View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2270_high_21 (Length: 291)
Name: NF2270_high_21
Description: NF2270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2270_high_21 |
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Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 13 - 276
Target Start/End: Original strand, 36743697 - 36743960
Alignment:
| Q |
13 |
aatatcgcaaggaccgaattttctttgccaataaggtaccaaacaactttaactttactatttttaacttcggtatcaaaataacttttaagctcnnnnn |
112 |
Q |
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| T |
36743697 |
aatatcgcaaggaccgaattttctttgccaataaggtaccaaacaactttaactttattatttttaacttcggtatcaaaataacttttaagctcaaaaa |
36743796 |
T |
|
| Q |
113 |
nngttgggccaaacacaccctatgtttagttaatatgtgtcgcgatgattgaaagaatagtcatgttatgtaattatttatgttgcagccataccttcca |
212 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36743797 |
aagtcgggccaaacacaccctatgtttagttaatatgtgtcgcgatgattgaaagaatagtcatgttatgtaattatttatgttgcagccataccttcca |
36743896 |
T |
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| Q |
213 |
catgaaatgccagctccactagttaactacagacatgtagaattggatactttaaggggagatg |
276 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36743897 |
catgaaatgccagctccactagttaactacagacatgtagaattggatactttaaggggagatg |
36743960 |
T |
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