View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2263_low_5 (Length: 238)
Name: NF2263_low_5
Description: NF2263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2263_low_5 |
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Alignment Details
Target: chr3 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 99 - 220
Target Start/End: Original strand, 2443331 - 2443452
Alignment:
| Q |
99 |
ccaggacagctcacatccgaaccccaaagacaagacagcaaccaaccttaaaaagcagttgacgcatgtattttcaatctactcaaactctaatgcaaag |
198 |
Q |
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| T |
2443331 |
ccaggacagctcacatccgaaccccaaagacaagacagcaaccaaccttaaaaagcagttgacgcatgtattttcaatctactcaaactctaatgcaaag |
2443430 |
T |
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| Q |
199 |
ataacacttttatcccatcaat |
220 |
Q |
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|||||||||||||||||||||| |
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| T |
2443431 |
ataacacttttatcccatcaat |
2443452 |
T |
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