View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2264_high_17 (Length: 249)
Name: NF2264_high_17
Description: NF2264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2264_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 42274975 - 42274741
Alignment:
| Q |
1 |
tttcatattactattattgtttattggttttggagtaattatgttattgtcctattgagcttattagttagttgggtttgttacttggaggtaatgactg |
100 |
Q |
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| T |
42274975 |
tttcatattactattattgtttattggttttggagt---tatgttattgtcctattgagcttattagttagttgggtttgttacttggaggcaatgactg |
42274879 |
T |
|
| Q |
101 |
cttcaagccaacgcaatggtcgacatggcttaagataaggttttaataattgaagggtgcgtaaagtgtacaagatcattagatagtcacagaacttacc |
200 |
Q |
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| T |
42274878 |
cttcaagccaacgcaatggtcgacaatgcttaagataaggttttaataattgaagggtgcgtaaagtgtacaagatcattagatagtcacagaacttacc |
42274779 |
T |
|
| Q |
201 |
aataaaatcacctttgaagagaaagtaaacgtgatatt |
238 |
Q |
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||||||||||||||||| |||||||||||||||||||| |
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| T |
42274778 |
aataaaatcacctttgaggagaaagtaaacgtgatatt |
42274741 |
T |
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