttataagaaagatctaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 3089591  T
Q  206 at---nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||            |||||| ||||||||||||||||||||||||||| |||||||||||    
T  3089590 ataaaaaaaaataatacatagcacccaccaccccatgatttccggccaagctgagatttt 3089531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 37216848 - 37217004
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37216848 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttca 37216947  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||||||||| ||||||| | || |||||||||||||    
T  37216948 taaaaaaaaaatacataacacccaccaccctatgattttcagcaaggctgagatttt 37217004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 6042147 - 6041998
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6042147 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatttttca 6042048  T
Q  207 tnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          | |||||| ||||||||||||||||||||| ||||||||||||||    
T  6042047 taaaa------aaataacaaccaccaccccatgatttccggtcaggctgagatttt 6041998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 105 - 262
Target Start/End: Complemental strand, 2754991 - 2754831
Alignment:
Q  105 atggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 204  Q
    ||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2754991 atggaaaatgctagatatcaagaatcattttataagaaagatttaagaatgacatggcacaataatcacctttaaatttcagtctcatttattaatcttt 2754892  T
Q  205 cat---nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||            |||||||||||||| |||||||||||||||| ||||||||||||||    
T  2754891 cataaaaaaaaaaaatacataacacccactaccccatgatttccggtcaggctgagatttt 2754831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 108 - 262
Target Start/End: Original strand, 8320378 - 8320535
Alignment:
Q  108 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 207  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8320378 gaaaatgctagatatcaataatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 8320477  T
Q  208 --nnnnnnnnntacataacacccacca-ccccatgatttccggccaggctgagatttt 262  Q
               |||||||||||||| | |||||||||||| |||||||||||||||||    
T  8320478 aaaaaaaaaaatacataacacccactacccccatgatttctggccaggctgagatttt 8320535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 48161176 - 48161019
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| || |||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  48161176 ggaaaatgctagatatcaagaatgattttataagaaatatccaagaacgacatgacacaataatcacctttagatttcagtctcatttattaatttttca 48161077  T
Q  207 t--nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |           ||||||||||||||||||||||| |||||||| |||||||||||||    
T  48161076 taaaaaaaaaaatacataacacccaccaccccatggtttccggctaggctgagatttt 48161019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 109 - 262
Target Start/End: Complemental strand, 33145980 - 33145826
Alignment:
Q  109 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat- 207  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||| ||||||||| |||||||     
T  33145980 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtcttatttattaacctttcata 33145881  T
Q  208 nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
             |||||| ||||||||||| ||| |||||||| ||||||||||||||    
T  33145880 aaaaaaaaatacataccacccaccacctcataatttccggtcaggctgagatttt 33145826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 98 - 262
Target Start/End: Complemental strand, 47738391 - 47738219
Alignment:
Q  98 atatgaaatggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttat 196  Q
    |||| |||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  47738391 atataaaatggaaaatgttagatatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatcatccttagatttcagtctcatttat 47738292  T
Q  197 taatctttc-------atnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||| |||||       ||         |||||||||||||||||||||||||||| || ||||||||||||||    
T  47738291 taacctttcataaaaaataaaaaaaaatacataacacccaccaccccatgatttctggtcaggctgagatttt 47738219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 107 - 249
Target Start/End: Original strand, 36864827 - 36864969
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    ||||||||||||||||||||||||||||||| | |||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||  ||||    
T  36864827 ggaaaatgctagatatcaagaatgattttatcaaaaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacatttc 36864926  T
Q  206 atnnnnnnnnntacataacacccaccaccccatgatttccggcc 249  Q
    ||         |||||||||||||||| ||||||||||||||||    
T  36864927 at-ataaaaaatacataacacccaccatcccatgatttccggcc 36864969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 105 - 207
Target Start/End: Complemental strand, 26613019 - 26612916
Alignment:
Q  105 atggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 203  Q
    |||||||||| |||||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||    
T  26613019 atggaaaatgttagatatcaataatgattttattaagaaagattcaagaataacatggcacaataatcacccttagatttcagtctcatttattaacctt 26612920  T
Q  204 tcat 207  Q
    ||||    
T  26612919 tcat 26612916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 40328102 - 40328011
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 197  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||||||| |||||||    
T  40328102 ggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttcagtcttatttatt 40328011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 8361834 - 8361924
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 197  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  8361834 ggaaaatgctagatatcaagaatgatttatcaagaaatattcaagaatgacatgacacaataatcacccttagatttcagtctcatttatt 8361924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 42921394 - 42921295
Alignment:
Q  109 aaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 207  Q
    |||||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||||||    
T  42921394 aaaatgctagatattaagaatgattttatcaagaaatatttaagaatgacatggcacaacaatcacccttaaatttcagtctcatttattaacctttcat 42921295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 9796824 - 9796914
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 197  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  9796824 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatgtcacaataatcactcttagatttcagtctcatttatt 9796914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 41224504 - 41224414
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 197  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||| ||| |||||| |||||||||||    
T  41224504 ggaaaatgctagatatcaagaatgatttatcaagaaatattcaagaatgacatggcacaataatcacccttaaatttcaatctcatttatt 41224414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 207
Target Start/End: Complemental strand, 33839794 - 33839705
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 207  Q
    ||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| |||||||    
T  33839794 atatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttaaatttcagtctcatttattaacctttcat 33839705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 103 - 262
Target Start/End: Complemental strand, 42298126 - 42297978
Alignment:
Q  103 aaatggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatct 202  Q
    ||||||||||||||| |||||||||||||||||||          ||||||||||||| |||||||| |||| |||||||||||||||||||||||| ||    
T  42298126 aaatggaaaatgctaaatatcaagaatgattttat----------caagaatgacatgacacaataaccacccttagatttcagtctcatttattaacct 42298037  T
Q  203 ttcatnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||||         ||||||||| | ||||||||||||||||||||||| ||||||||||    
T  42298036 ttcat-aaaaaaaatacataacatctaccaccccatgatttccggccagactgagatttt 42297978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 46919164 - 46919064
Alignment:
Q  108 gaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||| |||||||||||||||||||||| | |||| |||||| |||||||||||| ||||||||||| |||||||| |||| |||||||||||| |||    
T  46919164 gaaaatgttagatatcaagaatgattttatcaaaaaagattcaataatgacatggcagaataatcacctctagatttcggtcttatttattaatctatca 46919065  T
Q  207 t 207  Q
    |    
T  46919064 t 46919064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 206
Target Start/End: Complemental strand, 24343823 - 24343720
Alignment:
Q  104 aatggaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatct 202  Q
    ||||||||||| |||||||||||||||||||||| | |||| ||||||||||||||||  |  ||||||||| |||||||||||||| ||||||||| ||    
T  24343823 aatggaaaatgttagatatcaagaatgattttatcaaaaaagattcaagaatgacatgatatgataatcacccttagatttcagtcttatttattaacct 24343724  T
Q  203 ttca 206  Q
    ||||    
T  24343723 ttca 24343720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 2754721 - 2754794
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  2754721 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacctttagattt 2754794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 30385170 - 30385125
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  30385170 tacataacacccaccaccccatgatttccggccaggctgagatttt 30385125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 262
Target Start/End: Original strand, 41883031 - 41883174
Alignment:
Q  122 tcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat--nnnnnnnnnta 218  Q
    |||| ||||||||||| |||||| ||||||||||||||||| | |||||||| |||| ||||||||||| |||||| || |||| ||           ||    
T  41883031 tcaaaaatgattttatgaagaaagattcaagaatgacatggtaaaataatcatctttggatttcagtcttatttatcaaccttttataaaaaaaaaaata 41883130  T
Q  219 cataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||    
T  41883131 cataacacccaccaccccatgatttctagccagtctgagatttt 41883174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 3137475 - 3137402
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  3137475 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcaaaataatcacccttagattt 3137402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 3574588 - 3574515
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  3574588 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 3574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 6041888 - 6041961
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  6041888 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 6041961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 9797082 - 9797017
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||| |||||| | |||||||||||||||||||||||||| |||||||||| ||||||||    
T  9797082 atatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcaccattagattt 9797017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 33145717 - 33145789
Alignment:
Q  111 aatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| | |||| || ||||||||||||||| |||||||||| ||||||||    
T  33145717 aatgctatatatcaagaaagattttattaaaaaattttaagaatgacatggcagaataatcacccttagattt 33145789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 8362078 - 8362033
Alignment:
Q  138 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||    
T  8362078 aagaaaaattcaagaatgacatggcagaataatcacccttagattt 8362033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 11347272 - 11347345
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||| ||| ||||||||    
T  11347272 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataataacccttagattt 11347345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 262
Target Start/End: Original strand, 34482824 - 34482861
Alignment:
Q  225 acccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34482824 acccaccaccccatgatttccggccaggctgagatttt 34482861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 37217114 - 37217041
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||| ||||    
T  37217114 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 37217041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 40327984 - 40327939
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||    
T  40327984 tacataacacccaccaccctatgatttccggccaggttgagatttt 40327939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 42297513 - 42297468
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  42297513 tacataacatccaccaccccatgatttccggtcaggctgagatttt 42297468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 47738117 - 47738182
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||| |||||||| |||||| |||||||||||| |||||| |||||| ||||||||||||    
T  47738117 atatcaagaaagattttatcaagaaatattcaagaatgatatggcagaataattacctttagattt 47738182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 19650953 - 19650888
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||| ||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  19650953 atattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcaccattagattt 19650888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 30385015 - 30385088
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||  ||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||||| ||| ||||    
T  30385015 aatgctatttatcaagaaagattttatcaagaaaatttcaaaaatgacatggcagaataatcacccttatattt 30385088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 34482971 - 34482898
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||| |||| | |||||||||| ||||||||    
T  34482971 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggtagaataatcacccttagattt 34482898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 41883256 - 41883211
Alignment:
Q  138 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||||||||||||||||||| |||||||||| ||| ||||    
T  41883256 aagaaaaattcaagaatgacatggcagaataatcacccttaaattt 41883211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 262
Target Start/End: Complemental strand, 11347476 - 11347382
Alignment:
Q  170 tcacctttagatttcagtctcatttattaatctttcatnnnnnnnnn--tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||||||||||||||| |||||||||||||| ||||||           ||||||||||||||||||||||||||||  ||||  ||||||||||    
T  11347476 tcacctttagatttcaatctcatttattaatttttcataaaaaaaaaaatacataacacccaccaccccatgatttctagccactctgagatttt 11347382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 8361951 - 8361996
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||| ||||||||||||||||||||||||||| | | ||||||||    
T  8361951 tacatgacacccaccaccccatgatttccggcccgacagagatttt 8361996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 22426397 - 22426332
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||| ||||| |||||||| ||||||| || || |||||||||||| |||||||||| ||||||||    
T  22426397 atattaagaaagattttatcaagaaaattttaaaaatgacatggcagaataatcacccttagattt 22426332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 24343706 - 24343661
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||||||||||| ||||||| ||| |||| |||||||||    
T  24343706 tacataacacccaccacccgatgattttcggtcaggatgagatttt 24343661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 26612797 - 26612862
Alignment:
Q  119 atatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| || |||||||||| |||| ||||||||||||||||||| ||||| ||  |||||||||    
T  26612797 atatcaaaaaagattttataaaaaaaaattcaagaatgacatggcagaataaccatttttagattt 26612862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 33839690 - 33839645
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||| ||||||||||||||| |||||||  |||||||||    
T  33839690 tacataacacctaccaccccatgatttacggccagattgagatttt 33839645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 246
Target Start/End: Complemental strand, 41224392 - 41224363
Alignment:
Q  217 tacataacacccaccaccccatgatttccg 246  Q
    ||||||||||||||||||||||||||||||    
T  41224392 tacataacacccaccaccccatgatttccg 41224363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 3e-60; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 19015674 - 19015518
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19015674 ggaaaatgctacatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 19015575  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||||||||||||||||||||||||||||||||||||    
T  19015574 tacaaaaaagatacataacacccaccaccccatgatttccggccaggctgagatttt 19015518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 6883757 - 6883601
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  6883757 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcataatattcacctttagatttcagtctcatttattaatctttca 6883658  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||||||||||||||||||||||||||||||||||||    
T  6883657 taaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagatttt 6883601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 36966503 - 36966659
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36966503 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaataacatggcacaataatcacctttagatttcagtctcatttattaatctttca 36966602  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||||||||||||||||||||||||| ||||||||||    
T  36966603 taaaaaaaagatacataacacccaccaccccatgatttccggccagactgagatttt 36966659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 41876237 - 41876393
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41876237 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttca 41876336  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||||||||||||||||| ||||||||||||||||||    
T  41876337 taaaaaaaagatacataacacccaccaccccatgattttcggccaggctgagatttt 41876393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 51737775 - 51737619
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51737775 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 51737676  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  51737675 taaaaaaaagatacataacacccaccaccccatgattttcggtcaggctgagatttt 51737619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 108 - 262
Target Start/End: Complemental strand, 40215257 - 40215102
Alignment:
Q  108 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 207  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40215257 gaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatatttcat 40215158  T
Q  208 -nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
              ||||||||||||||||||||||||||||||||||||||||||||||    
T  40215157 aaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagatttt 40215102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 106 - 262
Target Start/End: Original strand, 37821628 - 37821785
Alignment:
Q  106 tggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37821628 tggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttc 37821727  T
Q  206 at-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||          ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  37821728 ataaaaaaaagatacataacacccaacaccccatgattttcggccaggctgagatttt 37821785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 25463946 - 25463790
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25463946 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttaagtctcatttattaatctttca 25463847  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||||||||||||||||||||||||||||||||||||    
T  25463846 taaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagatttt 25463790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 44094967 - 44094812
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44094967 ggaaaatgctagatatcaagaattattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 44094868  T
Q  207 tnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |         ||||||||||||||||||||||||||||||||||| ||||||||||    
T  44094867 taaagaaaaatacataacacccaccaccccatgatttccggccagactgagatttt 44094812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 105 - 251
Target Start/End: Complemental strand, 25973679 - 25973534
Alignment:
Q  105 atggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  25973679 atggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttaaatttcagtctcatttattaatcttt 25973580  T
Q  205 catnnnnnnnnntacataacacccaccaccccatgatttccggccag 251  Q
    |||         ||||||||||||||||||||||||||| |||||||    
T  25973579 cat-aaaaaaaatacataacacccaccaccccatgattttcggccag 25973534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 20304925 - 20305082
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20304925 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatcaatctttca 20305024  T
Q  207 t--nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |           |||||||||||||||| |||||||||| |||||| |||||||||||    
T  20305025 taaaaaaaaaaatacataacacccaccatcccatgattttcggccaagctgagatttt 20305082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 3559887 - 3559731
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  3559887 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgatatgacacaataatcacctttatatttcagtctcatttattaatctttca 3559788  T
Q  207 tnnnnnnnnntaca-taacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |         |||| |||||||||||||||||||||||||| |||||||||||||||    
T  3559787 taaaaaaaaatacattaacacccaccaccccatgatttccgcccaggctgagatttt 3559731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 106 - 262
Target Start/End: Original strand, 9910085 - 9910244
Alignment:
Q  106 tggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  9910085 tggaaaatgttagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagacttatttattaatctttc 9910184  T
Q  206 at---nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||            | ||||||||||||||||||||||||||||||||  ||||||||||    
T  9910185 ataaaaaaaaaagatgcataacacccaccaccccatgatttccggccatactgagatttt 9910244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 18404718 - 18404618
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18404718 ggaaaatgctagatatcaagaatgattttataagaaagatttaagaatgacatggcacaataatcacatttagatttcagtctcatttattaatctttca 18404619  T
Q  207 t 207  Q
    |    
T  18404618 t 18404618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 32000059 - 32000151
Alignment:
Q  105 atggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 197  Q
    ||||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32000059 atggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 32000151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 33786426 - 33786516
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 197  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33786426 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 33786516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 40273976 - 40273888
Alignment:
Q  109 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 197  Q
    ||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40273976 aaaatgctagatatcaagaatgatttatcaagaaatattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 40273888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 19722893 - 19722970
Alignment:
Q  106 tggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  19722893 tggaaaatgttagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacctttagattt 19722970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 204
Target Start/End: Original strand, 44690818 - 44690914
Alignment:
Q  109 aaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 204  Q
    |||||| |||||||||| ||||||||||| |||||| ||||||||||||||||||| |||||||||| ||||||| |||||| ||||||||||||||    
T  44690818 aaaatgttagatatcaataatgattttatcaagaaagattcaagaatgacatggcagaataatcacccttagattccagtcttatttattaatcttt 44690914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 27523050 - 27523206
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    |||||||| || ||||||||||||||||||| |||||| ||||||||||   |||||| | |||||||| || ||||| ||||| |||||||||  ||||    
T  27523050 ggaaaatgttatatatcaagaatgattttatcaagaaagattcaagaatcgtatggcagattaatcaccctttgattttagtcttatttattaacttttc 27523149  T
Q  206 atnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||         ||||||||||||| |||||||||||||||||||||| |||||||||    
T  27523150 ataaaaaaaaatacataacacccatcaccccatgatttccggccaggatgagatttt 27523206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 10167670 - 10167569
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    |||||||| || |||| |||||||||||||||| |||| ||| |||||| | |||  ||||||||||||||||||||||||||| |||||||||| ||||    
T  10167670 ggaaaatgttacatattaagaatgattttataaaaaaatatttaagaataatatgatacaataatcacctttagatttcagtcttatttattaatttttc 10167571  T
Q  206 at 207  Q
    ||    
T  10167570 at 10167569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 183
Target Start/End: Complemental strand, 33786696 - 33786623
Alignment:
Q  110 aaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||| ||| ||||    
T  33786696 aaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttaaattt 33786623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 16045859 - 16045786
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  16045859 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 16045786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 40214992 - 40215065
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  40214992 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 40215065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 40273706 - 40273779
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||||||||||| |||||| | ||||||||||||||||||||||| || |||||||||| ||||||||    
T  40273706 aatgctagatatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatcacccttagattt 40273779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 18404446 - 18404519
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||| | |||||||||||||||||||    
T  18404446 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatcacctttagattt 18404519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 25463680 - 25463753
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  25463680 aatgctatatatcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatcacccttagattt 25463753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 44094702 - 44094775
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| ||||||||||  ||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  44094702 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 44094775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 179
Target Start/End: Original strand, 52064373 - 52064445
Alignment:
Q  108 gaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttag 179  Q
    |||||||||||||||||| ||||||||||| |||||| |||||||||||||||| || |||| ||||| ||||    
T  52064373 gaaaatgctagatatcaaaaatgattttatcaagaaagattcaagaatgacatgacagaatattcacccttag 52064445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 6883491 - 6883564
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||| ||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  6883491 aatgctatatattaagaaagatttttttaagaaaatttcaagaatgacatggcagaataatcacccttagattt 6883564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 9910354 - 9910281
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||| | ||||||||    
T  9910354 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcaaccttagattt 9910281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 19015408 - 19015481
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  19015408 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 19015481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 32000328 - 32000255
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||||||||||||||||||| || ||||| |||| ||||||||    
T  32000328 aatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatgacagaataaccacccttagattt 32000255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 36966769 - 36966696
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  36966769 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 36966696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 37821895 - 37821822
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  37821895 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 37821822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 44690935 - 44690980
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  44690935 tacataacacccaacaccccatgatttccggccagactgagatttt 44690980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 52329507 - 52329453
Alignment:
Q  145 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 199  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||| | |||||||    
T  52329507 attcaagaatgacatagcagaataatcacccttagatttcagtcttaattattaa 52329453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 3559621 - 3559694
Alignment:
Q  111 aatgctagatatcaagaatgattttataagaaaaattc-aagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| | |||||||  ||||||||||||||| |||||||||| ||| ||||    
T  3559621 aatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttaaattt 3559694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 40273861 - 40273816
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||||||||||||||||||||||||| | | ||||||||    
T  40273861 tacataacacccaccaccccatgatttccggcccgacagagatttt 40273816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 22157330 - 22157425
Alignment:
Q  104 aatggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 199  Q
    |||||||||||||||||||||| ||||| ||  || ||   ||| ||||||||||||| | |||||||||  ||| |||||| ||| |||||||||    
T  22157330 aatggaaaatgctagatatcaaaaatgaattcttatgatggatttaagaatgacatgggagaataatcacacttaaatttcaatcttatttattaa 22157425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 248
Target Start/End: Original strand, 32000173 - 32000204
Alignment:
Q  217 tacataacacccaccaccccatgatttccggc 248  Q
    ||||||||||||||||||||||||||||||||    
T  32000173 tacataacacccaccaccccatgatttccggc 32000204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 41876503 - 41876434
Alignment:
Q  111 aatgctagatatcaagaatgattttataagaaaaattc-aagaatgacatggcacaataatcacctttag 179  Q
    ||||||| |||||||||| |||||| | | |||||||  ||||||||||||||| |||||||||| ||||    
T  41876503 aatgctatatatcaagaaagattttttcaaaaaaattttaagaatgacatggcagaataatcacccttag 41876434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 52329427 - 52329383
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||| ||||||| |||||||| |||||||||||||||||    
T  52329427 tacataacacctaccaccc-atgatttctggccaggctgagatttt 52329383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 114; Significance: 7e-58; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 26206 - 26050
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26206 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 26107  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          |||||||||||||||| |||||||||||||||||| ||||||||||    
T  26106 taaaaaaaagatacataacacccaccatcccatgatttccggccagcctgagatttt 26050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 16254 - 16098
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16254 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttca 16155  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          |||||||||||||||| |||||||||||||||||| ||||||||||    
T  16154 taaaaaaaagatacataacacccaccatcccatgatttccggccagcctgagatttt 16098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 262
Target Start/End: Complemental strand, 8605 - 8516
Alignment:
Q  174 ctttagatttcagtctcatttattaatctttcatnnnnnnnnn-tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||||||||||||||||||||||||||          |||||||||||||||| |||||||||||||||||| ||||||||||    
T  8605 ctttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccatcccatgatttccggccagcctgagatttt 8516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 8414 - 8479
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  8414 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 8479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 15996 - 16061
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  15996 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 16061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 25948 - 26013
Alignment:
Q  119 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  25948 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 26013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 114; Significance: 7e-58; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 106 - 262
Target Start/End: Complemental strand, 41281 - 41125
Alignment:
Q  106 tggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  41281 tggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgatatggtacaataatcacctttagatttcagtctcatttattaatctttc 41182  T
Q  206 atnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||         ||||||||||||||||||||||||||||||||||||||||||||||    
T  41181 ataaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagatttt 41125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 41015 - 41088
Alignment:
Q  111 aatgctagatatcaagaatgattttataagaaaaatt-caagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| | ||||||| |||||||||||||||| |||||||||| ||||||||    
T  41015 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 41088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 7e-58; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 17175816 - 17175972
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17175816 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttca 17175915  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||||||||||||||||||||||||||||||||||||||||||    
T  17175916 taaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagatttt 17175972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 33696967 - 33696810
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33696967 ggaaaatgctagatatcaagaatgattttataagaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 33696868  T
Q  207 t--nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |           ||||||||||||||||||||||||||||||||||||||||||||||    
T  33696867 taaaaaaaaaattacataacacccaccaccccatgatttccggccaggctgagatttt 33696810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 106 - 262
Target Start/End: Original strand, 18365368 - 18365524
Alignment:
Q  106 tggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18365368 tggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttc 18365467  T
Q  206 atnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||         |||||||||||||| ||||||||||||||||||||| |||||||||    
T  18365468 ataaaaaaaaatacataacacccactaccccatgatttccggccaggatgagatttt 18365524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 106 - 262
Target Start/End: Original strand, 18370632 - 18370788
Alignment:
Q  106 tggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18370632 tggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttc 18370731  T
Q  206 atnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||         |||||||||||||| ||||||||||||||||||||| |||||||||    
T  18370732 ataaaaaaaaatacataacacccactaccccatgatttccggccaggatgagatttt 18370788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 105 - 262
Target Start/End: Original strand, 33695119 - 33695278
Alignment:
Q  105 atggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 204  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  33695119 atggaaaatgctagatatcaagaatgattttataagaaatatttaagaatgatatgtcacaataatcacctttagatttcagtctcatttattaatcttt 33695218  T
Q  205 cat--nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||           ||||||||||||||||||||||||||||||||||||||||||||||    
T  33695219 cataaaaaaaaaattacataacacccaccaccccatgatttccggccaggctgagatttt 33695278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 28675418 - 28675262
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  28675418 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacctttca 28675319  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          |||||||| |||||||||||||||||||||||||||||||||||||    
T  28675318 taaataaaaaatacataacccccaccaccccatgatttccggccaggctgagatttt 28675262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 32702475 - 32702319
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  32702475 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttca 32702376  T
Q  207 t-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |          ||||||| |||||||||||||||||||||||| || || |||||||    
T  32702375 taaaaaaaagatacataagacccaccaccccatgatttccggctagactcagatttt 32702319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 105 - 262
Target Start/End: Original strand, 2309216 - 2309374
Alignment:
Q  105 atggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 204  Q
    |||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  2309216 atggaaaatgctagatatcaacgatgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 2309315  T
Q  205 cat-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |||          |||||||||||||| ||||||||||||||||||| |||||||||||    
T  2309316 cataaaaaaaaaatacataacacccacaaccccatgatttccggccaagctgagatttt 2309374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 17705264 - 17705416
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  17705264 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacc-ttagatttcagtctcatttattaacctttca 17705362  T
Q  207 tnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |         |||||||||||||||| |||||||||||||||||| ||||||||||    
T  17705363 t--aaaaaattacataacacccaccatcccatgatttccggccagactgagatttt 17705416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 107 - 262
Target Start/End: Original strand, 23290876 - 23291035
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 206  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23290876 ggaaaatgctagatatcaaaaatgattttataagaaagattcaagaatgatatggcacaataattacctttagatttcagtctcatttattaatctttca 23290975  T
Q  207 t----nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    |             ||||||||||||| |||||||||||||| |||||||||||||||||    
T  23290976 taaaaaaaagaaaatacataacacccatcaccccatgatttctggccaggctgagatttt 23291035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 109 - 262
Target Start/End: Original strand, 6031537 - 6031692
Alignment:
Q  109 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat- 207  Q
    ||||| || |||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  6031537 aaaatactggatatcaagaatgattttataaaaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttttata 6031636  T
Q  208 -nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
              ||||||||||||||||||||||||||||||||||||||| ||||||    
T  6031637 aaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgggatttt 6031692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 145 - 262
Target Start/End: Original strand, 18889477 - 18889594
Alignment:
Q  145 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcatnnnnnnnnntacataacacccaccaccccatgatttc 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||| ||||||||||||||||||||    
T  18889477 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaatacataaaacccaccaccccatgatttc 18889576  T
Q  245 cggccaggctgagatttt 262  Q
    |||| |||||||||||||    
T  18889577 cggcaaggctgagatttt 18889594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 197
Target Start/End: Original strand, 11548386 - 11548474
Alignment:
Q  109 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 197  Q
    ||||||||||||||||||||||||||   |||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11548386 aaaatgctagatatcaagaatgatttatcaagaacgattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 11548474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 262
Target Start/End: Complemental strand, 29693716 - 29693552
Alignment:
Q  107 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||| |||||| ||| |||||||||||||| ||||||||  |||||    
T  29693716 ggaaaatgctagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatgacccttagatttcagtcttatttattatcctttc 29693617  T
Q  206 at--------nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||                 ||||||||| ||||||||||||||||||||||||||||||||||||    
T  29693616 ataaaaaataaaaataaaatacataacatccaccaccccatgatttccggccaggctgagatttt 29693552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 148 - 250
Target Start/End: Complemental strand, 6127506 - 6127402
Alignment:
Q  148 caagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc--atnnnnnnnnntacataacacccaccaccccatgatttcc 245  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||         ||||||||||||||||||||||||||||     
T  6127506 caagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttcatataaaaaaaaatacataacacccaccaccccatgatttct 6127407  T
Q  246 ggcca 250  Q
    |||||    
T  6127406 ggcca 6127402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 262
Target Start/End: Original strand, 9752109 - 9752196
Alignment:
Q  175 tttagatttcagtctcatttattaatctttcatnnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||||||||||||||||| |||||||         ||||||||||||| ||||||||||||||||||||||||||||||||    
T  9752109 tttagatttcagtctcatttattaacctttcataaaaaaaaatacataacacccatcaccccatgatttccggccaggctgagatttt 9752196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 582520 - 582602
Alignment:
Q  105 atggaaaatgctagatatcaagaatgatttta-taagaaaaattcaagaatgacat-ggcacaataatcacctttagatttca 185  Q
    |||||||||| ||||||||||||||||||||| ||||||||||| |||||||| || |||| |||||||||| ||||||||||    
T  582520 atggaaaatgttagatatcaagaatgattttattaagaaaaatttaagaatgatatgggcagaataatcaccattagatttca 582602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 33695388 - 33695315
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  33695388 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 33695315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 33696700 - 33696773
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  33696700 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 33696773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 34238883 - 34238948
Alignment:
Q  108 gaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcac 173  Q
    |||||||||||||||||||||||||||||| |  || |||||||||||||||| ||||||||||||    
T  34238883 gaaaatgctagatatcaagaatgattttatcaagaagattcaagaatgacatgacacaataatcac 34238948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 8515567 - 8515677
Alignment:
Q  152 aatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcatnnnnnnnnntacataacacccaccaccccatgatttccggccag 251  Q
    |||||||||| | |||||||||  |||||||||||||| |||||||||  ||||||         ||||||||| ||||||||||||||||||||  |||    
T  8515567 aatgacatggtagaataatcactcttagatttcagtcttatttattaacatttcataaaaaaaaatacataacatccaccaccccatgatttccgatcag 8515666  T
Q  252 gctgagatttt 262  Q
    |||||||||||    
T  8515667 gctgagatttt 8515677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 6127279 - 6127352
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  6127279 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 6127352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 23291145 - 23291072
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  23291145 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 23291072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 25987089 - 25987044
Alignment:
Q  217 tacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  25987089 tacataacacccaccaccccatgatttccggccagactgagatttt 25987044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 11548647 - 11548576
Alignment:
Q  113 tgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||| ||||||||||  ||||| | |||||||||||||||||||||||||| |||||||||| ||||||||    
T  11548647 tgctatatatcaagaaaaattttctcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 11548576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 25986934 - 25986997
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcac 173  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||    
T  25986934 aatgctatatatcaagaaagattttattaagaaaatttcaagaatgacatggcaaaataatcac 25986997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 2121002 - 2121059
Alignment:
Q  105 atggaaaatgctagatatcaagaatgattttataagaaaa-attcaagaatgacatgg 161  Q
    |||||||||| |||||||||| ||||||||||||| |||| |||||||||||||||||    
T  2121002 atggaaaatgttagatatcaaaaatgattttataaaaaaagattcaagaatgacatgg 2121059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 17176082 - 17176009
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| || |||| ||||||||||||||| || |||||||||| ||||||||    
T  17176082 aatgctatatatcaagaaagattttatcaataaaatttcaagaatgacatgacagaataatcacccttagattt 17176009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 17705526 - 17705453
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||||| ||||||||    
T  17705526 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatcacccttagattt 17705453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 18365634 - 18365561
Alignment:
Q  111 aatgctagatatcaagaatgattttataagaaaaatt-caagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| | ||||||| |||||||||||||||| |||||||||| ||| ||||    
T  18365634 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaattt 18365561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 18370898 - 18370825
Alignment:
Q  111 aatgctagatatcaagaatgattttataagaaaaatt-caagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| | ||||||| |||||||||||||||| |||||||||| ||| ||||    
T  18370898 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaattt 18370825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 28675152 - 28675225
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| |  |||||||||| ||||||||    
T  28675152 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgtcggaataatcacccttagattt 28675225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 18889757 - 18889685
Alignment:
Q  111 aatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||   ||||||| |||||||||||||||||| |||||| ||| ||||||||    
T  18889757 aatgctatatatcaagaaagatttatcaagaaaatttcaagaatgacatggcagaataataacccttagattt 18889685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 9752278 - 9752233
Alignment:
Q  138 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||||||||||||||| |||||| |||||||||| ||||||||    
T  9752278 aagaaaaattcaagaatgatatggcagaataatcacccttagattt 9752233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 8515786 - 8515723
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcac 173  Q
    ||||||| |||||||||| |||||||| |||| | ||| ||||||||||||||| |||||||||    
T  8515786 aatgctatatatcaagaaagattttatcaagacagatttaagaatgacatggcagaataatcac 8515723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 32702217 - 32702282
Alignment:
Q  119 atatcaagaatgattttataa-gaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    |||||||||| |||||| | | ||||| ||||||||||| |||||| |||||||||| ||||||||    
T  32702217 atatcaagaaagattttttcatgaaaatttcaagaatgatatggcagaataatcacccttagattt 32702282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 104 - 262
Target Start/End: Complemental strand, 4669 - 4510
Alignment:
Q  104 aatggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 203  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4669 aatggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgatatggcacaataatcacctttagatttcagtctcatttattaatctt 4570  T
Q  204 tcat-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||||          ||||||||||||||||||||||||||| ||||||||||||||||||    
T  4569 tcataaaaaacagatacataacacccaccaccccatgattttcggccaggctgagatttt 4510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 4400 - 4473
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  4400 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 4473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 106 - 262
Target Start/End: Complemental strand, 11892 - 11735
Alignment:
Q  106 tggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 205  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11892 tggaaaatgttagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 11793  T
Q  206 at-nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
    ||          |||||||||| |||||||||||||||| ||||||||||||||||||    
T  11792 ataaaaaaaaaatacataacactcaccaccccatgattttcggccaggctgagatttt 11735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 11625 - 11698
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  11625 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 11698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 109 - 262
Target Start/End: Complemental strand, 13110 - 12956
Alignment:
Q  109 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat- 207  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||     
T  13110 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttcata 13011  T
Q  208 nnnnnnnnntacataacacccaccaccccatgatttccggccaggctgagatttt 262  Q
             ||||||||| ||||||||||||||||||||||||||||||||||||    
T  13010 aaaaaaagatacataacatccaccaccccatgatttccggccaggctgagatttt 12956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 12846 - 12919
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||| | ||||||||    
T  12846 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcatccttagattt 12919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 3072 - 3145
Alignment:
Q  111 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 183  Q
    ||||||| |||||||||| |||||||| || |||| || ||||||||||||||| |||||||||| ||||||||    
T  3072 aatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatcacccttagattt 3145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 85643 - 85577
Alignment:
Q  106 tggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcac 173  Q
    ||||||||||||||||||||||||||||| ||  |||| ||| || ||| ||||||||||||||||||    
T  85643 tggaaaatgctagatatcaagaatgatttgat-tgaaagattaaaaaataacatggcacaataatcac 85577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University