View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2264_high_5 (Length: 442)
Name: NF2264_high_5
Description: NF2264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2264_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 37 - 406
Target Start/End: Original strand, 37204254 - 37204622
Alignment:
| Q |
37 |
actctttaaagagggcgatcatttgtgctaatttaatggctctgctctaaaagtgcattttaatggtctccattcgtggaatcaagttactgctagtatc |
136 |
Q |
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| T |
37204254 |
actctttaaagagggcgatcatttgtgctaacttaatggctctgctctaaaagtgcattttaatggtctgcattggtggaatcaagtcactgctagtatc |
37204353 |
T |
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| Q |
137 |
tctggtgagtggtgactatcataaaaataaattgggtctcacaagatattaatttgtacctagtttggtaccacctacatctctaaatacaggatgccat |
236 |
Q |
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| T |
37204354 |
tctggt-------gactatcataaaaataaattgggtctcacaagatattaatttgtacctagtttggtaccacctacatctctaaatacaggatgccat |
37204446 |
T |
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| Q |
237 |
cgagtatattgctggaattaataaagttgttcgtttataatattaactttgttgaaagttgatattatttttacaa---------attcaag-nnnnnnn |
326 |
Q |
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| T |
37204447 |
cgagtatattgctggaattaataaagtt----gtttataatattaactttgttgaaagttgatataatttttacaaatttatatcattcaagaaaaaaaa |
37204542 |
T |
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| Q |
327 |
nnttgattaatgtttttattaaagtatgacttaaatatgtttttagttcccaaaatataccaattttaatttttagtcca |
406 |
Q |
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| T |
37204543 |
agttgattaatgtttttattaaagtatgacttaaatatgtttttagttccctaaatataccaattttcatttttagtcca |
37204622 |
T |
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