View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2269_low_3 (Length: 679)

Name: NF2269_low_3
Description: NF2269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2269_low_3
NF2269_low_3
[»] chr1 (5 HSPs)
chr1 (8-657)||(40804905-40805555)
chr1 (545-652)||(31915122-31915229)
chr1 (101-145)||(39504093-39504137)
chr1 (547-660)||(13442025-13442141)
chr1 (546-599)||(10927747-10927800)
[»] chr4 (7 HSPs)
chr4 (233-407)||(25946420-25946594)
chr4 (235-409)||(25924781-25924955)
chr4 (412-538)||(25946719-25946845)
chr4 (412-542)||(25925069-25925199)
chr4 (544-646)||(10494507-10494609)
chr4 (141-231)||(25945996-25946086)
chr4 (167-231)||(25924251-25924315)
[»] scaffold0024 (2 HSPs)
scaffold0024 (544-660)||(144293-144409)
scaffold0024 (544-660)||(145315-145431)
[»] chr2 (2 HSPs)
chr2 (567-660)||(280399-280492)
chr2 (567-658)||(32162354-32162448)
[»] chr3 (2 HSPs)
chr3 (544-660)||(8536769-8536885)
chr3 (567-659)||(43304322-43304414)
[»] chr8 (2 HSPs)
chr8 (544-663)||(2688757-2688875)
chr8 (546-599)||(23573175-23573228)
[»] chr5 (1 HSPs)
chr5 (544-646)||(18252003-18252105)
[»] chr7 (3 HSPs)
chr7 (561-660)||(1217596-1217695)
chr7 (544-610)||(11228246-11228312)
chr7 (586-653)||(11001257-11001324)
[»] chr6 (1 HSPs)
chr6 (546-611)||(34374225-34374290)


Alignment Details
Target: chr1 (Bit Score: 599; Significance: 0; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 599; E-Value: 0
Query Start/End: Original strand, 8 - 657
Target Start/End: Original strand, 40804905 - 40805555
Alignment:
Q  8 gacatcatcaacaaaaacaatcagaatagggaaggtggaccaatttgtgttccacatgatggagacaatcgaatt-ttgaggattcgagttcttaagaag 106  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  40804905 gacatcatcaacaaaaacaatcagaacaggaaaggtggaccaatttgggttccacatgatggagacaatcgaattattgaggattcgagttcttacgaag 40805004  T
Q  107 aaaagatagcgactgcaaccaaaaagggtgcggatgttcaaatagcttatgaggttatagaacaatttcctaatcacaaaattgggattaccaatgaaat 206  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40805005 aaaagatagcgaccgcaaccaaaaagggtgcggatgttcaaatagcttatgaggttatagaacaatttcctaatcacaaaattgggattaccaatgaaat 40805104  T
Q  207 catccacaacacaattgttaataagtgcctagaggagatgaaagtggagaatattcctattgccgaaggaaagaagcaatttgagtttgtcaacaagggt 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40805105 catccacaacacaattgttaataagtgcctagaggagatgaaagtggagaatattcctattgccgaaggaaagaagcaatttgagtttgtcaacaagggt 40805204  T
Q  307 gatgtagtcatgttgcctacttttggagctgtagtcgatgggatgttgactttaagtgagaaaaatgttcaaattgttgatacaacttgtgagtgggttt 406  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40805205 gatgtagtcatgttgcctgcttttggagctgtagtcgatgagatgttgactttaagtgagaaaaatgttcaaattgttgatacaacttgtgagtgggttt 40805304  T
Q  407 caacagtatggaatattgtcaagaagcacaaaagagaagattacacctcgataattcatggtaaatatgcccataagaaaactgtcgcaactatgtcttt 506  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40805305 caacagtatggaatattgtcgagaagcacaaaagagaagattacacctcgataattcatggtaaatatgcccaaaagaaaactgtcgcaactatgtcttt 40805404  T
Q  507 tgctggaaagtacgtaattatgaaaaatatggcagacgctaaaatgatggatttagaatgtattcagcatgctactacatttcttcaatgggacaaagac 606  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40805405 tgctgaaaagtacgtaattatgaaaaatatggcagacgctaaaatgatggatttagaatgtattcagcatgctactacatttcttcaatgggataaagac 40805504  T
Q  607 aactgctatattctccaaatcaaatcatctttgcatttcattcaatgagat 657  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40805505 aactgctatattctccaaatcaaatcatctttgcatttcattcaatgagat 40805555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 545 - 652
Target Start/End: Original strand, 31915122 - 31915229
Alignment:
Q  545 ctaaaatgatggatttagaatgtattcagcatgctactacatttcttcaatgggacaaagacaactgctatattctccaaatcaaatcatctttgcattt 644  Q
    |||||||||||||| |||||  |||||||||||||||| |||||||||||||||| |||| ||||  | ||||| | |||| |||| |||||||  ||||    
T  31915122 ctaaaatgatggatctagaaaatattcagcatgctactgcatttcttcaatgggataaaggcaacatcaatattttacaaaccaaaccatctttagattt 31915221  T
Q  645 cattcaat 652  Q
    || |||||    
T  31915222 cactcaat 31915229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 39504093 - 39504137
Alignment:
Q  101 aagaagaaaagatagcgactgcaaccaaaaagggtgcggatgttc 145  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||    
T  39504093 aagaagaaaagatagtgactgcaaccaaaaagggtgcggctgttc 39504137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 660
Target Start/End: Complemental strand, 13442141 - 13442025
Alignment:
Q  547 aaaatgatggatttagaatgtattcagcatgct---actacatttcttcaatgggacaaagacaactgctatattctccaaatcaaatcatctttgcatt 643  Q
    |||||||||||| ||||| ||||||  ||||||   |||||||||||||||||| | ||||  ||||| | |||| | |||| ||||  |||||||||||    
T  13442141 aaaatgatggatctagaaagtattcgacatgctgctactacatttcttcaatggtataaaggaaactgttttatttttcaaaccaaactatctttgcatt 13442042  T
Q  644 tcattcaatgagatcca 660  Q
    ||| |||||| ||||||    
T  13442041 tcactcaatgggatcca 13442025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 546 - 599
Target Start/End: Original strand, 10927747 - 10927800
Alignment:
Q  546 taaaatgatggatttagaatgtattcagcatgctactacatttcttcaatggga 599  Q
    |||||||  |||| ||||| |||||| ||||| |||||||||||||||||||||    
T  10927747 taaaatggaggatctagaaagtattcggcatgttactacatttcttcaatggga 10927800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 1e-67; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 233 - 407
Target Start/End: Original strand, 25946420 - 25946594
Alignment:
Q  233 gcctagaggagatgaaagtggagaatattcctattgccgaaggaaagaagcaatttgagtttgtcaacaagggtgatgtagtcatgttgcctacttttgg 332  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||| |||||| |||||||    
T  25946420 gcctagaggagatgaaagtggagaatattcctattgcagaaggaaagaaacaatttgaggttgtcaacaagggtgatgtagtcattttgcctgcttttgg 25946519  T
Q  333 agctgtagtcgatgggatgttgactttaagtgagaaaaatgttcaaattgttgatacaacttgtgagtgggtttc 407  Q
    ||| | |||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||    
T  25946520 agccgcagtcgatgagatgttgactttgagtgagaaaaaagttcaaattgttgatacaacttgcgagtgggtttc 25946594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 235 - 409
Target Start/End: Original strand, 25924781 - 25924955
Alignment:
Q  235 ctagaggagatgaaagtggagaatattcctattgccgaaggaaagaagcaatttgagtttgtcaacaagggtgatgtagtcatgttgcctacttttggag 334  Q
    |||||||| ||| ||||  |||||||||||||||  ||||| ||||| ||||||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  25924781 ctagaggatatggaagtacagaatattcctattggagaagggaagaaacaatttgaggttgtcaacaagggtgatgtagtcatattgcctgcttttggag 25924880  T
Q  335 ctgtagtcgatgggatgttgactttaagtgagaaaaatgttcaaattgttgatacaacttgtgagtgggtttcaa 409  Q
    ||| ||| || | |||||||||||| |||||||||||||||||||| ||||||||||||||   |||||||||||    
T  25924881 ctgcagttgacgagatgttgactttgagtgagaaaaatgttcaaatcgttgatacaacttgcccgtgggtttcaa 25924955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 412 - 538
Target Start/End: Original strand, 25946719 - 25946845
Alignment:
Q  412 gtatggaatattgtcaagaagcacaaaagagaagattacacctcgataattcatggtaaatatgcccataagaaaactgtcgcaactatgtcttttgctg 511  Q
    ||||||||| ||||| |||||||||||| || |||||| |||||||||||||||||||||||||||||  || ||||||||||||||  |||||||||||    
T  25946719 gtatggaatgttgtcgagaagcacaaaaaaggagattatacctcgataattcatggtaaatatgcccacgaggaaactgtcgcaactgcgtcttttgctg 25946818  T
Q  512 gaaagtacgtaattatgaaaaatatgg 538  Q
    |||| ||| ||||| | ||||||||||    
T  25946819 gaaaatacataattgtaaaaaatatgg 25946845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 412 - 542
Target Start/End: Original strand, 25925069 - 25925199
Alignment:
Q  412 gtatggaatattgtcaagaagcacaaaagagaagattacacctcgataattcatggtaaatatgcccataagaaaactgtcgcaactatgtcttttgctg 511  Q
    ||||||||| ||||  | |||||||||| || ||| || |||||||||||||||||||||||||||||| || |||| || ||||||   ||||||||||    
T  25925069 gtatggaatgttgttgaaaagcacaaaaaaggagactatacctcgataattcatggtaaatatgcccatgaggaaaccgtagcaactgcatcttttgctg 25925168  T
Q  512 gaaagtacgtaattatgaaaaatatggcaga 542  Q
    | |||||| ||||| ||||||||||||||||    
T  25925169 ggaagtacataattgtgaaaaatatggcaga 25925199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 544 - 646
Target Start/End: Original strand, 10494507 - 10494609
Alignment:
Q  544 gctaaaatgatggatttagaatgtattcagcatgctactacatttcttcaatgggacaaagacaactgctatattctccaaatcaaatcatctttgcatt 643  Q
    ||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||| || | ||||||||||||| |  ||| ||||  |||||||||||    
T  10494507 gctaaaatgatggatctagaaagtactcagcatgcttctacatttcttcaatgggataagggcaactgctatattttttaaaccaaactatctttgcatt 10494606  T
Q  644 tca 646  Q
    |||    
T  10494607 tca 10494609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 25945996 - 25946086
Alignment:
Q  141 tgttcaaatagcttatgaggttatagaacaatttcctaatcacaaaattgggattaccaatgaaatcatccacaacacaattgttaataag 231  Q
    |||||| || ||||||||||  | | |||| |||||||||||||||||| ||||||||||| |||||||||||||| ||| ||||||||||    
T  25945996 tgttcagattgcttatgaggccagaaaacagtttcctaatcacaaaatttggattaccaatcaaatcatccacaacccaactgttaataag 25946086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 25924251 - 25924315
Alignment:
Q  167 aacaatttcctaatcacaaaattgggattaccaatgaaatcatccacaacacaattgttaataag 231  Q
    ||||||||||| || | |||||| |||||||||||||||| ||||| ||| ||| ||||||||||    
T  25924251 aacaatttcctgatgaaaaaatttggattaccaatgaaattatccataacccaactgttaataag 25924315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 544 - 660
Target Start/End: Complemental strand, 144409 - 144293
Alignment:
Q  544 gctaaaatgatggatttagaatgtattcagcatgctactacatttcttcaatgggacaaagacaactgctatattctccaaatcaaatcatctttgcatt 643  Q
    ||||||||||||||||||||  |||||| ||||||||||||||||||||||||||| |||| ||||| ||||||| | ||||||||| ||||||||||||    
T  144409 gctaaaatgatggatttagagcgtattcggcatgctactacatttcttcaatgggataaaggcaactactatatttttcaaatcaaaccatctttgcatt 144310  T
Q  644 tcattcaatgagatcca 660  Q
    |||||||||| ||||||    
T  144309 tcattcaatgggatcca 144293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 544 - 660
Target Start/End: Original strand, 145315 - 145431
Alignment:
Q  544 gctaaaatgatggatttagaatgtattcagcatgctactacatttcttcaatgggacaaagacaactgctatattctccaaatcaaatcatctttgcatt 643  Q
    ||||||||||||||||||||  |||||| |||||||| |||||||||| ||||||| |||| ||||||||||||| | ||||||||| ||| |||| |||    
T  145315 gctaaaatgatggatttagagcgtattcggcatgctattacatttctttaatgggataaaggcaactgctatatttttcaaatcaaaccatatttgtatt 145414  T
Q  644 tcattcaatgagatcca 660  Q
    | | |||||| ||||||    
T  145415 ttactcaatgggatcca 145431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 5e-24; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 567 - 660
Target Start/End: Complemental strand, 280492 - 280399
Alignment:
Q  567 tattcagcatgctactacatttcttcaatgggacaaagacaactgctatattctccaaatcaaatcatctttgcatttcattcaatgagatcca 660  Q
    ||||||||||||||||||||||||||||||| | |||  ||||||||||||| ||||||||||| ||||| ||||||||| |||||| ||||||    
T  280492 tattcagcatgctactacatttcttcaatggcataaaagcaactgctatattttccaaatcaaaccatctatgcatttcactcaatgggatcca 280399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 567 - 658
Target Start/End: Complemental strand, 32162448 - 32162354
Alignment:
Q  567 tattcagcatgctactacatttcttc---aatgggacaaagacaactgctatattctccaaatcaaatcatctttgcatttcattcaatgagatc 658  Q
    ||||||||||||||||||||||||||   ||||| | |||| ||||| ||||||| |||||| |||| ||||||  ||||||| |||||| ||||    
T  32162448 tattcagcatgctactacatttcttcaaaaatggcataaaggcaactactatattttccaaagcaaaccatcttctcatttcactcaatgggatc 32162354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 660
Target Start/End: Complemental strand, 8536885 - 8536769
Alignment:
Q  544 gctaaaatgatggatttagaatgtattcagcatgctactacatttcttcaatgggacaaagacaactgctatattctccaaatcaaatcatctttgcatt 643  Q
    ||||||||||||||||||||  |||||||||||| ||||| ||||||||||||| | |||| ||||||||||| | |  |||  ||| ||||||||||||    
T  8536885 gctaaaatgatggatttagagagtattcagcatgttactatatttcttcaatggcataaaggcaactgctatagtttttaaacgaaaccatctttgcatt 8536786  T
Q  644 tcattcaatgagatcca 660  Q
    | | |||||| ||||||    
T  8536785 ttactcaatgggatcca 8536769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 567 - 659
Target Start/End: Complemental strand, 43304414 - 43304322
Alignment:
Q  567 tattcagcatgctactacatttcttcaatgggacaaagacaactgctatattctccaaatcaaatcatctttgcatttcattcaatgagatcc 659  Q
    |||||||||||||||||||||||||||| || | |||| |||||| |||||| | |||| ||||  ||||| |||||||| |||||| |||||    
T  43304414 tattcagcatgctactacatttcttcaacggaataaagtcaactgttatatttttcaaaccaaacaatcttggcatttcactcaatgggatcc 43304322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 544 - 663
Target Start/End: Original strand, 2688757 - 2688875
Alignment:
Q  544 gctaaaatgatggatttagaatgtattcagcatgctactacatttcttcaatgggacaaagacaactgctatattctccaaatcaaatcatctttgcatt 643  Q
    ||||||||||||||| ||||| ||||||| ||||| |||| || |||||||||||| |||| ||||| ||||||| || || | ||| ||||||| ||||    
T  2688757 gctaaaatgatggatctagaaagtattcaacatgcaactatatctcttcaatgggataaaggcaactactatattttcgaact-aaaccatcttttcatt 2688855  T
Q  644 tcattcaatgagatccatga 663  Q
    |||  ||||| |||||||||    
T  2688856 tcacccaatgggatccatga 2688875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 546 - 599
Target Start/End: Original strand, 23573175 - 23573228
Alignment:
Q  546 taaaatgatggatttagaatgtattcagcatgctactacatttcttcaatggga 599  Q
    ||||||||||||| ||||| |||| | ||||||||| |||||| ||||||||||    
T  23573175 taaaatgatggatctagaaagtatccggcatgctaccacattttttcaatggga 23573228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 544 - 646
Target Start/End: Original strand, 18252003 - 18252105
Alignment:
Q  544 gctaaaatgatggatttagaatgtattcagcatgctactacatttcttcaatgggacaaagacaactgctatattctccaaatcaaatcatctttgcatt 643  Q
    ||||||||||||||| | ||  ||||||   |||||||||||||| |||||| ||| ||||| |||||||||||| | |||| |||| ||||||||||||    
T  18252003 gctaaaatgatggatctggatagtattcgaaatgctactacatttattcaataggataaagaaaactgctatatttttcaaaccaaaccatctttgcatt 18252102  T
Q  644 tca 646  Q
    |||    
T  18252103 tca 18252105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 561 - 660
Target Start/End: Complemental strand, 1217695 - 1217596
Alignment:
Q  561 agaatgtattcagcatgctactacatttcttcaatgggacaaagacaactgctatattctccaaatcaaatcatctttgcatttcattcaatgagatcca 660  Q
    |||| |||||| ||||| ||||||||||| ||||||||| |||| ||||||||||||| | |||| || |  |||||| |||||||||| ||| ||||||    
T  1217695 agaaagtattcggcatgatactacatttcctcaatgggataaaggcaactgctatatttttcaaaccagactatctttacatttcattctatgggatcca 1217596  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 544 - 610
Target Start/End: Original strand, 11228246 - 11228312
Alignment:
Q  544 gctaaaatgatggatttagaatgtattcagcatgctactacatttcttcaatgggacaaagacaact 610  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| |||||||| | |||| |||||    
T  11228246 gctaaaatgatggatctagaaagtatttagcatggtactacatttattcaatggcataaaggcaact 11228312  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 586 - 653
Target Start/End: Complemental strand, 11001324 - 11001257
Alignment:
Q  586 tttcttcaatgggacaaagacaactgctatattctccaaatcaaatcatctttgcatttcattcaatg 653  Q
    |||||||||||| | |||| |||||| |||||| |||||| |||| ||||||| ||||||| ||||||    
T  11001324 tttcttcaatggcataaaggcaactgttatattttccaaaacaaaccatctttacatttcactcaatg 11001257  T

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Target: chr6 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 546 - 611
Target Start/End: Complemental strand, 34374290 - 34374225
Alignment:
Q  546 taaaatgatggatttagaatgtattcagcatgctactacatttcttcaatgggacaaagacaactg 611  Q
    ||||||||||||| || ||||||| ||||||||||||||||||  ||||||| | |||| ||||||    
T  34374290 taaaatgatggatctataatgtatccagcatgctactacattttctcaatggtataaaggcaactg 34374225  T

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