View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2264_low_9 (Length: 374)
Name: NF2264_low_9
Description: NF2264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2264_low_9 |
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Alignment Details
Target: chr5 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 86 - 359
Target Start/End: Original strand, 36156810 - 36157083
Alignment:
| Q |
86 |
ttggttgcaatttacacttaatcggaactttcactccaattttttattgcttgtcccactgcttgtttcacagcttgtgcatcaatagtatcaccttgtt |
185 |
Q |
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| T |
36156810 |
ttggttgcaatttacacttaatcggaactttcactccaattttttattgcttgtcccactgcttgtttcacagcttgtgcatcaatagtatcaccttgtt |
36156909 |
T |
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| Q |
186 |
cttcattctacatatgtcacaaaaaatttccgtcattctcatgcatgatgggaaataaaatgcaagatatattccttattgatgaacttagctggcttct |
285 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36156910 |
cttcattctacatatgtcacaaaaaatttccgtcattctcatgcatgatgggaaataaaatgcaagatatattccttattgatgaacttagctggcttct |
36157009 |
T |
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| Q |
286 |
atacgtagtagacaattaaatgaagactatatatattattattagggttaagattaggcatcatatatgaattg |
359 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36157010 |
atacgtagtagacaattaaatgaagactatatatattattattagggttaagattaggcatcatatatgaattg |
36157083 |
T |
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