View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2267_low_8 (Length: 241)
Name: NF2267_low_8
Description: NF2267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2267_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 35909016 - 35909228
Alignment:
| Q |
19 |
gcttccgcatacttgaaggttcttgcagaatcataagattttctttacatcttcgttgcaatttttcataattgctttttattcacaacaatttcttgtt |
118 |
Q |
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| T |
35909016 |
gcttccgcatacttgaaggttcttgcagaatcataagattttctttacatcttcgttgcaatttttcataattgctttttattcacaacaatttcttgtt |
35909115 |
T |
|
| Q |
119 |
gattcatcgttttcttagattttatagattcttgagcttcatttcgagttttcatggcatgcaacatcaatgtttccaccagtcatgcttagagcaatgt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35909116 |
gattcatcgttttcttagattttatagattcttgagcttcatatcgagttttcatggcatgcaacatcaatgtttccaccagtcatgcttagagcaatgt |
35909215 |
T |
|
| Q |
219 |
tatctctgctcct |
231 |
Q |
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|||| ||| |||| |
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| T |
35909216 |
tatcactgatcct |
35909228 |
T |
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