View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2270_high_20 (Length: 298)
Name: NF2270_high_20
Description: NF2270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2270_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 44851504 - 44851217
Alignment:
| Q |
1 |
ttgaaaggatcttcttggtctataatgatgtcctctgagcagtgtgttgtagattgtaagtaatgaaaattttcttcatttgtaacttgatcactactac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44851504 |
ttgaaaggatcttcttggtctataatgatgtcctctgagcagtgtgttgtagattgtaagtaatgaaaattttcttcatttgtaacttgatcactactac |
44851405 |
T |
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| Q |
101 |
tcacagtgctcttattactgttaatctcctcttctacctgtttctgttcttggttttcttccttagaagtaactgggagatctttggttgtttcggtttt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44851404 |
tcacagtgctcttattactgttaatctcctcttctacctgtttttgttcttggttttcttccttagaagtaactgggagatctttggttgtttcggtttt |
44851305 |
T |
|
| Q |
201 |
ggattcttttggttgttgagctaaatttgtggtggaggagagggcagtgggatctggatggttatgtgttgaagtataggtgatgatg |
288 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44851304 |
ggattcttttggttgttgagctaaatttgtggtggaggagagggcagtgggatctggatggttatgtgttgaagtataggtgatgatg |
44851217 |
T |
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