View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2269_high_21 (Length: 236)
Name: NF2269_high_21
Description: NF2269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2269_high_21 |
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Alignment Details
Target: chr4 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 41 - 220
Target Start/End: Original strand, 46696656 - 46696835
Alignment:
| Q |
41 |
tgaataaaacttatgtatccttcaccactttatataaaatttatttttaaagtgtaatacacaggtaaatttgatataaaagttggtgttagagaaactg |
140 |
Q |
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| T |
46696656 |
tgaataaaacttatgtatctctcaccactttatataaaatttatttttaaagtgtaatacacacgtaaatttgatataaaagttggtgttagagaaactg |
46696755 |
T |
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| Q |
141 |
ataaaacaagggtgttcgtaccactttcttaaatgcataaaaagcgagcaatcaaatctatttataaaaacatcatctgt |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46696756 |
ataaaacaagggtgttcgtaccactttcttaaatgcataaaaagcgagcaatcaaatctatttataaaaacatcatctgt |
46696835 |
T |
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