View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2270_low_18 (Length: 310)
Name: NF2270_low_18
Description: NF2270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2270_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 9 - 291
Target Start/End: Complemental strand, 25622963 - 25622681
Alignment:
| Q |
9 |
gtagcataggtggaggaaattgccgtggacgacggctggataactgttgtaccgtttggttttgtgcatgaaataacgtcgttggtcgttggcttggtta |
108 |
Q |
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| T |
25622963 |
gtagcattggtggaggaaattgccgtggacgacggctggataactgttgtaccgtttggttttgtgcatgaaataacgtcgttggtcgttggcttggtta |
25622864 |
T |
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| Q |
109 |
agtctagagagcctaataacattgtgtccattttggtaatactttggtttttatgatcacaagtttggtttaaaagagaaagaaagagaacaaatatgaa |
208 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25622863 |
agtctaaagagcctaataacattgtgtccattttggtaatactttggtttttatgatcacaagtttggtttaaaagagaaagaaagagaacaaatatgaa |
25622764 |
T |
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| Q |
209 |
gatttttgatgttgttgaatggtgtttgaagttagaaccgggaagatccttatataatatatacaaagagtgaactcacttgg |
291 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
25622763 |
gatttttgatgttgttgaatggtgtttgaagttagaaccgggaagatccttatataatatatacaaagagtaaactcacttgg |
25622681 |
T |
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