View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2265_low_2 (Length: 373)
Name: NF2265_low_2
Description: NF2265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2265_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 35 - 371
Target Start/End: Complemental strand, 42928712 - 42928376
Alignment:
| Q |
35 |
atgaactgtgatgtatatttatcttattatattcaagcatatataatacaggtcgttaannnnnnnnatgatatacagtctgttcattagctccaaaaca |
134 |
Q |
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| T |
42928712 |
atgaactgtgatgtatatttatcttattatattcaagcatatataatacaggtcgttaattttttttatgacatacagtctgttcattagctccaaaaca |
42928613 |
T |
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| Q |
135 |
ttgagtnnnnnnnnttagctacaaaactttctgtaaaaaattggacatcatagctataattagaactacaatttcatttctatacattaacaatgtacca |
234 |
Q |
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| T |
42928612 |
ttgagtaagaaaaattagctacaaaactttctgtaaaaaattggacatcatagctataattagaactacaatttcatttctatacattaacaatgtaccc |
42928513 |
T |
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| Q |
235 |
attatagaactaggtaattttgatgttctaatacaatagtagaaaatctcaaaatggcagtgcaaggtagaaaatgacttgcctgtcttcttagctcaac |
334 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42928512 |
attatagaaccaggtaattttgatgttctaatacaatagtagaaaatctcaaaatggcagtgcaaggtagaaaatgacttgcctgtcttcttagctcaac |
42928413 |
T |
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| Q |
335 |
aaagttgtggaagccttcaacgagaaatgaagactga |
371 |
Q |
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|||||||||| |||||||||| ||||||||||||||| |
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| T |
42928412 |
aaagttgtggcagccttcaacaagaaatgaagactga |
42928376 |
T |
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